Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0011095

Physical Location & Seq

Genomic Coordinates Forward (+)

6262358 .. 6266600

Gene Structure 4243 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G007220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

ATGGAGACCCAATCTGGCGGCAAAGAAGAGACGGCCATCAAAGCAATGCGCCTAGAGCTCGAAACCCGAATGGAGTCCCAACGCGCCACCCAGCTCGAACTCCTCTCTTATCTCCAATCCGAAATCGACCCCGCCATCGTCCCCGCCATCGATCTCTCCCTCAAGGTCCTCTCTTCCTTCAACAACCGCCCCTTCACTCCCACCCATCCTCTACCCGACCCCAAGCCCAACCCCAGAAAGCCCATCCAGCCCGCCCGCCCTCCCTCCCCACAACAACAACAACAACCCCTCCTCCCTTCGCCCGCCTCCTCCCCCCCCGAAACCCCCGCCCGAGAATCCACCCCCGTCGTCATGGACGACAGCGGCAACCCGCTTTCGGTTATCCGGGCCATGATTGCCGTTCGGTTTCTTGAGAGAGTGCCGTTTATGCTGGTCGAGTCCTCGGAGCTGCTGAAGCAGCTCGAGACCGACGCCAAGGCCTCGCCGGAGGAGAAGCTCGCGCTGCGGGAGGTCGGAGGAGAGAACGGGGGGATTCTGGCCGTGGAGATGGCGCTCCGGTCGATGGCCGAGGAGAACGGCGGCGTTATCCTGGAGGAGTACGCGGTCAACGGAAAGTCTAGGGTTACGGTGAGGGATATTGACCGGACTAGGCTGATGAAGGAGTTGCCGGAGAGCAAGCAAGATTCGATTGTGGATGGGAATGGGAATTTCAATCAGGGTAGTGGCATGGACGGTGGGAATAACAATGGAGGAGGGTTTGTGGGGAGAGGTGGGCCCTGGGTGGTTGGCCCTGAGCCCTACATGAGCGGCTTGCCCCCATTGTTTCCGGGGATAGGTCCCAGAGGAGGGAGAGGGATGATAGGAATGCCGCCGAGAGGGATGATTGGCTCTCCAATGCATAGGCCTAATATGGGGCAGAATGGTGGAATGGTGGTCAGTCCCAATGGAATGCCCAATAAGAGCATGAAGAGTGAAGAGGAAGAGATGAAGGATCTTGAGGCTTTGCTCAGTAAGAAGACTTATAGGGAGTTGCAGAAGTCGAAAACTGGGGAGGAGCTTTTGGACCTCATTCACAGGCCAACTGCAAAGGAGACTGCTGTGGCAAACAAGTTCAAAACTAAAGGTGGTTCACAATTGAAGGAATACTGCACCTCCCTAACGAAAGAGGACTGCCGACGTCAATCTAATTCCTTGCTCGCTTGTGAGAAGGTTCATTTTAGGCGCATAATTGCTCTACATACTGATGTCAACTTGGGAGACTGTTCTTTTCTAGATACTTGCCGCCACATGAAGACATGCAAGTATGTACATTATGAGCTTGATTCAACACCAGATGTGTCAAACATGTTGGCTCCCCCTAAACCACTAAAGCAGCGTGCTGAATATTGTTCTGAGGTAGAACTTGGTCAACCACAATGGATTAACTGTGATATCCGCAATTTTAGAATGGATATATTGGGACAGTTCGGAGTCATAATGGCTGATCCGCCATGGGACATTCATATGGAATTGCCTTATGGGACTATGGCTGATGATGAAATGCGCACTCTTAATGTTCCTGCATTGCAGACTGATGGTCTGATTTTCCTTTGGGTCACTGGACGTGCGATGGAGCTTGGACGTGAATGTTTAGAACTTTGGGGATACAAGCGTATTGAGGAGATGATTTGGGTGAAAACTAATCAACTGCAACGAATAATTAGAACTGGGCGCACTGGCCACTGGCTAAATCATAGCAAGGAGCATTGCCTCGTTGGAATAAAAGGAGATCCATTAGTAAATAGGAATATTGATACTGATGTCATTGTTGCTGAGGTCAGAGAGACAAGTCGTAAGCCAGACGAGATGTACCCTTTGCTGGAGAGGATTAGTCCAAGGACAAGAAAGCTGGAACTATTTGCACGCATGCACAACACTCATGCAGGGTGGATGTCACTCGGTAATCAACTGAGTGGTGTACGATTGGTTGATGAAGGCTTGCGGGCACGGTTCAAGGCTGCCTACCCAGAGGTGGAGGTGCAGCCAGCTTCCCCACCCAGAGCTTCTGCCATGGAAGTGGATTCAAATGCTGCCCAAACGAGAAGTCCATTTTCCGAAGCAAAGCCCACAGCTGCACAACTAGCAGAGGTTGCTGCTCCACAGCAAGCAGAGCCTGCAGGGCCAGATGCGCCTGCTTCTGAGGGGAAGCCAACGTCTACCACCGATGTTGACATGGCCGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008173 GO:0008174 GO:0008757 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016071 GO:0016422 GO:0016556 GO:0016604 GO:0016607 GO:0016740 GO:0016741 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0034641 GO:0034708 GO:0036396 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045293 GO:0046483 GO:0070013 GO:0071704 GO:0080009 GO:0090304 GO:0140098 GO:1901360 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MT-A70

Protein Analysis

740

Amino Acids

81.79

Weight (kDa)

5.88

Isoelectric Point (pI)

52.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MT-A70	PF05063	489 - 649	3.3e-60	MT-A70

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011095)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10760
fragaria_vesca	FvH4_5g11050 FvH4_5g11050
malus_domestica	MD06G1116900.v1.1 MD14G1124400.v1.1
prunus_persica	Prupe.5G128200_v2.0.a1
pyrus_communis	pycom06g10900
rosa_chinensis	RchiOBHm_Chr7g0186271 RchiOBHm_Chr7g0186751
rosa_laevigata	RLG00000004819
rosa_multiflora	Rmu_sc0009734.1_g000004
rosa_roxburghii	Rroxscaffold_3G00267860
rosa_rugosa	Rorug06G0473000 Rorug06G0476300
rosa_samantha	Rh7AG064200 Rh7BG080700 Rh7CG083300 Rh7DG084200
rosa_wichuraiana	Rw7G006690 Rw7G007220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1180
Acc16I	TGCGCA	1 cut(s)	1544
AccBSI	CCGCTC	1 cut(s)	807
AccI	GTMKAC	1 cut(s)	2195
AccII	CGCG	3 cut(s)	84, 500, 602
AclWI	GGATC	3 cut(s)	999, 1478, 1763
AcoI	YGGCCR	5 cut(s)	33, 537, 564, 1717, 2214
AcsI	RAATTY	1 cut(s)	706
AcuI	CTGAAG	1 cut(s)	473
AcyI	GRCGYC	2 cut(s)	471, 1177
AfaI	GTAC	4 cut(s)	599, 1308, 1850, 1959
AfiI	CCNNNNNNNGG	9 cut(s)	376, 562, 833, 845, 846, 875, 911, 1858, 2011
AflIII	ACRYGT	1 cut(s)	1344
AgsI	TTSAA	7 cut(s)	181, 712, 1114, 1138, 1326, 1993, 2064
AhdI	GACNNNNNGTC	1 cut(s)	1575
AjiI	CACGTC	2 cut(s)	1604, 1622
AjnI	CCWGG	2 cut(s)	588, 776
Alw21I	GWGCWC	1 cut(s)	60
Alw26I	GTCTC	5 cut(s)	23, 458, 1085, 1251, 1817
AlwI	GGATC	3 cut(s)	999, 1478, 1763
AlwNI	CAGNNNCTG	1 cut(s)	2153
Ama87I	CYCGRG	2 cut(s)	330, 461
ApaI	GGGCCC	1 cut(s)	777
ApeKI	GCWGC	9 cut(s)	448, 457, 502, 1372, 1997, 2020, 2069, 2111, 2132
ApoI	RAATTY	1 cut(s)	706
ArsI	GACNNNNNNTTYG	2 cut(s)	2068, 2100
AspLEI	GCGC	8 cut(s)	51, 86, 502, 553, 1224, 1545, 1713, 2170
AspS9I	GGNCC	8 cut(s)	166, 387, 773, 774, 788, 836, 1063, 2159
AsuC2I	CCSGG	2 cut(s)	386, 828
AsuHPI	GGTGA	2 cut(s)	640, 1684
AvaI	CYCGRG	2 cut(s)	330, 461
AvaII	GGWCC	3 cut(s)	166, 836, 1063
BaeGI	GKGCMC	2 cut(s)	777, 1987
BaeI	ACNNNNGTAYC	4 cut(s)	1636, 1669, 1785, 1818
BalI	TGGCCA	1 cut(s)	1719
BanII	GRGCYC	3 cut(s)	60, 777, 798
BbsI	GAAGAC	2 cut(s)	1022, 1298
Bbv12I	GWGCWC	1 cut(s)	60
BbvCI	CCTCAGC	1 cut(s)	1812
BbvI	GCAGC	9 cut(s)	435, 469, 489, 1384, 1984, 2032, 2056, 2098, 2119
BceAI	ACGGC	5 cut(s)	48, 383, 406, 524, 592
BciT130I	CCWGG	2 cut(s)	590, 778
BciVI	GTATCC	1 cut(s)	1637
BcnI	CCSGG	2 cut(s)	386, 828
BcoDI	GTCTC	5 cut(s)	23, 458, 1085, 1251, 1817
BfaI	CTAG	5 cut(s)	53, 618, 648, 1271, 2120
BfmI	CTRYAG	1 cut(s)	2154
BfoI	RGCGCY	1 cut(s)	554
BfuI	GTATCC	1 cut(s)	1637
BglI	GCCNNNNNGGC	1 cut(s)	2158
Bme1390I	CCNGG	4 cut(s)	386, 590, 778, 828
Bme18I	GGWCC	3 cut(s)	166, 836, 1063
BmeRI	GACNNNNNGTC	1 cut(s)	1575
BmeT110I	CYCGRG	2 cut(s)	330, 461
BmgBI	CACGTC	2 cut(s)	1604, 1622
BmgT120I	GGNCC	8 cut(s)	166, 387, 773, 774, 788, 836, 1063, 2159
BmiI	GGNNCC	3 cut(s)	775, 838, 1353
BmrFI	CCNGG	4 cut(s)	386, 590, 778, 828
BmrI	ACTGGG	2 cut(s)	1056, 1716
BmsI	GCATC	1 cut(s)	2155
BmuI	ACTGGG	2 cut(s)	1056, 1716
BpiI	GAAGAC	2 cut(s)	1022, 1298
BpmI	CTGGAG	2 cut(s)	611, 1880
Bpu10I	CCTNAGC	2 cut(s)	792, 1812
BpuEI	CTTGAG	3 cut(s)	146, 431, 1016
BpuMI	CCSGG	2 cut(s)	386, 828
Bsa29I	ATCGAT	1 cut(s)	150
BsaHI	GRCGYC	2 cut(s)	471, 1177
BsaI	GGTCTC	1 cut(s)	458
BsaWI	WCCGGW	2 cut(s)	555, 642
BsaXI	ACNNNNNCTCC	8 cut(s)	273, 276, 303, 306, 744, 774, 1136, 1166
Bsc4I	CCNNNNNNNGG	9 cut(s)	376, 562, 833, 845, 846, 875, 911, 1858, 2011
Bse118I	RCCGGY	1 cut(s)	2216
Bse1I	ACTGG	5 cut(s)	1051, 1603, 1711, 1720, 1727
Bse3DI	GCAATG	3 cut(s)	51, 1562, 1744
BseBI	CCWGG	2 cut(s)	590, 778
BseCI	ATCGAT	1 cut(s)	150
BseGI	GGATG	6 cut(s)	205, 243, 700, 861, 885, 1935
BseLI	CCNNNNNNNGG	9 cut(s)	376, 562, 833, 845, 846, 875, 911, 1858, 2011
BseMI	GCAATG	3 cut(s)	51, 1562, 1744
BseMII	CTCAG	6 cut(s)	783, 1021, 1383, 1803, 1940, 2169
BseNI	ACTGG	5 cut(s)	1051, 1603, 1711, 1720, 1727
BseSI	GKGCMC	2 cut(s)	777, 1987
BseXI	GCAGC	9 cut(s)	435, 469, 489, 1384, 1984, 2032, 2056, 2098, 2119
BseYI	CCCAGC	1 cut(s)	90
BsgI	GTGCAG	3 cut(s)	1132, 2039, 2097
Bsh1236I	CGCG	3 cut(s)	84, 500, 602
Bsh1285I	CGRYCG	1 cut(s)	560
BshVI	ATCGAT	1 cut(s)	150
BsiEI	CGRYCG	1 cut(s)	560
BsiHKAI	GWGCWC	1 cut(s)	60
BsiHKCI	CYCGRG	2 cut(s)	330, 461
BsiSI	CCGG	7 cut(s)	385, 485, 556, 643, 668, 827, 2217
BslFI	GGGAC	7 cut(s)	61, 125, 822, 924, 1473, 1508, 1534
BslI	CCNNNNNNNGG	9 cut(s)	376, 562, 833, 845, 846, 875, 911, 1858, 2011
BsmAI	GTCTC	5 cut(s)	23, 458, 1085, 1251, 1817
BsmBI	CGTCTC	1 cut(s)	23
BsmFI	GGGAC	7 cut(s)	61, 125, 822, 924, 1473, 1508, 1534
BsmI	GAATGC	2 cut(s)	870, 954
Bso31I	GGTCTC	1 cut(s)	458
BsoBI	CYCGRG	2 cut(s)	330, 461
Bsp120I	GGGCCC	1 cut(s)	773
Bsp1286I	GDGCHC	4 cut(s)	60, 777, 798, 1987
Bsp1407I	TGTACA	1 cut(s)	1306
Bsp143I	GATC	4 cut(s)	151, 991, 1483, 1768
Bsp19I	CCATGG	2 cut(s)	1490, 2049
BspCNI	CTCAG	6 cut(s)	784, 1020, 1384, 1804, 1941, 2170
BspDI	ATCGAT	1 cut(s)	150
BspFNI	CGCG	3 cut(s)	84, 500, 602
BspLI	GGNNCC	3 cut(s)	775, 838, 1353
BspMAI	CTGCAG	1 cut(s)	2158
BspPI	GGATC	3 cut(s)	999, 1478, 1763
BspTNI	GGTCTC	1 cut(s)	458
BsrBI	CCGCTC	1 cut(s)	807
BsrDI	GCAATG	3 cut(s)	51, 1562, 1744
BsrFI	RCCGGY	1 cut(s)	2216
BsrGI	TGTACA	1 cut(s)	1306
BsrI	ACTGG	5 cut(s)	1051, 1603, 1711, 1720, 1727
BssAI	RCCGGY	1 cut(s)	2216
BssMI	GATC	4 cut(s)	151, 991, 1483, 1768
BssNI	GRCGYC	2 cut(s)	471, 1177
BssT1I	CCWWGG	4 cut(s)	474, 1490, 1874, 2049
Bst2UI	CCWGG	2 cut(s)	590, 778
Bst4CI	ACNGT	6 cut(s)	628, 734, 1262, 1427, 1464, 1989
Bst6I	CTCTTC	5 cut(s)	21, 178, 962, 969, 975
BstACI	GRCGYC	2 cut(s)	471, 1177
BstAPI	GCANNNNNTGC	2 cut(s)	2129, 2153
BstAUI	TGTACA	1 cut(s)	1306
BstDEI	CTNAG	6 cut(s)	792, 1007, 1392, 1812, 1949, 2178
BstDSI	CCRYGG	3 cut(s)	540, 1490, 2049
BstF5I	GGATG	6 cut(s)	205, 243, 700, 861, 885, 1935
BstFNI	CGCG	3 cut(s)	84, 500, 602
BstH2I	RGCGCY	1 cut(s)	554
BstHHI	GCGC	8 cut(s)	51, 86, 502, 553, 1224, 1545, 1713, 2170
BstKTI	GATC	4 cut(s)	154, 994, 1486, 1771
BstMAI	GTCTC	5 cut(s)	23, 458, 1085, 1251, 1817
BstMBI	GATC	4 cut(s)	151, 991, 1483, 1768
BstMCI	CGRYCG	1 cut(s)	560
BstNI	CCWGG	2 cut(s)	590, 778
BstNSI	RCATGY	3 cut(s)	1299, 1348, 1909
BstSCI	CCNGG	4 cut(s)	384, 588, 776, 826
BstSFI	CTRYAG	1 cut(s)	2154
BstSLI	GKGCMC	2 cut(s)	777, 1987
BstUI	CGCG	3 cut(s)	84, 500, 602
BstV1I	GCAGC	9 cut(s)	435, 469, 489, 1384, 1984, 2032, 2056, 2098, 2119
BstV2I	GAAGAC	2 cut(s)	1022, 1298
BstX2I	RGATCY	2 cut(s)	991, 1768
BstXI	CCANNNNNNTGG	1 cut(s)	2056
BstYI	RGATCY	2 cut(s)	991, 1768
Bsu15I	ATCGAT	1 cut(s)	150
BsuI	GTATCC	1 cut(s)	1637
BsuTUI	ATCGAT	1 cut(s)	150
BtgI	CCRYGG	3 cut(s)	540, 1490, 2049
BtgZI	GCGATG	1 cut(s)	1622
BtrI	CACGTC	2 cut(s)	1604, 1622
BtsCI	GGATG	6 cut(s)	205, 243, 700, 861, 885, 1935
BtsIMutI	CAGTG	3 cut(s)	1596, 1713, 1720
CaiI	CAGNNNCTG	1 cut(s)	2153
CfoI	GCGC	8 cut(s)	51, 86, 502, 553, 1224, 1545, 1713, 2170
Cfr10I	RCCGGY	1 cut(s)	2216
Cfr13I	GGNCC	8 cut(s)	166, 387, 773, 774, 788, 836, 1063, 2159
ClaI	ATCGAT	1 cut(s)	150
CseI	GACGC	1 cut(s)	479
Csp6I	GTAC	4 cut(s)	598, 1307, 1849, 1958
CspCI	CAANNNNNGTGG	2 cut(s)	2188, 2223
CviQI	GTAC	4 cut(s)	598, 1307, 1849, 1958
DdeI	CTNAG	6 cut(s)	792, 1007, 1392, 1812, 1949, 2178
DpnI	GATC	4 cut(s)	153, 993, 1485, 1770
DpnII	GATC	4 cut(s)	151, 991, 1483, 1768
DriI	GACNNNNNGTC	1 cut(s)	1575
EaeI	YGGCCR	5 cut(s)	33, 537, 564, 1717, 2214
Eam1104I	CTCTTC	5 cut(s)	21, 178, 962, 969, 975
Eam1105I	GACNNNNNGTC	1 cut(s)	1575
EarI	CTCTTC	5 cut(s)	21, 178, 962, 969, 975
EciI	GGCGGA	1 cut(s)	1476
Ecl136II	GAGCTC	1 cut(s)	58
Eco130I	CCWWGG	4 cut(s)	474, 1490, 1874, 2049
Eco147I	AGGCCT	2 cut(s)	479, 904
Eco24I	GRGCYC	3 cut(s)	60, 777, 798
Eco31I	GGTCTC	1 cut(s)	458
Eco32I	GATATC	1 cut(s)	1432
Eco47I	GGWCC	3 cut(s)	166, 836, 1063
Eco53kI	GAGCTC	1 cut(s)	58
Eco57I	CTGAAG	1 cut(s)	473
Eco88I	CYCGRG	2 cut(s)	330, 461
EcoICRI	GAGCTC	1 cut(s)	58
EcoO109I	RGGNCCY	3 cut(s)	166, 774, 836
EcoRII	CCWGG	2 cut(s)	588, 776
EcoRV	GATATC	1 cut(s)	1432
EcoT14I	CCWWGG	4 cut(s)	474, 1490, 1874, 2049
EcoT22I	ATGCAT	1 cut(s)	900
EcoT38I	GRGCYC	3 cut(s)	60, 777, 798
ErhI	CCWWGG	4 cut(s)	474, 1490, 1874, 2049
Esp3I	CGTCTC	1 cut(s)	23
FaqI	GGGAC	7 cut(s)	61, 125, 822, 924, 1473, 1508, 1534
FauI	CCCGC	9 cut(s)	139, 151, 259, 263, 310, 334, 378, 498, 1974
FauNDI	CATATG	1 cut(s)	1503
FblI	GTMKAC	1 cut(s)	2195
FokI	GGATG	6 cut(s)	192, 230, 707, 868, 892, 1942
FriOI	GRGCYC	3 cut(s)	60, 777, 798
FspAI	RTGCGCAY	1 cut(s)	1544
FspBI	CTAG	5 cut(s)	53, 618, 648, 1271, 2120
FspI	TGCGCA	1 cut(s)	1544
GlaI	GCGC	8 cut(s)	50, 85, 501, 552, 1223, 1544, 1712, 2169
GsaI	CCCAGC	1 cut(s)	94
GsuI	CTGGAG	2 cut(s)	611, 1880
HaeII	RGCGCY	1 cut(s)	554
HapII	CCGG	7 cut(s)	385, 485, 556, 643, 668, 827, 2217
HgaI	GACGC	1 cut(s)	479
HhaI	GCGC	8 cut(s)	51, 86, 502, 553, 1224, 1545, 1713, 2170
Hin1I	GRCGYC	2 cut(s)	471, 1177
Hin6I	GCGC	8 cut(s)	49, 84, 500, 551, 1222, 1543, 1711, 2168
HinP1I	GCGC	8 cut(s)	49, 84, 500, 551, 1222, 1543, 1711, 2168
HincII	GTYRAC	4 cut(s)	607, 1249, 1409, 2209
HindII	GTYRAC	4 cut(s)	607, 1249, 1409, 2209
HinfI	GANTC	8 cut(s)	74, 335, 437, 532, 683, 1322, 1470, 2060
HpaII	CCGG	7 cut(s)	385, 485, 556, 643, 668, 827, 2217
HphI	GGTGA	2 cut(s)	640, 1684
Hpy166II	GTNNAC	7 cut(s)	607, 1130, 1249, 1409, 1958, 2196, 2209
Hpy188I	TCNGA	9 cut(s)	121, 445, 515, 1393, 1469, 1581, 1820, 2095, 2179
Hpy188III	TCNNGA	4 cut(s)	410, 463, 995, 1271
Hpy8I	GTNNAC	7 cut(s)	607, 1130, 1249, 1409, 1958, 2196, 2209
Hpy99I	CGWCG	3 cut(s)	350, 473, 1179
HpyAV	CCTTC	8 cut(s)	187, 202, 306, 652, 982, 1132, 1201, 1967
HpyCH4III	ACNGT	6 cut(s)	628, 734, 1262, 1427, 1464, 1989
HpyCH4IV	ACGT	4 cut(s)	1177, 1603, 1621, 2192
HpyF3I	CTNAG	6 cut(s)	792, 1007, 1392, 1812, 1949, 2178
HpySE526I	ACGT	4 cut(s)	1177, 1603, 1621, 2192
Hsp92I	GRCGYC	2 cut(s)	471, 1177
HspAI	GCGC	8 cut(s)	49, 84, 500, 551, 1222, 1543, 1711, 2168
KroI	GCCGGC	1 cut(s)	2216
KroNI	GCCGGC	1 cut(s)	2218
Kzo9I	GATC	4 cut(s)	151, 991, 1483, 1768
LmnI	GCTCC	7 cut(s)	445, 558, 1054, 1357, 1612, 1741, 2140
Lsp1109I	GCAGC	9 cut(s)	435, 469, 489, 1384, 1984, 2032, 2056, 2098, 2119
LweI	GCATC	1 cut(s)	2155
MaeI	CTAG	5 cut(s)	53, 618, 648, 1271, 2120
MaeII	ACGT	4 cut(s)	1177, 1603, 1621, 2192
MaeIII	GTNAC	3 cut(s)	622, 1594, 1932
MalI	GATC	4 cut(s)	153, 993, 1485, 1770
MbiI	CCGCTC	1 cut(s)	807
MboI	GATC	4 cut(s)	151, 991, 1483, 1768
MboII	GAAGA	7 cut(s)	38, 165, 979, 986, 992, 1027, 1303
MfeI	CAATTG	1 cut(s)	1133
MflI	RGATCY	2 cut(s)	991, 1768
MhlI	GDGCHC	4 cut(s)	60, 777, 798, 1987
MlsI	TGGCCA	1 cut(s)	1719
MluCI	AATT	7 cut(s)	706, 1133, 1186, 1227, 1438, 1508, 1698
MluNI	TGGCCA	1 cut(s)	1719
MlyI	GAGTC	3 cut(s)	83, 446, 1479
MmeI	TCCRAC	2 cut(s)	493, 1735
Mox20I	TGGCCA	1 cut(s)	1719
Mph1103I	ATGCAT	1 cut(s)	900
MroNI	GCCGGC	1 cut(s)	2216
MscI	TGGCCA	1 cut(s)	1719
MseI	TTAA	2 cut(s)	1422, 1551
MslI	CAYNNNNRTG	3 cut(s)	1242, 1502, 2054
Msp20I	TGGCCA	1 cut(s)	1719
MspA1I	CMGCKG	2 cut(s)	363, 2111
MspI	CCGG	7 cut(s)	385, 485, 556, 643, 668, 827, 2217
MspR9I	CCNGG	4 cut(s)	386, 590, 778, 828
MunI	CAATTG	1 cut(s)	1133
Mva1269I	GAATGC	2 cut(s)	870, 954
MvaI	CCWGG	2 cut(s)	590, 778
MvnI	CGCG	3 cut(s)	84, 500, 602
NaeI	GCCGGC	1 cut(s)	2218
NciI	CCSGG	2 cut(s)	386, 828
NcoI	CCATGG	2 cut(s)	1490, 2049
NdeI	CATATG	1 cut(s)	1503
NdeII	GATC	4 cut(s)	151, 991, 1483, 1768
NgoMIV	GCCGGC	1 cut(s)	2216
NlaIV	GGNNCC	3 cut(s)	775, 838, 1353
NmeAIII	GCCGAG	2 cut(s)	592, 897
NmuCI	GTSAC	2 cut(s)	1594, 1932
NsbI	TGCGCA	1 cut(s)	1544
NsiI	ATGCAT	1 cut(s)	900
NspI	RCATGY	3 cut(s)	1299, 1348, 1909
PaeI	GCATGC	1 cut(s)	1909
PaeR7I	CTCGAG	1 cut(s)	461
PasI	CCCWGGG	1 cut(s)	777
PceI	AGGCCT	2 cut(s)	479, 904
PciI	ACATGT	1 cut(s)	1344
PcsI	WCGNNNNNNNCGW	1 cut(s)	354
PctI	GAATGC	2 cut(s)	870, 954
PdiI	GCCGGC	1 cut(s)	2218
PfeI	GAWTC	5 cut(s)	335, 532, 683, 1322, 2060
PfoI	TCCNGGA	1 cut(s)	588
PleI	GAGTC	3 cut(s)	82, 445, 1478
PpsI	GAGTC	3 cut(s)	82, 445, 1478
PpuMI	RGGWCCY	2 cut(s)	166, 836
PscI	ACATGT	1 cut(s)	1344
Psp124BI	GAGCTC	1 cut(s)	60
Psp5II	RGGWCCY	2 cut(s)	166, 836
Psp6I	CCWGG	2 cut(s)	588, 776
PspFI	CCCAGC	1 cut(s)	90
PspGI	CCWGG	2 cut(s)	588, 776
PspN4I	GGNNCC	3 cut(s)	775, 838, 1353
PspOMI	GGGCCC	1 cut(s)	773
PspPI	GGNCC	8 cut(s)	166, 387, 773, 774, 788, 836, 1063, 2159
PspPPI	RGGWCCY	2 cut(s)	166, 836
PstI	CTGCAG	1 cut(s)	2158
PstNI	CAGNNNCTG	1 cut(s)	2153
PsuI	RGATCY	2 cut(s)	991, 1768
PvuII	CAGCTG	1 cut(s)	2111
RsaI	GTAC	4 cut(s)	599, 1308, 1850, 1959
RsaNI	GTAC	4 cut(s)	598, 1307, 1849, 1958
RseI	CAYNNNNRTG	3 cut(s)	1242, 1502, 2054
SacI	GAGCTC	1 cut(s)	60
SaqAI	TTAA	2 cut(s)	1422, 1551
Sau3AI	GATC	4 cut(s)	151, 991, 1483, 1768
Sau96I	GGNCC	8 cut(s)	166, 387, 773, 774, 788, 836, 1063, 2159
SbfI	CCTGCAGG	1 cut(s)	2158
SchI	GAGTC	3 cut(s)	83, 446, 1479
ScrFI	CCNGG	4 cut(s)	386, 590, 778, 828
SdaI	CCTGCAGG	1 cut(s)	2158
SduI	GDGCHC	4 cut(s)	60, 777, 798, 1987
SfaNI	GCATC	1 cut(s)	2155
SfcI	CTRYAG	1 cut(s)	2154
Sfr274I	CTCGAG	1 cut(s)	461
SinI	GGWCC	3 cut(s)	166, 836, 1063
SlaI	CTCGAG	1 cut(s)	461
SmiMI	CAYNNNNRTG	3 cut(s)	1242, 1502, 2054
SmlI	CTYRAG	4 cut(s)	161, 410, 461, 995
SmoI	CTYRAG	4 cut(s)	161, 410, 461, 995
SphI	GCATGC	1 cut(s)	1909
Sse8387I	CCTGCAGG	1 cut(s)	2158
Sse9I	AATT	7 cut(s)	706, 1133, 1186, 1227, 1438, 1508, 1698
SseBI	AGGCCT	2 cut(s)	479, 904
SspI	AATATT	2 cut(s)	1385, 1789
SspMI	CTAG	5 cut(s)	53, 618, 648, 1271, 2120
SstI	GAGCTC	1 cut(s)	60
StuI	AGGCCT	2 cut(s)	479, 904
StyD4I	CCNGG	4 cut(s)	384, 588, 776, 826
StyI	CCWWGG	4 cut(s)	474, 1490, 1874, 2049
TaaI	ACNGT	6 cut(s)	628, 734, 1262, 1427, 1464, 1989
TaiI	ACGT	4 cut(s)	1180, 1606, 1624, 2195
TaqI	TCGA	9 cut(s)	60, 96, 126, 150, 435, 462, 560, 686, 1040
TaqII	GACCGA	1 cut(s)	482
TasI	AATT	7 cut(s)	706, 1133, 1186, 1227, 1438, 1508, 1698
TatI	WGTACW	1 cut(s)	1306
TauI	GCSGC	6 cut(s)	21, 366, 582, 810, 871, 1284
TfiI	GAWTC	5 cut(s)	335, 532, 683, 1322, 2060
Tru1I	TTAA	2 cut(s)	1422, 1551
Tru9I	TTAA	2 cut(s)	1422, 1551
TscAI	CASTG	3 cut(s)	1603, 1720, 1727
TseFI	GTSAC	2 cut(s)	1594, 1932
TseI	GCWGC	9 cut(s)	448, 457, 502, 1372, 1997, 2020, 2069, 2111, 2132
Tsp45I	GTSAC	2 cut(s)	1594, 1932
TspDTI	ATGAA	8 cut(s)	671, 980, 1001, 1202, 1304, 1490, 1551, 1986
TspGWI	ACGGA	1 cut(s)	624
TspRI	CASTG	3 cut(s)	1603, 1720, 1727
VpaK11BI	GGWCC	3 cut(s)	166, 836, 1063
XapI	RAATTY	1 cut(s)	706
XbaI	TCTAGA	1 cut(s)	1270
XceI	RCATGY	3 cut(s)	1299, 1348, 1909
XhoI	CTCGAG	1 cut(s)	461
XmiI	GTMKAC	1 cut(s)	2195
XspI	CTAG	5 cut(s)	53, 618, 648, 1271, 2120
ZraI	GACGTC	1 cut(s)	1178
Zsp2I	ATGCAT	1 cut(s)	900

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.