RchiOBHm_Chr7g0192951

UBA-like domain (DUF1421)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0013667
Physical Location & Seq
Reverse (-)
11376909 .. 11379892
2984 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17251

Sequence Viewer

Length: 1590 bp
ATGAGAACAACGTCGGAGTTCATGGACAAGCAGATTATGGAACTTTCTAGATCCTACTCCGACGACTTCTCTCAGCTCACATACCCTCCTCATCCTCATCCTCATCAGCTAGAAAACGACGACGACGACGACGAGCTCTCCAGCTTTCATTTCCGCCCCGTAGGGCAGCAGTCACGCGCCTCCACGCTCGAGATTCGTGGTTCTATGGATCAAACTGAACGTGCGAAATCCAGGGACTTGGCGATGATTTCGGTGATTGATGGGAAGATGAACCAGCATTTTGGCAATTTGATGCATGCGGTGGAGGGTCTCAGCGCACGAGTCTCTCAGCTGGAGACTCGGTTGCGCCTGGTAGAGAATTCTGTTGACGACTTGAAGGATTGTTCTGATGTTAACTATGGCAAGACTGATGGGAAGCTGAGGGAAGTAGAACACATTTTGAGAAAGGTTGAAGGTGGTATGCAGGATTTGAGAGATAAGCAAGAGATCTCAGAGGCTCAGCTGCAGCTTGCAAAACTTCAAATGCTTAAGGATCACCAGAAGTTGGAACAAGAAAGGAGCAATGTGCAAACAACTTCCGCGTCATCTGCTCCTCAGAAATCCCACCAATCATATTCAACTCCTGTTGTTCCTCATCAATCCCACCAATCATATTCAACTCCTGTTGCTTCTGTACAACATCCTTCCCTTCCTCCTGATATTGCCCCAACCCTGACCCATCAGAACTTTCCACCAGCACCTACAGCAGCTCAGCTTCCAGCTCAGTCATCTCAGTATCAAACTCCTTATAGTCAACAGCCAGATTCTAACTACTCGGCACCTGTGCTGAATCCACCCACAACTCAGGCATACTATATGTCTCAAGTTCAGCAGTCGCAACCACCTCCCACAGCACCATATCAACCCTATCCAGCAGTACCACATCCTTCACAAACATCACATTTTCAGAAGCAGAGTCAACTTCACCCGCCTCTCAATGCTCCTGATCCACAAGCCCAGTATTCATCGATTCACAATCCAGCAGAAACCCCGTATGGGTTATCTCAAAGCTATCCCCAGAGCATCCACAAAACCTCTAGTGTGCCTGGCATGGTTCTACCATCACAACAACAGTTTGAGGGTTCCATGCAGTATACACATGACCCATCTACTAGAAATTACAGCACAGACTTCTCCCCTGGAAATATGCAACCAGTTCAACGTTCAAGCTACGATGACTTTTATTCCCACGGCGGATCTCCTTCTCACTACAGTGATTCAAAAATGAAACAGTCGCAAGTATCACCATCCTCTTCGGTCGCTTCTGGTGGAAGCAGTTTCTCAAGACTGCCAACTGCAAAGGTATTGCCGTATGCATTACCCATGGCTGCCAGTGTGGATAAGGAGTCAGATTCTGGCGGGACTGGAAACCGTGTTCCAGTTGATAATGTCATTGATAAGGTTGTAGCTATGGGATTCCGAAGGGACATAGTCAGAGCAACAGTGAGGAAAATGACTGAGAATGGGCAGGCAGTGGACCTTAATGTTGTGCTGGATAAACTGATGAACAGTGGAGAAGTTCAGTCCCAAAGTGGTGGATTTGGCCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1421

Protein Analysis

529

Amino Acids

58.45

Weight (kDa)

5.94

Isoelectric Point (pI)

65.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1421 PF07223 474 - 517 4.4e-20 UBA-like domain (DUF1421)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013667)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g05870 FvH4_5g05870
malus_domestica MD06G1169700.v1.1 MD14G1175200.v1.1
prunus_persica Prupe.5G168500_v2.0.a1
pyrus_communis pycom06g15100 pycom14g14620
rosa_chinensis RchiOBHm_Chr7g0192951
rosa_laevigata RLG00000004309
rosa_multiflora Rmu_sc0002040.1_g000061
rosa_roxburghii Rroxscaffold_3G00262510
rosa_rugosa Rorug07G0006400 Rorug07G0294800
rosa_samantha Rh7AG131600 Rh7BG132500 Rh7CG135700 Rh7DG133600
rosa_wichuraiana Rw7G011230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 817
AccB7I CCANNNNNTGG 1 cut(s) 544
AccI GTMKAC 1 cut(s) 1133
AccII CGCG 2 cut(s) 177, 581
AciI CCGC 6 cut(s) 154, 299, 579, 968, 1233, 1398
AclI AACGTT 1 cut(s) 1201
AclWI GGATC 5 cut(s) 45, 216, 540, 980, 1243
AcoI YGGCCR 1 cut(s) 1582
AcsI RAATTY 1 cut(s) 358
AfaI GTAC 2 cut(s) 675, 918
AfiI CCNNNNNNNGG 2 cut(s) 544, 1035
AflII CTTAAG 1 cut(s) 527
AgsI TTSAA 8 cut(s) 376, 452, 521, 618, 657, 1199, 1206, 1260
AjnI CCWGG 4 cut(s) 230, 348, 1084, 1177
AleI CACNNNNGTG 1 cut(s) 1251
AloI GAACNNNNNNTCC 2 cut(s) 1398, 1430
Alw21I GWGCWC 1 cut(s) 138
Alw26I GTCTC 4 cut(s) 314, 328, 329, 864
AlwI GGATC 5 cut(s) 45, 216, 540, 980, 1243
AlwNI CAGNNNCTG 1 cut(s) 1394
Ama87I CYCGRG 1 cut(s) 188
AoxI GGCC 1 cut(s) 1582
ApeKI GCWGC 5 cut(s) 166, 502, 505, 746, 1367
ApoI RAATTY 1 cut(s) 358
AspLEI GCGC 3 cut(s) 179, 317, 348
AspS9I GGNCC 1 cut(s) 1516
AsuHPI GGTGA 4 cut(s) 265, 527, 956, 1275
AvaI CYCGRG 1 cut(s) 188
AvaII GGWCC 1 cut(s) 1516
BalI TGGCCA 1 cut(s) 1584
BanI GGYRCC 1 cut(s) 817
BanII GRGCYC 1 cut(s) 138
BauI CACGAG 1 cut(s) 318
Bbv12I GWGCWC 1 cut(s) 138
BbvCI CCTCAGC 1 cut(s) 419
BbvI GCAGC 5 cut(s) 178, 489, 517, 758, 1354
BccI CCATC 6 cut(s) 254, 404, 726, 1108, 1153, 1294
BceAI ACGGC 2 cut(s) 1246, 1333
BciT130I CCWGG 4 cut(s) 232, 350, 1086, 1179
BcoDI GTCTC 4 cut(s) 314, 328, 329, 864
BfaI CTAG 4 cut(s) 48, 110, 1077, 1152
BfmI CTRYAG 3 cut(s) 503, 741, 1249
BfrI CTTAAG 1 cut(s) 527
BglII AGATCT 1 cut(s) 486
BisI GCNGC 5 cut(s) 167, 503, 506, 747, 1368
BlpI GCTNAGC 2 cut(s) 498, 750
BlsI GCNGC 5 cut(s) 168, 504, 507, 748, 1369
Bme1390I CCNGG 4 cut(s) 232, 350, 1086, 1179
Bme18I GGWCC 1 cut(s) 1516
BmeT110I CYCGRG 1 cut(s) 188
BmgT120I GGNCC 1 cut(s) 1516
BmiI GGNNCC 2 cut(s) 819, 1123
BmrFI CCNGG 4 cut(s) 232, 350, 1086, 1179
BmrI ACTGGG 1 cut(s) 991
BmsI GCATC 2 cut(s) 282, 1071
BmuI ACTGGG 1 cut(s) 991
BpmI CTGGAG 2 cut(s) 124, 353
Bpu10I CCTNAGC 1 cut(s) 419
Bpu1102I GCTNAGC 2 cut(s) 498, 750
BpuEI CTTGAG 2 cut(s) 846, 1306
Bsa29I ATCGAT 1 cut(s) 1007
BsaI GGTCTC 1 cut(s) 314
BsaJI CCNNGG 4 cut(s) 231, 1177, 1228, 1362
BsaXI ACNNNNNCTCC 6 cut(s) 70, 100, 122, 152, 326, 356
Bsc4I CCNNNNNNNGG 2 cut(s) 544, 1035
Bse1I ACTGG 6 cut(s) 997, 1193, 1371, 1408, 1418, 1585
Bse3DI GCAATG 1 cut(s) 568
BseBI CCWGG 4 cut(s) 232, 350, 1086, 1179
BseCI ATCGAT 1 cut(s) 1007
BseDI CCNNGG 4 cut(s) 231, 1177, 1228, 1362
BseGI GGATG 6 cut(s) 91, 97, 679, 922, 1062, 1286
BseLI CCNNNNNNNGG 2 cut(s) 544, 1035
BseMI GCAATG 1 cut(s) 568
BseNI ACTGG 6 cut(s) 997, 1193, 1371, 1408, 1418, 1585
BseRI GAGGAG 2 cut(s) 78, 582
BseXI GCAGC 5 cut(s) 178, 489, 517, 758, 1354
Bsh1236I CGCG 2 cut(s) 177, 581
Bsh1285I CGRYCG 1 cut(s) 1299
BshFI GGCC 1 cut(s) 1584
BshNI GGYRCC 1 cut(s) 817
BshVI ATCGAT 1 cut(s) 1007
BsiEI CGRYCG 1 cut(s) 1299
BsiHKAI GWGCWC 1 cut(s) 138
BsiHKCI CYCGRG 1 cut(s) 188
BslFI GGGAC 4 cut(s) 248, 1414, 1478, 1549
BslI CCNNNNNNNGG 2 cut(s) 544, 1035
BsmAI GTCTC 4 cut(s) 314, 328, 329, 864
BsmFI GGGAC 4 cut(s) 248, 1414, 1478, 1549
BsnI GGCC 1 cut(s) 1584
Bso31I GGTCTC 1 cut(s) 314
BsoBI CYCGRG 1 cut(s) 188
Bsp1286I GDGCHC 1 cut(s) 138
Bsp1407I TGTACA 1 cut(s) 673
Bsp143I GATC 6 cut(s) 50, 208, 486, 532, 985, 1235
Bsp1720I GCTNAGC 2 cut(s) 498, 750
Bsp19I CCATGG 1 cut(s) 1362
BspACI CCGC 6 cut(s) 154, 299, 579, 968, 1233, 1398
BspANI GGCC 1 cut(s) 1584
BspDI ATCGAT 1 cut(s) 1007
BspFNI CGCG 2 cut(s) 177, 581
BspLI GGNNCC 2 cut(s) 819, 1123
BspMAI CTGCAG 1 cut(s) 507
BspPI GGATC 5 cut(s) 45, 216, 540, 980, 1243
BspT107I GGYRCC 1 cut(s) 817
BspTI CTTAAG 1 cut(s) 527
BspTNI GGTCTC 1 cut(s) 314
BsrDI GCAATG 1 cut(s) 568
BsrGI TGTACA 1 cut(s) 673
BsrI ACTGG 6 cut(s) 997, 1193, 1371, 1408, 1418, 1585
BssECI CCNNGG 4 cut(s) 231, 1177, 1228, 1362
BssMI GATC 6 cut(s) 50, 208, 486, 532, 985, 1235
BssNAI GTATAC 1 cut(s) 1134
BssSI CACGAG 1 cut(s) 318
BssT1I CCWWGG 1 cut(s) 1362
Bst1107I GTATAC 1 cut(s) 1134
Bst2BI CACGAG 1 cut(s) 318
Bst2UI CCWGG 4 cut(s) 232, 350, 1086, 1179
Bst4CI ACNGT 6 cut(s) 1113, 1253, 1272, 1412, 1483, 1550
Bst6I CTCTTC 1 cut(s) 1297
BstAFI CTTAAG 1 cut(s) 527
BstAUI TGTACA 1 cut(s) 673
BstC8I GCNNGC 3 cut(s) 297, 510, 1509
BstDSI CCRYGG 2 cut(s) 1228, 1362
BstF5I GGATG 6 cut(s) 91, 97, 679, 922, 1062, 1286
BstFNI CGCG 2 cut(s) 177, 581
BstHHI GCGC 3 cut(s) 179, 317, 348
BstKTI GATC 6 cut(s) 53, 211, 489, 535, 988, 1238
BstMAI GTCTC 4 cut(s) 314, 328, 329, 864
BstMBI GATC 6 cut(s) 50, 208, 486, 532, 985, 1235
BstMCI CGRYCG 1 cut(s) 1299
BstMWI GCNNNNNNNGC 2 cut(s) 587, 743
BstNI CCWGG 4 cut(s) 232, 350, 1086, 1179
BstNSI RCATGY 1 cut(s) 299
BstSCI CCNGG 4 cut(s) 230, 348, 1084, 1177
BstSFI CTRYAG 3 cut(s) 503, 741, 1249
BstUI CGCG 2 cut(s) 177, 581
BstV1I GCAGC 5 cut(s) 178, 489, 517, 758, 1354
BstX2I RGATCY 3 cut(s) 50, 486, 1235
BstXI CCANNNNNNTGG 3 cut(s) 238, 281, 1574
BstYI RGATCY 3 cut(s) 50, 486, 1235
BstZ17I GTATAC 1 cut(s) 1134
Bsu15I ATCGAT 1 cut(s) 1007
BsuRI GGCC 1 cut(s) 1584
BsuTUI ATCGAT 1 cut(s) 1007
BtgI CCRYGG 2 cut(s) 1228, 1362
BtgZI GCGATG 1 cut(s) 257
BtsCI GGATG 6 cut(s) 91, 97, 679, 922, 1062, 1286
BtsI GCAGTG 1 cut(s) 1518
BtsIMutI CAGTG 5 cut(s) 1258, 1378, 1488, 1518, 1555
Cac8I GCNNGC 3 cut(s) 297, 510, 1509
CaiI CAGNNNCTG 1 cut(s) 1394
CfoI GCGC 3 cut(s) 179, 317, 348
Cfr13I GGNCC 1 cut(s) 1516
ClaI ATCGAT 1 cut(s) 1007
CseI GACGC 1 cut(s) 570
Csp6I GTAC 2 cut(s) 674, 917
CviAII CATG 6 cut(s) 22, 296, 1090, 1126, 1139, 1363
CviQI GTAC 2 cut(s) 674, 917
DpnI GATC 6 cut(s) 52, 210, 488, 534, 987, 1237
DpnII GATC 6 cut(s) 50, 208, 486, 532, 985, 1235
EaeI YGGCCR 1 cut(s) 1582
Eam1104I CTCTTC 1 cut(s) 1297
EarI CTCTTC 1 cut(s) 1297
EciI GGCGGA 2 cut(s) 143, 1248
Ecl136II GAGCTC 1 cut(s) 136
Eco130I CCWWGG 1 cut(s) 1362
Eco24I GRGCYC 1 cut(s) 138
Eco31I GGTCTC 1 cut(s) 314
Eco47I GGWCC 1 cut(s) 1516
Eco53kI GAGCTC 1 cut(s) 136
Eco88I CYCGRG 1 cut(s) 188
EcoICRI GAGCTC 1 cut(s) 136
EcoRI GAATTC 1 cut(s) 358
EcoRII CCWGG 4 cut(s) 230, 348, 1084, 1177
EcoT14I CCWWGG 1 cut(s) 1362
EcoT22I ATGCAT 2 cut(s) 297, 1357
EcoT38I GRGCYC 1 cut(s) 138
ErhI CCWWGG 1 cut(s) 1362
FaeI CATG 6 cut(s) 25, 299, 1093, 1129, 1142, 1366
FaqI GGGAC 4 cut(s) 248, 1414, 1478, 1549
FatI CATG 6 cut(s) 21, 295, 1089, 1125, 1138, 1362
FauI CCCGC 2 cut(s) 975, 1391
FblI GTMKAC 1 cut(s) 1133
Fnu4HI GCNGC 5 cut(s) 167, 503, 506, 747, 1368
FokI GGATG 6 cut(s) 78, 84, 666, 909, 1049, 1273
FriOI GRGCYC 1 cut(s) 138
Fsp4HI GCNGC 5 cut(s) 167, 503, 506, 747, 1368
FspBI CTAG 4 cut(s) 48, 110, 1077, 1152
GlaI GCGC 3 cut(s) 178, 316, 347
GluI GCNGC 5 cut(s) 167, 503, 506, 747, 1368
GsuI CTGGAG 2 cut(s) 124, 353
HaeIII GGCC 1 cut(s) 1584
HgaI GACGC 1 cut(s) 570
HhaI GCGC 3 cut(s) 179, 317, 348
Hin1II CATG 6 cut(s) 25, 299, 1093, 1129, 1142, 1366
Hin6I GCGC 3 cut(s) 177, 315, 346
HinP1I GCGC 3 cut(s) 177, 315, 346
HincII GTYRAC 4 cut(s) 367, 394, 794, 959
HindII GTYRAC 4 cut(s) 367, 394, 794, 959
HpaI GTTAAC 1 cut(s) 394
HphI GGTGA 4 cut(s) 265, 527, 956, 1275
Hpy166II GTNNAC 6 cut(s) 367, 394, 794, 959, 1134, 1516
Hpy188III TCNNGA 5 cut(s) 48, 190, 695, 983, 1323
Hpy8I GTNNAC 6 cut(s) 367, 394, 794, 959, 1134, 1516
Hpy99I CGWCG 7 cut(s) 16, 65, 122, 125, 128, 131, 134
HpyAV CCTTC 7 cut(s) 370, 446, 693, 698, 936, 1251, 1455
HpyCH4III ACNGT 6 cut(s) 1113, 1253, 1272, 1412, 1483, 1550
HpyCH4IV ACGT 3 cut(s) 11, 220, 1201
HpyCH4V TGCA 9 cut(s) 295, 463, 505, 512, 568, 1129, 1189, 1337, 1355
HpyF10VI GCNNNNNNNGC 2 cut(s) 587, 743
HpySE526I ACGT 3 cut(s) 11, 220, 1201
Hsp92II CATG 6 cut(s) 25, 299, 1093, 1129, 1142, 1366
HspAI GCGC 3 cut(s) 177, 315, 346
KspAI GTTAAC 1 cut(s) 394
Kzo9I GATC 6 cut(s) 50, 208, 486, 532, 985, 1235
LmnI GCTCC 3 cut(s) 558, 595, 985
Lsp1109I GCAGC 5 cut(s) 178, 489, 517, 758, 1354
LweI GCATC 2 cut(s) 282, 1071
MaeI CTAG 4 cut(s) 48, 110, 1077, 1152
MaeII ACGT 3 cut(s) 11, 220, 1201
MaeIII GTNAC 1 cut(s) 171
MalI GATC 6 cut(s) 52, 210, 488, 534, 987, 1237
MboI GATC 6 cut(s) 50, 208, 486, 532, 985, 1235
MboII GAAGA 2 cut(s) 277, 1284
MflI RGATCY 3 cut(s) 50, 486, 1235
MhlI GDGCHC 1 cut(s) 138
MlsI TGGCCA 1 cut(s) 1584
MluCI AATT 3 cut(s) 286, 358, 1156
MluNI TGGCCA 1 cut(s) 1584
MlyI GAGTC 4 cut(s) 330, 331, 964, 1394
MmeI TCCRAC 2 cut(s) 84, 525
Mox20I TGGCCA 1 cut(s) 1584
Mph1103I ATGCAT 2 cut(s) 297, 1357
MscI TGGCCA 1 cut(s) 1584
MseI TTAA 3 cut(s) 393, 528, 1521
MslI CAYNNNNRTG 1 cut(s) 1251
Msp20I TGGCCA 1 cut(s) 1584
MspA1I CMGCKG 2 cut(s) 331, 502
MspCI CTTAAG 1 cut(s) 527
MspR9I CCNGG 4 cut(s) 232, 350, 1086, 1179
MvaI CCWGG 4 cut(s) 232, 350, 1086, 1179
MvnI CGCG 2 cut(s) 177, 581
MwoI GCNNNNNNNGC 2 cut(s) 587, 743
NcoI CCATGG 1 cut(s) 1362
NdeII GATC 6 cut(s) 50, 208, 486, 532, 985, 1235
NlaIII CATG 6 cut(s) 25, 299, 1093, 1129, 1142, 1366
NlaIV GGNNCC 2 cut(s) 819, 1123
NmeAIII GCCGAG 1 cut(s) 794
NmuCI GTSAC 1 cut(s) 171
NsiI ATGCAT 2 cut(s) 297, 1357
NspI RCATGY 1 cut(s) 299
OliI CACNNNNGTG 1 cut(s) 1251
PaeI GCATGC 1 cut(s) 299
PaeR7I CTCGAG 1 cut(s) 188
PcsI WCGNNNNNNNCGW 3 cut(s) 123, 126, 129
PfeI GAWTC 7 cut(s) 193, 803, 829, 1009, 1256, 1391, 1455
PflFI GACNNNGTC 1 cut(s) 1469
PflMI CCANNNNNTGG 1 cut(s) 544
PkrI GCNGC 5 cut(s) 168, 504, 507, 748, 1369
PleI GAGTC 4 cut(s) 329, 331, 963, 1393
PpsI GAGTC 4 cut(s) 329, 331, 963, 1393
Psp124BI GAGCTC 1 cut(s) 138
Psp1406I AACGTT 1 cut(s) 1201
Psp6I CCWGG 4 cut(s) 230, 348, 1084, 1177
PspGI CCWGG 4 cut(s) 230, 348, 1084, 1177
PspN4I GGNNCC 2 cut(s) 819, 1123
PspPI GGNCC 1 cut(s) 1516
PstI CTGCAG 1 cut(s) 507
PstNI CAGNNNCTG 1 cut(s) 1394
PsuI RGATCY 3 cut(s) 50, 486, 1235
PsyI GACNNNGTC 1 cut(s) 1469
PvuII CAGCTG 2 cut(s) 331, 502
RsaI GTAC 2 cut(s) 675, 918
RsaNI GTAC 2 cut(s) 674, 917
RseI CAYNNNNRTG 1 cut(s) 1251
SacI GAGCTC 1 cut(s) 138
SaqAI TTAA 3 cut(s) 393, 528, 1521
SatI GCNGC 5 cut(s) 167, 503, 506, 747, 1368
Sau3AI GATC 6 cut(s) 50, 208, 486, 532, 985, 1235
Sau96I GGNCC 1 cut(s) 1516
SchI GAGTC 4 cut(s) 330, 331, 964, 1394
ScrFI CCNGG 4 cut(s) 232, 350, 1086, 1179
SduI GDGCHC 1 cut(s) 138
SfaNI GCATC 2 cut(s) 282, 1071
SfcI CTRYAG 3 cut(s) 503, 741, 1249
Sfr274I CTCGAG 1 cut(s) 188
SinI GGWCC 1 cut(s) 1516
SlaI CTCGAG 1 cut(s) 188
SmiMI CAYNNNNRTG 1 cut(s) 1251
SmlI CTYRAG 4 cut(s) 188, 527, 861, 1321
SmoI CTYRAG 4 cut(s) 188, 527, 861, 1321
SphI GCATGC 1 cut(s) 299
Sse9I AATT 3 cut(s) 286, 358, 1156
SsiI CCGC 6 cut(s) 154, 299, 579, 968, 1233, 1398
SspMI CTAG 4 cut(s) 48, 110, 1077, 1152
SstI GAGCTC 1 cut(s) 138
StyD4I CCNGG 4 cut(s) 230, 348, 1084, 1177
StyI CCWWGG 1 cut(s) 1362
TaaI ACNGT 6 cut(s) 1113, 1253, 1272, 1412, 1483, 1550
TaiI ACGT 3 cut(s) 14, 223, 1204
TaqI TCGA 2 cut(s) 189, 1007
TaqII GACCGA 1 cut(s) 1285
TasI AATT 3 cut(s) 286, 358, 1156
TatI WGTACW 1 cut(s) 673
TfiI GAWTC 7 cut(s) 193, 803, 829, 1009, 1256, 1391, 1455
Tru1I TTAA 3 cut(s) 393, 528, 1521
Tru9I TTAA 3 cut(s) 393, 528, 1521
TscAI CASTG 5 cut(s) 1258, 1378, 1488, 1518, 1555
TseFI GTSAC 1 cut(s) 171
TseI GCWGC 5 cut(s) 166, 502, 505, 746, 1367
Tsp45I GTSAC 1 cut(s) 171
TspDTI ATGAA 6 cut(s) 10, 137, 284, 993, 1280, 1559
TspRI CASTG 5 cut(s) 1258, 1378, 1488, 1518, 1555
Tth111I GACNNNGTC 1 cut(s) 1469
Van91I CCANNNNNTGG 1 cut(s) 544
Vha464I CTTAAG 1 cut(s) 527
VpaK11BI GGWCC 1 cut(s) 1516
XapI RAATTY 1 cut(s) 358
XbaI TCTAGA 1 cut(s) 47
XceI RCATGY 1 cut(s) 299
XhoI CTCGAG 1 cut(s) 188
XmiI GTMKAC 1 cut(s) 1133
XspI CTAG 4 cut(s) 48, 110, 1077, 1152
Zsp2I ATGCAT 2 cut(s) 297, 1357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.