Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0011095

Physical Location & Seq

Genomic Coordinates Reverse (-)

61001378 .. 61005570

Gene Structure 4193 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00267860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGATTGCGGTTCGGTTTCTCGAGAGAGTGCCGTTTATGCTGGTGGAGTCGTCGGAGCTGCTGAAGCAGCTCGAGACCGACGCCAAGGCCTCGCCGGAGGAGAAGCTGGCGCTGCGGGAGGCGGGCGGAGAGAACGGGGGGATTCTGGCGGTGGAGATGGCGCTGAGGTCGATGGCGGAGGAGAACGGCGGCGTTATCCTCGAGGAGTACGCGGTCAACGGAAAGTCAAGGGTTACGGTGAGGGACATTGACCGGACTAGGCTGATGAAGGAGTTGCCGGAGAGCAAGCAAGATTCGATTGTGGATGGGAATGGGAATTTCAATCAGAGTAGTGGCGTGGATGGTGGGAATAACAATGGAGGAGGGTTTGTGGGGAGAGGTGGGCCGTGGGTGGTTGGGCCGGAGCCCTACATGAGCGGGTTGCCGCCATTGTTTCCGGGGATAGGTCCGAGAGGGAGAGGGATGATAGGAATGCCGAGAGGGATGATTGGGTCTCCAATGCATAGGCCTAGTATGGGGCAGAATGGTGGAATGGTGGTCAGTCCCAATGGAATGCCGAATAAAAGCATGAAGAGTGAAGAGGAAGAGATGAAGGATCTTGAGGCATTGCTGAGTAAGAAGACTTATAGGGAGTTGCAGAAGTCGAAAACTGGGGAGGAGCTTTTGGACCTCATTCACAGGCCAACTGCAAAGGAGACTGCTGTGGCAAACAAGTTCAAAACTAAAGGTGGTTCACAATTGAAGGAATACTGCACCTCCCTAACGAAAGAGGACTGCCGACGTCAATCTAATTCCTTGCTCGCTTGTGAGAAGGTTCATTTTAGGCGCATAATTGCTCTACATACTGATGTCAACTTGGGAGACTGTTCTTTTCTAGATACTTGCCGCCACATGAAGACATGCAAGTATGTACATTATGAGCTTGATTCAACACCAGATGTGTCAAACATGTTGGCTCCCCCTAAACCATTAAAGCAGCGTGCTGAATATTGTTCTGAGGTAGAACTTGGTCAACCACAATGGATTAACTGTGATATCCGCAATTTTAGAATGGATATATTGGGACAGTTCGGAGTCATAATGGCTGATCCGCCATGGGACATTCATATGGAACTGCCTTATGGGACTATGGCTGATGATGAAATGCGCACTCTTAATGTTCCTGCATTGCAGACTGATGGTCTGATTTTCCTTTGGGTCACTGGACGTGCGATGGAGCTTGGACGTGAATGTTTAGAACTTTGGGGATACAAGCGTATTGAGGAGATGATTTGGGTGAAAACTAATCAACTGCAACGAATAATTAGAACTGGGCGCACTGGCCACTGGCTAAATCATAGCAAGGAGCATTGCCTCGTTGGAATAAAAGGAGATCCATTAGTAAATAGGAATATTGATACTGATGTCATTGTTGCTGAGGTCAGAGAGACAAGTCGTAAGCCAGACGAGATGTACCCTTTGCTGGAGAGGATTAGTCCAAGGACAAGAAAGCTGGAATTGTTTGCACGCATGCACAACACTCATGCAGGGTGGATGTCACTCGGTAATCAACTGAGTGGTGTACGATTGGTTGATGAAGGCTTGCGGGCACGGTTCAAGGCTGCCTACCCAGAGGTGGAGGTGCAGCCAGCTTCCCCACCCAGAGCTTCTGCCATGGAAGTGGATTCAAATGCTGCCCAAACGAGAAGTCCATTTTCCGAAGCAAAGCCCACAGCTGCACAACTAGCAGAGGTTGCTGTTCCACAACAAGCAGAGCCTGCAGGGCCAGATGCGCCTGCTCCTGAGGGGAAGCCAACGTCTTCCACCGATGTTGACATGGCCGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008173 GO:0008174 GO:0008757 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016071 GO:0016422 GO:0016556 GO:0016604 GO:0016607 GO:0016740 GO:0016741 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0034641 GO:0034708 GO:0036396 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045293 GO:0046483 GO:0070013 GO:0071704 GO:0080009 GO:0090304 GO:0140098 GO:1901360 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MT-A70

Protein Analysis

608

Amino Acids

67.37

Weight (kDa)

5.96

Isoelectric Point (pI)

49.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MT-A70	PF05063	357 - 517	2.3e-60	MT-A70

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011095)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10760
fragaria_vesca	FvH4_5g11050 FvH4_5g11050
malus_domestica	MD06G1116900.v1.1 MD14G1124400.v1.1
prunus_persica	Prupe.5G128200_v2.0.a1
pyrus_communis	pycom06g10900
rosa_chinensis	RchiOBHm_Chr7g0186271 RchiOBHm_Chr7g0186751
rosa_laevigata	RLG00000004819
rosa_multiflora	Rmu_sc0009734.1_g000004
rosa_roxburghii	Rroxscaffold_3G00267860
rosa_rugosa	Rorug06G0473000 Rorug06G0476300
rosa_samantha	Rh7AG064200 Rh7BG080700 Rh7CG083300 Rh7DG084200
rosa_wichuraiana	Rw7G006690 Rw7G007220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	784
AbsI	CCTCGAGG	1 cut(s)	200
Acc16I	TGCGCA	1 cut(s)	1148
AccBSI	CCGCTC	1 cut(s)	417
AccII	CGCG	1 cut(s)	212
AclWI	GGATC	3 cut(s)	603, 1082, 1367
AcoI	YGGCCR	2 cut(s)	1321, 1818
AcsI	RAATTY	1 cut(s)	316
AcuI	CTGAAG	1 cut(s)	83
AcyI	GRCGYC	2 cut(s)	81, 781
AfaI	GTAC	4 cut(s)	209, 912, 1454, 1563
AfiI	CCNNNNNNNGG	4 cut(s)	443, 515, 1462, 1615
AflIII	ACRYGT	1 cut(s)	948
AgsI	TTSAA	6 cut(s)	322, 718, 742, 930, 1597, 1668
AhdI	GACNNNNNGTC	1 cut(s)	1179
AjiI	CACGTC	2 cut(s)	1208, 1226
Alw26I	GTCTC	5 cut(s)	68, 498, 689, 855, 1421
AlwI	GGATC	3 cut(s)	603, 1082, 1367
AlwNI	CAGNNNCTG	1 cut(s)	1757
Ama87I	CYCGRG	3 cut(s)	20, 71, 200
AoxI	GGCC	8 cut(s)	87, 383, 398, 506, 680, 1321, 1763, 1818
ApeKI	GCWGC	8 cut(s)	58, 67, 112, 976, 1601, 1624, 1673, 1715
ApoI	RAATTY	1 cut(s)	316
ArsI	GACNNNNNNTTYG	2 cut(s)	1672, 1704
AspLEI	GCGC	6 cut(s)	112, 163, 828, 1149, 1317, 1774
AspS9I	GGNCC	5 cut(s)	383, 398, 446, 667, 1763
AsuC2I	CCSGG	1 cut(s)	438
AsuHPI	GGTGA	2 cut(s)	250, 1288
AvaI	CYCGRG	3 cut(s)	20, 71, 200
AvaII	GGWCC	2 cut(s)	446, 667
AxyI	CCTNAGG	1 cut(s)	1782
BaeGI	GKGCMC	1 cut(s)	1591
BaeI	ACNNNNGTAYC	4 cut(s)	1240, 1273, 1389, 1422
BalI	TGGCCA	1 cut(s)	1323
BanII	GRGCYC	1 cut(s)	408
BbsI	GAAGAC	3 cut(s)	626, 902, 1791
BbvCI	CCTCAGC	2 cut(s)	164, 1416
BbvI	GCAGC	8 cut(s)	45, 79, 99, 988, 1588, 1636, 1660, 1702
BccI	CCATC	6 cut(s)	151, 166, 299, 335, 1172, 1207
BceAI	ACGGC	3 cut(s)	16, 202, 370
BciVI	GTATCC	1 cut(s)	1241
BcnI	CCSGG	1 cut(s)	438
BcoDI	GTCTC	5 cut(s)	68, 498, 689, 855, 1421
BfaI	CTAG	4 cut(s)	258, 510, 875, 1724
BfmI	CTRYAG	1 cut(s)	1758
BfoI	RGCGCY	2 cut(s)	113, 164
BfuI	GTATCC	1 cut(s)	1241
BglI	GCCNNNNNGGC	1 cut(s)	1762
Bme1390I	CCNGG	1 cut(s)	438
Bme18I	GGWCC	2 cut(s)	446, 667
BmeRI	GACNNNNNGTC	1 cut(s)	1179
BmeT110I	CYCGRG	3 cut(s)	20, 71, 200
BmgBI	CACGTC	2 cut(s)	1208, 1226
BmgT120I	GGNCC	5 cut(s)	383, 398, 446, 667, 1763
BmiI	GGNNCC	2 cut(s)	405, 957
BmrFI	CCNGG	1 cut(s)	438
BmrI	ACTGGG	2 cut(s)	660, 1320
BmsI	GCATC	1 cut(s)	1759
BmuI	ACTGGG	2 cut(s)	660, 1320
BpiI	GAAGAC	3 cut(s)	626, 902, 1791
BpmI	CTGGAG	1 cut(s)	1484
Bpu10I	CCTNAGC	2 cut(s)	164, 1416
BpuEI	CTTGAG	1 cut(s)	620
BpuMI	CCSGG	1 cut(s)	438
BsaHI	GRCGYC	2 cut(s)	81, 781
BsaI	GGTCTC	2 cut(s)	68, 498
BsaJI	CCNNGG	6 cut(s)	84, 386, 437, 1094, 1478, 1653
BsaWI	WCCGGW	1 cut(s)	252
BsaXI	ACNNNNNCTCC	4 cut(s)	354, 384, 740, 770
Bsc4I	CCNNNNNNNGG	4 cut(s)	443, 515, 1462, 1615
Bse118I	RCCGGY	1 cut(s)	1820
Bse1I	ACTGG	5 cut(s)	655, 1207, 1315, 1324, 1331
Bse21I	CCTNAGG	1 cut(s)	1782
Bse3DI	GCAATG	3 cut(s)	605, 1166, 1348
BseDI	CCNNGG	6 cut(s)	84, 386, 437, 1094, 1478, 1653
BseGI	GGATG	5 cut(s)	310, 346, 468, 489, 1539
BseLI	CCNNNNNNNGG	4 cut(s)	443, 515, 1462, 1615
BseMI	GCAATG	3 cut(s)	605, 1166, 1348
BseMII	CTCAG	6 cut(s)	155, 602, 987, 1407, 1544, 1773
BseNI	ACTGG	5 cut(s)	655, 1207, 1315, 1324, 1331
BseRI	GAGGAG	6 cut(s)	113, 194, 218, 375, 671, 1277
BseSI	GKGCMC	1 cut(s)	1591
BseXI	GCAGC	8 cut(s)	45, 79, 99, 988, 1588, 1636, 1660, 1702
BsgI	GTGCAG	3 cut(s)	736, 1643, 1701
Bsh1236I	CGCG	1 cut(s)	212
BshFI	GGCC	8 cut(s)	89, 385, 400, 508, 682, 1323, 1765, 1820
BsiHKCI	CYCGRG	3 cut(s)	20, 71, 200
BsiSI	CCGG	6 cut(s)	95, 253, 278, 401, 437, 1821
BslFI	GGGAC	5 cut(s)	257, 528, 1077, 1112, 1138
BslI	CCNNNNNNNGG	4 cut(s)	443, 515, 1462, 1615
BsmAI	GTCTC	5 cut(s)	68, 498, 689, 855, 1421
BsmFI	GGGAC	5 cut(s)	257, 528, 1077, 1112, 1138
BsmI	GAATGC	2 cut(s)	477, 558
BsnI	GGCC	8 cut(s)	89, 385, 400, 508, 682, 1323, 1765, 1820
Bso31I	GGTCTC	2 cut(s)	68, 498
BsoBI	CYCGRG	3 cut(s)	20, 71, 200
Bsp1286I	GDGCHC	2 cut(s)	408, 1591
Bsp1407I	TGTACA	1 cut(s)	910
Bsp143I	GATC	3 cut(s)	595, 1087, 1372
Bsp19I	CCATGG	2 cut(s)	1094, 1653
BspANI	GGCC	8 cut(s)	89, 385, 400, 508, 682, 1323, 1765, 1820
BspCNI	CTCAG	6 cut(s)	156, 603, 988, 1408, 1545, 1774
BspFNI	CGCG	1 cut(s)	212
BspLI	GGNNCC	2 cut(s)	405, 957
BspMAI	CTGCAG	1 cut(s)	1762
BspPI	GGATC	3 cut(s)	603, 1082, 1367
BspTNI	GGTCTC	2 cut(s)	68, 498
BsrBI	CCGCTC	1 cut(s)	417
BsrDI	GCAATG	3 cut(s)	605, 1166, 1348
BsrFI	RCCGGY	1 cut(s)	1820
BsrGI	TGTACA	1 cut(s)	910
BsrI	ACTGG	5 cut(s)	655, 1207, 1315, 1324, 1331
BssAI	RCCGGY	1 cut(s)	1820
BssECI	CCNNGG	6 cut(s)	84, 386, 437, 1094, 1478, 1653
BssMI	GATC	3 cut(s)	595, 1087, 1372
BssNI	GRCGYC	2 cut(s)	81, 781
BssT1I	CCWWGG	4 cut(s)	84, 1094, 1478, 1653
Bst4CI	ACNGT	5 cut(s)	238, 866, 1031, 1068, 1593
Bst6I	CTCTTC	3 cut(s)	566, 573, 579
BstACI	GRCGYC	2 cut(s)	81, 781
BstAPI	GCANNNNNTGC	2 cut(s)	1733, 1757
BstAUI	TGTACA	1 cut(s)	910
BstDEI	CTNAG	6 cut(s)	164, 611, 996, 1416, 1553, 1782
BstDSI	CCRYGG	3 cut(s)	386, 1094, 1653
BstF5I	GGATG	5 cut(s)	310, 346, 468, 489, 1539
BstFNI	CGCG	1 cut(s)	212
BstH2I	RGCGCY	2 cut(s)	113, 164
BstHHI	GCGC	6 cut(s)	112, 163, 828, 1149, 1317, 1774
BstKTI	GATC	3 cut(s)	598, 1090, 1375
BstMAI	GTCTC	5 cut(s)	68, 498, 689, 855, 1421
BstMBI	GATC	3 cut(s)	595, 1087, 1372
BstMWI	GCNNNNNNNGC	9 cut(s)	37, 64, 67, 112, 1724, 1733, 1757, 1762, 1771
BstNSI	RCATGY	3 cut(s)	903, 952, 1513
BstSCI	CCNGG	1 cut(s)	436
BstSFI	CTRYAG	1 cut(s)	1758
BstSLI	GKGCMC	1 cut(s)	1591
BstUI	CGCG	1 cut(s)	212
BstV1I	GCAGC	8 cut(s)	45, 79, 99, 988, 1588, 1636, 1660, 1702
BstV2I	GAAGAC	3 cut(s)	626, 902, 1791
BstX2I	RGATCY	2 cut(s)	595, 1372
BstXI	CCANNNNNNTGG	1 cut(s)	1660
BstYI	RGATCY	2 cut(s)	595, 1372
Bsu36I	CCTNAGG	1 cut(s)	1782
BsuI	GTATCC	1 cut(s)	1241
BsuRI	GGCC	8 cut(s)	89, 385, 400, 508, 682, 1323, 1765, 1820
BtgI	CCRYGG	3 cut(s)	386, 1094, 1653
BtgZI	GCGATG	1 cut(s)	1226
BtrI	CACGTC	2 cut(s)	1208, 1226
BtsCI	GGATG	5 cut(s)	310, 346, 468, 489, 1539
BtsIMutI	CAGTG	3 cut(s)	1200, 1317, 1324
CaiI	CAGNNNCTG	1 cut(s)	1757
CfoI	GCGC	6 cut(s)	112, 163, 828, 1149, 1317, 1774
Cfr10I	RCCGGY	1 cut(s)	1820
Cfr13I	GGNCC	5 cut(s)	383, 398, 446, 667, 1763
CseI	GACGC	1 cut(s)	89
Csp6I	GTAC	4 cut(s)	208, 911, 1453, 1562
CspCI	CAANNNNNGTGG	2 cut(s)	1792, 1827
CviQI	GTAC	4 cut(s)	208, 911, 1453, 1562
DdeI	CTNAG	6 cut(s)	164, 611, 996, 1416, 1553, 1782
DpnI	GATC	3 cut(s)	597, 1089, 1374
DpnII	GATC	3 cut(s)	595, 1087, 1372
DriI	GACNNNNNGTC	1 cut(s)	1179
EaeI	YGGCCR	2 cut(s)	1321, 1818
Eam1104I	CTCTTC	3 cut(s)	566, 573, 579
Eam1105I	GACNNNNNGTC	1 cut(s)	1179
EarI	CTCTTC	3 cut(s)	566, 573, 579
EciI	GGCGGA	3 cut(s)	141, 191, 1080
Eco130I	CCWWGG	4 cut(s)	84, 1094, 1478, 1653
Eco147I	AGGCCT	2 cut(s)	89, 508
Eco24I	GRGCYC	1 cut(s)	408
Eco31I	GGTCTC	2 cut(s)	68, 498
Eco32I	GATATC	1 cut(s)	1036
Eco47I	GGWCC	2 cut(s)	446, 667
Eco57I	CTGAAG	1 cut(s)	83
Eco81I	CCTNAGG	1 cut(s)	1782
Eco88I	CYCGRG	3 cut(s)	20, 71, 200
EcoRV	GATATC	1 cut(s)	1036
EcoT14I	CCWWGG	4 cut(s)	84, 1094, 1478, 1653
EcoT22I	ATGCAT	1 cut(s)	504
EcoT38I	GRGCYC	1 cut(s)	408
ErhI	CCWWGG	4 cut(s)	84, 1094, 1478, 1653
FaqI	GGGAC	5 cut(s)	257, 528, 1077, 1112, 1138
FauI	CCCGC	4 cut(s)	108, 115, 410, 1578
FauNDI	CATATG	1 cut(s)	1107
FokI	GGATG	5 cut(s)	317, 353, 475, 496, 1546
FriOI	GRGCYC	1 cut(s)	408
FspAI	RTGCGCAY	1 cut(s)	1148
FspBI	CTAG	4 cut(s)	258, 510, 875, 1724
FspI	TGCGCA	1 cut(s)	1148
GlaI	GCGC	6 cut(s)	111, 162, 827, 1148, 1316, 1773
GsuI	CTGGAG	1 cut(s)	1484
HaeII	RGCGCY	2 cut(s)	113, 164
HaeIII	GGCC	8 cut(s)	89, 385, 400, 508, 682, 1323, 1765, 1820
HapII	CCGG	6 cut(s)	95, 253, 278, 401, 437, 1821
HgaI	GACGC	1 cut(s)	89
HhaI	GCGC	6 cut(s)	112, 163, 828, 1149, 1317, 1774
Hin1I	GRCGYC	2 cut(s)	81, 781
Hin6I	GCGC	6 cut(s)	110, 161, 826, 1147, 1315, 1772
HinP1I	GCGC	6 cut(s)	110, 161, 826, 1147, 1315, 1772
HincII	GTYRAC	4 cut(s)	217, 853, 1013, 1813
HindII	GTYRAC	4 cut(s)	217, 853, 1013, 1813
HinfI	GANTC	6 cut(s)	47, 142, 293, 926, 1074, 1664
HpaII	CCGG	6 cut(s)	95, 253, 278, 401, 437, 1821
HphI	GGTGA	2 cut(s)	250, 1288
Hpy166II	GTNNAC	6 cut(s)	217, 734, 853, 1013, 1562, 1813
Hpy188I	TCNGA	8 cut(s)	55, 327, 450, 997, 1073, 1185, 1424, 1699
Hpy188III	TCNNGA	6 cut(s)	20, 22, 73, 599, 875, 1781
Hpy8I	GTNNAC	6 cut(s)	217, 734, 853, 1013, 1562, 1813
Hpy99I	CGWCG	3 cut(s)	55, 83, 783
HpyAV	CCTTC	5 cut(s)	262, 586, 736, 805, 1571
HpyCH4III	ACNGT	5 cut(s)	238, 866, 1031, 1068, 1593
HpyCH4IV	ACGT	4 cut(s)	781, 1207, 1225, 1796
HpyF10VI	GCNNNNNNNGC	9 cut(s)	37, 64, 67, 112, 1724, 1733, 1757, 1762, 1771
HpyF3I	CTNAG	6 cut(s)	164, 611, 996, 1416, 1553, 1782
HpySE526I	ACGT	4 cut(s)	781, 1207, 1225, 1796
Hsp92I	GRCGYC	2 cut(s)	81, 781
HspAI	GCGC	6 cut(s)	110, 161, 826, 1147, 1315, 1772
KroI	GCCGGC	1 cut(s)	1820
KroNI	GCCGGC	1 cut(s)	1822
Kzo9I	GATC	3 cut(s)	595, 1087, 1372
LmnI	GCTCC	7 cut(s)	55, 403, 658, 961, 1216, 1345, 1783
Lsp1109I	GCAGC	8 cut(s)	45, 79, 99, 988, 1588, 1636, 1660, 1702
LweI	GCATC	1 cut(s)	1759
MaeI	CTAG	4 cut(s)	258, 510, 875, 1724
MaeII	ACGT	4 cut(s)	781, 1207, 1225, 1796
MaeIII	GTNAC	3 cut(s)	232, 1198, 1536
MalI	GATC	3 cut(s)	597, 1089, 1374
MbiI	CCGCTC	1 cut(s)	417
MboI	GATC	3 cut(s)	595, 1087, 1372
MboII	GAAGA	6 cut(s)	583, 590, 596, 631, 907, 1791
MfeI	CAATTG	1 cut(s)	737
MflI	RGATCY	2 cut(s)	595, 1372
MhlI	GDGCHC	2 cut(s)	408, 1591
MlsI	TGGCCA	1 cut(s)	1323
MluCI	AATT	7 cut(s)	316, 737, 790, 831, 1042, 1302, 1496
MluNI	TGGCCA	1 cut(s)	1323
MlyI	GAGTC	2 cut(s)	56, 1083
MmeI	TCCRAC	2 cut(s)	33, 1339
Mox20I	TGGCCA	1 cut(s)	1323
Mph1103I	ATGCAT	1 cut(s)	504
MroNI	GCCGGC	1 cut(s)	1820
MscI	TGGCCA	1 cut(s)	1323
MseI	TTAA	3 cut(s)	971, 1026, 1155
MslI	CAYNNNNRTG	3 cut(s)	846, 1106, 1658
Msp20I	TGGCCA	1 cut(s)	1323
MspA1I	CMGCKG	1 cut(s)	1715
MspI	CCGG	6 cut(s)	95, 253, 278, 401, 437, 1821
MspR9I	CCNGG	1 cut(s)	438
MunI	CAATTG	1 cut(s)	737
Mva1269I	GAATGC	2 cut(s)	477, 558
MvnI	CGCG	1 cut(s)	212
MwoI	GCNNNNNNNGC	9 cut(s)	37, 64, 67, 112, 1724, 1733, 1757, 1762, 1771
NaeI	GCCGGC	1 cut(s)	1822
NciI	CCSGG	1 cut(s)	438
NcoI	CCATGG	2 cut(s)	1094, 1653
NdeI	CATATG	1 cut(s)	1107
NdeII	GATC	3 cut(s)	595, 1087, 1372
NgoMIV	GCCGGC	1 cut(s)	1820
NlaIV	GGNNCC	2 cut(s)	405, 957
NmeAIII	GCCGAG	1 cut(s)	501
NmuCI	GTSAC	2 cut(s)	1198, 1536
NsbI	TGCGCA	1 cut(s)	1148
NsiI	ATGCAT	1 cut(s)	504
NspI	RCATGY	3 cut(s)	903, 952, 1513
PaeI	GCATGC	1 cut(s)	1513
PaeR7I	CTCGAG	3 cut(s)	20, 71, 200
PceI	AGGCCT	2 cut(s)	89, 508
PciI	ACATGT	1 cut(s)	948
PctI	GAATGC	2 cut(s)	477, 558
PdiI	GCCGGC	1 cut(s)	1822
PfeI	GAWTC	4 cut(s)	142, 293, 926, 1664
PleI	GAGTC	2 cut(s)	55, 1082
PpsI	GAGTC	2 cut(s)	55, 1082
PscI	ACATGT	1 cut(s)	948
PspN4I	GGNNCC	2 cut(s)	405, 957
PspPI	GGNCC	5 cut(s)	383, 398, 446, 667, 1763
PspXI	VCTCGAGB	1 cut(s)	200
PstI	CTGCAG	1 cut(s)	1762
PstNI	CAGNNNCTG	1 cut(s)	1757
PsuI	RGATCY	2 cut(s)	595, 1372
PvuII	CAGCTG	1 cut(s)	1715
RsaI	GTAC	4 cut(s)	209, 912, 1454, 1563
RsaNI	GTAC	4 cut(s)	208, 911, 1453, 1562
RseI	CAYNNNNRTG	3 cut(s)	846, 1106, 1658
SaqAI	TTAA	3 cut(s)	971, 1026, 1155
Sau3AI	GATC	3 cut(s)	595, 1087, 1372
Sau96I	GGNCC	5 cut(s)	383, 398, 446, 667, 1763
SbfI	CCTGCAGG	1 cut(s)	1762
SchI	GAGTC	2 cut(s)	56, 1083
ScrFI	CCNGG	1 cut(s)	438
SdaI	CCTGCAGG	1 cut(s)	1762
SduI	GDGCHC	2 cut(s)	408, 1591
SfaNI	GCATC	1 cut(s)	1759
SfcI	CTRYAG	1 cut(s)	1758
Sfr274I	CTCGAG	3 cut(s)	20, 71, 200
SinI	GGWCC	2 cut(s)	446, 667
SlaI	CTCGAG	3 cut(s)	20, 71, 200
SmiMI	CAYNNNNRTG	3 cut(s)	846, 1106, 1658
SmlI	CTYRAG	4 cut(s)	20, 71, 200, 599
SmoI	CTYRAG	4 cut(s)	20, 71, 200, 599
SphI	GCATGC	1 cut(s)	1513
Sse8387I	CCTGCAGG	1 cut(s)	1762
Sse9I	AATT	7 cut(s)	316, 737, 790, 831, 1042, 1302, 1496
SseBI	AGGCCT	2 cut(s)	89, 508
SspI	AATATT	2 cut(s)	989, 1393
SspMI	CTAG	4 cut(s)	258, 510, 875, 1724
StuI	AGGCCT	2 cut(s)	89, 508
StyD4I	CCNGG	1 cut(s)	436
StyI	CCWWGG	4 cut(s)	84, 1094, 1478, 1653
TaaI	ACNGT	5 cut(s)	238, 866, 1031, 1068, 1593
TaiI	ACGT	4 cut(s)	784, 1210, 1228, 1799
TaqI	TCGA	6 cut(s)	21, 72, 170, 201, 296, 644
TaqII	GACCGA	1 cut(s)	92
TasI	AATT	7 cut(s)	316, 737, 790, 831, 1042, 1302, 1496
TatI	WGTACW	1 cut(s)	910
TauI	GCSGC	3 cut(s)	192, 427, 888
TfiI	GAWTC	4 cut(s)	142, 293, 926, 1664
Tru1I	TTAA	3 cut(s)	971, 1026, 1155
Tru9I	TTAA	3 cut(s)	971, 1026, 1155
TscAI	CASTG	3 cut(s)	1207, 1324, 1331
TseFI	GTSAC	2 cut(s)	1198, 1536
TseI	GCWGC	8 cut(s)	58, 67, 112, 976, 1601, 1624, 1673, 1715
Tsp45I	GTSAC	2 cut(s)	1198, 1536
TspDTI	ATGAA	8 cut(s)	281, 584, 605, 806, 908, 1094, 1155, 1590
TspGWI	ACGGA	1 cut(s)	234
TspRI	CASTG	3 cut(s)	1207, 1324, 1331
VpaK11BI	GGWCC	2 cut(s)	446, 667
XapI	RAATTY	1 cut(s)	316
XbaI	TCTAGA	1 cut(s)	874
XceI	RCATGY	3 cut(s)	903, 952, 1513
XhoI	CTCGAG	3 cut(s)	20, 71, 200
XspI	CTAG	4 cut(s)	258, 510, 875, 1724
ZraI	GACGTC	1 cut(s)	782
Zsp2I	ATGCAT	1 cut(s)	504

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.