Rh7CG135700

UBA-like domain (DUF1421)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0013667
Physical Location & Seq
Reverse (-)
11026970 .. 11029955
2986 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG135700.1

Sequence Viewer

Length: 1749 bp
ATGAGGCTAAGGCTTCAACTTGTAAGTCAATTATGGTTGACACCTCGATCTCATTGTTTGCACTCAAAACACAAATCTGAGCTTGGAATCTCAGAAAAGCATGACGCCAAATTACGCAATAAGCCCAACAATCCTACGCCGATCACGATGAGAACAACGTCGGAGTTCATGGACAAGCAGATTATGGAACTTTCTAGATCCTACTCCGACGACTTCTCTCAGCTCACATACCCTCCTCATCCTCATCCTCATCCTCATCAGCTAGAAAACGACGACGACGACGACGACTTGCTCTCCAGCTTTCATTTCCGCCCCGTACGGCAGCAGTCACGCGCCTCCACGCTCGAGAATCGAGGTTCTATGGATCAAACTGAACGTGCGAAATCCAGGGACTTGGTGATGATTTCGGTGATTGATGGGAAGATGAACCAGCATTTTGGTAATTTGATGCATGCAGTGGAGGGGCTCAGCGCACGAGTCTCTCAGCTGGAGACTCGGTTGCGCCTGGTAGAGAATTCTGTTGACGACTTGAAGGATTGTTCTGATGTTAACTATGGCAAGACTGATGGGAAGCTGAGGGAAGTAGAACACATTTTGAGAAAGGTTGAAGGTGGTATGCAGGATTTGAGAGATAAGCAAGAGATCTCAGAGGCTCAGCTGCAGCTTGCAAAACTTCAAATGCTTAAGGATCACCAGAAGTTGGAACAAGAAAGGAGCAATGTGCAAACAACTTCCGCGTCATCTGCTCCTCAGCAATCCCACCAATCATATTCAACTCCTGTTGCTCCTCATCAATCCCACCAATCATATTCAACTCCTGTTGCTTCTGTACAACATCCTTCCCTTCCTCCTGATATTCCCCCAACCCGGACCCATCAGAACTTTACACCAGCACCTACAGCAGCTCAGCTTCCAGCTCAGTCATCTCAGTATCAAACTCCTTATAGTCAACAGCCAGATTCTAACTACTCGGCACCTGTGTTGAATCCACCACCCACACCTCAGGCATACTATATGTCTCAAGTTCAGCAGTCGCAACCACCTCCCACAGCACCGTATCAACCCTATCCAGCAGTACCACATCCTTCACAAACATCACATTTTCAGCAGCAGAGTCAACTTCACCCGCCTCTCAATGCTCCTGATCCACAAGCCCAGTATTCATCGATTCACAATCCAGCAGAAACCCCCTATGGGTTATCTCAAAGCTATCCCCAGAGCATCCACAAAACCTCTAATGCGCCTGGTGTGGATCTACCATCACAACAACAGTTTGAGGGTTCCATGCAGTATACACATGACCGATCTACTAGAAATTACAGCACAGACTTCTCCCCTGGAAATATGCAACCAGTTCAACGTTCAAGCTACGATGACTTTTATTCCCACGGCGGATCTCCTTCTCACTACAGTGATTCAAAAATGAAACAGTCGCAAGTATCGCCATCCTCTTCGGTCGCTTCTGGTGGAAGCAGTTTCTCAAGACTGCCAACTGCAAAGGTATTGCCGTATGCATTACCCATGGCTGCCAGTGTGGATAAGGAGTCAGATTCTGGCGGGACTGGAAACCGCGTTCCAGTTGATAATGTCATTGATAAGGTTGTAGCTATGGGATTCCGAAGGGACATAGTCAGAGCAACAGTGAGGAAAATGGCTGAGAATGGGCAGGCAGTGGACCTTAATGTTGTGCTGGATAAACTGATGAACAGTGGAGAAGTTCAGTCCCAAAGTGGTGGATTTGGCCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1421

Protein Analysis

582

Amino Acids

64.76

Weight (kDa)

6.51

Isoelectric Point (pI)

65.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1421 PF07223 527 - 570 2.6e-19 UBA-like domain (DUF1421)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013667)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g05870 FvH4_5g05870
malus_domestica MD06G1169700.v1.1 MD14G1175200.v1.1
prunus_persica Prupe.5G168500_v2.0.a1
pyrus_communis pycom06g15100 pycom14g14620
rosa_chinensis RchiOBHm_Chr7g0192951
rosa_laevigata RLG00000004309
rosa_multiflora Rmu_sc0002040.1_g000061
rosa_roxburghii Rroxscaffold_3G00262510
rosa_rugosa Rorug07G0006400 Rorug07G0294800
rosa_samantha Rh7AG131600 Rh7BG132500 Rh7CG135700 Rh7DG133600
rosa_wichuraiana Rw7G011230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 973
AccB7I CCANNNNNTGG 1 cut(s) 700
AccI GTMKAC 1 cut(s) 1292
AccII CGCG 3 cut(s) 333, 737, 1572
AciI CCGC 6 cut(s) 310, 735, 1127, 1392, 1557, 1570
AclI AACGTT 1 cut(s) 1360
AclWI GGATC 6 cut(s) 192, 372, 696, 1139, 1260, 1402
AcoI YGGCCR 1 cut(s) 1741
AcsI RAATTY 1 cut(s) 514
AcyI GRCGYC 1 cut(s) 105
AfaI GTAC 3 cut(s) 318, 831, 1077
AfiI CCNNNNNNNGG 3 cut(s) 700, 867, 1194
AflII CTTAAG 1 cut(s) 683
AjnI CCWGG 4 cut(s) 386, 504, 1243, 1336
AleI CACNNNNGTG 1 cut(s) 1410
AloI GAACNNNNNNTCC 2 cut(s) 1557, 1589
Alw26I GTCTC 3 cut(s) 484, 485, 1023
AlwI GGATC 6 cut(s) 192, 372, 696, 1139, 1260, 1402
AlwNI CAGNNNCTG 1 cut(s) 1553
Ama87I CYCGRG 1 cut(s) 344
AoxI GGCC 1 cut(s) 1741
ApeKI GCWGC 6 cut(s) 322, 658, 661, 902, 1108, 1526
ApoI RAATTY 1 cut(s) 514
AspLEI GCGC 4 cut(s) 335, 473, 504, 1243
AspS9I GGNCC 2 cut(s) 870, 1675
AsuC2I CCSGG 1 cut(s) 868
AsuHPI GGTGA 4 cut(s) 409, 421, 683, 1115
AvaI CYCGRG 1 cut(s) 344
AvaII GGWCC 2 cut(s) 870, 1675
AxyI CCTNAGG 1 cut(s) 1002
BalI TGGCCA 1 cut(s) 1743
BanI GGYRCC 1 cut(s) 973
BanII GRGCYC 1 cut(s) 468
BauI CACGAG 1 cut(s) 474
BbvCI CCTCAGC 2 cut(s) 575, 750
BbvI GCAGC 6 cut(s) 334, 645, 673, 914, 1120, 1513
BccI CCATC 5 cut(s) 410, 560, 882, 1267, 1453
BceAI ACGGC 3 cut(s) 335, 1405, 1492
BciT130I CCWGG 4 cut(s) 388, 506, 1245, 1338
BcnI CCSGG 1 cut(s) 868
BcoDI GTCTC 3 cut(s) 484, 485, 1023
BfaI CTAG 3 cut(s) 195, 263, 1311
BfmI CTRYAG 3 cut(s) 659, 897, 1408
BfrI CTTAAG 1 cut(s) 683
BglII AGATCT 1 cut(s) 642
BisI GCNGC 6 cut(s) 323, 659, 662, 903, 1109, 1527
BlpI GCTNAGC 3 cut(s) 467, 654, 906
BlsI GCNGC 6 cut(s) 324, 660, 663, 904, 1110, 1528
Bme1390I CCNGG 5 cut(s) 388, 506, 868, 1245, 1338
Bme18I GGWCC 2 cut(s) 870, 1675
BmeT110I CYCGRG 1 cut(s) 344
BmgT120I GGNCC 2 cut(s) 870, 1675
BmiI GGNNCC 3 cut(s) 872, 975, 1282
BmrFI CCNGG 5 cut(s) 388, 506, 868, 1245, 1338
BmrI ACTGGG 1 cut(s) 1150
BmsI GCATC 2 cut(s) 438, 1230
BmuI ACTGGG 1 cut(s) 1150
BpmI CTGGAG 2 cut(s) 280, 509
Bpu10I CCTNAGC 3 cut(s) 8, 575, 750
Bpu1102I GCTNAGC 3 cut(s) 467, 654, 906
BpuEI CTTGAG 2 cut(s) 1005, 1465
BpuMI CCSGG 1 cut(s) 868
Bsa29I ATCGAT 1 cut(s) 1166
BsaHI GRCGYC 1 cut(s) 105
BsaJI CCNNGG 4 cut(s) 387, 1336, 1387, 1521
BsaXI ACNNNNNCTCC 6 cut(s) 217, 247, 278, 308, 482, 512
Bsc4I CCNNNNNNNGG 3 cut(s) 700, 867, 1194
Bse1I ACTGG 6 cut(s) 1156, 1352, 1530, 1567, 1577, 1744
Bse21I CCTNAGG 1 cut(s) 1002
Bse3DI GCAATG 1 cut(s) 724
BseBI CCWGG 4 cut(s) 388, 506, 1245, 1338
BseCI ATCGAT 1 cut(s) 1166
BseDI CCNNGG 4 cut(s) 387, 1336, 1387, 1521
BseGI GGATG 7 cut(s) 238, 244, 250, 835, 1081, 1221, 1445
BseLI CCNNNNNNNGG 3 cut(s) 700, 867, 1194
BseMI GCAATG 1 cut(s) 724
BseNI ACTGG 6 cut(s) 1156, 1352, 1530, 1567, 1577, 1744
BseRI GAGGAG 3 cut(s) 225, 738, 777
BseXI GCAGC 6 cut(s) 334, 645, 673, 914, 1120, 1513
Bsh1236I CGCG 3 cut(s) 333, 737, 1572
Bsh1285I CGRYCG 1 cut(s) 1458
BshFI GGCC 1 cut(s) 1743
BshNI GGYRCC 1 cut(s) 973
BshVI ATCGAT 1 cut(s) 1166
BsiEI CGRYCG 1 cut(s) 1458
BsiHKCI CYCGRG 1 cut(s) 344
BsiSI CCGG 1 cut(s) 868
BsiWI CGTACG 1 cut(s) 316
BslFI GGGAC 4 cut(s) 404, 1573, 1637, 1708
BslI CCNNNNNNNGG 3 cut(s) 700, 867, 1194
BsmAI GTCTC 3 cut(s) 484, 485, 1023
BsmFI GGGAC 4 cut(s) 404, 1573, 1637, 1708
BsnI GGCC 1 cut(s) 1743
BsoBI CYCGRG 1 cut(s) 344
Bsp1286I GDGCHC 1 cut(s) 468
Bsp1407I TGTACA 1 cut(s) 829
Bsp1720I GCTNAGC 3 cut(s) 467, 654, 906
Bsp19I CCATGG 1 cut(s) 1521
BspACI CCGC 6 cut(s) 310, 735, 1127, 1392, 1557, 1570
BspANI GGCC 1 cut(s) 1743
BspDI ATCGAT 1 cut(s) 1166
BspFNI CGCG 3 cut(s) 333, 737, 1572
BspLI GGNNCC 3 cut(s) 872, 975, 1282
BspMAI CTGCAG 1 cut(s) 663
BspPI GGATC 6 cut(s) 192, 372, 696, 1139, 1260, 1402
BspT107I GGYRCC 1 cut(s) 973
BspTI CTTAAG 1 cut(s) 683
BsrDI GCAATG 1 cut(s) 724
BsrGI TGTACA 1 cut(s) 829
BsrI ACTGG 6 cut(s) 1156, 1352, 1530, 1567, 1577, 1744
BssECI CCNNGG 4 cut(s) 387, 1336, 1387, 1521
BssNAI GTATAC 1 cut(s) 1293
BssNI GRCGYC 1 cut(s) 105
BssSI CACGAG 1 cut(s) 474
BssT1I CCWWGG 1 cut(s) 1521
Bst1107I GTATAC 1 cut(s) 1293
Bst2BI CACGAG 1 cut(s) 474
Bst2UI CCWGG 4 cut(s) 388, 506, 1245, 1338
Bst4CI ACNGT 6 cut(s) 1056, 1272, 1412, 1431, 1642, 1709
Bst6I CTCTTC 1 cut(s) 1456
BstACI GRCGYC 1 cut(s) 105
BstAFI CTTAAG 1 cut(s) 683
BstAUI TGTACA 1 cut(s) 829
BstC8I GCNNGC 3 cut(s) 453, 666, 1668
BstDSI CCRYGG 2 cut(s) 1387, 1521
BstF5I GGATG 7 cut(s) 238, 244, 250, 835, 1081, 1221, 1445
BstFNI CGCG 3 cut(s) 333, 737, 1572
BstHHI GCGC 4 cut(s) 335, 473, 504, 1243
BstMAI GTCTC 3 cut(s) 484, 485, 1023
BstMCI CGRYCG 1 cut(s) 1458
BstMWI GCNNNNNNNGC 3 cut(s) 743, 899, 1441
BstNI CCWGG 4 cut(s) 388, 506, 1245, 1338
BstNSI RCATGY 1 cut(s) 455
BstSCI CCNGG 5 cut(s) 386, 504, 866, 1243, 1336
BstSFI CTRYAG 3 cut(s) 659, 897, 1408
BstUI CGCG 3 cut(s) 333, 737, 1572
BstV1I GCAGC 6 cut(s) 334, 645, 673, 914, 1120, 1513
BstX2I RGATCY 4 cut(s) 197, 642, 1252, 1394
BstXI CCANNNNNNTGG 3 cut(s) 394, 437, 1733
BstYI RGATCY 4 cut(s) 197, 642, 1252, 1394
BstZ17I GTATAC 1 cut(s) 1293
Bsu15I ATCGAT 1 cut(s) 1166
Bsu36I CCTNAGG 1 cut(s) 1002
BsuRI GGCC 1 cut(s) 1743
BsuTUI ATCGAT 1 cut(s) 1166
BtgI CCRYGG 2 cut(s) 1387, 1521
BtsCI GGATG 7 cut(s) 238, 244, 250, 835, 1081, 1221, 1445
BtsI GCAGTG 2 cut(s) 462, 1677
BtsIMutI CAGTG 6 cut(s) 462, 1417, 1537, 1647, 1677, 1714
Cac8I GCNNGC 3 cut(s) 453, 666, 1668
CaiI CAGNNNCTG 1 cut(s) 1553
CfoI GCGC 4 cut(s) 335, 473, 504, 1243
Cfr13I GGNCC 2 cut(s) 870, 1675
ClaI ATCGAT 1 cut(s) 1166
CseI GACGC 2 cut(s) 113, 726
Csp6I GTAC 3 cut(s) 317, 830, 1076
CviAII CATG 6 cut(s) 101, 169, 452, 1285, 1298, 1522
CviQI GTAC 3 cut(s) 317, 830, 1076
EaeI YGGCCR 1 cut(s) 1741
Eam1104I CTCTTC 1 cut(s) 1456
EarI CTCTTC 1 cut(s) 1456
EciI GGCGGA 2 cut(s) 299, 1407
Eco130I CCWWGG 1 cut(s) 1521
Eco24I GRGCYC 1 cut(s) 468
Eco47I GGWCC 2 cut(s) 870, 1675
Eco81I CCTNAGG 1 cut(s) 1002
Eco88I CYCGRG 1 cut(s) 344
EcoRI GAATTC 1 cut(s) 514
EcoRII CCWGG 4 cut(s) 386, 504, 1243, 1336
EcoT14I CCWWGG 1 cut(s) 1521
EcoT22I ATGCAT 2 cut(s) 453, 1516
EcoT38I GRGCYC 1 cut(s) 468
ErhI CCWWGG 1 cut(s) 1521
FaeI CATG 6 cut(s) 104, 172, 455, 1288, 1301, 1525
FaqI GGGAC 4 cut(s) 404, 1573, 1637, 1708
FatI CATG 6 cut(s) 100, 168, 451, 1284, 1297, 1521
FauI CCCGC 2 cut(s) 1134, 1550
FblI GTMKAC 1 cut(s) 1292
Fnu4HI GCNGC 6 cut(s) 323, 659, 662, 903, 1109, 1527
FokI GGATG 7 cut(s) 225, 231, 237, 822, 1068, 1208, 1432
FriOI GRGCYC 1 cut(s) 468
Fsp4HI GCNGC 6 cut(s) 323, 659, 662, 903, 1109, 1527
FspBI CTAG 3 cut(s) 195, 263, 1311
GlaI GCGC 4 cut(s) 334, 472, 503, 1242
GluI GCNGC 6 cut(s) 323, 659, 662, 903, 1109, 1527
GsuI CTGGAG 2 cut(s) 280, 509
HaeIII GGCC 1 cut(s) 1743
HapII CCGG 1 cut(s) 868
HgaI GACGC 2 cut(s) 113, 726
HhaI GCGC 4 cut(s) 335, 473, 504, 1243
Hin1I GRCGYC 1 cut(s) 105
Hin1II CATG 6 cut(s) 104, 172, 455, 1288, 1301, 1525
Hin6I GCGC 4 cut(s) 333, 471, 502, 1241
HinP1I GCGC 4 cut(s) 333, 471, 502, 1241
HincII GTYRAC 5 cut(s) 39, 523, 550, 950, 1118
HindII GTYRAC 5 cut(s) 39, 523, 550, 950, 1118
HpaI GTTAAC 1 cut(s) 550
HpaII CCGG 1 cut(s) 868
HphI GGTGA 4 cut(s) 409, 421, 683, 1115
Hpy166II GTNNAC 7 cut(s) 39, 523, 550, 950, 1118, 1293, 1675
Hpy188III TCNNGA 6 cut(s) 145, 195, 346, 851, 1142, 1482
Hpy8I GTNNAC 7 cut(s) 39, 523, 550, 950, 1118, 1293, 1675
Hpy99I CGWCG 7 cut(s) 163, 212, 275, 278, 281, 284, 287
HpyAV CCTTC 7 cut(s) 526, 602, 849, 854, 1095, 1410, 1614
HpyCH4III ACNGT 6 cut(s) 1056, 1272, 1412, 1431, 1642, 1709
HpyCH4IV ACGT 3 cut(s) 158, 376, 1360
HpyF10VI GCNNNNNNNGC 3 cut(s) 743, 899, 1441
HpySE526I ACGT 3 cut(s) 158, 376, 1360
Hsp92I GRCGYC 1 cut(s) 105
Hsp92II CATG 6 cut(s) 104, 172, 455, 1288, 1301, 1525
HspAI GCGC 4 cut(s) 333, 471, 502, 1241
KspAI GTTAAC 1 cut(s) 550
LmnI GCTCC 4 cut(s) 714, 751, 790, 1144
Lsp1109I GCAGC 6 cut(s) 334, 645, 673, 914, 1120, 1513
LweI GCATC 2 cut(s) 438, 1230
MaeI CTAG 3 cut(s) 195, 263, 1311
MaeII ACGT 3 cut(s) 158, 376, 1360
MaeIII GTNAC 1 cut(s) 327
MboII GAAGA 2 cut(s) 433, 1443
MflI RGATCY 4 cut(s) 197, 642, 1252, 1394
MhlI GDGCHC 1 cut(s) 468
MlsI TGGCCA 1 cut(s) 1743
MluCI AATT 5 cut(s) 29, 110, 442, 514, 1315
MluNI TGGCCA 1 cut(s) 1743
MlyI GAGTC 4 cut(s) 486, 487, 1123, 1553
MmeI TCCRAC 3 cut(s) 141, 231, 681
Mox20I TGGCCA 1 cut(s) 1743
Mph1103I ATGCAT 2 cut(s) 453, 1516
MscI TGGCCA 1 cut(s) 1743
MseI TTAA 3 cut(s) 549, 684, 1680
MslI CAYNNNNRTG 1 cut(s) 1410
Msp20I TGGCCA 1 cut(s) 1743
MspA1I CMGCKG 2 cut(s) 487, 658
MspCI CTTAAG 1 cut(s) 683
MspI CCGG 1 cut(s) 868
MspR9I CCNGG 5 cut(s) 388, 506, 868, 1245, 1338
MvaI CCWGG 4 cut(s) 388, 506, 1245, 1338
MvnI CGCG 3 cut(s) 333, 737, 1572
MwoI GCNNNNNNNGC 3 cut(s) 743, 899, 1441
NciI CCSGG 1 cut(s) 868
NcoI CCATGG 1 cut(s) 1521
NlaIII CATG 6 cut(s) 104, 172, 455, 1288, 1301, 1525
NlaIV GGNNCC 3 cut(s) 872, 975, 1282
NmeAIII GCCGAG 1 cut(s) 950
NmuCI GTSAC 1 cut(s) 327
NsiI ATGCAT 2 cut(s) 453, 1516
NspI RCATGY 1 cut(s) 455
OliI CACNNNNGTG 1 cut(s) 1410
PaeI GCATGC 1 cut(s) 455
PaeR7I CTCGAG 1 cut(s) 344
PcsI WCGNNNNNNNCGW 4 cut(s) 143, 276, 279, 282
PfeI GAWTC 8 cut(s) 87, 349, 959, 985, 1168, 1415, 1550, 1614
Pfl23II CGTACG 1 cut(s) 316
PflFI GACNNNGTC 1 cut(s) 1628
PflMI CCANNNNNTGG 1 cut(s) 700
PkrI GCNGC 6 cut(s) 324, 660, 663, 904, 1110, 1528
PleI GAGTC 4 cut(s) 485, 487, 1122, 1552
PpsI GAGTC 4 cut(s) 485, 487, 1122, 1552
Psp1406I AACGTT 1 cut(s) 1360
Psp6I CCWGG 4 cut(s) 386, 504, 1243, 1336
PspGI CCWGG 4 cut(s) 386, 504, 1243, 1336
PspLI CGTACG 1 cut(s) 316
PspN4I GGNNCC 3 cut(s) 872, 975, 1282
PspPI GGNCC 2 cut(s) 870, 1675
PstI CTGCAG 1 cut(s) 663
PstNI CAGNNNCTG 1 cut(s) 1553
PsuI RGATCY 4 cut(s) 197, 642, 1252, 1394
PsyI GACNNNGTC 1 cut(s) 1628
PvuII CAGCTG 2 cut(s) 487, 658
RsaI GTAC 3 cut(s) 318, 831, 1077
RsaNI GTAC 3 cut(s) 317, 830, 1076
RseI CAYNNNNRTG 1 cut(s) 1410
SaqAI TTAA 3 cut(s) 549, 684, 1680
SatI GCNGC 6 cut(s) 323, 659, 662, 903, 1109, 1527
Sau96I GGNCC 2 cut(s) 870, 1675
SchI GAGTC 4 cut(s) 486, 487, 1123, 1553
ScrFI CCNGG 5 cut(s) 388, 506, 868, 1245, 1338
SduI GDGCHC 1 cut(s) 468
SfaNI GCATC 2 cut(s) 438, 1230
SfcI CTRYAG 3 cut(s) 659, 897, 1408
Sfr274I CTCGAG 1 cut(s) 344
SinI GGWCC 2 cut(s) 870, 1675
SlaI CTCGAG 1 cut(s) 344
SmiMI CAYNNNNRTG 1 cut(s) 1410
SmlI CTYRAG 4 cut(s) 344, 683, 1020, 1480
SmoI CTYRAG 4 cut(s) 344, 683, 1020, 1480
SphI GCATGC 1 cut(s) 455
Sse9I AATT 5 cut(s) 29, 110, 442, 514, 1315
SsiI CCGC 6 cut(s) 310, 735, 1127, 1392, 1557, 1570
SspMI CTAG 3 cut(s) 195, 263, 1311
StyD4I CCNGG 5 cut(s) 386, 504, 866, 1243, 1336
StyI CCWWGG 1 cut(s) 1521
TaaI ACNGT 6 cut(s) 1056, 1272, 1412, 1431, 1642, 1709
TaiI ACGT 3 cut(s) 161, 379, 1363
TaqI TCGA 4 cut(s) 46, 345, 352, 1166
TaqII GACCGA 2 cut(s) 1317, 1444
TasI AATT 5 cut(s) 29, 110, 442, 514, 1315
TatI WGTACW 1 cut(s) 829
TfiI GAWTC 8 cut(s) 87, 349, 959, 985, 1168, 1415, 1550, 1614
Tru1I TTAA 3 cut(s) 549, 684, 1680
Tru9I TTAA 3 cut(s) 549, 684, 1680
TscAI CASTG 6 cut(s) 462, 1417, 1537, 1647, 1677, 1714
TseFI GTSAC 1 cut(s) 327
TseI GCWGC 6 cut(s) 322, 658, 661, 902, 1108, 1526
Tsp45I GTSAC 1 cut(s) 327
TspDTI ATGAA 6 cut(s) 157, 293, 440, 1152, 1439, 1718
TspRI CASTG 6 cut(s) 462, 1417, 1537, 1647, 1677, 1714
Tth111I GACNNNGTC 1 cut(s) 1628
Van91I CCANNNNNTGG 1 cut(s) 700
Vha464I CTTAAG 1 cut(s) 683
VpaK11BI GGWCC 2 cut(s) 870, 1675
XapI RAATTY 1 cut(s) 514
XbaI TCTAGA 1 cut(s) 194
XceI RCATGY 1 cut(s) 455
XhoI CTCGAG 1 cut(s) 344
XmiI GTMKAC 1 cut(s) 1292
XspI CTAG 3 cut(s) 195, 263, 1311
Zsp2I ATGCAT 2 cut(s) 453, 1516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.