Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0008471

Physical Location & Seq

Genomic Coordinates Reverse (-)

27313967 .. 27318565

Gene Structure 4599 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1180500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1422 bp

ATGGCTCTCAATTTGTTATCTCCAGCTGAAATCAAAGCCATCTCTTTCTTGGATTCCGCCAAGTCCAGCTGCCACCTCCCCAAGCTTCCAGGGGGGTTTGCTTTGAGGAGGAGAGATTGCGGAACTGTAATTGGGAGAAGAGTTCAATGCTCAGCTGCACAGACACCTCCTCCAGCTTGGCCTGGACGTGCTGCGGTGGAGACAAGCCGCAGGACTTGGGACGGTCCCAAGCCTATTTCGATCGTTGGATCTACCGGTTCCATTGGAACCCAGACATTAGACATAGTGGCGGAGAACCCAGATAAATTCAGAATTGTGGCGCTGGCAGCTGGTTCAAATGTAACTCTTCTTGTGGATCAGGTGAGGAGATTCAAGCCCCAACTTGTTGCTGTTAGAAATGAGTCATTAGTTAATGAACTTAAAGAGGCCTTGGCTGATTTAGATGAAAAGCCCGAGATTATTCCGGGCGAGCAAGGAGTTGTTGAGGTTGCCCGCCACCCAGATGCAGTCACAGTAGTTACAGGAATTGTAGGCTGTGCAGGACTGAAGCCTACAGTGGCTGCAATAGAAGCAGGGAAAGACATAGCGTTAGCCAATAAAGAGACCCTGATTGCTGGAGGTCCTTTCGTTCTTCCTCTTGCTCACAAGCATAATGTGAAAATTCTTCCTGCTGATTCAGAACATTCTGCGATTTTTCAGTGTATCCAAGGCTTGCCAGAGGGTGCACTTCGGCGTATCATTTTGACAGCGTCTGGTGGGTCTTTCAGGGATTGGCCTGTTGAGAAGTTGAAAGAAGTTAAAGTTGCTGATGCTCTGAAGCATCCAAACTGGAATATGGGAAAGAAGATTACTGTTGATTCTGCGACTCTTTTCAATAAGGGTCTCGAAGTCATTGAAGCTCATTACTTGTTTGGAGCCGAATATGATGATATCGAGATTGTGATTCATCCGCAGTCCATTATACATTCAATGATTGAAACACAGGATTCATCTGTTCTGGCACAACTGGGATGGCCTGATATGCGCTTGCCAATCCTCTACACCATGTCATGGCCAGAGAGAATCTACTGCTCTGAAGTAACATGGCCTCGTCTTGATCTGTGCAAGCTAGGTTCATTAACCTTTAAAGCTCCTGACAATGTGAAATACCCATCCATGGACCTTGCCTATGCTGCTGGACGGGCCGGTGGCACCATGACTGGAGTTCTTAGTGCGGCAAATGAAAAGGCTGTGGAGATGTTTATCAGTGAAAAAATCAGTTATCTTGATATTTTCAAGATTGTTGAGCTAACATGTGCTAAGCATCGGGCAGAACTAGTGGCCTCGCCTTCCCTCGAGGAAATCATACATTACGATTTATGGGCACGAGATTATGCAGCCGATTTGCAAAGCTCTGGAAGCTCAATTCCTGTTTTTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0006081 GO:0006082 GO:0006090 GO:0006629 GO:0006644 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0008654 GO:0009058 GO:0009240 GO:0009987 GO:0016114 GO:0016491 GO:0016614 GO:0016616 GO:0019288 GO:0019637 GO:0019682 GO:0019752 GO:0030145 GO:0030604 GO:0032787 GO:0036094 GO:0043167 GO:0043168 GO:0043169 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0046490 GO:0046872 GO:0046914 GO:0048037 GO:0050661 GO:0050662 GO:0051483 GO:0051484 GO:0055114 GO:0070402 GO:0071704 GO:0090407 GO:0097159 GO:1901135 GO:1901265 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 map00900 map01100 map01110 map01130

Pfam Domains

Protein Families

DXPR_C DXP_redisom_C DXP_reductoisom

Protein Analysis

474

Amino Acids

51.29

Weight (kDa)

6.04

Isoelectric Point (pI)

42.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DXP_reductoisom	PF02670	79 - 207	3.8e-48	1-deoxy-D-xylulose 5-phosphate reductoisomerase
DXP_redisom_C	PF08436	221 - 304	1.4e-38	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
DXPR_C	PF13288	336 - 457	1.7e-36	DXP reductoisomerase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008471)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62790 AT5G62790
fragaria_vesca	FvH4_1g09716 FvH4_1g09717 FvH4_3g27741 FvH4_4g01210 FvH4_5g05300 FvH4_5g38682
malus_domestica	MD06G1174000.v1.1 MD14G1180500.v1.1
prunus_persica	Prupe.5G174000_v2.0.a1
pyrus_communis	pycom06g15530 pycom14g15050
rosa_chinensis	RchiOBHm_Chr7g0193571
rosa_laevigata	RLG00000004262
rosa_multiflora	Rmu_ssc0000035.1_g000001
rosa_roxburghii	Rroxscaffold_3G00262000
rosa_rugosa	Rorug07G0010200
rosa_samantha	Rh7AG137100 Rh7BG137400 Rh7CG140700 Rh7DG138500
rosa_wichuraiana	Rw7G011680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1334
AccB1I	GGYRCC	1 cut(s)	1190
AccB7I	CCANNNNNTGG	1 cut(s)	1050
AciI	CCGC	8 cut(s)	57, 120, 194, 208, 290, 493, 950, 1214
AclWI	GGATC	2 cut(s)	256, 363
AcoI	YGGCCR	1 cut(s)	1052
AcsI	RAATTY	2 cut(s)	305, 660
AcuI	CTGAAG	3 cut(s)	566, 836, 1095
AfiI	CCNNNNNNNGG	2 cut(s)	1050, 1156
AflIII	ACRYGT	1 cut(s)	1292
AgeI	ACCGGT	1 cut(s)	254
AgsI	TTSAA	9 cut(s)	146, 336, 373, 790, 874, 896, 969, 977, 1276
AhlI	ACTAGT	1 cut(s)	1315
AjiI	CACGTC	1 cut(s)	188
AjnI	CCWGG	2 cut(s)	88, 181
Alw21I	GWGCWC	1 cut(s)	727
Alw26I	GTCTC	3 cut(s)	194, 596, 887
Alw44I	GTGCAC	1 cut(s)	723
AlwI	GGATC	2 cut(s)	256, 363
AlwNI	CAGNNNCTG	2 cut(s)	560, 752
Ama87I	CYCGRG	2 cut(s)	452, 1334
AoxI	GGCC	8 cut(s)	179, 426, 773, 1013, 1052, 1085, 1182, 1320
ApaLI	GTGCAC	1 cut(s)	723
ApeKI	GCWGC	7 cut(s)	69, 155, 191, 326, 560, 1172, 1376
ApoI	RAATTY	2 cut(s)	305, 660
AsiGI	ACCGGT	1 cut(s)	254
AspLEI	GCGC	2 cut(s)	322, 1026
AspS9I	GGNCC	4 cut(s)	224, 620, 1159, 1182
AsuC2I	CCSGG	1 cut(s)	465
AsuHPI	GGTGA	1 cut(s)	373
AvaI	CYCGRG	2 cut(s)	452, 1334
AvaII	GGWCC	3 cut(s)	224, 620, 1159
BaeGI	GKGCMC	2 cut(s)	727, 1366
BalI	TGGCCA	1 cut(s)	1054
BanI	GGYRCC	1 cut(s)	1190
BauI	CACGAG	1 cut(s)	1365
Bbv12I	GWGCWC	1 cut(s)	727
BbvI	GCAGC	7 cut(s)	56, 142, 178, 338, 547, 1159, 1388
BccI	CCATC	3 cut(s)	47, 1005, 1159
BciT130I	CCWGG	2 cut(s)	90, 183
BciVI	GTATCC	1 cut(s)	713
BcnI	CCSGG	1 cut(s)	465
BcoDI	GTCTC	3 cut(s)	194, 596, 887
BcuI	ACTAGT	1 cut(s)	1315
BfaI	CTAG	2 cut(s)	1109, 1316
BfmI	CTRYAG	1 cut(s)	552
BfoI	RGCGCY	1 cut(s)	323
BfuI	GTATCC	1 cut(s)	713
BisI	GCNGC	9 cut(s)	70, 156, 192, 208, 327, 561, 1173, 1215, 1377
BlpI	GCTNAGC	2 cut(s)	151, 1299
BlsI	GCNGC	9 cut(s)	71, 157, 193, 209, 328, 562, 1174, 1216, 1378
Bme1390I	CCNGG	3 cut(s)	90, 183, 465
Bme18I	GGWCC	3 cut(s)	224, 620, 1159
BmeT110I	CYCGRG	2 cut(s)	452, 1334
BmgBI	CACGTC	1 cut(s)	188
BmgT120I	GGNCC	4 cut(s)	224, 620, 1159, 1182
BmiI	GGNNCC	5 cut(s)	226, 259, 268, 916, 1192
BmrFI	CCNGG	3 cut(s)	90, 183, 465
BmrI	ACTGGG	1 cut(s)	1016
BmsI	GCATC	4 cut(s)	493, 799, 829, 1312
BmuI	ACTGGG	1 cut(s)	1016
BpmI	CTGGAG	4 cut(s)	6, 156, 636, 1221
Bpu1102I	GCTNAGC	2 cut(s)	151, 1299
BpuMI	CCSGG	1 cut(s)	465
BsaBI	GATNNNNATC	1 cut(s)	1241
BsaI	GGTCTC	2 cut(s)	596, 887
BsaJI	CCNNGG	4 cut(s)	89, 429, 706, 1155
BsaWI	WCCGGW	1 cut(s)	254
BsaXI	ACNNNNNCTCC	2 cut(s)	154, 184
Bsc4I	CCNNNNNNNGG	2 cut(s)	1050, 1156
Bse118I	RCCGGY	2 cut(s)	254, 1184
Bse1I	ACTGG	3 cut(s)	833, 1011, 1204
Bse8I	GATNNNNATC	1 cut(s)	1241
BseBI	CCWGG	2 cut(s)	90, 183
BseDI	CCNNGG	4 cut(s)	89, 429, 706, 1155
BseGI	GGATG	4 cut(s)	820, 946, 1016, 1151
BseJI	GATNNNNATC	1 cut(s)	1241
BseLI	CCNNNNNNNGG	2 cut(s)	1050, 1156
BseMII	CTCAG	1 cut(s)	165
BseNI	ACTGG	3 cut(s)	833, 1011, 1204
BseRI	GAGGAG	4 cut(s)	121, 124, 159, 379
BseSI	GKGCMC	2 cut(s)	727, 1366
BseXI	GCAGC	7 cut(s)	56, 142, 178, 338, 547, 1159, 1388
BsgI	GTGCAG	2 cut(s)	141, 558
Bsh1285I	CGRYCG	1 cut(s)	243
BshFI	GGCC	8 cut(s)	181, 428, 775, 1015, 1054, 1087, 1184, 1322
BshNI	GGYRCC	1 cut(s)	1190
BshTI	ACCGGT	1 cut(s)	254
BsiEI	CGRYCG	1 cut(s)	243
BsiHKAI	GWGCWC	1 cut(s)	727
BsiHKCI	CYCGRG	2 cut(s)	452, 1334
BsiSI	CCGG	3 cut(s)	255, 464, 1185
BslFI	GGGAC	2 cut(s)	210, 233
BslI	CCNNNNNNNGG	2 cut(s)	1050, 1156
BsmAI	GTCTC	3 cut(s)	194, 596, 887
BsmFI	GGGAC	2 cut(s)	210, 233
BsnI	GGCC	8 cut(s)	181, 428, 775, 1015, 1054, 1087, 1184, 1322
Bso31I	GGTCTC	2 cut(s)	596, 887
BsoBI	CYCGRG	2 cut(s)	452, 1334
Bsp1286I	GDGCHC	2 cut(s)	727, 1366
Bsp143I	GATC	4 cut(s)	240, 248, 355, 1096
Bsp1720I	GCTNAGC	2 cut(s)	151, 1299
Bsp19I	CCATGG	1 cut(s)	1155
BspACI	CCGC	8 cut(s)	57, 120, 194, 208, 290, 493, 950, 1214
BspANI	GGCC	8 cut(s)	181, 428, 775, 1015, 1054, 1087, 1184, 1322
BspCNI	CTCAG	1 cut(s)	164
BspLI	GGNNCC	5 cut(s)	226, 259, 268, 916, 1192
BspPI	GGATC	2 cut(s)	256, 363
BspT107I	GGYRCC	1 cut(s)	1190
BspTNI	GGTCTC	2 cut(s)	596, 887
BsrFI	RCCGGY	2 cut(s)	254, 1184
BsrI	ACTGG	3 cut(s)	833, 1011, 1204
BssAI	RCCGGY	2 cut(s)	254, 1184
BssECI	CCNNGG	4 cut(s)	89, 429, 706, 1155
BssMI	GATC	4 cut(s)	240, 248, 355, 1096
BssSI	CACGAG	1 cut(s)	1365
BssT1I	CCWWGG	3 cut(s)	429, 706, 1155
Bst2BI	CACGAG	1 cut(s)	1365
Bst2UI	CCWGG	2 cut(s)	90, 183
Bst4CI	ACNGT	5 cut(s)	127, 224, 514, 556, 853
Bst6I	CTCTTC	2 cut(s)	133, 351
BstC8I	GCNNGC	6 cut(s)	324, 470, 493, 713, 1028, 1106
BstDEI	CTNAG	3 cut(s)	151, 1208, 1299
BstDSI	CCRYGG	1 cut(s)	1155
BstF5I	GGATG	4 cut(s)	820, 946, 1016, 1151
BstH2I	RGCGCY	1 cut(s)	323
BstHHI	GCGC	2 cut(s)	322, 1026
BstKTI	GATC	4 cut(s)	243, 251, 358, 1099
BstMAI	GTCTC	3 cut(s)	194, 596, 887
BstMBI	GATC	4 cut(s)	240, 248, 355, 1096
BstMCI	CGRYCG	1 cut(s)	243
BstMWI	GCNNNNNNNGC	6 cut(s)	326, 569, 1021, 1172, 1181, 1398
BstNI	CCWGG	2 cut(s)	90, 183
BstNSI	RCATGY	1 cut(s)	1296
BstSCI	CCNGG	3 cut(s)	88, 181, 463
BstSFI	CTRYAG	1 cut(s)	552
BstSLI	GKGCMC	2 cut(s)	727, 1366
BstV1I	GCAGC	7 cut(s)	56, 142, 178, 338, 547, 1159, 1388
BstX2I	RGATCY	1 cut(s)	248
BstYI	RGATCY	1 cut(s)	248
BsuI	GTATCC	1 cut(s)	713
BsuRI	GGCC	8 cut(s)	181, 428, 775, 1015, 1054, 1087, 1184, 1322
BtgI	CCRYGG	1 cut(s)	1155
BtrI	CACGTC	1 cut(s)	188
BtsCI	GGATG	4 cut(s)	820, 946, 1016, 1151
BtsIMutI	CAGTG	3 cut(s)	561, 704, 1252
Cac8I	GCNNGC	6 cut(s)	324, 470, 493, 713, 1028, 1106
CaiI	CAGNNNCTG	2 cut(s)	560, 752
CfoI	GCGC	2 cut(s)	322, 1026
Cfr10I	RCCGGY	2 cut(s)	254, 1184
Cfr13I	GGNCC	4 cut(s)	224, 620, 1159, 1182
CseI	GACGC	1 cut(s)	738
CspAI	ACCGGT	1 cut(s)	254
CviAII	CATG	7 cut(s)	1045, 1050, 1083, 1156, 1195, 1293, 1419
DdeI	CTNAG	3 cut(s)	151, 1208, 1299
DpnI	GATC	4 cut(s)	242, 250, 357, 1098
DpnII	GATC	4 cut(s)	240, 248, 355, 1096
DraI	TTTAAA	1 cut(s)	1126
EaeI	YGGCCR	1 cut(s)	1052
Eam1104I	CTCTTC	2 cut(s)	133, 351
EarI	CTCTTC	2 cut(s)	133, 351
EciI	GGCGGA	2 cut(s)	46, 305
Eco130I	CCWWGG	3 cut(s)	429, 706, 1155
Eco147I	AGGCCT	1 cut(s)	428
Eco31I	GGTCTC	2 cut(s)	596, 887
Eco32I	GATATC	1 cut(s)	931
Eco47I	GGWCC	3 cut(s)	224, 620, 1159
Eco57I	CTGAAG	3 cut(s)	566, 836, 1095
Eco88I	CYCGRG	2 cut(s)	452, 1334
EcoO109I	RGGNCCY	1 cut(s)	620
EcoRII	CCWGG	2 cut(s)	88, 181
EcoRV	GATATC	1 cut(s)	931
EcoT14I	CCWWGG	3 cut(s)	429, 706, 1155
ErhI	CCWWGG	3 cut(s)	429, 706, 1155
FaeI	CATG	7 cut(s)	1048, 1053, 1086, 1159, 1198, 1296, 1422
FaqI	GGGAC	2 cut(s)	210, 233
FatI	CATG	7 cut(s)	1044, 1049, 1082, 1155, 1194, 1292, 1418
FauI	CCCGC	1 cut(s)	500
Fnu4HI	GCNGC	9 cut(s)	70, 156, 192, 208, 327, 561, 1173, 1215, 1377
FokI	GGATG	4 cut(s)	807, 933, 1023, 1138
Fsp4HI	GCNGC	9 cut(s)	70, 156, 192, 208, 327, 561, 1173, 1215, 1377
FspBI	CTAG	2 cut(s)	1109, 1316
GlaI	GCGC	2 cut(s)	321, 1025
GluI	GCNGC	9 cut(s)	70, 156, 192, 208, 327, 561, 1173, 1215, 1377
GsuI	CTGGAG	4 cut(s)	6, 156, 636, 1221
HaeII	RGCGCY	1 cut(s)	323
HaeIII	GGCC	8 cut(s)	181, 428, 775, 1015, 1054, 1087, 1184, 1322
HapII	CCGG	3 cut(s)	255, 464, 1185
HgaI	GACGC	1 cut(s)	738
HhaI	GCGC	2 cut(s)	322, 1026
Hin1II	CATG	7 cut(s)	1048, 1053, 1086, 1159, 1198, 1296, 1422
Hin6I	GCGC	2 cut(s)	320, 1024
HinP1I	GCGC	2 cut(s)	320, 1024
HindIII	AAGCTT	1 cut(s)	83
HinfI	GANTC	9 cut(s)	53, 369, 401, 674, 857, 865, 943, 986, 1062
HpaII	CCGG	3 cut(s)	255, 464, 1185
HphI	GGTGA	1 cut(s)	373
Hpy166II	GTNNAC	1 cut(s)	725
Hpy188I	TCNGA	4 cut(s)	311, 679, 816, 1075
Hpy188III	TCNNGA	7 cut(s)	884, 934, 1094, 1133, 1265, 1276, 1395
Hpy8I	GTNNAC	1 cut(s)	725
HpyAV	CCTTC	1 cut(s)	1338
HpyCH4III	ACNGT	5 cut(s)	127, 224, 514, 556, 853
HpyCH4IV	ACGT	1 cut(s)	187
HpyCH4V	TGCA	9 cut(s)	158, 506, 539, 563, 725, 1104, 1376, 1387, 1418
HpyF10VI	GCNNNNNNNGC	6 cut(s)	326, 569, 1021, 1172, 1181, 1398
HpyF3I	CTNAG	3 cut(s)	151, 1208, 1299
HpySE526I	ACGT	1 cut(s)	187
Hsp92II	CATG	7 cut(s)	1048, 1053, 1086, 1159, 1198, 1296, 1422
HspAI	GCGC	2 cut(s)	320, 1024
Kzo9I	GATC	4 cut(s)	240, 248, 355, 1096
LmnI	GCTCC	2 cut(s)	914, 1135
Lsp1109I	GCAGC	7 cut(s)	56, 142, 178, 338, 547, 1159, 1388
LweI	GCATC	4 cut(s)	493, 799, 829, 1312
MaeI	CTAG	2 cut(s)	1109, 1316
MaeII	ACGT	1 cut(s)	187
MaeIII	GTNAC	4 cut(s)	340, 508, 517, 1078
MalI	GATC	4 cut(s)	242, 250, 357, 1098
MboI	GATC	4 cut(s)	240, 248, 355, 1096
MboII	GAAGA	5 cut(s)	150, 338, 623, 656, 856
MflI	RGATCY	1 cut(s)	248
MhlI	GDGCHC	2 cut(s)	727, 1366
MlsI	TGGCCA	1 cut(s)	1054
MluCI	AATT	7 cut(s)	10, 129, 305, 312, 525, 660, 1404
MluNI	TGGCCA	1 cut(s)	1054
MlyI	GAGTC	2 cut(s)	410, 859
MmeI	TCCRAC	1 cut(s)	226
Mox20I	TGGCCA	1 cut(s)	1054
MscI	TGGCCA	1 cut(s)	1054
MseI	TTAA	5 cut(s)	411, 420, 798, 1118, 1125
MslI	CAYNNNNRTG	1 cut(s)	501
Msp20I	TGGCCA	1 cut(s)	1054
MspA1I	CMGCKG	4 cut(s)	26, 69, 155, 329
MspI	CCGG	3 cut(s)	255, 464, 1185
MspR9I	CCNGG	3 cut(s)	90, 183, 465
MvaI	CCWGG	2 cut(s)	90, 183
MwoI	GCNNNNNNNGC	6 cut(s)	326, 569, 1021, 1172, 1181, 1398
NciI	CCSGG	1 cut(s)	465
NcoI	CCATGG	1 cut(s)	1155
NdeII	GATC	4 cut(s)	240, 248, 355, 1096
NlaIII	CATG	7 cut(s)	1048, 1053, 1086, 1159, 1198, 1296, 1422
NlaIV	GGNNCC	5 cut(s)	226, 259, 268, 916, 1192
NmuCI	GTSAC	1 cut(s)	508
NspI	RCATGY	1 cut(s)	1296
PaeR7I	CTCGAG	1 cut(s)	1334
PceI	AGGCCT	1 cut(s)	428
PciI	ACATGT	1 cut(s)	1292
PfeI	GAWTC	7 cut(s)	53, 369, 674, 857, 943, 986, 1062
PflFI	GACNNNGTC	1 cut(s)	748
PflMI	CCANNNNNTGG	1 cut(s)	1050
PinAI	ACCGGT	1 cut(s)	254
PkrI	GCNGC	9 cut(s)	71, 157, 193, 209, 328, 562, 1174, 1216, 1378
Ple19I	CGATCG	1 cut(s)	243
PleI	GAGTC	2 cut(s)	409, 859
PpsI	GAGTC	2 cut(s)	409, 859
PpuMI	RGGWCCY	1 cut(s)	620
PscI	ACATGT	1 cut(s)	1292
Psp5II	RGGWCCY	1 cut(s)	620
Psp6I	CCWGG	2 cut(s)	88, 181
PspGI	CCWGG	2 cut(s)	88, 181
PspN4I	GGNNCC	5 cut(s)	226, 259, 268, 916, 1192
PspPI	GGNCC	4 cut(s)	224, 620, 1159, 1182
PspPPI	RGGWCCY	1 cut(s)	620
PspXI	VCTCGAGB	1 cut(s)	1334
PstNI	CAGNNNCTG	2 cut(s)	560, 752
PsuI	RGATCY	1 cut(s)	248
PsyI	GACNNNGTC	1 cut(s)	748
PvuI	CGATCG	1 cut(s)	243
PvuII	CAGCTG	4 cut(s)	26, 69, 155, 329
RseI	CAYNNNNRTG	1 cut(s)	501
SaqAI	TTAA	5 cut(s)	411, 420, 798, 1118, 1125
SatI	GCNGC	9 cut(s)	70, 156, 192, 208, 327, 561, 1173, 1215, 1377
Sau3AI	GATC	4 cut(s)	240, 248, 355, 1096
Sau96I	GGNCC	4 cut(s)	224, 620, 1159, 1182
SchI	GAGTC	2 cut(s)	410, 859
ScrFI	CCNGG	3 cut(s)	90, 183, 465
SduI	GDGCHC	2 cut(s)	727, 1366
SfaNI	GCATC	4 cut(s)	493, 799, 829, 1312
SfcI	CTRYAG	1 cut(s)	552
Sfr274I	CTCGAG	1 cut(s)	1334
SinI	GGWCC	3 cut(s)	224, 620, 1159
SlaI	CTCGAG	1 cut(s)	1334
SmiMI	CAYNNNNRTG	1 cut(s)	501
SmlI	CTYRAG	1 cut(s)	1334
SmoI	CTYRAG	1 cut(s)	1334
SpeI	ACTAGT	1 cut(s)	1315
Sse9I	AATT	7 cut(s)	10, 129, 305, 312, 525, 660, 1404
SseBI	AGGCCT	1 cut(s)	428
SsiI	CCGC	8 cut(s)	57, 120, 194, 208, 290, 493, 950, 1214
SspMI	CTAG	2 cut(s)	1109, 1316
StuI	AGGCCT	1 cut(s)	428
StyD4I	CCNGG	3 cut(s)	88, 181, 463
StyI	CCWWGG	3 cut(s)	429, 706, 1155
TaaI	ACNGT	5 cut(s)	127, 224, 514, 556, 853
TaiI	ACGT	1 cut(s)	190
TaqI	TCGA	4 cut(s)	239, 885, 933, 1335
TasI	AATT	7 cut(s)	10, 129, 305, 312, 525, 660, 1404
TauI	GCSGC	2 cut(s)	210, 1217
TfiI	GAWTC	7 cut(s)	53, 369, 674, 857, 943, 986, 1062
Tru1I	TTAA	5 cut(s)	411, 420, 798, 1118, 1125
Tru9I	TTAA	5 cut(s)	411, 420, 798, 1118, 1125
TscAI	CASTG	3 cut(s)	561, 704, 1252
TseFI	GTSAC	1 cut(s)	508
TseI	GCWGC	7 cut(s)	69, 155, 191, 326, 560, 1172, 1376
Tsp45I	GTSAC	1 cut(s)	508
TspDTI	ATGAA	6 cut(s)	429, 459, 935, 978, 1104, 1236
TspRI	CASTG	3 cut(s)	561, 704, 1252
Tth111I	GACNNNGTC	1 cut(s)	748
Van91I	CCANNNNNTGG	1 cut(s)	1050
VneI	GTGCAC	1 cut(s)	723
VpaK11BI	GGWCC	3 cut(s)	224, 620, 1159
XapI	RAATTY	2 cut(s)	305, 660
XceI	RCATGY	1 cut(s)	1296
XcmI	CCANNNNNNNNNTGG	1 cut(s)	46
XhoI	CTCGAG	1 cut(s)	1334
XspI	CTAG	2 cut(s)	1109, 1316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.