RLG00000004309

UBA-like domain (DUF1421)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0013667
Physical Location & Seq
Forward (+)
58175264 .. 58178090
2827 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004309

Sequence Viewer

Length: 1890 bp
ATGAAAAATGTAAATGATTTTGTTATTGGGCTCAGCTCACAAAGATTGAGCGGGAGTCCAACCCAAGAGGGGCAGGATAGCAGCAAATCTATGAGGCTAAGGCTTCGACTTGTAAGTCAATTAACGTTGACACCTCGATCTCATTGTTTGCACTCGAAACACAATTCTGAGCTTGGAATCTCAGAAAAGCATGACGCCAAATTACGCAATAAGCCCAACAATCCTACGCCGATCACGATGAGAACAACGTCGGAGTTCATGGACAAGCAGATTATGGAACTTTCTAGATCCTACTCCGACGACTTCTCTCAGCTCACATACCCTCCTCATCCTCATCCTCATCCTCATCAGCTAGAAAACGACGACGACGACGACGACTTGCTCTCCAGCTTTCATTTTCGCCCCGTACGGCACGGCGTCCCGCAGCAGTCACGCGCCTCCACGCTCGAGAATCGCGGTTCTATGGATCAAACTGAACGTGCGAAATCCAGGGACTTGGCGATGATTTCGGTGATTGATGGGAAGTTGAACCAGCATTTTGGCAATTTGATGCATGCAGTGGAGGGTCTCAGCGCACGAGTCTCTCAACTGGAGACTCGGTTGCGCCTGGTTGAGAATTCTGTTGACGACTTGAAGGATTGTTCTGATGTTAACTATGGCAAGACTGATGGGAAGCTGAGGGAAGTAGAACACATTTTAAGAAAGGTTGAAGGTGGTATGCAGGATTTGAGAGATAAGCAAGAAATCTCAGAGGCTCAGCTGCAGCTTGCAAAACTTCAAATGCTTAAGGATCACCAGAAGTTGGAACAAGAAAGGAGCAATGTGCAAACAACTTCCATGTCATCTGCTCCTCAGCAATCCCACCAATCATATTCAACTCCTGTTGCTCCTCATCAATCCCACCAATCATATTCAACTCCTGTTGCTCCTCATCAATCCCACCAATCATATTCAACTCCTGTTGCTTCTGTACAACATCCTTCCCTTCCTCCTGATATTCCCCCAACCCTGACCCATCAGAACTTTCCACCAGCACCTACAGCAGCTCAGCTTCCAGCTCAGTCATCTCAGTATCAAACTCCTTATAGTCAACAGCCAGATTCTAACTACTCGGCACCTGTGTCGAATCCACCACCCACACCTCAGGCATACTATCTGTCTCAAGTTCAGCAGTCACAGCCACCTCCCACAGCTCCATATCAACCCTATCCAGCGGTACCACATCCTTCACAAACATCACATTTTCAGCAGCAGAGTCAACTTCACCTGCCTCTCAATGCTCCTGATCCACAAGCCCAGTATTCATCAATTCACAATCCAGCAGAAACCCCGTATGGGTTATCTCAAAGCTATCCCCAGAGCATCCACAAAACCTCTAATGCGCCTGGCATGGTTCTACCATCACAACAACAGTTTGAGGGTTCCATGCAGTATACACATGACCGATCTACTAGAAATTACAGCACAGACTTCTCCCCTGGAAATATGCAACCAGGTCAACGTTCAAGCAACGATGACTTTTATTCCCACGGTGGATCTCCTTCTCACTACAGTGATTCAAAAATGAAACAGTCGCAAGTATCGCCATCCTATTCGGTCGCTTCTGGTGGAAGCAGTTTCTCAAGACTGCCAACTGCAAAGGTATTGCCGTATGCATTACCCATGGCTGCCAGTGTGGATAAGGAGTCAGATTCTGGCGGGACTGGAAACCGTGTTCCAGTTGATAATGTCATTGATAAGGTTGTAGCTATGGGATTCCGAAGGGACATAGTCAGAGCAACAGTGAGGAAAATGACTGAGAATGGGCAGGCAGTGGACCTTAATGTTGTGCTGGATAAACTGATGAACAGTGGAGAAGTTCAGTCCCAAAGTGGTGGATTTGGCCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1421

Protein Analysis

630

Amino Acids

69.65

Weight (kDa)

6.56

Isoelectric Point (pI)

64.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1421 PF07223 574 - 617 5.4e-20 UBA-like domain (DUF1421)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013667)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g05870 FvH4_5g05870
malus_domestica MD06G1169700.v1.1 MD14G1175200.v1.1
prunus_persica Prupe.5G168500_v2.0.a1
pyrus_communis pycom06g15100 pycom14g14620
rosa_chinensis RchiOBHm_Chr7g0192951
rosa_laevigata RLG00000004309
rosa_multiflora Rmu_sc0002040.1_g000061
rosa_roxburghii Rroxscaffold_3G00262510
rosa_rugosa Rorug07G0006400 Rorug07G0294800
rosa_samantha Rh7AG131600 Rh7BG132500 Rh7CG135700 Rh7DG133600
rosa_wichuraiana Rw7G011230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1275
AasI GACNNNNNNGTC 1 cut(s) 114
Acc36I ACCTGC 1 cut(s) 1275
Acc65I GGTACC 1 cut(s) 1216
AccB1I GGYRCC 2 cut(s) 1114, 1216
AccB7I CCANNNNNTGG 1 cut(s) 802
AccBSI CCGCTC 1 cut(s) 51
AccI GTMKAC 1 cut(s) 1433
AccII CGCG 2 cut(s) 435, 456
AciI CCGC 5 cut(s) 51, 422, 456, 1214, 1698
AclI AACGTT 2 cut(s) 125, 1501
AclWI GGATC 5 cut(s) 282, 474, 798, 1280, 1543
AcoI YGGCCR 1 cut(s) 1882
AcsI RAATTY 1 cut(s) 616
AcyI GRCGYC 2 cut(s) 195, 417
AfaI GTAC 3 cut(s) 408, 972, 1218
AfiI CCNNNNNNNGG 3 cut(s) 69, 802, 1335
AflII CTTAAG 1 cut(s) 785
AgsI TTSAA 9 cut(s) 529, 634, 710, 779, 876, 915, 954, 1506, 1560
AjnI CCWGG 5 cut(s) 488, 606, 1384, 1477, 1492
AleI CACNNNNGTG 1 cut(s) 1551
AloI GAACNNNNNNTCC 2 cut(s) 1698, 1730
Alw26I GTCTC 4 cut(s) 572, 586, 587, 1164
AlwI GGATC 5 cut(s) 282, 474, 798, 1280, 1543
AlwNI CAGNNNCTG 1 cut(s) 1694
Ama87I CYCGRG 1 cut(s) 446
AoxI GGCC 1 cut(s) 1882
ApeKI GCWGC 7 cut(s) 81, 424, 760, 763, 1043, 1249, 1667
ApoI RAATTY 1 cut(s) 616
Asp718I GGTACC 1 cut(s) 1216
AspLEI GCGC 4 cut(s) 437, 575, 606, 1384
AspS9I GGNCC 1 cut(s) 1816
AsuHPI GGTGA 3 cut(s) 523, 785, 1256
AvaI CYCGRG 1 cut(s) 446
AvaII GGWCC 1 cut(s) 1816
AxyI CCTNAGG 1 cut(s) 1143
BalI TGGCCA 1 cut(s) 1884
BanI GGYRCC 2 cut(s) 1114, 1216
BanII GRGCYC 1 cut(s) 33
BauI CACGAG 1 cut(s) 576
BbvCI CCTCAGC 2 cut(s) 677, 852
BbvI GCAGC 7 cut(s) 93, 436, 747, 775, 1055, 1261, 1654
BccI CCATC 5 cut(s) 512, 662, 1023, 1408, 1594
BceAI ACGGC 3 cut(s) 425, 430, 1633
BcgI CGANNNNNNTGC 2 cut(s) 1104, 1138
BciT130I CCWGG 5 cut(s) 490, 608, 1386, 1479, 1494
BcoDI GTCTC 4 cut(s) 572, 586, 587, 1164
BfaI CTAG 3 cut(s) 285, 353, 1452
BfmI CTRYAG 3 cut(s) 761, 1038, 1549
BfrI CTTAAG 1 cut(s) 785
BfuAI ACCTGC 1 cut(s) 1275
BisI GCNGC 7 cut(s) 82, 425, 761, 764, 1044, 1250, 1668
BlpI GCTNAGC 3 cut(s) 32, 756, 1047
BlsI GCNGC 7 cut(s) 83, 426, 762, 765, 1045, 1251, 1669
Bme1390I CCNGG 5 cut(s) 490, 608, 1386, 1479, 1494
Bme18I GGWCC 1 cut(s) 1816
BmeT110I CYCGRG 1 cut(s) 446
BmgT120I GGNCC 1 cut(s) 1816
BmiI GGNNCC 3 cut(s) 1116, 1218, 1423
BmrFI CCNGG 5 cut(s) 490, 608, 1386, 1479, 1494
BmrI ACTGGG 1 cut(s) 1291
BmsI GCATC 2 cut(s) 540, 1371
BmuI ACTGGG 1 cut(s) 1291
BpmI CTGGAG 2 cut(s) 370, 611
Bpu10I CCTNAGC 3 cut(s) 98, 677, 852
Bpu1102I GCTNAGC 3 cut(s) 32, 756, 1047
BpuEI CTTGAG 2 cut(s) 1146, 1606
BsaHI GRCGYC 2 cut(s) 195, 417
BsaI GGTCTC 1 cut(s) 572
BsaJI CCNNGG 4 cut(s) 489, 1477, 1528, 1662
BsaXI ACNNNNNCTCC 6 cut(s) 307, 337, 368, 398, 584, 614
Bsc4I CCNNNNNNNGG 3 cut(s) 69, 802, 1335
Bse1I ACTGG 6 cut(s) 594, 1297, 1671, 1708, 1718, 1885
Bse21I CCTNAGG 1 cut(s) 1143
Bse3DI GCAATG 1 cut(s) 826
BseBI CCWGG 5 cut(s) 490, 608, 1386, 1479, 1494
BseDI CCNNGG 4 cut(s) 489, 1477, 1528, 1662
BseGI GGATG 7 cut(s) 328, 334, 340, 976, 1222, 1362, 1586
BseLI CCNNNNNNNGG 3 cut(s) 69, 802, 1335
BseMI GCAATG 1 cut(s) 826
BseNI ACTGG 6 cut(s) 594, 1297, 1671, 1708, 1718, 1885
BseRI GAGGAG 4 cut(s) 315, 840, 879, 918
BseXI GCAGC 7 cut(s) 93, 436, 747, 775, 1055, 1261, 1654
Bsh1236I CGCG 2 cut(s) 435, 456
Bsh1285I CGRYCG 1 cut(s) 1599
BshFI GGCC 1 cut(s) 1884
BshNI GGYRCC 2 cut(s) 1114, 1216
BsiEI CGRYCG 1 cut(s) 1599
BsiHKCI CYCGRG 1 cut(s) 446
BsiWI CGTACG 1 cut(s) 406
BslFI GGGAC 5 cut(s) 404, 506, 1714, 1778, 1849
BslI CCNNNNNNNGG 3 cut(s) 69, 802, 1335
BsmAI GTCTC 4 cut(s) 572, 586, 587, 1164
BsmFI GGGAC 5 cut(s) 404, 506, 1714, 1778, 1849
BsnI GGCC 1 cut(s) 1884
Bso31I GGTCTC 1 cut(s) 572
BsoBI CYCGRG 1 cut(s) 446
Bsp1286I GDGCHC 1 cut(s) 33
Bsp1407I TGTACA 1 cut(s) 970
Bsp143I GATC 8 cut(s) 137, 231, 287, 466, 790, 1285, 1445, 1535
Bsp1720I GCTNAGC 3 cut(s) 32, 756, 1047
Bsp19I CCATGG 1 cut(s) 1662
BspACI CCGC 5 cut(s) 51, 422, 456, 1214, 1698
BspANI GGCC 1 cut(s) 1884
BspFNI CGCG 2 cut(s) 435, 456
BspLI GGNNCC 3 cut(s) 1116, 1218, 1423
BspMAI CTGCAG 1 cut(s) 765
BspMI ACCTGC 1 cut(s) 1275
BspPI GGATC 5 cut(s) 282, 474, 798, 1280, 1543
BspT107I GGYRCC 2 cut(s) 1114, 1216
BspTI CTTAAG 1 cut(s) 785
BspTNI GGTCTC 1 cut(s) 572
BsrBI CCGCTC 1 cut(s) 51
BsrDI GCAATG 1 cut(s) 826
BsrGI TGTACA 1 cut(s) 970
BsrI ACTGG 6 cut(s) 594, 1297, 1671, 1708, 1718, 1885
BssECI CCNNGG 4 cut(s) 489, 1477, 1528, 1662
BssMI GATC 8 cut(s) 137, 231, 287, 466, 790, 1285, 1445, 1535
BssNAI GTATAC 1 cut(s) 1434
BssNI GRCGYC 2 cut(s) 195, 417
BssSI CACGAG 1 cut(s) 576
BssT1I CCWWGG 1 cut(s) 1662
Bst1107I GTATAC 1 cut(s) 1434
Bst2BI CACGAG 1 cut(s) 576
Bst2UI CCWGG 5 cut(s) 490, 608, 1386, 1479, 1494
Bst4CI ACNGT 7 cut(s) 1413, 1532, 1553, 1572, 1712, 1783, 1850
BstACI GRCGYC 2 cut(s) 195, 417
BstAFI CTTAAG 1 cut(s) 785
BstAUI TGTACA 1 cut(s) 970
BstC8I GCNNGC 3 cut(s) 555, 768, 1809
BstDSI CCRYGG 2 cut(s) 1528, 1662
BstF5I GGATG 7 cut(s) 328, 334, 340, 976, 1222, 1362, 1586
BstFNI CGCG 2 cut(s) 435, 456
BstHHI GCGC 4 cut(s) 437, 575, 606, 1384
BstKTI GATC 8 cut(s) 140, 234, 290, 469, 793, 1288, 1448, 1538
BstMAI GTCTC 4 cut(s) 572, 586, 587, 1164
BstMBI GATC 8 cut(s) 137, 231, 287, 466, 790, 1285, 1445, 1535
BstMCI CGRYCG 1 cut(s) 1599
BstMWI GCNNNNNNNGC 3 cut(s) 1040, 1177, 1582
BstNI CCWGG 5 cut(s) 490, 608, 1386, 1479, 1494
BstNSI RCATGY 1 cut(s) 557
BstSCI CCNGG 5 cut(s) 488, 606, 1384, 1477, 1492
BstSFI CTRYAG 3 cut(s) 761, 1038, 1549
BstUI CGCG 2 cut(s) 435, 456
BstV1I GCAGC 7 cut(s) 93, 436, 747, 775, 1055, 1261, 1654
BstX2I RGATCY 2 cut(s) 287, 1535
BstXI CCANNNNNNTGG 3 cut(s) 496, 539, 1874
BstYI RGATCY 2 cut(s) 287, 1535
BstZ17I GTATAC 1 cut(s) 1434
Bsu36I CCTNAGG 1 cut(s) 1143
BsuRI GGCC 1 cut(s) 1884
BtgI CCRYGG 2 cut(s) 1528, 1662
BtgZI GCGATG 1 cut(s) 515
BtsCI GGATG 7 cut(s) 328, 334, 340, 976, 1222, 1362, 1586
BtsI GCAGTG 2 cut(s) 564, 1818
BtsIMutI CAGTG 6 cut(s) 564, 1558, 1678, 1788, 1818, 1855
BveI ACCTGC 1 cut(s) 1275
Cac8I GCNNGC 3 cut(s) 555, 768, 1809
CaiI CAGNNNCTG 1 cut(s) 1694
CfoI GCGC 4 cut(s) 437, 575, 606, 1384
Cfr13I GGNCC 1 cut(s) 1816
CseI GACGC 2 cut(s) 203, 406
CsiI ACCWGGT 1 cut(s) 1492
Csp6I GTAC 3 cut(s) 407, 971, 1217
CviAII CATG 8 cut(s) 191, 259, 554, 838, 1390, 1426, 1439, 1663
CviQI GTAC 3 cut(s) 407, 971, 1217
DpnI GATC 8 cut(s) 139, 233, 289, 468, 792, 1287, 1447, 1537
DpnII GATC 8 cut(s) 137, 231, 287, 466, 790, 1285, 1445, 1535
DrdI GACNNNNNNGTC 1 cut(s) 114
DseDI GACNNNNNNGTC 1 cut(s) 114
EaeI YGGCCR 1 cut(s) 1882
Eco130I CCWWGG 1 cut(s) 1662
Eco24I GRGCYC 1 cut(s) 33
Eco31I GGTCTC 1 cut(s) 572
Eco47I GGWCC 1 cut(s) 1816
Eco81I CCTNAGG 1 cut(s) 1143
Eco88I CYCGRG 1 cut(s) 446
EcoRI GAATTC 1 cut(s) 616
EcoRII CCWGG 5 cut(s) 488, 606, 1384, 1477, 1492
EcoT14I CCWWGG 1 cut(s) 1662
EcoT22I ATGCAT 2 cut(s) 555, 1657
EcoT38I GRGCYC 1 cut(s) 33
ErhI CCWWGG 1 cut(s) 1662
FaeI CATG 8 cut(s) 194, 262, 557, 841, 1393, 1429, 1442, 1666
FaqI GGGAC 5 cut(s) 404, 506, 1714, 1778, 1849
FatI CATG 8 cut(s) 190, 258, 553, 837, 1389, 1425, 1438, 1662
FauI CCCGC 3 cut(s) 44, 429, 1691
FblI GTMKAC 1 cut(s) 1433
Fnu4HI GCNGC 7 cut(s) 82, 425, 761, 764, 1044, 1250, 1668
FokI GGATG 7 cut(s) 315, 321, 327, 963, 1209, 1349, 1573
FriOI GRGCYC 1 cut(s) 33
Fsp4HI GCNGC 7 cut(s) 82, 425, 761, 764, 1044, 1250, 1668
FspBI CTAG 3 cut(s) 285, 353, 1452
GlaI GCGC 4 cut(s) 436, 574, 605, 1383
GluI GCNGC 7 cut(s) 82, 425, 761, 764, 1044, 1250, 1668
GsuI CTGGAG 2 cut(s) 370, 611
HaeIII GGCC 1 cut(s) 1884
HgaI GACGC 2 cut(s) 203, 406
HhaI GCGC 4 cut(s) 437, 575, 606, 1384
Hin1I GRCGYC 2 cut(s) 195, 417
Hin1II CATG 8 cut(s) 194, 262, 557, 841, 1393, 1429, 1442, 1666
Hin6I GCGC 4 cut(s) 435, 573, 604, 1382
HinP1I GCGC 4 cut(s) 435, 573, 604, 1382
HincII GTYRAC 6 cut(s) 129, 625, 652, 1091, 1259, 1499
HindII GTYRAC 6 cut(s) 129, 625, 652, 1091, 1259, 1499
HpaI GTTAAC 1 cut(s) 652
HphI GGTGA 3 cut(s) 523, 785, 1256
Hpy166II GTNNAC 8 cut(s) 129, 625, 652, 1091, 1259, 1434, 1499, 1816
Hpy188III TCNNGA 6 cut(s) 235, 285, 448, 992, 1283, 1623
Hpy8I GTNNAC 8 cut(s) 129, 625, 652, 1091, 1259, 1434, 1499, 1816
Hpy99I CGWCG 7 cut(s) 253, 302, 365, 368, 371, 374, 377
HpyAV CCTTC 7 cut(s) 628, 704, 990, 995, 1236, 1551, 1755
HpyCH4III ACNGT 7 cut(s) 1413, 1532, 1553, 1572, 1712, 1783, 1850
HpyCH4IV ACGT 4 cut(s) 125, 248, 478, 1501
HpyF10VI GCNNNNNNNGC 3 cut(s) 1040, 1177, 1582
HpySE526I ACGT 4 cut(s) 125, 248, 478, 1501
Hsp92I GRCGYC 2 cut(s) 195, 417
Hsp92II CATG 8 cut(s) 194, 262, 557, 841, 1393, 1429, 1442, 1666
HspAI GCGC 4 cut(s) 435, 573, 604, 1382
KpnI GGTACC 1 cut(s) 1220
KspAI GTTAAC 1 cut(s) 652
Kzo9I GATC 8 cut(s) 137, 231, 287, 466, 790, 1285, 1445, 1535
LmnI GCTCC 6 cut(s) 816, 853, 892, 931, 1198, 1285
Lsp1109I GCAGC 7 cut(s) 93, 436, 747, 775, 1055, 1261, 1654
LweI GCATC 2 cut(s) 540, 1371
MabI ACCWGGT 1 cut(s) 1492
MaeI CTAG 3 cut(s) 285, 353, 1452
MaeII ACGT 4 cut(s) 125, 248, 478, 1501
MaeIII GTNAC 2 cut(s) 429, 1173
MalI GATC 8 cut(s) 139, 233, 289, 468, 792, 1287, 1447, 1537
MbiI CCGCTC 1 cut(s) 51
MboI GATC 8 cut(s) 137, 231, 287, 466, 790, 1285, 1445, 1535
MflI RGATCY 2 cut(s) 287, 1535
MhlI GDGCHC 1 cut(s) 33
MlsI TGGCCA 1 cut(s) 1884
MluCI AATT 7 cut(s) 119, 163, 200, 544, 616, 1308, 1456
MluNI TGGCCA 1 cut(s) 1884
MlyI GAGTC 5 cut(s) 64, 588, 589, 1264, 1694
MmeI TCCRAC 4 cut(s) 83, 231, 321, 783
Mox20I TGGCCA 1 cut(s) 1884
Mph1103I ATGCAT 2 cut(s) 555, 1657
MscI TGGCCA 1 cut(s) 1884
MseI TTAA 5 cut(s) 122, 651, 698, 786, 1821
MslI CAYNNNNRTG 1 cut(s) 1551
Msp20I TGGCCA 1 cut(s) 1884
MspA1I CMGCKG 2 cut(s) 760, 1214
MspCI CTTAAG 1 cut(s) 785
MspR9I CCNGG 5 cut(s) 490, 608, 1386, 1479, 1494
MvaI CCWGG 5 cut(s) 490, 608, 1386, 1479, 1494
MvnI CGCG 2 cut(s) 435, 456
MwoI GCNNNNNNNGC 3 cut(s) 1040, 1177, 1582
NcoI CCATGG 1 cut(s) 1662
NdeII GATC 8 cut(s) 137, 231, 287, 466, 790, 1285, 1445, 1535
NlaIII CATG 8 cut(s) 194, 262, 557, 841, 1393, 1429, 1442, 1666
NlaIV GGNNCC 3 cut(s) 1116, 1218, 1423
NmeAIII GCCGAG 1 cut(s) 1091
NmuCI GTSAC 2 cut(s) 429, 1173
NsiI ATGCAT 2 cut(s) 555, 1657
NspI RCATGY 1 cut(s) 557
OliI CACNNNNGTG 1 cut(s) 1551
PaeI GCATGC 1 cut(s) 557
PaeR7I CTCGAG 1 cut(s) 446
PaqCI CACCTGC 1 cut(s) 1275
PcsI WCGNNNNNNNCGW 4 cut(s) 233, 366, 369, 372
PfeI GAWTC 7 cut(s) 177, 451, 1100, 1126, 1556, 1691, 1755
Pfl23II CGTACG 1 cut(s) 406
PflFI GACNNNGTC 1 cut(s) 1769
PflMI CCANNNNNTGG 1 cut(s) 802
PkrI GCNGC 7 cut(s) 83, 426, 762, 765, 1045, 1251, 1669
PleI GAGTC 5 cut(s) 63, 587, 589, 1263, 1693
PpsI GAGTC 5 cut(s) 63, 587, 589, 1263, 1693
Psp1406I AACGTT 2 cut(s) 125, 1501
Psp6I CCWGG 5 cut(s) 488, 606, 1384, 1477, 1492
PspGI CCWGG 5 cut(s) 488, 606, 1384, 1477, 1492
PspLI CGTACG 1 cut(s) 406
PspN4I GGNNCC 3 cut(s) 1116, 1218, 1423
PspPI GGNCC 1 cut(s) 1816
PstI CTGCAG 1 cut(s) 765
PstNI CAGNNNCTG 1 cut(s) 1694
PsuI RGATCY 2 cut(s) 287, 1535
PsyI GACNNNGTC 1 cut(s) 1769
PvuII CAGCTG 1 cut(s) 760
RsaI GTAC 3 cut(s) 408, 972, 1218
RsaNI GTAC 3 cut(s) 407, 971, 1217
RseI CAYNNNNRTG 1 cut(s) 1551
SaqAI TTAA 5 cut(s) 122, 651, 698, 786, 1821
SatI GCNGC 7 cut(s) 82, 425, 761, 764, 1044, 1250, 1668
Sau3AI GATC 8 cut(s) 137, 231, 287, 466, 790, 1285, 1445, 1535
Sau96I GGNCC 1 cut(s) 1816
SchI GAGTC 5 cut(s) 64, 588, 589, 1264, 1694
ScrFI CCNGG 5 cut(s) 490, 608, 1386, 1479, 1494
SduI GDGCHC 1 cut(s) 33
SexAI ACCWGGT 1 cut(s) 1492
SfaNI GCATC 2 cut(s) 540, 1371
SfcI CTRYAG 3 cut(s) 761, 1038, 1549
Sfr274I CTCGAG 1 cut(s) 446
SinI GGWCC 1 cut(s) 1816
SlaI CTCGAG 1 cut(s) 446
SmiMI CAYNNNNRTG 1 cut(s) 1551
SmlI CTYRAG 4 cut(s) 446, 785, 1161, 1621
SmoI CTYRAG 4 cut(s) 446, 785, 1161, 1621
SphI GCATGC 1 cut(s) 557
Sse9I AATT 7 cut(s) 119, 163, 200, 544, 616, 1308, 1456
SsiI CCGC 5 cut(s) 51, 422, 456, 1214, 1698
SspMI CTAG 3 cut(s) 285, 353, 1452
StyD4I CCNGG 5 cut(s) 488, 606, 1384, 1477, 1492
StyI CCWWGG 1 cut(s) 1662
TaaI ACNGT 7 cut(s) 1413, 1532, 1553, 1572, 1712, 1783, 1850
TaiI ACGT 4 cut(s) 128, 251, 481, 1504
TaqI TCGA 5 cut(s) 106, 136, 155, 447, 1124
TaqII GACCGA 2 cut(s) 1458, 1585
TasI AATT 7 cut(s) 119, 163, 200, 544, 616, 1308, 1456
TatI WGTACW 1 cut(s) 970
TfiI GAWTC 7 cut(s) 177, 451, 1100, 1126, 1556, 1691, 1755
Tru1I TTAA 5 cut(s) 122, 651, 698, 786, 1821
Tru9I TTAA 5 cut(s) 122, 651, 698, 786, 1821
TscAI CASTG 6 cut(s) 564, 1558, 1678, 1788, 1818, 1855
TseFI GTSAC 2 cut(s) 429, 1173
TseI GCWGC 7 cut(s) 81, 424, 760, 763, 1043, 1249, 1667
Tsp45I GTSAC 2 cut(s) 429, 1173
TspDTI ATGAA 6 cut(s) 17, 247, 383, 1293, 1580, 1859
TspRI CASTG 6 cut(s) 564, 1558, 1678, 1788, 1818, 1855
Tth111I GACNNNGTC 1 cut(s) 1769
Van91I CCANNNNNTGG 1 cut(s) 802
Vha464I CTTAAG 1 cut(s) 785
VpaK11BI GGWCC 1 cut(s) 1816
XapI RAATTY 1 cut(s) 616
XbaI TCTAGA 1 cut(s) 284
XceI RCATGY 1 cut(s) 557
XhoI CTCGAG 1 cut(s) 446
XmiI GTMKAC 1 cut(s) 1433
XspI CTAG 3 cut(s) 285, 353, 1452
Zsp2I ATGCAT 2 cut(s) 555, 1657
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.