MD06G1169700.v1.1

UBA-like domain (DUF1421)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0013667
Physical Location & Seq
Reverse (-)
31033696 .. 31036585
2890 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1169700.v1.1.491

Sequence Viewer

Length: 1590 bp
ATGAAGACGACGGAGTTCATGGATAAGCAGATCATGGAACTCTCTCGGTCCCACTCCGAGGATTTCTCTCAACTTTCGTACCCTCAACAATTCGATAACGACGACAAGGACGACGACGACGACTCCGTTTCCAGCTTTCAGTTCCGCCCCGCACGACGTGTCGCCTCGCAGGAGCCGAGCATTTCCGCTCTCGAGAGTGGCAGTTCTATGGACTACCTTAACCTTGCAAAATCTGGAAGCAAGTATGTTGTCCAGGCTTGCGAGGATTCGGCACTGATTTCGGTGATTGAGCGAAAGATGAACCAGCATTTTGGCAATCTGTTGCACGCGGTGGAGGGTCTCAGTGCACGAATTTCCCAGCTGGAGACTCGATTACGCCGGCTGGGGAATTCTGTTGACGACTTCAAGGATTCTACTGAAATCAACCATGGGAAGGCTGATGGGAAACTGAGGCAGCTAGAGAATATGCTAAGAGAGGTTGACAGTGGCATGCAGAATTTGAGAGATAAACAAGAGATAACAGAGGCTCGGTTGGAGCTTGCAAAGCTTCAAATGTTAAAGGGTCAGCAGCAATCGGAAAACCAAGCGAGCAATGTACAAAAAGTTTCATCTCCAGGAGTACAATCATCCGCTCCTCAGCAAAGCTACCAACTGCATTCAGTTCAGGCCCCCACCCTACAAGTTCCTTCTCTTCCTACTAATGATCCCGGAACTCTACCTCATCAGAATTTTCCTCCAGCACCTACAGCACAGGTCCCCACGCAGTCACCTCAGAGTCAAATCCCATCTATTCAATATGCAGATTCTAACTACTCACCACCTGTGCCAAATCCGCAGCCCACACCTCAGATGTACTACAGCTCTCAAGTACAGCATTCGCAACCGCCACCCACTGCACCTTATCAACTTTTTCCATCAGCACCACATCCTTCACTAACCTCACAATCGCCGCAGCTGCCTCAACAGCACCCACCTTTCAATGCTGTTGATCACCAAGCCCAGTTTTCGTTGGTTCATAATCCTGGAGAAACCTCCATACCATCTCAAAGATATCCTCCAAGCTTCCACAACACCTCTAATGCACCTGGCTTGGCTCTCCCACCCCAACAACAGCAGTATGCGGGTTCCATGCAATATACGCATGATCAAACCGCAAGCAATCACAACCTGGAGTTTCCCCCTGGGCATGTGCAACCAGTTCAAAATTCACGTTTTGATGCTTTTCGTTCCCACGTTGGATCTTCATCTCACAACAGCGGTTCAAACATGAAACATTCGCAAGTCTCGCCAGCCTCTTTAGACCGTTCTGGTGGAAGCAGCTTTTCGAAACTGCCAACTGCCAAGGTATTGCCACACGCAATACCCATGGCTGCTAGTGTGGACAAGGAATCAAGTTCCAGTGGGACTGGAAACAGAATACCGATTGATAATGTCATTGATAAGGTTGTCGCGATGGGATTCCGGAGGGACATGGTCCGAGCAACAGTGAGGAAAATGACTGAGAATGGGCAGTCGGTGGACGTTAATGTTGTGCTGGATAAGCTGATGAACAATGGAGAACAGCCTCAAAATGGTGGATTTGGCCGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1421

Protein Analysis

530

Amino Acids

58.1

Weight (kDa)

6.17

Isoelectric Point (pI)

63.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1421 PF07223 475 - 519 7.7e-20 UBA-like domain (DUF1421)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013667)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g05870 FvH4_5g05870
malus_domestica MD06G1169700.v1.1 MD14G1175200.v1.1
prunus_persica Prupe.5G168500_v2.0.a1
pyrus_communis pycom06g15100 pycom14g14620
rosa_chinensis RchiOBHm_Chr7g0192951
rosa_laevigata RLG00000004309
rosa_multiflora Rmu_sc0002040.1_g000061
rosa_roxburghii Rroxscaffold_3G00262510
rosa_rugosa Rorug07G0006400 Rorug07G0294800
rosa_samantha Rh7AG131600 Rh7BG132500 Rh7CG135700 Rh7DG133600
rosa_wichuraiana Rw7G011230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 188, 632
AccII CGCG 2 cut(s) 329, 1451
AccIII TCCGGA 1 cut(s) 1461
AclWI GGATC 2 cut(s) 698, 1246
AcoI YGGCCR 1 cut(s) 1582
AcsI RAATTY 5 cut(s) 351, 388, 496, 727, 1204
AdeI CACNNNGTG 2 cut(s) 158, 331
AfaI GTAC 5 cut(s) 80, 597, 621, 854, 870
AfiI CCNNNNNNNGG 3 cut(s) 58, 433, 1571
AflIII ACRYGT 1 cut(s) 157
AgsI TTSAA 6 cut(s) 406, 551, 794, 979, 1202, 1263
AjiI CACGTC 1 cut(s) 158
AjnI CCWGG 6 cut(s) 252, 613, 1021, 1084, 1167, 1180
Alw21I GWGCWC 1 cut(s) 349
Alw26I GTCTC 3 cut(s) 344, 359, 1288
Alw44I GTGCAC 1 cut(s) 345
AlwI GGATC 2 cut(s) 698, 1246
Ama87I CYCGRG 1 cut(s) 191
Aor13HI TCCGGA 1 cut(s) 1461
AoxI GGCC 2 cut(s) 666, 1582
ApaLI GTGCAC 1 cut(s) 345
ApeKI GCWGC 7 cut(s) 454, 568, 835, 952, 955, 1317, 1370
ApoI RAATTY 5 cut(s) 351, 388, 496, 727, 1204
AspS9I GGNCC 4 cut(s) 48, 667, 754, 1474
AsuC2I CCSGG 1 cut(s) 708
AsuHPI GGTGA 4 cut(s) 295, 759, 807, 983
AsuII TTCGAA 1 cut(s) 1325
AvaI CYCGRG 1 cut(s) 191
AvaII GGWCC 3 cut(s) 48, 754, 1474
BaeGI GKGCMC 1 cut(s) 349
BaeI ACNNNNGTAYC 2 cut(s) 62, 95
BbsI GAAGAC 1 cut(s) 11
Bbv12I GWGCWC 1 cut(s) 349
BbvCI CCTCAGC 1 cut(s) 636
BbvI GCAGC 7 cut(s) 466, 580, 847, 942, 964, 1329, 1357
BccI CCATC 5 cut(s) 434, 793, 922, 1048, 1447
BcgI CGANNNNNNTGC 2 cut(s) 261, 295
BciT130I CCWGG 6 cut(s) 254, 615, 1023, 1086, 1169, 1182
BclI TGATCA 2 cut(s) 988, 1144
BcnI CCSGG 1 cut(s) 708
BcoDI GTCTC 3 cut(s) 344, 359, 1288
BfaI CTAG 2 cut(s) 458, 1374
BfmI CTRYAG 2 cut(s) 744, 856
BisI GCNGC 8 cut(s) 455, 569, 836, 950, 953, 956, 1318, 1371
BlsI GCNGC 8 cut(s) 456, 570, 837, 951, 954, 957, 1319, 1372
Bme1390I CCNGG 7 cut(s) 254, 615, 708, 1023, 1086, 1169, 1182
Bme18I GGWCC 3 cut(s) 48, 754, 1474
BmeT110I CYCGRG 1 cut(s) 191
BmgBI CACGTC 1 cut(s) 158
BmgT120I GGNCC 4 cut(s) 48, 667, 754, 1474
BmiI GGNNCC 5 cut(s) 50, 174, 669, 756, 1126
BmrFI CCNGG 7 cut(s) 254, 615, 708, 1023, 1086, 1169, 1182
BmrI ACTGGG 1 cut(s) 994
BmsI GCATC 1 cut(s) 1207
BmuI ACTGGG 1 cut(s) 994
BpiI GAAGAC 1 cut(s) 11
BplI GAGNNNNNCTC 2 cut(s) 50, 82
BpmI CTGGAG 5 cut(s) 383, 597, 720, 1044, 1190
Bpu10I CCTNAGC 1 cut(s) 636
Bpu14I TTCGAA 1 cut(s) 1325
BpuEI CTTGAG 1 cut(s) 849
BpuMI CCSGG 1 cut(s) 708
BsaBI GATNNNNATC 1 cut(s) 1243
BsaI GGTCTC 1 cut(s) 344
BsaJI CCNNGG 6 cut(s) 57, 427, 1180, 1181, 1341, 1365
BsaWI WCCGGW 1 cut(s) 1461
BsaXI ACNNNNNCTCC 2 cut(s) 107, 137
Bsc4I CCNNNNNNNGG 3 cut(s) 58, 433, 1571
Bse118I RCCGGY 2 cut(s) 378, 1584
Bse1I ACTGG 4 cut(s) 1000, 1196, 1398, 1411
Bse3DI GCAATG 1 cut(s) 598
Bse8I GATNNNNATC 1 cut(s) 1243
BseAI TCCGGA 1 cut(s) 1461
BseBI CCWGG 6 cut(s) 254, 615, 1023, 1086, 1169, 1182
BseDI CCNNGG 6 cut(s) 57, 427, 1180, 1181, 1341, 1365
BseGI GGATG 2 cut(s) 626, 925
BseJI GATNNNNATC 1 cut(s) 1243
BseLI CCNNNNNNNGG 3 cut(s) 58, 433, 1571
BseMI GCAATG 1 cut(s) 598
BseMII CTCAG 6 cut(s) 355, 440, 650, 785, 860, 1491
BseNI ACTGG 4 cut(s) 1000, 1196, 1398, 1411
BseRI GAGGAG 1 cut(s) 624
BseSI GKGCMC 1 cut(s) 349
BseXI GCAGC 7 cut(s) 466, 580, 847, 942, 964, 1329, 1357
BseYI CCCAGC 2 cut(s) 357, 382
BsgI GTGCAG 1 cut(s) 879
Bsh1236I CGCG 2 cut(s) 329, 1451
BshFI GGCC 2 cut(s) 668, 1584
BsiHKAI GWGCWC 1 cut(s) 349
BsiHKCI CYCGRG 1 cut(s) 191
BsiSI CCGG 4 cut(s) 379, 708, 1462, 1585
BslFI GGGAC 4 cut(s) 34, 740, 1417, 1481
BslI CCNNNNNNNGG 3 cut(s) 58, 433, 1571
BsmAI GTCTC 3 cut(s) 344, 359, 1288
BsmFI GGGAC 4 cut(s) 34, 740, 1417, 1481
BsmI GAATGC 2 cut(s) 655, 874
BsnI GGCC 2 cut(s) 668, 1584
Bso31I GGTCTC 1 cut(s) 344
BsoBI CYCGRG 1 cut(s) 191
Bsp119I TTCGAA 1 cut(s) 1325
Bsp1286I GDGCHC 1 cut(s) 349
Bsp13I TCCGGA 1 cut(s) 1461
Bsp1407I TGTACA 1 cut(s) 595
Bsp143I GATC 5 cut(s) 30, 703, 988, 1144, 1238
Bsp19I CCATGG 2 cut(s) 427, 1365
Bsp68I TCGCGA 1 cut(s) 1451
BspANI GGCC 2 cut(s) 668, 1584
BspCNI CTCAG 6 cut(s) 354, 441, 649, 784, 859, 1492
BspEI TCCGGA 1 cut(s) 1461
BspFNI CGCG 2 cut(s) 329, 1451
BspLI GGNNCC 5 cut(s) 50, 174, 669, 756, 1126
BspPI GGATC 2 cut(s) 698, 1246
BspT104I TTCGAA 1 cut(s) 1325
BspTNI GGTCTC 1 cut(s) 344
BsrBI CCGCTC 2 cut(s) 188, 632
BsrDI GCAATG 1 cut(s) 598
BsrFI RCCGGY 2 cut(s) 378, 1584
BsrGI TGTACA 1 cut(s) 595
BsrI ACTGG 4 cut(s) 1000, 1196, 1398, 1411
BssAI RCCGGY 2 cut(s) 378, 1584
BssECI CCNNGG 6 cut(s) 57, 427, 1180, 1181, 1341, 1365
BssMI GATC 5 cut(s) 30, 703, 988, 1144, 1238
BssT1I CCWWGG 3 cut(s) 427, 1341, 1365
Bst2UI CCWGG 6 cut(s) 254, 615, 1023, 1086, 1169, 1182
Bst4CI ACNGT 3 cut(s) 485, 1304, 1486
Bst6I CTCTTC 1 cut(s) 696
BstAUI TGTACA 1 cut(s) 595
BstBI TTCGAA 1 cut(s) 1325
BstC8I GCNNGC 8 cut(s) 259, 327, 380, 491, 540, 589, 1156, 1290
BstDEI CTNAG 7 cut(s) 341, 449, 470, 636, 771, 846, 1500
BstDSI CCRYGG 2 cut(s) 427, 1365
BstF5I GGATG 2 cut(s) 626, 925
BstFNI CGCG 2 cut(s) 329, 1451
BstKTI GATC 5 cut(s) 33, 706, 991, 1147, 1241
BstMAI GTCTC 3 cut(s) 344, 359, 1288
BstMBI GATC 5 cut(s) 30, 703, 988, 1144, 1238
BstMWI GCNNNNNNNGC 8 cut(s) 544, 746, 832, 955, 964, 1138, 1285, 1540
BstNI CCWGG 6 cut(s) 254, 615, 1023, 1086, 1169, 1182
BstNSI RCATGY 2 cut(s) 493, 1190
BstSCI CCNGG 7 cut(s) 252, 613, 706, 1021, 1084, 1167, 1180
BstSFI CTRYAG 2 cut(s) 744, 856
BstSLI GKGCMC 1 cut(s) 349
BstUI CGCG 2 cut(s) 329, 1451
BstV1I GCAGC 7 cut(s) 466, 580, 847, 942, 964, 1329, 1357
BstV2I GAAGAC 1 cut(s) 11
BstX2I RGATCY 1 cut(s) 1238
BstXI CCANNNNNNTGG 1 cut(s) 311
BstYI RGATCY 1 cut(s) 1238
BsuRI GGCC 2 cut(s) 668, 1584
BtgI CCRYGG 2 cut(s) 427, 1365
BtgZI GCGATG 1 cut(s) 1466
BtrI CACGTC 1 cut(s) 158
BtsCI GGATG 2 cut(s) 626, 925
BtsI GCAGTG 1 cut(s) 891
BtsIMutI CAGTG 6 cut(s) 272, 349, 490, 891, 1405, 1491
BtuMI TCGCGA 1 cut(s) 1451
Cac8I GCNNGC 8 cut(s) 259, 327, 380, 491, 540, 589, 1156, 1290
Cfr10I RCCGGY 2 cut(s) 378, 1584
Cfr13I GGNCC 4 cut(s) 48, 667, 754, 1474
Csp6I GTAC 5 cut(s) 79, 596, 620, 853, 869
CviQI GTAC 5 cut(s) 79, 596, 620, 853, 869
DdeI CTNAG 7 cut(s) 341, 449, 470, 636, 771, 846, 1500
DpnI GATC 5 cut(s) 32, 705, 990, 1146, 1240
DpnII GATC 5 cut(s) 30, 703, 988, 1144, 1238
DraIII CACNNNGTG 2 cut(s) 158, 331
EaeI YGGCCR 1 cut(s) 1582
Eam1104I CTCTTC 1 cut(s) 696
EarI CTCTTC 1 cut(s) 696
EciI GGCGGA 1 cut(s) 134
Eco130I CCWWGG 3 cut(s) 427, 1341, 1365
Eco31I GGTCTC 1 cut(s) 344
Eco32I GATATC 1 cut(s) 1052
Eco47I GGWCC 3 cut(s) 48, 754, 1474
Eco88I CYCGRG 1 cut(s) 191
EcoO109I RGGNCCY 2 cut(s) 667, 754
EcoRI GAATTC 1 cut(s) 388
EcoRII CCWGG 6 cut(s) 252, 613, 1021, 1084, 1167, 1180
EcoRV GATATC 1 cut(s) 1052
EcoT14I CCWWGG 3 cut(s) 427, 1341, 1365
ErhI CCWWGG 3 cut(s) 427, 1341, 1365
FaqI GGGAC 4 cut(s) 34, 740, 1417, 1481
FauI CCCGC 2 cut(s) 157, 1114
FbaI TGATCA 2 cut(s) 988, 1144
Fnu4HI GCNGC 8 cut(s) 455, 569, 836, 950, 953, 956, 1318, 1371
FokI GGATG 2 cut(s) 613, 912
Fsp4HI GCNGC 8 cut(s) 455, 569, 836, 950, 953, 956, 1318, 1371
FspBI CTAG 2 cut(s) 458, 1374
GluI GCNGC 8 cut(s) 455, 569, 836, 950, 953, 956, 1318, 1371
GsaI CCCAGC 2 cut(s) 361, 386
GsuI CTGGAG 5 cut(s) 383, 597, 720, 1044, 1190
HaeIII GGCC 2 cut(s) 668, 1584
HapII CCGG 4 cut(s) 379, 708, 1462, 1585
HincII GTYRAC 2 cut(s) 397, 481
HindII GTYRAC 2 cut(s) 397, 481
HindIII AAGCTT 2 cut(s) 545, 1060
HinfI GANTC 8 cut(s) 122, 266, 367, 410, 775, 803, 1388, 1458
HpaII CCGG 4 cut(s) 379, 708, 1462, 1585
HphI GGTGA 4 cut(s) 295, 759, 807, 983
Hpy166II GTNNAC 5 cut(s) 347, 397, 481, 1381, 1519
Hpy188I TCNGA 6 cut(s) 58, 577, 726, 774, 849, 1478
Hpy188III TCNNGA 5 cut(s) 191, 193, 234, 1450, 1462
Hpy8I GTNNAC 5 cut(s) 347, 397, 481, 1381, 1519
Hpy99I CGWCG 6 cut(s) 13, 104, 116, 119, 122, 159
HpyAV CCTTC 3 cut(s) 427, 696, 939
HpyCH4III ACNGT 3 cut(s) 485, 1304, 1486
HpyCH4IV ACGT 4 cut(s) 157, 1210, 1233, 1521
HpyF10VI GCNNNNNNNGC 8 cut(s) 544, 746, 832, 955, 964, 1138, 1285, 1540
HpyF3I CTNAG 7 cut(s) 341, 449, 470, 636, 771, 846, 1500
HpySE526I ACGT 4 cut(s) 157, 1210, 1233, 1521
Kpn2I TCCGGA 1 cut(s) 1461
KroI GCCGGC 1 cut(s) 378
KroNI GCCGGC 1 cut(s) 380
Ksp22I TGATCA 2 cut(s) 988, 1144
Kzo9I GATC 5 cut(s) 30, 703, 988, 1144, 1238
LmnI GCTCC 3 cut(s) 172, 535, 637
Lsp1109I GCAGC 7 cut(s) 466, 580, 847, 942, 964, 1329, 1357
LweI GCATC 1 cut(s) 1207
MaeI CTAG 2 cut(s) 458, 1374
MaeII ACGT 4 cut(s) 157, 1210, 1233, 1521
MaeIII GTNAC 1 cut(s) 765
MalI GATC 5 cut(s) 32, 705, 990, 1146, 1240
MbiI CCGCTC 2 cut(s) 188, 632
MboI GATC 5 cut(s) 30, 703, 988, 1144, 1238
MboII GAAGA 3 cut(s) 16, 683, 1233
MflI RGATCY 1 cut(s) 1238
MhlI GDGCHC 1 cut(s) 349
MluCI AATT 6 cut(s) 89, 351, 388, 496, 727, 1204
MlyI GAGTC 3 cut(s) 116, 361, 784
MmeI TCCRAC 2 cut(s) 513, 1216
MroI TCCGGA 1 cut(s) 1461
MroNI GCCGGC 1 cut(s) 378
MseI TTAA 3 cut(s) 219, 557, 1524
MspA1I CMGCKG 3 cut(s) 361, 955, 1257
MspI CCGG 4 cut(s) 379, 708, 1462, 1585
MspR9I CCNGG 7 cut(s) 254, 615, 708, 1023, 1086, 1169, 1182
Mva1269I GAATGC 2 cut(s) 655, 874
MvaI CCWGG 6 cut(s) 254, 615, 1023, 1086, 1169, 1182
MvnI CGCG 2 cut(s) 329, 1451
MwoI GCNNNNNNNGC 8 cut(s) 544, 746, 832, 955, 964, 1138, 1285, 1540
NaeI GCCGGC 1 cut(s) 380
NciI CCSGG 1 cut(s) 708
NcoI CCATGG 2 cut(s) 427, 1365
NdeII GATC 5 cut(s) 30, 703, 988, 1144, 1238
NgoMIV GCCGGC 1 cut(s) 378
NlaIV GGNNCC 5 cut(s) 50, 174, 669, 756, 1126
NmeAIII GCCGAG 1 cut(s) 201
NmuCI GTSAC 1 cut(s) 765
NruI TCGCGA 1 cut(s) 1451
NspI RCATGY 2 cut(s) 493, 1190
NspV TTCGAA 1 cut(s) 1325
PaeI GCATGC 1 cut(s) 493
PaeR7I CTCGAG 1 cut(s) 191
PasI CCCWGGG 1 cut(s) 1181
PcsI WCGNNNNNNNCGW 5 cut(s) 99, 108, 117, 123, 173
PctI GAATGC 2 cut(s) 655, 874
PdiI GCCGGC 1 cut(s) 380
PfeI GAWTC 5 cut(s) 266, 410, 803, 1388, 1458
PflFI GACNNNGTC 1 cut(s) 1472
PfoI TCCNGGA 3 cut(s) 613, 706, 1021
PkrI GCNGC 8 cut(s) 456, 570, 837, 951, 954, 957, 1319, 1372
PleI GAGTC 3 cut(s) 116, 361, 783
PpsI GAGTC 3 cut(s) 116, 361, 783
PpuMI RGGWCCY 1 cut(s) 754
Psp5II RGGWCCY 1 cut(s) 754
Psp6I CCWGG 6 cut(s) 252, 613, 1021, 1084, 1167, 1180
PspFI CCCAGC 2 cut(s) 357, 382
PspGI CCWGG 6 cut(s) 252, 613, 1021, 1084, 1167, 1180
PspN4I GGNNCC 5 cut(s) 50, 174, 669, 756, 1126
PspPI GGNCC 4 cut(s) 48, 667, 754, 1474
PspPPI RGGWCCY 1 cut(s) 754
PsuI RGATCY 1 cut(s) 1238
PsyI GACNNNGTC 1 cut(s) 1472
PvuII CAGCTG 2 cut(s) 361, 955
RruI TCGCGA 1 cut(s) 1451
RsaI GTAC 5 cut(s) 80, 597, 621, 854, 870
RsaNI GTAC 5 cut(s) 79, 596, 620, 853, 869
SaqAI TTAA 3 cut(s) 219, 557, 1524
SatI GCNGC 8 cut(s) 455, 569, 836, 950, 953, 956, 1318, 1371
Sau3AI GATC 5 cut(s) 30, 703, 988, 1144, 1238
Sau96I GGNCC 4 cut(s) 48, 667, 754, 1474
SchI GAGTC 3 cut(s) 116, 361, 784
ScrFI CCNGG 7 cut(s) 254, 615, 708, 1023, 1086, 1169, 1182
SduI GDGCHC 1 cut(s) 349
SfaNI GCATC 1 cut(s) 1207
SfcI CTRYAG 2 cut(s) 744, 856
Sfr274I CTCGAG 1 cut(s) 191
SfuI TTCGAA 1 cut(s) 1325
SinI GGWCC 3 cut(s) 48, 754, 1474
SlaI CTCGAG 1 cut(s) 191
SmlI CTYRAG 2 cut(s) 191, 864
SmoI CTYRAG 2 cut(s) 191, 864
SphI GCATGC 1 cut(s) 493
Sse9I AATT 6 cut(s) 89, 351, 388, 496, 727, 1204
SspMI CTAG 2 cut(s) 458, 1374
StyD4I CCNGG 7 cut(s) 252, 613, 706, 1021, 1084, 1167, 1180
StyI CCWWGG 3 cut(s) 427, 1341, 1365
TaaI ACNGT 3 cut(s) 485, 1304, 1486
TaiI ACGT 4 cut(s) 160, 1213, 1236, 1524
TaqI TCGA 4 cut(s) 93, 192, 370, 1325
TaqII GACCGA 1 cut(s) 36
TasI AATT 6 cut(s) 89, 351, 388, 496, 727, 1204
TatI WGTACW 4 cut(s) 595, 619, 852, 868
TauI GCSGC 1 cut(s) 952
TfiI GAWTC 5 cut(s) 266, 410, 803, 1388, 1458
Tru1I TTAA 3 cut(s) 219, 557, 1524
Tru9I TTAA 3 cut(s) 219, 557, 1524
TscAI CASTG 6 cut(s) 279, 349, 490, 898, 1405, 1491
TseFI GTSAC 1 cut(s) 765
TseI GCWGC 7 cut(s) 454, 568, 835, 952, 955, 1317, 1370
Tsp45I GTSAC 1 cut(s) 765
TspDTI ATGAA 8 cut(s) 7, 17, 314, 597, 1004, 1233, 1283, 1562
TspGWI ACGGA 2 cut(s) 26, 115
TspRI CASTG 6 cut(s) 279, 349, 490, 898, 1405, 1491
Tth111I GACNNNGTC 1 cut(s) 1472
VneI GTGCAC 1 cut(s) 345
VpaK11BI GGWCC 3 cut(s) 48, 754, 1474
XapI RAATTY 5 cut(s) 351, 388, 496, 727, 1204
XceI RCATGY 2 cut(s) 493, 1190
XhoI CTCGAG 1 cut(s) 191
XspI CTAG 2 cut(s) 458, 1374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.