Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0011095

Physical Location & Seq

Genomic Coordinates Forward (+)

6053707 .. 6059905

Gene Structure 6199 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG083300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGGAGACCCAATCTGGCGGCAAAGAAGAGACGGCCATCAAAGCAATGCGCCAAGACCTCGAAACCCGAATGGAGTGCCAACGCGCCACCCAGCTCGAACTCCTCTCTTATCTCCAATCCGAAATCGACCCCGCCATCGTCCCCGCCATCGATCTCTCCCTCAAGGTCCTCTCTTCCTTCAACAACCGCCCCTTCACTCCCACCCCTCCTCTACCCGACCCGAAGCCCAACCCCAGAAAGCCCATCGAGCCCGCCCGCCCTCCCTCCCCACAACAACAACCCCAACCCCTCCCTTCGCCCGCCTCCTCCCCCGACCCGACCCGAGAATCCACCCCCGTGGTCATGGACGAGAGCGGCAACCCGCTTTCCGTTATCCGGGCCATGATTGCGGTTCGGTTTCTTGAGAGAGTGCCGTTTATGCTGGTGGAGTCTTCGGAGCTCCTGAAGCAGCTCGAGACCGACGCCAAGGCCTCGCCGGAGGAGAAGCTGGCGCTGCGGGAGGTGGGAGGAGAGAACGGGGGCATTCTGGCGGTGGAGATGGCGCTGCGGTCGATGGCCGAGGAGAACGGCGGCGTTATCCTGGAGGAGTACGCGGTCAACGGAAAGTCAAGGGTTACGGTGAGGGATATTGACCGGACTAGGCTGATGAAGGAGTTGCCGGAGAGCAAGCAAGATTCGATTGTGGATGGGAATGGGAATTTCAATCAGGGTAGTGGCATGGATGCTGGGAATAACAATGGAGGAGGGTTTGTGGGGAGAGGTGGGCCGTGGGTGGTTGGCCCTGAGCCCTACATCAGCGGGTTGCCGCCATTGTTTCCGGGGATAGGTCCCAGAGGGAGAGGGATGATAGGAATGCCGAGAGGGATGATTGGTTCTCCAATGCATAGGCCTAATATGGGGCAGAATGGTGGAATGGTGGTTAGTCCCAACGGAATGCCGAATAAGAGCATGAAGAGTGAAGAGGAAGAGATGAAGGATCTTGAGGCATTGCTGAGTAAGAAGACTTATAGGGAGTTGCAGAAGTCGAAAACTGGGGAGGAGCTTTTGGACCTCATTCACAGGCCAACTGCAAAGGAGACTGCTGTGGCAAACAAGTTCAAAACTAAAGGTGGTTCACAATTGAAGGAATACTGCACATCCCTAACAAAAGAGGATTGCCGACGTCAATCTAATTCCTTGCTCGCTTGTGAGAAGGTTCATTTTAGGCGCATAATTGCTCTACATACTGATGTCAACTTGGGAGACTGTTCTTTTCTAGATACTTGCCGCCACATGAAGACATGCAAGTATGTACATTATGAGCTTGATTCAACACCAGATGTGTCAAACATGTTGGCTCCCCCTAAACCACTAAAGCAGCGTGCTGAATATTGTTCTGAGGTAGAACTTGGTCAACCACAATGGATTAACTGTGATATCCGCAATTTTAGAATGGATATATTGGGACAGTTCGGAGTCATAATGGCTGATCCGCCATGGGACATTCATATGGAATTGCCTTACGGGACTATGGCTGATGATGAAATGCGCACTCTTAATGTTCCTGCATTGCAGACTGATGGTCTGATTTTCCTTTGGGTCACTGGACGTGCGATGGAGCTTGGACGTGAATGTTTAGAACTTTGGGGATACAAGCGTATTGAGGAGATGATTTGGGTGAAAACTAATCAACTGCAACGAATAATTAGAACTGGGCGCACTGGCCACTGGCTAAATCATAGCAAGGAGCATTGCCTCGTTGGAATAAAAGGAGATCCATTAGTAAATAGGAATATTGATACTGATGTCATTGTTGCTGAGGTCAGAGAGACAAGTCGTAAGCCAGACGAGATGTACCCTTTGCTGGAGAGGATTAGTCCAAGGACAAGAAAGCTGGAACTGTTTGCACGCATGCACAACACTCATGCAGGGTATGCTTTCTTGACCGATGGTTGCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008173 GO:0008174 GO:0008757 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016071 GO:0016422 GO:0016556 GO:0016604 GO:0016607 GO:0016740 GO:0016741 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0034641 GO:0034708 GO:0036396 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045293 GO:0046483 GO:0070013 GO:0071704 GO:0080009 GO:0090304 GO:0140098 GO:1901360 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MT-A70

Protein Analysis

646

Amino Acids

72.16

Weight (kDa)

6.06

Isoelectric Point (pI)

50.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MT-A70	PF05063	484 - 637	4.8e-57	MT-A70

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011095)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10760
fragaria_vesca	FvH4_5g11050 FvH4_5g11050
malus_domestica	MD06G1116900.v1.1 MD14G1124400.v1.1
prunus_persica	Prupe.5G128200_v2.0.a1
pyrus_communis	pycom06g10900
rosa_chinensis	RchiOBHm_Chr7g0186271 RchiOBHm_Chr7g0186751
rosa_laevigata	RLG00000004819
rosa_multiflora	Rmu_sc0009734.1_g000004
rosa_roxburghii	Rroxscaffold_3G00267860
rosa_rugosa	Rorug06G0473000 Rorug06G0476300
rosa_samantha	Rh7AG064200 Rh7BG080700 Rh7CG083300 Rh7DG084200
rosa_wichuraiana	Rw7G006690 Rw7G007220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1165
Acc16I	TGCGCA	1 cut(s)	1529
AccBSI	CCGCTC	1 cut(s)	354
AccII	CGCG	2 cut(s)	84, 593
AclWI	GGATC	3 cut(s)	984, 1463, 1748
AcoI	YGGCCR	3 cut(s)	33, 555, 1702
AcsI	RAATTY	1 cut(s)	697
AcuI	CTGAAG	1 cut(s)	464
AcyI	GRCGYC	2 cut(s)	462, 1162
AfaI	GTAC	3 cut(s)	590, 1293, 1835
AfiI	CCNNNNNNNGG	4 cut(s)	375, 824, 896, 1843
AflIII	ACRYGT	1 cut(s)	1329
AgsI	TTSAA	5 cut(s)	181, 703, 1099, 1123, 1311
AhdI	GACNNNNNGTC	1 cut(s)	1560
AjiI	CACGTC	2 cut(s)	1589, 1607
AjnI	CCWGG	1 cut(s)	579
AleI	CACNNNNGTG	1 cut(s)	335
AloI	GAACNNNNNNTCC	2 cut(s)	856, 888
AluBI	AGCT	8 cut(s)	94, 439, 451, 487, 1042, 1303, 1600, 1873
AluI	AGCT	8 cut(s)	94, 439, 451, 487, 1042, 1303, 1600, 1873
Alw21I	GWGCWC	1 cut(s)	441
Alw26I	GTCTC	5 cut(s)	23, 449, 1070, 1236, 1802
AlwI	GGATC	3 cut(s)	984, 1463, 1748
Ama87I	CYCGRG	2 cut(s)	321, 452
AoxI	GGCC	9 cut(s)	33, 378, 468, 555, 764, 778, 887, 1061, 1702
ApeKI	GCWGC	4 cut(s)	448, 493, 544, 1357
ApoI	RAATTY	1 cut(s)	697
AspLEI	GCGC	7 cut(s)	51, 86, 493, 544, 1209, 1530, 1698
AspS9I	GGNCC	6 cut(s)	166, 378, 764, 779, 827, 1048
AsuC2I	CCSGG	2 cut(s)	377, 819
AsuHPI	GGTGA	2 cut(s)	631, 1669
AvaI	CYCGRG	2 cut(s)	321, 452
AvaII	GGWCC	3 cut(s)	166, 827, 1048
BaeI	ACNNNNGTAYC	4 cut(s)	1621, 1654, 1770, 1803
BalI	TGGCCA	1 cut(s)	1704
BanII	GRGCYC	3 cut(s)	252, 441, 789
BbsI	GAAGAC	3 cut(s)	423, 1007, 1283
Bbv12I	GWGCWC	1 cut(s)	441
BbvCI	CCTCAGC	1 cut(s)	1797
BbvI	GCAGC	4 cut(s)	460, 480, 531, 1369
BceAI	ACGGC	4 cut(s)	48, 397, 583, 751
BcgI	CGANNNNNNTGC	2 cut(s)	57, 91
BciT130I	CCWGG	1 cut(s)	581
BciVI	GTATCC	1 cut(s)	1622
BcnI	CCSGG	2 cut(s)	377, 819
BcoDI	GTCTC	5 cut(s)	23, 449, 1070, 1236, 1802
BfaI	CTAG	2 cut(s)	639, 1256
BfoI	RGCGCY	2 cut(s)	494, 545
BfuI	GTATCC	1 cut(s)	1622
BisI	GCNGC	9 cut(s)	19, 355, 449, 494, 545, 571, 806, 1267, 1358
BlsI	GCNGC	9 cut(s)	20, 356, 450, 495, 546, 572, 807, 1268, 1359
Bme1390I	CCNGG	3 cut(s)	377, 581, 819
Bme18I	GGWCC	3 cut(s)	166, 827, 1048
BmeRI	GACNNNNNGTC	1 cut(s)	1560
BmeT110I	CYCGRG	2 cut(s)	321, 452
BmgBI	CACGTC	2 cut(s)	1589, 1607
BmgT120I	GGNCC	6 cut(s)	166, 378, 764, 779, 827, 1048
BmiI	GGNNCC	2 cut(s)	829, 1338
BmrFI	CCNGG	3 cut(s)	377, 581, 819
BmrI	ACTGGG	2 cut(s)	1041, 1701
BmsI	GCATC	1 cut(s)	712
BmuI	ACTGGG	2 cut(s)	1041, 1701
BpiI	GAAGAC	3 cut(s)	423, 1007, 1283
BpmI	CTGGAG	2 cut(s)	602, 1865
Bpu10I	CCTNAGC	2 cut(s)	783, 1797
BpuEI	CTTGAG	3 cut(s)	146, 422, 1001
BpuMI	CCSGG	2 cut(s)	377, 819
Bsa29I	ATCGAT	1 cut(s)	150
BsaHI	GRCGYC	2 cut(s)	462, 1162
BsaI	GGTCTC	1 cut(s)	449
BsaJI	CCNNGG	7 cut(s)	336, 465, 558, 767, 818, 1475, 1859
BsaWI	WCCGGW	1 cut(s)	633
BsaXI	ACNNNNNCTCC	2 cut(s)	735, 765
Bsc4I	CCNNNNNNNGG	4 cut(s)	375, 824, 896, 1843
Bse1I	ACTGG	5 cut(s)	1036, 1588, 1696, 1705, 1712
Bse3DI	GCAATG	4 cut(s)	51, 986, 1547, 1729
BseBI	CCWGG	1 cut(s)	581
BseCI	ATCGAT	1 cut(s)	150
BseDI	CCNNGG	7 cut(s)	336, 465, 558, 767, 818, 1475, 1859
BseGI	GGATG	5 cut(s)	691, 727, 849, 870, 1136
BseLI	CCNNNNNNNGG	4 cut(s)	375, 824, 896, 1843
BseMI	GCAATG	4 cut(s)	51, 986, 1547, 1729
BseMII	CTCAG	4 cut(s)	774, 983, 1368, 1788
BseNI	ACTGG	5 cut(s)	1036, 1588, 1696, 1705, 1712
BseXI	GCAGC	4 cut(s)	460, 480, 531, 1369
BseYI	CCCAGC	2 cut(s)	90, 725
BsgI	GTGCAG	1 cut(s)	1117
Bsh1236I	CGCG	2 cut(s)	84, 593
Bsh1285I	CGRYCG	1 cut(s)	551
BshFI	GGCC	9 cut(s)	35, 380, 470, 557, 766, 780, 889, 1063, 1704
BshVI	ATCGAT	1 cut(s)	150
BsiEI	CGRYCG	1 cut(s)	551
BsiHKAI	GWGCWC	1 cut(s)	441
BsiHKCI	CYCGRG	2 cut(s)	321, 452
BsiSI	CCGG	5 cut(s)	376, 476, 634, 659, 818
BslFI	GGGAC	6 cut(s)	125, 813, 909, 1458, 1493, 1519
BslI	CCNNNNNNNGG	4 cut(s)	375, 824, 896, 1843
BsmAI	GTCTC	5 cut(s)	23, 449, 1070, 1236, 1802
BsmBI	CGTCTC	1 cut(s)	23
BsmFI	GGGAC	6 cut(s)	125, 813, 909, 1458, 1493, 1519
BsmI	GAATGC	3 cut(s)	522, 858, 939
BsnI	GGCC	9 cut(s)	35, 380, 470, 557, 766, 780, 889, 1063, 1704
Bso31I	GGTCTC	1 cut(s)	449
BsoBI	CYCGRG	2 cut(s)	321, 452
Bsp1286I	GDGCHC	3 cut(s)	252, 441, 789
Bsp1407I	TGTACA	1 cut(s)	1291
Bsp143I	GATC	4 cut(s)	151, 976, 1468, 1753
Bsp19I	CCATGG	1 cut(s)	1475
BspANI	GGCC	9 cut(s)	35, 380, 470, 557, 766, 780, 889, 1063, 1704
BspCNI	CTCAG	4 cut(s)	775, 984, 1369, 1789
BspDI	ATCGAT	1 cut(s)	150
BspFNI	CGCG	2 cut(s)	84, 593
BspLI	GGNNCC	2 cut(s)	829, 1338
BspPI	GGATC	3 cut(s)	984, 1463, 1748
BspTNI	GGTCTC	1 cut(s)	449
BsrBI	CCGCTC	1 cut(s)	354
BsrDI	GCAATG	4 cut(s)	51, 986, 1547, 1729
BsrGI	TGTACA	1 cut(s)	1291
BsrI	ACTGG	5 cut(s)	1036, 1588, 1696, 1705, 1712
BssECI	CCNNGG	7 cut(s)	336, 465, 558, 767, 818, 1475, 1859
BssMI	GATC	4 cut(s)	151, 976, 1468, 1753
BssNI	GRCGYC	2 cut(s)	462, 1162
BssT1I	CCWWGG	3 cut(s)	465, 1475, 1859
Bst2UI	CCWGG	1 cut(s)	581
Bst4CI	ACNGT	5 cut(s)	619, 1247, 1412, 1449, 1881
Bst6I	CTCTTC	5 cut(s)	21, 178, 947, 954, 960
BstACI	GRCGYC	2 cut(s)	462, 1162
BstAPI	GCANNNNNTGC	1 cut(s)	1913
BstAUI	TGTACA	1 cut(s)	1291
BstC8I	GCNNGC	9 cut(s)	252, 256, 300, 489, 668, 1182, 1362, 1888, 1892
BstDEI	CTNAG	4 cut(s)	783, 992, 1377, 1797
BstDSI	CCRYGG	3 cut(s)	336, 767, 1475
BstF5I	GGATG	5 cut(s)	691, 727, 849, 870, 1136
BstFNI	CGCG	2 cut(s)	84, 593
BstH2I	RGCGCY	2 cut(s)	494, 545
BstHHI	GCGC	7 cut(s)	51, 86, 493, 544, 1209, 1530, 1698
BstKTI	GATC	4 cut(s)	154, 979, 1471, 1756
BstMAI	GTCTC	5 cut(s)	23, 449, 1070, 1236, 1802
BstMBI	GATC	4 cut(s)	151, 976, 1468, 1753
BstMCI	CGRYCG	1 cut(s)	551
BstMWI	GCNNNNNNNGC	7 cut(s)	41, 247, 386, 418, 445, 493, 1913
BstNI	CCWGG	1 cut(s)	581
BstNSI	RCATGY	3 cut(s)	1284, 1333, 1894
BstSCI	CCNGG	3 cut(s)	375, 579, 817
BstUI	CGCG	2 cut(s)	84, 593
BstV1I	GCAGC	4 cut(s)	460, 480, 531, 1369
BstV2I	GAAGAC	3 cut(s)	423, 1007, 1283
BstX2I	RGATCY	2 cut(s)	976, 1753
BstXI	CCANNNNNNTGG	1 cut(s)	337
BstYI	RGATCY	2 cut(s)	976, 1753
Bsu15I	ATCGAT	1 cut(s)	150
BsuI	GTATCC	1 cut(s)	1622
BsuRI	GGCC	9 cut(s)	35, 380, 470, 557, 766, 780, 889, 1063, 1704
BsuTUI	ATCGAT	1 cut(s)	150
BtgI	CCRYGG	3 cut(s)	336, 767, 1475
BtgZI	GCGATG	1 cut(s)	1607
BtrI	CACGTC	2 cut(s)	1589, 1607
BtsCI	GGATG	5 cut(s)	691, 727, 849, 870, 1136
BtsIMutI	CAGTG	3 cut(s)	1581, 1698, 1705
Cac8I	GCNNGC	9 cut(s)	252, 256, 300, 489, 668, 1182, 1362, 1888, 1892
CfoI	GCGC	7 cut(s)	51, 86, 493, 544, 1209, 1530, 1698
Cfr13I	GGNCC	6 cut(s)	166, 378, 764, 779, 827, 1048
ClaI	ATCGAT	1 cut(s)	150
CseI	GACGC	1 cut(s)	470
Csp6I	GTAC	3 cut(s)	589, 1292, 1834
CviQI	GTAC	3 cut(s)	589, 1292, 1834
DdeI	CTNAG	4 cut(s)	783, 992, 1377, 1797
DpnI	GATC	4 cut(s)	153, 978, 1470, 1755
DpnII	GATC	4 cut(s)	151, 976, 1468, 1753
DriI	GACNNNNNGTC	1 cut(s)	1560
EaeI	YGGCCR	3 cut(s)	33, 555, 1702
Eam1104I	CTCTTC	5 cut(s)	21, 178, 947, 954, 960
Eam1105I	GACNNNNNGTC	1 cut(s)	1560
EarI	CTCTTC	5 cut(s)	21, 178, 947, 954, 960
EciI	GGCGGA	1 cut(s)	1461
Ecl136II	GAGCTC	1 cut(s)	439
Eco130I	CCWWGG	3 cut(s)	465, 1475, 1859
Eco147I	AGGCCT	2 cut(s)	470, 889
Eco24I	GRGCYC	3 cut(s)	252, 441, 789
Eco31I	GGTCTC	1 cut(s)	449
Eco32I	GATATC	1 cut(s)	1417
Eco47I	GGWCC	3 cut(s)	166, 827, 1048
Eco53kI	GAGCTC	1 cut(s)	439
Eco57I	CTGAAG	1 cut(s)	464
Eco88I	CYCGRG	2 cut(s)	321, 452
EcoICRI	GAGCTC	1 cut(s)	439
EcoO109I	RGGNCCY	2 cut(s)	166, 827
EcoRII	CCWGG	1 cut(s)	579
EcoRV	GATATC	1 cut(s)	1417
EcoT14I	CCWWGG	3 cut(s)	465, 1475, 1859
EcoT22I	ATGCAT	1 cut(s)	885
EcoT38I	GRGCYC	3 cut(s)	252, 441, 789
ErhI	CCWWGG	3 cut(s)	465, 1475, 1859
Esp3I	CGTCTC	1 cut(s)	23
FaqI	GGGAC	6 cut(s)	125, 813, 909, 1458, 1493, 1519
FauI	CCCGC	8 cut(s)	139, 151, 259, 263, 307, 369, 489, 791
FauNDI	CATATG	1 cut(s)	1488
Fnu4HI	GCNGC	9 cut(s)	19, 355, 449, 494, 545, 571, 806, 1267, 1358
FokI	GGATG	5 cut(s)	698, 734, 856, 877, 1123
FriOI	GRGCYC	3 cut(s)	252, 441, 789
Fsp4HI	GCNGC	9 cut(s)	19, 355, 449, 494, 545, 571, 806, 1267, 1358
FspAI	RTGCGCAY	1 cut(s)	1529
FspBI	CTAG	2 cut(s)	639, 1256
FspI	TGCGCA	1 cut(s)	1529
GlaI	GCGC	7 cut(s)	50, 85, 492, 543, 1208, 1529, 1697
GluI	GCNGC	9 cut(s)	19, 355, 449, 494, 545, 571, 806, 1267, 1358
GsaI	CCCAGC	2 cut(s)	94, 729
GsuI	CTGGAG	2 cut(s)	602, 1865
HaeII	RGCGCY	2 cut(s)	494, 545
HaeIII	GGCC	9 cut(s)	35, 380, 470, 557, 766, 780, 889, 1063, 1704
HapII	CCGG	5 cut(s)	376, 476, 634, 659, 818
HgaI	GACGC	1 cut(s)	470
HhaI	GCGC	7 cut(s)	51, 86, 493, 544, 1209, 1530, 1698
Hin1I	GRCGYC	2 cut(s)	462, 1162
Hin6I	GCGC	7 cut(s)	49, 84, 491, 542, 1207, 1528, 1696
HinP1I	GCGC	7 cut(s)	49, 84, 491, 542, 1207, 1528, 1696
HincII	GTYRAC	3 cut(s)	598, 1234, 1394
HindII	GTYRAC	3 cut(s)	598, 1234, 1394
HinfI	GANTC	5 cut(s)	326, 428, 674, 1307, 1455
HpaII	CCGG	5 cut(s)	376, 476, 634, 659, 818
HphI	GGTGA	2 cut(s)	631, 1669
Hpy166II	GTNNAC	4 cut(s)	598, 1115, 1234, 1394
Hpy188I	TCNGA	6 cut(s)	121, 436, 1378, 1454, 1566, 1805
Hpy188III	TCNNGA	6 cut(s)	401, 442, 454, 980, 1256, 1921
Hpy8I	GTNNAC	4 cut(s)	598, 1115, 1234, 1394
Hpy99I	CGWCG	2 cut(s)	464, 1164
HpyAV	CCTTC	7 cut(s)	187, 202, 303, 643, 967, 1117, 1186
HpyCH4III	ACNGT	5 cut(s)	619, 1247, 1412, 1449, 1881
HpyCH4IV	ACGT	3 cut(s)	1162, 1588, 1606
HpyF10VI	GCNNNNNNNGC	7 cut(s)	41, 247, 386, 418, 445, 493, 1913
HpyF3I	CTNAG	4 cut(s)	783, 992, 1377, 1797
HpySE526I	ACGT	3 cut(s)	1162, 1588, 1606
Hsp92I	GRCGYC	2 cut(s)	462, 1162
HspAI	GCGC	7 cut(s)	49, 84, 491, 542, 1207, 1528, 1696
Kzo9I	GATC	4 cut(s)	151, 976, 1468, 1753
LmnI	GCTCC	6 cut(s)	436, 444, 1039, 1342, 1597, 1726
Lsp1109I	GCAGC	4 cut(s)	460, 480, 531, 1369
LweI	GCATC	1 cut(s)	712
MaeI	CTAG	2 cut(s)	639, 1256
MaeII	ACGT	3 cut(s)	1162, 1588, 1606
MaeIII	GTNAC	2 cut(s)	613, 1579
MalI	GATC	4 cut(s)	153, 978, 1470, 1755
MbiI	CCGCTC	1 cut(s)	354
MboI	GATC	4 cut(s)	151, 976, 1468, 1753
MboII	GAAGA	8 cut(s)	38, 165, 423, 964, 971, 977, 1012, 1288
MfeI	CAATTG	2 cut(s)	1118, 1936
MflI	RGATCY	2 cut(s)	976, 1753
MhlI	GDGCHC	3 cut(s)	252, 441, 789
MlsI	TGGCCA	1 cut(s)	1704
MluCI	AATT	8 cut(s)	697, 1118, 1171, 1212, 1423, 1493, 1683, 1936
MluNI	TGGCCA	1 cut(s)	1704
MlyI	GAGTC	2 cut(s)	437, 1464
MmeI	TCCRAC	1 cut(s)	1720
Mox20I	TGGCCA	1 cut(s)	1704
Mph1103I	ATGCAT	1 cut(s)	885
MscI	TGGCCA	1 cut(s)	1704
MseI	TTAA	2 cut(s)	1407, 1536
MslI	CAYNNNNRTG	3 cut(s)	335, 1227, 1487
Msp20I	TGGCCA	1 cut(s)	1704
MspA1I	CMGCKG	1 cut(s)	798
MspI	CCGG	5 cut(s)	376, 476, 634, 659, 818
MspR9I	CCNGG	3 cut(s)	377, 581, 819
MunI	CAATTG	2 cut(s)	1118, 1936
Mva1269I	GAATGC	3 cut(s)	522, 858, 939
MvaI	CCWGG	1 cut(s)	581
MvnI	CGCG	2 cut(s)	84, 593
MwoI	GCNNNNNNNGC	7 cut(s)	41, 247, 386, 418, 445, 493, 1913
NciI	CCSGG	2 cut(s)	377, 819
NcoI	CCATGG	1 cut(s)	1475
NdeI	CATATG	1 cut(s)	1488
NdeII	GATC	4 cut(s)	151, 976, 1468, 1753
NlaIV	GGNNCC	2 cut(s)	829, 1338
NmeAIII	GCCGAG	2 cut(s)	583, 882
NmuCI	GTSAC	1 cut(s)	1579
NsbI	TGCGCA	1 cut(s)	1529
NsiI	ATGCAT	1 cut(s)	885
NspI	RCATGY	3 cut(s)	1284, 1333, 1894
OliI	CACNNNNGTG	1 cut(s)	335
PaeI	GCATGC	1 cut(s)	1894
PaeR7I	CTCGAG	1 cut(s)	452
PceI	AGGCCT	2 cut(s)	470, 889
PciI	ACATGT	1 cut(s)	1329
PctI	GAATGC	3 cut(s)	522, 858, 939
PfeI	GAWTC	3 cut(s)	326, 674, 1307
PfoI	TCCNGGA	1 cut(s)	579
PkrI	GCNGC	9 cut(s)	20, 356, 450, 495, 546, 572, 807, 1268, 1359
PleI	GAGTC	2 cut(s)	436, 1463
PpsI	GAGTC	2 cut(s)	436, 1463
PpuMI	RGGWCCY	2 cut(s)	166, 827
PscI	ACATGT	1 cut(s)	1329
Psp124BI	GAGCTC	1 cut(s)	441
Psp5II	RGGWCCY	2 cut(s)	166, 827
Psp6I	CCWGG	1 cut(s)	579
PspFI	CCCAGC	2 cut(s)	90, 725
PspGI	CCWGG	1 cut(s)	579
PspN4I	GGNNCC	2 cut(s)	829, 1338
PspPI	GGNCC	6 cut(s)	166, 378, 764, 779, 827, 1048
PspPPI	RGGWCCY	2 cut(s)	166, 827
PsuI	RGATCY	2 cut(s)	976, 1753
RsaI	GTAC	3 cut(s)	590, 1293, 1835
RsaNI	GTAC	3 cut(s)	589, 1292, 1834
RseI	CAYNNNNRTG	3 cut(s)	335, 1227, 1487
SacI	GAGCTC	1 cut(s)	441
SaqAI	TTAA	2 cut(s)	1407, 1536
SatI	GCNGC	9 cut(s)	19, 355, 449, 494, 545, 571, 806, 1267, 1358
Sau3AI	GATC	4 cut(s)	151, 976, 1468, 1753
Sau96I	GGNCC	6 cut(s)	166, 378, 764, 779, 827, 1048
SchI	GAGTC	2 cut(s)	437, 1464
ScrFI	CCNGG	3 cut(s)	377, 581, 819
SduI	GDGCHC	3 cut(s)	252, 441, 789
SfaNI	GCATC	1 cut(s)	712
Sfr274I	CTCGAG	1 cut(s)	452
SinI	GGWCC	3 cut(s)	166, 827, 1048
SlaI	CTCGAG	1 cut(s)	452
SmiMI	CAYNNNNRTG	3 cut(s)	335, 1227, 1487
SmlI	CTYRAG	4 cut(s)	161, 401, 452, 980
SmoI	CTYRAG	4 cut(s)	161, 401, 452, 980
SphI	GCATGC	1 cut(s)	1894
Sse9I	AATT	8 cut(s)	697, 1118, 1171, 1212, 1423, 1493, 1683, 1936
SseBI	AGGCCT	2 cut(s)	470, 889
SspI	AATATT	2 cut(s)	1370, 1774
SspMI	CTAG	2 cut(s)	639, 1256
SstI	GAGCTC	1 cut(s)	441
StuI	AGGCCT	2 cut(s)	470, 889
StyD4I	CCNGG	3 cut(s)	375, 579, 817
StyI	CCWWGG	3 cut(s)	465, 1475, 1859
TaaI	ACNGT	5 cut(s)	619, 1247, 1412, 1449, 1881
TaiI	ACGT	3 cut(s)	1165, 1591, 1609
TaqI	TCGA	9 cut(s)	60, 96, 126, 150, 246, 453, 551, 677, 1025
TaqII	GACCGA	2 cut(s)	473, 1940
TasI	AATT	8 cut(s)	697, 1118, 1171, 1212, 1423, 1493, 1683, 1936
TatI	WGTACW	1 cut(s)	1291
TauI	GCSGC	5 cut(s)	21, 357, 573, 808, 1269
TfiI	GAWTC	3 cut(s)	326, 674, 1307
Tru1I	TTAA	2 cut(s)	1407, 1536
Tru9I	TTAA	2 cut(s)	1407, 1536
TscAI	CASTG	3 cut(s)	1588, 1705, 1712
TseFI	GTSAC	1 cut(s)	1579
TseI	GCWGC	4 cut(s)	448, 493, 544, 1357
Tsp45I	GTSAC	1 cut(s)	1579
TspDTI	ATGAA	7 cut(s)	662, 965, 986, 1187, 1289, 1475, 1536
TspGWI	ACGGA	3 cut(s)	358, 615, 945
TspRI	CASTG	3 cut(s)	1588, 1705, 1712
VpaK11BI	GGWCC	3 cut(s)	166, 827, 1048
XapI	RAATTY	1 cut(s)	697
XbaI	TCTAGA	1 cut(s)	1255
XceI	RCATGY	3 cut(s)	1284, 1333, 1894
XhoI	CTCGAG	1 cut(s)	452
XspI	CTAG	2 cut(s)	639, 1256
ZraI	GACGTC	1 cut(s)	1163
Zsp2I	ATGCAT	1 cut(s)	885

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.