Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0008471

Physical Location & Seq

Genomic Coordinates Reverse (-)

31419653 .. 31424357

Gene Structure 4705 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1174000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1422 bp

ATGGCTCTCAATTTATTATCTCCAGCTGAAATCAAAGCCATCTCTTTCTTGGATTCCACCAAGTCCAGCACCCACCTTCCCAAGCTTCCAGGTGGGTTTGCTTTGAGGAGGAGAGATTGCGGAACTGTAATTGGGAGAAGAGTTCAATGCTCGGCTGCACAGACACCTCCTCCAGCTTGGCCTGGACGTGCCGTTGCGGAGACAAGCCGCAGGACTTGGGACGGTCCAAAGCCTATTTCGATTGTTGGATCTACCGGTTCCATTGGAACCCAGACATTAGACATAGTGGCGGAGAACCCGGATAAATTCAGAATTGTGGCGCTGGCAGCTGGTTCAAATGTAACTCTTCTTGTGGATCAGGTGAAGAGATTCAAGCCCCAGCTTGTTGCTGTTGGAAATGAATCACTAGTTAATGAACTTAAAGAGGCCTTGGCTGATTTAGATGAAAAGCCCGAGATTATTCCTGGCGAGCAAGGTGTTGTTGAGGTTGCCCGCCACCCAGATGCAGTCACAGTAGTTACAGGAATTGTAGGTTGTGCAGGACTGAAGCCTACAGTGGCTGCAATAGAAGCAGGGAAAGACATAGCATTAGCCAATAAAGAGACCCTGATTGCTGGAGGCCCTTTTGTTCTTCCTCTTGCCCACAAGCATAATGTAAAAATTCTTCCTGCTGATTCAGAACATTCTGCAATTTTTCAGTGTATACAAGGCTTGCCAGAGGGTGCACTTCGGCGTATCATTTTGACAGCGTCTGGTGGGTCTTTCAGGGATTGGCCTGTTGAGAAATTGAAAGATGTTAAAGTTGCTGATGCCTTGAAGCATCCTAACTGGAATATGGGAAAGAAGATTACTGTTGATTCTGCTACTCTTTTCAATAAGGGTCTCGAAGTCATCGAAGCTCATTACTTGTTTGGAGCTGAATATGATGATATTGAGATTGTGATTCATCCGCAGTCCATTATACATTCAATGATTGAAACGCAGGATTCATCTGTTCTGGCACAACTGGGGTGGCCTGATATGCGCTTGCCAATCCTCTACACCATGTCATGGCCAGATAGAATCTACTGCTCTGAAGTAACTTGGCCTCGTCTTGATCTTTGCAAGCTTGGTTCATTAACCTTTAAAGCTCCTGACAATGTGAAATACCCATCCATGGATCTTGCCTATGCTGCTGGACGGGCCGGTGGCACCATGACAGGAGTTCTTAGTGCAGCAAATGAAAAGGCTGTGGAGATGTTTATCGATGAAAAAATCAGTTATCTAGATATTTTCAAGATTGTGGAGCTAACATGTGCTAAGCACCGGGCCGAACTAGTGGCCTCACCTTCCCTCGAGGAAATTATACATTATGATTTATGGGCAAGAGATTATGCAGCTGATTTGCAAAGCTCTTCAAGCTCAATTCCTGTTTTTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0006081 GO:0006082 GO:0006090 GO:0006629 GO:0006644 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0008654 GO:0009058 GO:0009240 GO:0009987 GO:0016114 GO:0016491 GO:0016614 GO:0016616 GO:0019288 GO:0019637 GO:0019682 GO:0019752 GO:0030145 GO:0030604 GO:0032787 GO:0036094 GO:0043167 GO:0043168 GO:0043169 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0046490 GO:0046872 GO:0046914 GO:0048037 GO:0050661 GO:0050662 GO:0051483 GO:0051484 GO:0055114 GO:0070402 GO:0071704 GO:0090407 GO:0097159 GO:1901135 GO:1901265 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 map00900 map01100 map01110 map01130

Pfam Domains

Protein Families

DXPR_C DXP_redisom_C DXP_reductoisom

Protein Analysis

474

Amino Acids

51.23

Weight (kDa)

5.83

Isoelectric Point (pI)

40.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DXP_reductoisom	PF02670	79 - 207	8.5e-48	1-deoxy-D-xylulose 5-phosphate reductoisomerase
DXP_redisom_C	PF08436	221 - 304	1.9e-38	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
DXPR_C	PF13288	336 - 457	1.6e-36	DXP reductoisomerase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008471)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62790 AT5G62790
fragaria_vesca	FvH4_1g09716 FvH4_1g09717 FvH4_3g27741 FvH4_4g01210 FvH4_5g05300 FvH4_5g38682
malus_domestica	MD06G1174000.v1.1 MD14G1180500.v1.1
prunus_persica	Prupe.5G174000_v2.0.a1
pyrus_communis	pycom06g15530 pycom14g15050
rosa_chinensis	RchiOBHm_Chr7g0193571
rosa_laevigata	RLG00000004262
rosa_multiflora	Rmu_ssc0000035.1_g000001
rosa_roxburghii	Rroxscaffold_3G00262000
rosa_rugosa	Rorug07G0010200
rosa_samantha	Rh7AG137100 Rh7BG137400 Rh7CG140700 Rh7DG138500
rosa_wichuraiana	Rw7G011680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1334
AccB1I	GGYRCC	1 cut(s)	1190
AccB7I	CCANNNNNTGG	1 cut(s)	1050
AccI	GTMKAC	1 cut(s)	703
AciI	CCGC	6 cut(s)	120, 197, 208, 290, 493, 950
AclWI	GGATC	3 cut(s)	256, 363, 1167
AcoI	YGGCCR	1 cut(s)	1052
AcsI	RAATTY	2 cut(s)	305, 660
AcuI	CTGAAG	2 cut(s)	566, 1095
AfiI	CCNNNNNNNGG	2 cut(s)	1050, 1156
AflIII	ACRYGT	1 cut(s)	1292
AgeI	ACCGGT	1 cut(s)	254
AhlI	ACTAGT	2 cut(s)	406, 1315
AjiI	CACGTC	1 cut(s)	188
AjnI	CCWGG	3 cut(s)	88, 181, 463
AjuI	GAANNNNNNNTTGG	2 cut(s)	220, 252
Alw21I	GWGCWC	1 cut(s)	727
Alw26I	GTCTC	3 cut(s)	194, 596, 887
Alw44I	GTGCAC	1 cut(s)	723
AlwI	GGATC	3 cut(s)	256, 363, 1167
AlwNI	CAGNNNCTG	2 cut(s)	560, 752
Ama87I	CYCGRG	2 cut(s)	452, 1334
ApaLI	GTGCAC	1 cut(s)	723
ApeKI	GCWGC	6 cut(s)	155, 326, 560, 1172, 1214, 1376
ApoI	RAATTY	2 cut(s)	305, 660
AsiGI	ACCGGT	1 cut(s)	254
Asp700I	GAANNNNTTC	1 cut(s)	368
AspLEI	GCGC	2 cut(s)	322, 1026
AspS9I	GGNCC	4 cut(s)	224, 620, 1182, 1308
AsuC2I	CCSGG	2 cut(s)	299, 1307
AsuHPI	GGTGA	2 cut(s)	373, 1317
AvaI	CYCGRG	2 cut(s)	452, 1334
AvaII	GGWCC	1 cut(s)	224
BaeGI	GKGCMC	1 cut(s)	727
BalI	TGGCCA	1 cut(s)	1054
BanI	GGYRCC	1 cut(s)	1190
BarI	GAAGNNNNNNTAC	2 cut(s)	648, 680
Bbv12I	GWGCWC	1 cut(s)	727
BbvI	GCAGC	6 cut(s)	142, 338, 547, 1159, 1226, 1388
BccI	CCATC	2 cut(s)	47, 1159
BceAI	ACGGC	1 cut(s)	176
BciT130I	CCWGG	3 cut(s)	90, 183, 465
BcnI	CCSGG	2 cut(s)	299, 1307
BcoDI	GTCTC	3 cut(s)	194, 596, 887
BcuI	ACTAGT	2 cut(s)	406, 1315
BfaI	CTAG	3 cut(s)	407, 1265, 1316
BfmI	CTRYAG	1 cut(s)	552
BfoI	RGCGCY	1 cut(s)	323
BisI	GCNGC	7 cut(s)	156, 208, 327, 561, 1173, 1215, 1377
BlpI	GCTNAGC	1 cut(s)	1299
BlsI	GCNGC	7 cut(s)	157, 209, 328, 562, 1174, 1216, 1378
Bme1390I	CCNGG	5 cut(s)	90, 183, 299, 465, 1307
Bme18I	GGWCC	1 cut(s)	224
BmeT110I	CYCGRG	2 cut(s)	452, 1334
BmgBI	CACGTC	1 cut(s)	188
BmgT120I	GGNCC	4 cut(s)	224, 620, 1182, 1308
BmiI	GGNNCC	3 cut(s)	259, 268, 1192
BmrFI	CCNGG	5 cut(s)	90, 183, 299, 465, 1307
BmrI	ACTGGG	1 cut(s)	1016
BmsI	GCATC	3 cut(s)	493, 799, 829
BmuI	ACTGGG	1 cut(s)	1016
BpmI	CTGGAG	3 cut(s)	6, 156, 636
Bpu1102I	GCTNAGC	1 cut(s)	1299
BpuMI	CCSGG	2 cut(s)	299, 1307
Bsa29I	ATCGAT	1 cut(s)	1245
BsaBI	GATNNNNATC	1 cut(s)	1241
BsaI	GGTCTC	2 cut(s)	596, 887
BsaJI	CCNNGG	2 cut(s)	429, 1155
BsaWI	WCCGGW	1 cut(s)	254
BsaXI	ACNNNNNCTCC	2 cut(s)	154, 184
Bsc4I	CCNNNNNNNGG	2 cut(s)	1050, 1156
Bse118I	RCCGGY	2 cut(s)	254, 1184
Bse1I	ACTGG	2 cut(s)	833, 1011
Bse8I	GATNNNNATC	1 cut(s)	1241
BseBI	CCWGG	3 cut(s)	90, 183, 465
BseCI	ATCGAT	1 cut(s)	1245
BseDI	CCNNGG	2 cut(s)	429, 1155
BseGI	GGATG	3 cut(s)	820, 946, 1151
BseJI	GATNNNNATC	1 cut(s)	1241
BseLI	CCNNNNNNNGG	2 cut(s)	1050, 1156
BseNI	ACTGG	2 cut(s)	833, 1011
BseRI	GAGGAG	3 cut(s)	121, 124, 159
BseSI	GKGCMC	1 cut(s)	727
BseXI	GCAGC	6 cut(s)	142, 338, 547, 1159, 1226, 1388
BseYI	CCCAGC	1 cut(s)	378
BsgI	GTGCAG	3 cut(s)	141, 558, 1233
BshNI	GGYRCC	1 cut(s)	1190
BshTI	ACCGGT	1 cut(s)	254
BshVI	ATCGAT	1 cut(s)	1245
BsiHKAI	GWGCWC	1 cut(s)	727
BsiHKCI	CYCGRG	2 cut(s)	452, 1334
BsiSI	CCGG	4 cut(s)	255, 299, 1185, 1306
BslFI	GGGAC	1 cut(s)	233
BslI	CCNNNNNNNGG	2 cut(s)	1050, 1156
BsmAI	GTCTC	3 cut(s)	194, 596, 887
BsmFI	GGGAC	1 cut(s)	233
Bso31I	GGTCTC	2 cut(s)	596, 887
BsoBI	CYCGRG	2 cut(s)	452, 1334
Bsp1286I	GDGCHC	1 cut(s)	727
Bsp143I	GATC	4 cut(s)	248, 355, 1096, 1159
Bsp1720I	GCTNAGC	1 cut(s)	1299
Bsp19I	CCATGG	1 cut(s)	1155
BspACI	CCGC	6 cut(s)	120, 197, 208, 290, 493, 950
BspDI	ATCGAT	1 cut(s)	1245
BspLI	GGNNCC	3 cut(s)	259, 268, 1192
BspPI	GGATC	3 cut(s)	256, 363, 1167
BspQI	GCTCTTC	1 cut(s)	1399
BspT107I	GGYRCC	1 cut(s)	1190
BspTNI	GGTCTC	2 cut(s)	596, 887
BsrFI	RCCGGY	2 cut(s)	254, 1184
BsrI	ACTGG	2 cut(s)	833, 1011
BssAI	RCCGGY	2 cut(s)	254, 1184
BssECI	CCNNGG	2 cut(s)	429, 1155
BssMI	GATC	4 cut(s)	248, 355, 1096, 1159
BssNAI	GTATAC	1 cut(s)	704
BssT1I	CCWWGG	2 cut(s)	429, 1155
Bst1107I	GTATAC	1 cut(s)	704
Bst2UI	CCWGG	3 cut(s)	90, 183, 465
Bst4CI	ACNGT	5 cut(s)	127, 224, 514, 556, 853
Bst6I	CTCTTC	4 cut(s)	133, 351, 359, 1399
BstC8I	GCNNGC	6 cut(s)	324, 470, 493, 713, 1028, 1106
BstDEI	CTNAG	2 cut(s)	1208, 1299
BstDSI	CCRYGG	1 cut(s)	1155
BstF5I	GGATG	3 cut(s)	820, 946, 1151
BstH2I	RGCGCY	1 cut(s)	323
BstHHI	GCGC	2 cut(s)	322, 1026
BstKTI	GATC	4 cut(s)	251, 358, 1099, 1162
BstMAI	GTCTC	3 cut(s)	194, 596, 887
BstMBI	GATC	4 cut(s)	248, 355, 1096, 1159
BstMWI	GCNNNNNNNGC	6 cut(s)	326, 569, 1021, 1172, 1181, 1398
BstNI	CCWGG	3 cut(s)	90, 183, 465
BstNSI	RCATGY	1 cut(s)	1296
BstSCI	CCNGG	5 cut(s)	88, 181, 297, 463, 1305
BstSFI	CTRYAG	1 cut(s)	552
BstSLI	GKGCMC	1 cut(s)	727
BstV1I	GCAGC	6 cut(s)	142, 338, 547, 1159, 1226, 1388
BstX2I	RGATCY	2 cut(s)	248, 1159
BstYI	RGATCY	2 cut(s)	248, 1159
BstZ17I	GTATAC	1 cut(s)	704
Bsu15I	ATCGAT	1 cut(s)	1245
BsuTUI	ATCGAT	1 cut(s)	1245
BtgI	CCRYGG	1 cut(s)	1155
BtrI	CACGTC	1 cut(s)	188
BtsCI	GGATG	3 cut(s)	820, 946, 1151
BtsIMutI	CAGTG	2 cut(s)	561, 704
Cac8I	GCNNGC	6 cut(s)	324, 470, 493, 713, 1028, 1106
CaiI	CAGNNNCTG	2 cut(s)	560, 752
CfoI	GCGC	2 cut(s)	322, 1026
Cfr10I	RCCGGY	2 cut(s)	254, 1184
Cfr13I	GGNCC	4 cut(s)	224, 620, 1182, 1308
ClaI	ATCGAT	1 cut(s)	1245
CseI	GACGC	1 cut(s)	738
CspAI	ACCGGT	1 cut(s)	254
CspCI	CAANNNNNGTGG	2 cut(s)	992, 1027
CviAII	CATG	6 cut(s)	1045, 1050, 1156, 1195, 1293, 1419
DdeI	CTNAG	2 cut(s)	1208, 1299
DpnI	GATC	4 cut(s)	250, 357, 1098, 1161
DpnII	GATC	4 cut(s)	248, 355, 1096, 1159
DraI	TTTAAA	1 cut(s)	1126
EaeI	YGGCCR	1 cut(s)	1052
Eam1104I	CTCTTC	4 cut(s)	133, 351, 359, 1399
EarI	CTCTTC	4 cut(s)	133, 351, 359, 1399
EciI	GGCGGA	1 cut(s)	305
Eco130I	CCWWGG	2 cut(s)	429, 1155
Eco147I	AGGCCT	1 cut(s)	428
Eco31I	GGTCTC	2 cut(s)	596, 887
Eco47I	GGWCC	1 cut(s)	224
Eco57I	CTGAAG	2 cut(s)	566, 1095
Eco88I	CYCGRG	2 cut(s)	452, 1334
EcoO109I	RGGNCCY	1 cut(s)	620
EcoRII	CCWGG	3 cut(s)	88, 181, 463
EcoT14I	CCWWGG	2 cut(s)	429, 1155
ErhI	CCWWGG	2 cut(s)	429, 1155
FaeI	CATG	6 cut(s)	1048, 1053, 1159, 1198, 1296, 1422
FaqI	GGGAC	1 cut(s)	233
FatI	CATG	6 cut(s)	1044, 1049, 1155, 1194, 1292, 1418
FauI	CCCGC	1 cut(s)	500
FblI	GTMKAC	1 cut(s)	703
Fnu4HI	GCNGC	7 cut(s)	156, 208, 327, 561, 1173, 1215, 1377
FokI	GGATG	3 cut(s)	807, 933, 1138
Fsp4HI	GCNGC	7 cut(s)	156, 208, 327, 561, 1173, 1215, 1377
FspBI	CTAG	3 cut(s)	407, 1265, 1316
GlaI	GCGC	2 cut(s)	321, 1025
GluI	GCNGC	7 cut(s)	156, 208, 327, 561, 1173, 1215, 1377
GsaI	CCCAGC	1 cut(s)	382
GsuI	CTGGAG	3 cut(s)	6, 156, 636
HaeII	RGCGCY	1 cut(s)	323
HapII	CCGG	4 cut(s)	255, 299, 1185, 1306
HgaI	GACGC	1 cut(s)	738
HhaI	GCGC	2 cut(s)	322, 1026
Hin1II	CATG	6 cut(s)	1048, 1053, 1159, 1198, 1296, 1422
Hin6I	GCGC	2 cut(s)	320, 1024
HinP1I	GCGC	2 cut(s)	320, 1024
HindIII	AAGCTT	2 cut(s)	83, 1106
HinfI	GANTC	8 cut(s)	53, 369, 401, 674, 857, 943, 986, 1062
HpaII	CCGG	4 cut(s)	255, 299, 1185, 1306
HphI	GGTGA	2 cut(s)	373, 1317
Hpy166II	GTNNAC	2 cut(s)	704, 725
Hpy188I	TCNGA	3 cut(s)	311, 679, 1075
Hpy188III	TCNNGA	5 cut(s)	884, 1094, 1133, 1265, 1276
Hpy8I	GTNNAC	2 cut(s)	704, 725
HpyAV	CCTTC	2 cut(s)	86, 1338
HpyCH4III	ACNGT	5 cut(s)	127, 224, 514, 556, 853
HpyCH4IV	ACGT	1 cut(s)	187
HpyF10VI	GCNNNNNNNGC	6 cut(s)	326, 569, 1021, 1172, 1181, 1398
HpyF3I	CTNAG	2 cut(s)	1208, 1299
HpySE526I	ACGT	1 cut(s)	187
Hsp92II	CATG	6 cut(s)	1048, 1053, 1159, 1198, 1296, 1422
HspAI	GCGC	2 cut(s)	320, 1024
Kzo9I	GATC	4 cut(s)	248, 355, 1096, 1159
LguI	GCTCTTC	1 cut(s)	1399
LmnI	GCTCC	3 cut(s)	914, 1135, 1285
Lsp1109I	GCAGC	6 cut(s)	142, 338, 547, 1159, 1226, 1388
LweI	GCATC	3 cut(s)	493, 799, 829
MaeI	CTAG	3 cut(s)	407, 1265, 1316
MaeII	ACGT	1 cut(s)	187
MaeIII	GTNAC	4 cut(s)	340, 508, 517, 1078
MalI	GATC	4 cut(s)	250, 357, 1098, 1161
MboI	GATC	4 cut(s)	248, 355, 1096, 1159
MboII	GAAGA	7 cut(s)	150, 338, 376, 623, 656, 856, 1386
MflI	RGATCY	2 cut(s)	248, 1159
MhlI	GDGCHC	1 cut(s)	727
MlsI	TGGCCA	1 cut(s)	1054
MluNI	TGGCCA	1 cut(s)	1054
MmeI	TCCRAC	2 cut(s)	226, 373
Mox20I	TGGCCA	1 cut(s)	1054
MroXI	GAANNNNTTC	1 cut(s)	368
MscI	TGGCCA	1 cut(s)	1054
MseI	TTAA	5 cut(s)	411, 420, 798, 1118, 1125
MslI	CAYNNNNRTG	1 cut(s)	501
Msp20I	TGGCCA	1 cut(s)	1054
MspA1I	CMGCKG	3 cut(s)	26, 329, 1379
MspI	CCGG	4 cut(s)	255, 299, 1185, 1306
MspR9I	CCNGG	5 cut(s)	90, 183, 299, 465, 1307
MvaI	CCWGG	3 cut(s)	90, 183, 465
MwoI	GCNNNNNNNGC	6 cut(s)	326, 569, 1021, 1172, 1181, 1398
NciI	CCSGG	2 cut(s)	299, 1307
NcoI	CCATGG	1 cut(s)	1155
NdeII	GATC	4 cut(s)	248, 355, 1096, 1159
NlaIII	CATG	6 cut(s)	1048, 1053, 1159, 1198, 1296, 1422
NlaIV	GGNNCC	3 cut(s)	259, 268, 1192
NmeAIII	GCCGAG	1 cut(s)	131
NmuCI	GTSAC	1 cut(s)	508
NspI	RCATGY	1 cut(s)	1296
PaeR7I	CTCGAG	1 cut(s)	1334
PceI	AGGCCT	1 cut(s)	428
PciI	ACATGT	1 cut(s)	1292
PciSI	GCTCTTC	1 cut(s)	1399
PcsI	WCGNNNNNNNCGW	1 cut(s)	891
PdmI	GAANNNNTTC	1 cut(s)	368
PfeI	GAWTC	8 cut(s)	53, 369, 401, 674, 857, 943, 986, 1062
PflFI	GACNNNGTC	1 cut(s)	748
PflMI	CCANNNNNTGG	1 cut(s)	1050
PinAI	ACCGGT	1 cut(s)	254
PkrI	GCNGC	7 cut(s)	157, 209, 328, 562, 1174, 1216, 1378
PscI	ACATGT	1 cut(s)	1292
Psp6I	CCWGG	3 cut(s)	88, 181, 463
PspFI	CCCAGC	1 cut(s)	378
PspGI	CCWGG	3 cut(s)	88, 181, 463
PspN4I	GGNNCC	3 cut(s)	259, 268, 1192
PspPI	GGNCC	4 cut(s)	224, 620, 1182, 1308
PspXI	VCTCGAGB	1 cut(s)	1334
PstNI	CAGNNNCTG	2 cut(s)	560, 752
PsuI	RGATCY	2 cut(s)	248, 1159
PsyI	GACNNNGTC	1 cut(s)	748
PvuII	CAGCTG	3 cut(s)	26, 329, 1379
RseI	CAYNNNNRTG	1 cut(s)	501
SapI	GCTCTTC	1 cut(s)	1399
SaqAI	TTAA	5 cut(s)	411, 420, 798, 1118, 1125
SatI	GCNGC	7 cut(s)	156, 208, 327, 561, 1173, 1215, 1377
Sau3AI	GATC	4 cut(s)	248, 355, 1096, 1159
Sau96I	GGNCC	4 cut(s)	224, 620, 1182, 1308
ScrFI	CCNGG	5 cut(s)	90, 183, 299, 465, 1307
SduI	GDGCHC	1 cut(s)	727
SfaNI	GCATC	3 cut(s)	493, 799, 829
SfcI	CTRYAG	1 cut(s)	552
Sfr274I	CTCGAG	1 cut(s)	1334
SinI	GGWCC	1 cut(s)	224
SlaI	CTCGAG	1 cut(s)	1334
SmiMI	CAYNNNNRTG	1 cut(s)	501
SmlI	CTYRAG	1 cut(s)	1334
SmoI	CTYRAG	1 cut(s)	1334
SpeI	ACTAGT	2 cut(s)	406, 1315
SseBI	AGGCCT	1 cut(s)	428
SsiI	CCGC	6 cut(s)	120, 197, 208, 290, 493, 950
SspMI	CTAG	3 cut(s)	407, 1265, 1316
StuI	AGGCCT	1 cut(s)	428
StyD4I	CCNGG	5 cut(s)	88, 181, 297, 463, 1305
StyI	CCWWGG	2 cut(s)	429, 1155
TaaI	ACNGT	5 cut(s)	127, 224, 514, 556, 853
TaiI	ACGT	1 cut(s)	190
TaqI	TCGA	5 cut(s)	239, 885, 894, 1245, 1335
TauI	GCSGC	1 cut(s)	210
TfiI	GAWTC	8 cut(s)	53, 369, 401, 674, 857, 943, 986, 1062
Tru1I	TTAA	5 cut(s)	411, 420, 798, 1118, 1125
Tru9I	TTAA	5 cut(s)	411, 420, 798, 1118, 1125
TscAI	CASTG	2 cut(s)	561, 704
TseFI	GTSAC	1 cut(s)	508
TseI	GCWGC	6 cut(s)	155, 326, 560, 1172, 1214, 1376
Tsp45I	GTSAC	1 cut(s)	508
TspDTI	ATGAA	8 cut(s)	414, 429, 459, 935, 978, 1104, 1236, 1263
TspRI	CASTG	2 cut(s)	561, 704
Tth111I	GACNNNGTC	1 cut(s)	748
Van91I	CCANNNNNTGG	1 cut(s)	1050
VneI	GTGCAC	1 cut(s)	723
VpaK11BI	GGWCC	1 cut(s)	224
XapI	RAATTY	2 cut(s)	305, 660
XbaI	TCTAGA	1 cut(s)	1264
XceI	RCATGY	1 cut(s)	1296
XcmI	CCANNNNNNNNNTGG	1 cut(s)	46
XhoI	CTCGAG	1 cut(s)	1334
XmiI	GTMKAC	1 cut(s)	703
XmnI	GAANNNNTTC	1 cut(s)	368
XspI	CTAG	3 cut(s)	407, 1265, 1316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.