Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0008471

Physical Location & Seq

Genomic Coordinates Forward (+)

57797588 .. 57801319

Gene Structure 3732 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004262

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGGCTCTGAATCTGTTGTCTCCAGCTGAAATTAAAGCCATCTCTTTCTTGGATTCCACCAAGTCCACTCACTTGCCAAAGCTTCCAGGTGGGTTTGCTTTGAGGAGGAGAGATTGCAGAACGGTGATTGGAAGAAGAATTCAGTGTTCAGCACAAGCACCACCTCCAGCTTGGCCGGGAAGTGCTTTTCCGGAGCCCGGCCGGAGGACTTGGGATGGTCCAAAGCCTATTTCTGTTGTTGGATCTACTGGTTCCATTGGAACCCAGACATTGGACATAGTTGCAGAGAACCCCGAAAAATTCAGAGTTGTGGCCCTAGCAGCTGGCTCAAATGTGACTCTTCTTGTCGATCAGGTGAAGAGGTTCAAACCCAAACTAGTTGCAGTTAGAAATGAATCATTAGTTAATGAACTTAAAGAGGCTCTATCTGGTCTAGAAGACAAGCCTGAGATCATTCCTGGGGAGCAAGGAGTCATCGAGGTTGCTCGGCACCCAGATGCAGTCACAGTAGTTACAGGAATAGTTGGTTGTGCAGGACTGAAGCCTACGGTGGCTGCAATAGAAGCAGGGAAAGACATAGCTTTAGCCAATAAGGAGACCCTGATTGCTGGAGGCCCATTTGTTCTTCCTCTTGCACACAAGCATAATGTGAAAATTCTTCCTGCTGATTCAGAACATTCTGCAATTTTTCAGTGTATCCAAGGCTTGCCAGAGGGTGCACTTCGGCGTATCATTTTGACAGCTTCTGGTGGGGCTTTCAGGGATTGGCCTGTTGAAAAACTCAAAGAAGTTAAGGTTGCTGATGCTCTGAAACATCCTAACTGGAGTATGGGAAAGAAGATAACTGTTGATTCAGCTACGCTTTTCAATAAGGGGCTAGAAGTCATTGAAGCCCATTACTTGTATGGAGCTGAGTATGATGATATCGAGATTGTGATTCATCCACAATCCATCATCCATTCGATGATTGAAACTCAGGATTCATCTGTTCTAGCACAGTTGGGGTGGCCTGATATGCGCTTGCCAATCCTCTACACCATGTCATGGCCAGAGAGAATCTATTGCTCTGAAGTAACCTGGCCCCGGCTTGATCTTTGCAAGCTTGGTTCACTAACCTTTAAAGCTCCTGACAACGTGAAATACCCATCCATGGATCTTGCCTATTCTGCTGGACGGGCCGGTGGCACCATGACAGGAGTTCTTAGTGCAGCAAATGAAAAGGCCGTGGAGATGTTTATCGATGAAAAAATTAGATATCTGGATATTTTCAAGGTTGTTGAGCTAACATGTGCCAAGCACAGGGCAGAACTCGTGACCTCACCTTCCCTCGAGGAAATTGTACATTATGATTTATGGGCAAGAGATTACGCTGCTAATCTGCAAAGCTCAACAAGTTCAACCCCTGTATTCGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0006081 GO:0006082 GO:0006090 GO:0006629 GO:0006644 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0008654 GO:0009058 GO:0009240 GO:0009987 GO:0016114 GO:0016491 GO:0016614 GO:0016616 GO:0019288 GO:0019637 GO:0019682 GO:0019752 GO:0030145 GO:0030604 GO:0032787 GO:0036094 GO:0043167 GO:0043168 GO:0043169 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0046490 GO:0046872 GO:0046914 GO:0048037 GO:0050661 GO:0050662 GO:0051483 GO:0051484 GO:0055114 GO:0070402 GO:0071704 GO:0090407 GO:0097159 GO:1901135 GO:1901265 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 map00900 map01100 map01110 map01130

Pfam Domains

Protein Families

DXPR_C DXP_redisom_C DXP_reductoisom

Protein Analysis

472

Amino Acids

51.27

Weight (kDa)

6.44

Isoelectric Point (pI)

42.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DXP_reductoisom	PF02670	77 - 205	1.6e-47	1-deoxy-D-xylulose 5-phosphate reductoisomerase
DXP_redisom_C	PF08436	219 - 302	2.6e-38	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
DXPR_C	PF13288	334 - 455	1.3e-36	DXP reductoisomerase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008471)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62790 AT5G62790
fragaria_vesca	FvH4_1g09716 FvH4_1g09717 FvH4_3g27741 FvH4_4g01210 FvH4_5g05300 FvH4_5g38682
malus_domestica	MD06G1174000.v1.1 MD14G1180500.v1.1
prunus_persica	Prupe.5G174000_v2.0.a1
pyrus_communis	pycom06g15530 pycom14g15050
rosa_chinensis	RchiOBHm_Chr7g0193571
rosa_laevigata	RLG00000004262
rosa_multiflora	Rmu_ssc0000035.1_g000001
rosa_roxburghii	Rroxscaffold_3G00262000
rosa_rugosa	Rorug07G0010200
rosa_samantha	Rh7AG137100 Rh7BG137400 Rh7CG140700 Rh7DG138500
rosa_wichuraiana	Rw7G011680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1328
AccB1I	GGYRCC	2 cut(s)	489, 1184
AccB7I	CCANNNNNTGG	2 cut(s)	271, 1044
AccIII	TCCGGA	1 cut(s)	190
AclWI	GGATC	2 cut(s)	250, 1161
AcoI	YGGCCR	3 cut(s)	173, 199, 1046
AcsI	RAATTY	3 cut(s)	138, 299, 654
AcuI	CTGAAG	2 cut(s)	560, 1089
AfaI	GTAC	1 cut(s)	1341
AfiI	CCNNNNNNNGG	7 cut(s)	197, 204, 271, 1044, 1083, 1150, 1299
AflIII	ACRYGT	1 cut(s)	1286
AgsI	TTSAA	7 cut(s)	367, 776, 868, 890, 971, 1270, 1398
AhlI	ACTAGT	1 cut(s)	376
AjnI	CCWGG	3 cut(s)	85, 457, 1076
AjuI	GAANNNNNNNTTGG	2 cut(s)	214, 246
Alw21I	GWGCWC	1 cut(s)	721
Alw26I	GTCTC	2 cut(s)	24, 590
Alw44I	GTGCAC	1 cut(s)	717
AlwI	GGATC	2 cut(s)	250, 1161
AlwNI	CAGNNNCTG	1 cut(s)	746
Ama87I	CYCGRG	1 cut(s)	1328
Aor13HI	TCCGGA	1 cut(s)	190
ApaLI	GTGCAC	1 cut(s)	717
ApeKI	GCWGC	4 cut(s)	320, 554, 1208, 1370
ApoI	RAATTY	3 cut(s)	138, 299, 654
Asp700I	GAANNNNTTC	1 cut(s)	362
AspLEI	GCGC	1 cut(s)	1020
AspS9I	GGNCC	5 cut(s)	218, 313, 614, 1080, 1176
AsuC2I	CCSGG	3 cut(s)	177, 198, 1084
AsuHPI	GGTGA	3 cut(s)	136, 367, 1311
AvaI	CYCGRG	1 cut(s)	1328
AvaII	GGWCC	1 cut(s)	218
BaeGI	GKGCMC	1 cut(s)	721
BalI	TGGCCA	1 cut(s)	1048
BanI	GGYRCC	2 cut(s)	489, 1184
BanII	GRGCYC	1 cut(s)	198
BauI	CACGAG	1 cut(s)	1310
BbsI	GAAGAC	1 cut(s)	444
Bbv12I	GWGCWC	1 cut(s)	721
BbvI	GCAGC	4 cut(s)	332, 541, 1220, 1357
BccI	CCATC	4 cut(s)	47, 209, 959, 1153
BceAI	ACGGC	1 cut(s)	1208
BciT130I	CCWGG	3 cut(s)	87, 459, 1078
BciVI	GTATCC	1 cut(s)	707
BcnI	CCSGG	3 cut(s)	177, 198, 1084
BcoDI	GTCTC	2 cut(s)	24, 590
BcuI	ACTAGT	1 cut(s)	376
BfaI	CTAG	5 cut(s)	317, 377, 434, 878, 992
BfuI	GTATCC	1 cut(s)	707
BisI	GCNGC	4 cut(s)	321, 555, 1209, 1371
BlsI	GCNGC	4 cut(s)	322, 556, 1210, 1372
Bme1390I	CCNGG	6 cut(s)	87, 177, 198, 459, 1078, 1084
Bme18I	GGWCC	1 cut(s)	218
BmeT110I	CYCGRG	1 cut(s)	1328
BmgT120I	GGNCC	5 cut(s)	218, 313, 614, 1080, 1176
BmiI	GGNNCC	6 cut(s)	195, 253, 262, 491, 1082, 1186
BmrFI	CCNGG	6 cut(s)	87, 177, 198, 459, 1078, 1084
BmsI	GCATC	2 cut(s)	487, 793
BpiI	GAAGAC	1 cut(s)	444
BpmI	CTGGAG	4 cut(s)	6, 150, 630, 844
BpuMI	CCSGG	3 cut(s)	177, 198, 1084
Bsa29I	ATCGAT	1 cut(s)	1239
BsaBI	GATNNNNATC	1 cut(s)	1235
BsaI	GGTCTC	1 cut(s)	590
BsaJI	CCNNGG	5 cut(s)	458, 700, 1082, 1149, 1224
BsaWI	WCCGGW	1 cut(s)	190
Bsc4I	CCNNNNNNNGG	7 cut(s)	197, 204, 271, 1044, 1083, 1150, 1299
Bse118I	RCCGGY	1 cut(s)	1178
Bse1I	ACTGG	2 cut(s)	253, 827
Bse8I	GATNNNNATC	1 cut(s)	1235
BseAI	TCCGGA	1 cut(s)	190
BseBI	CCWGG	3 cut(s)	87, 459, 1078
BseCI	ATCGAT	1 cut(s)	1239
BseDI	CCNNGG	5 cut(s)	458, 700, 1082, 1149, 1224
BseGI	GGATG	5 cut(s)	220, 814, 940, 954, 1145
BseJI	GATNNNNATC	1 cut(s)	1235
BseLI	CCNNNNNNNGG	7 cut(s)	197, 204, 271, 1044, 1083, 1150, 1299
BseMII	CTCAG	3 cut(s)	438, 903, 989
BseNI	ACTGG	2 cut(s)	253, 827
BseRI	GAGGAG	2 cut(s)	118, 121
BseSI	GKGCMC	1 cut(s)	721
BseX3I	CGGCCG	1 cut(s)	199
BseXI	GCAGC	4 cut(s)	332, 541, 1220, 1357
BsgI	GTGCAG	2 cut(s)	552, 1227
Bsh1285I	CGRYCG	1 cut(s)	202
BshNI	GGYRCC	2 cut(s)	489, 1184
BshVI	ATCGAT	1 cut(s)	1239
BsiEI	CGRYCG	1 cut(s)	202
BsiHKAI	GWGCWC	1 cut(s)	721
BsiHKCI	CYCGRG	1 cut(s)	1328
BsiSI	CCGG	6 cut(s)	176, 191, 198, 202, 1084, 1179
BslI	CCNNNNNNNGG	7 cut(s)	197, 204, 271, 1044, 1083, 1150, 1299
BsmAI	GTCTC	2 cut(s)	24, 590
Bso31I	GGTCTC	1 cut(s)	590
BsoBI	CYCGRG	1 cut(s)	1328
Bsp1286I	GDGCHC	2 cut(s)	198, 721
Bsp13I	TCCGGA	1 cut(s)	190
Bsp1407I	TGTACA	1 cut(s)	1339
Bsp143I	GATC	5 cut(s)	242, 349, 450, 1090, 1153
Bsp19I	CCATGG	1 cut(s)	1149
BspCNI	CTCAG	3 cut(s)	439, 904, 988
BspDI	ATCGAT	1 cut(s)	1239
BspEI	TCCGGA	1 cut(s)	190
BspLI	GGNNCC	6 cut(s)	195, 253, 262, 491, 1082, 1186
BspPI	GGATC	2 cut(s)	250, 1161
BspT107I	GGYRCC	2 cut(s)	489, 1184
BspTNI	GGTCTC	1 cut(s)	590
BsrFI	RCCGGY	1 cut(s)	1178
BsrGI	TGTACA	1 cut(s)	1339
BsrI	ACTGG	2 cut(s)	253, 827
BssAI	RCCGGY	1 cut(s)	1178
BssECI	CCNNGG	5 cut(s)	458, 700, 1082, 1149, 1224
BssMI	GATC	5 cut(s)	242, 349, 450, 1090, 1153
BssSI	CACGAG	1 cut(s)	1310
BssT1I	CCWWGG	2 cut(s)	700, 1149
Bst2BI	CACGAG	1 cut(s)	1310
Bst2UI	CCWGG	3 cut(s)	87, 459, 1078
Bst4CI	ACNGT	5 cut(s)	124, 508, 550, 847, 999
Bst6I	CTCTTC	2 cut(s)	345, 353
BstAUI	TGTACA	1 cut(s)	1339
BstC8I	GCNNGC	4 cut(s)	325, 707, 1022, 1100
BstDEI	CTNAG	4 cut(s)	447, 912, 975, 1202
BstDSI	CCRYGG	2 cut(s)	1149, 1224
BstF5I	GGATG	5 cut(s)	220, 814, 940, 954, 1145
BstHHI	GCGC	1 cut(s)	1020
BstKTI	GATC	5 cut(s)	245, 352, 453, 1093, 1156
BstMAI	GTCTC	2 cut(s)	24, 590
BstMBI	GATC	5 cut(s)	242, 349, 450, 1090, 1153
BstMCI	CGRYCG	1 cut(s)	202
BstMWI	GCNNNNNNNGC	5 cut(s)	320, 563, 1015, 1166, 1175
BstNI	CCWGG	3 cut(s)	87, 459, 1078
BstNSI	RCATGY	1 cut(s)	1290
BstSCI	CCNGG	6 cut(s)	85, 175, 196, 457, 1076, 1082
BstSLI	GKGCMC	1 cut(s)	721
BstV1I	GCAGC	4 cut(s)	332, 541, 1220, 1357
BstV2I	GAAGAC	1 cut(s)	444
BstX2I	RGATCY	2 cut(s)	242, 1153
BstYI	RGATCY	2 cut(s)	242, 1153
BstZI	CGGCCG	1 cut(s)	199
Bsu15I	ATCGAT	1 cut(s)	1239
BsuI	GTATCC	1 cut(s)	707
BsuTUI	ATCGAT	1 cut(s)	1239
BtgI	CCRYGG	2 cut(s)	1149, 1224
BtsCI	GGATG	5 cut(s)	220, 814, 940, 954, 1145
BtsIMutI	CAGTG	2 cut(s)	149, 698
Cac8I	GCNNGC	4 cut(s)	325, 707, 1022, 1100
CaiI	CAGNNNCTG	1 cut(s)	746
CfoI	GCGC	1 cut(s)	1020
Cfr10I	RCCGGY	1 cut(s)	1178
Cfr13I	GGNCC	5 cut(s)	218, 313, 614, 1080, 1176
ClaI	ATCGAT	1 cut(s)	1239
Csp6I	GTAC	1 cut(s)	1340
CviAII	CATG	6 cut(s)	1039, 1044, 1150, 1189, 1287, 1413
CviQI	GTAC	1 cut(s)	1340
DdeI	CTNAG	4 cut(s)	447, 912, 975, 1202
DpnI	GATC	5 cut(s)	244, 351, 452, 1092, 1155
DpnII	GATC	5 cut(s)	242, 349, 450, 1090, 1153
DraI	TTTAAA	1 cut(s)	1120
EaeI	YGGCCR	3 cut(s)	173, 199, 1046
EagI	CGGCCG	1 cut(s)	199
Eam1104I	CTCTTC	2 cut(s)	345, 353
EarI	CTCTTC	2 cut(s)	345, 353
EclXI	CGGCCG	1 cut(s)	199
Eco130I	CCWWGG	2 cut(s)	700, 1149
Eco24I	GRGCYC	1 cut(s)	198
Eco31I	GGTCTC	1 cut(s)	590
Eco32I	GATATC	2 cut(s)	925, 1256
Eco47I	GGWCC	1 cut(s)	218
Eco52I	CGGCCG	1 cut(s)	199
Eco57I	CTGAAG	2 cut(s)	560, 1089
Eco88I	CYCGRG	1 cut(s)	1328
EcoRI	GAATTC	1 cut(s)	138
EcoRII	CCWGG	3 cut(s)	85, 457, 1076
EcoRV	GATATC	2 cut(s)	925, 1256
EcoT14I	CCWWGG	2 cut(s)	700, 1149
EcoT38I	GRGCYC	1 cut(s)	198
ErhI	CCWWGG	2 cut(s)	700, 1149
FaeI	CATG	6 cut(s)	1042, 1047, 1153, 1192, 1290, 1416
FatI	CATG	6 cut(s)	1038, 1043, 1149, 1188, 1286, 1412
Fnu4HI	GCNGC	4 cut(s)	321, 555, 1209, 1371
FokI	GGATG	5 cut(s)	227, 801, 927, 941, 1132
FriOI	GRGCYC	1 cut(s)	198
Fsp4HI	GCNGC	4 cut(s)	321, 555, 1209, 1371
FspBI	CTAG	5 cut(s)	317, 377, 434, 878, 992
GlaI	GCGC	1 cut(s)	1019
GluI	GCNGC	4 cut(s)	321, 555, 1209, 1371
GsuI	CTGGAG	4 cut(s)	6, 150, 630, 844
HapII	CCGG	6 cut(s)	176, 191, 198, 202, 1084, 1179
HhaI	GCGC	1 cut(s)	1020
Hin1II	CATG	6 cut(s)	1042, 1047, 1153, 1192, 1290, 1416
Hin6I	GCGC	1 cut(s)	1018
HinP1I	GCGC	1 cut(s)	1018
HindIII	AAGCTT	2 cut(s)	80, 1100
HpaII	CCGG	6 cut(s)	176, 191, 198, 202, 1084, 1179
HphI	GGTGA	3 cut(s)	136, 367, 1311
Hpy166II	GTNNAC	3 cut(s)	66, 719, 1109
Hpy188I	TCNGA	5 cut(s)	9, 305, 673, 810, 1069
Hpy188III	TCNNGA	7 cut(s)	191, 434, 928, 977, 1127, 1259, 1312
Hpy8I	GTNNAC	3 cut(s)	66, 719, 1109
HpyAV	CCTTC	1 cut(s)	1332
HpyCH4III	ACNGT	5 cut(s)	124, 508, 550, 847, 999
HpyCH4IV	ACGT	1 cut(s)	1134
HpyF10VI	GCNNNNNNNGC	5 cut(s)	320, 563, 1015, 1166, 1175
HpyF3I	CTNAG	4 cut(s)	447, 912, 975, 1202
HpySE526I	ACGT	1 cut(s)	1134
Hsp92II	CATG	6 cut(s)	1042, 1047, 1153, 1192, 1290, 1416
HspAI	GCGC	1 cut(s)	1018
Kpn2I	TCCGGA	1 cut(s)	190
Kzo9I	GATC	5 cut(s)	242, 349, 450, 1090, 1153
LmnI	GCTCC	4 cut(s)	193, 463, 908, 1129
Lsp1109I	GCAGC	4 cut(s)	332, 541, 1220, 1357
LweI	GCATC	2 cut(s)	487, 793
MaeI	CTAG	5 cut(s)	317, 377, 434, 878, 992
MaeII	ACGT	1 cut(s)	1134
MaeIII	GTNAC	5 cut(s)	334, 502, 511, 1072, 1312
MalI	GATC	5 cut(s)	244, 351, 452, 1092, 1155
MboI	GATC	5 cut(s)	242, 349, 450, 1090, 1153
MboII	GAAGA	8 cut(s)	144, 147, 332, 370, 449, 617, 650, 850
MflI	RGATCY	2 cut(s)	242, 1153
MhlI	GDGCHC	2 cut(s)	198, 721
MlsI	TGGCCA	1 cut(s)	1048
MluCI	AATT	7 cut(s)	30, 138, 299, 654, 684, 1248, 1335
MluNI	TGGCCA	1 cut(s)	1048
MlyI	GAGTC	2 cut(s)	331, 480
MmeI	TCCRAC	1 cut(s)	220
Mox20I	TGGCCA	1 cut(s)	1048
MroI	TCCGGA	1 cut(s)	190
MroXI	GAANNNNTTC	1 cut(s)	362
MscI	TGGCCA	1 cut(s)	1048
MseI	TTAA	5 cut(s)	33, 405, 414, 792, 1119
MslI	CAYNNNNRTG	1 cut(s)	495
Msp20I	TGGCCA	1 cut(s)	1048
MspA1I	CMGCKG	2 cut(s)	26, 323
MspI	CCGG	6 cut(s)	176, 191, 198, 202, 1084, 1179
MspR9I	CCNGG	6 cut(s)	87, 177, 198, 459, 1078, 1084
MvaI	CCWGG	3 cut(s)	87, 459, 1078
MwoI	GCNNNNNNNGC	5 cut(s)	320, 563, 1015, 1166, 1175
NciI	CCSGG	3 cut(s)	177, 198, 1084
NcoI	CCATGG	1 cut(s)	1149
NdeII	GATC	5 cut(s)	242, 349, 450, 1090, 1153
NlaIII	CATG	6 cut(s)	1042, 1047, 1153, 1192, 1290, 1416
NlaIV	GGNNCC	6 cut(s)	195, 253, 262, 491, 1082, 1186
NmeAIII	GCCGAG	1 cut(s)	466
NmuCI	GTSAC	3 cut(s)	334, 502, 1312
NspI	RCATGY	1 cut(s)	1290
PaeR7I	CTCGAG	1 cut(s)	1328
PciI	ACATGT	1 cut(s)	1286
PdmI	GAANNNNTTC	1 cut(s)	362
PfeI	GAWTC	8 cut(s)	10, 53, 395, 668, 851, 937, 980, 1056
PflMI	CCANNNNNTGG	2 cut(s)	271, 1044
PkrI	GCNGC	4 cut(s)	322, 556, 1210, 1372
PleI	GAGTC	2 cut(s)	331, 479
PpsI	GAGTC	2 cut(s)	331, 479
PscI	ACATGT	1 cut(s)	1286
Psp6I	CCWGG	3 cut(s)	85, 457, 1076
PspGI	CCWGG	3 cut(s)	85, 457, 1076
PspN4I	GGNNCC	6 cut(s)	195, 253, 262, 491, 1082, 1186
PspPI	GGNCC	5 cut(s)	218, 313, 614, 1080, 1176
PspXI	VCTCGAGB	1 cut(s)	1328
PstNI	CAGNNNCTG	1 cut(s)	746
PsuI	RGATCY	2 cut(s)	242, 1153
PvuII	CAGCTG	2 cut(s)	26, 323
RsaI	GTAC	1 cut(s)	1341
RsaNI	GTAC	1 cut(s)	1340
RseI	CAYNNNNRTG	1 cut(s)	495
SaqAI	TTAA	5 cut(s)	33, 405, 414, 792, 1119
SatI	GCNGC	4 cut(s)	321, 555, 1209, 1371
Sau3AI	GATC	5 cut(s)	242, 349, 450, 1090, 1153
Sau96I	GGNCC	5 cut(s)	218, 313, 614, 1080, 1176
SchI	GAGTC	2 cut(s)	331, 480
ScrFI	CCNGG	6 cut(s)	87, 177, 198, 459, 1078, 1084
SduI	GDGCHC	2 cut(s)	198, 721
SfaNI	GCATC	2 cut(s)	487, 793
Sfr274I	CTCGAG	1 cut(s)	1328
SinI	GGWCC	1 cut(s)	218
SlaI	CTCGAG	1 cut(s)	1328
SmiMI	CAYNNNNRTG	1 cut(s)	495
SmlI	CTYRAG	1 cut(s)	1328
SmoI	CTYRAG	1 cut(s)	1328
SpeI	ACTAGT	1 cut(s)	376
Sse9I	AATT	7 cut(s)	30, 138, 299, 654, 684, 1248, 1335
SspMI	CTAG	5 cut(s)	317, 377, 434, 878, 992
StyD4I	CCNGG	6 cut(s)	85, 175, 196, 457, 1076, 1082
StyI	CCWWGG	2 cut(s)	700, 1149
TaaI	ACNGT	5 cut(s)	124, 508, 550, 847, 999
TaiI	ACGT	1 cut(s)	1137
TaqI	TCGA	6 cut(s)	348, 477, 927, 962, 1239, 1329
TasI	AATT	7 cut(s)	30, 138, 299, 654, 684, 1248, 1335
TatI	WGTACW	1 cut(s)	1339
TfiI	GAWTC	8 cut(s)	10, 53, 395, 668, 851, 937, 980, 1056
Tru1I	TTAA	5 cut(s)	33, 405, 414, 792, 1119
Tru9I	TTAA	5 cut(s)	33, 405, 414, 792, 1119
TscAI	CASTG	2 cut(s)	149, 698
TseFI	GTSAC	3 cut(s)	334, 502, 1312
TseI	GCWGC	4 cut(s)	320, 554, 1208, 1370
Tsp45I	GTSAC	3 cut(s)	334, 502, 1312
TspDTI	ATGAA	6 cut(s)	408, 423, 929, 972, 1230, 1257
TspRI	CASTG	2 cut(s)	149, 698
Van91I	CCANNNNNTGG	2 cut(s)	271, 1044
VneI	GTGCAC	1 cut(s)	717
VpaK11BI	GGWCC	1 cut(s)	218
XapI	RAATTY	3 cut(s)	138, 299, 654
XbaI	TCTAGA	1 cut(s)	433
XceI	RCATGY	1 cut(s)	1290
XcmI	CCANNNNNNNNNTGG	3 cut(s)	46, 168, 902
XhoI	CTCGAG	1 cut(s)	1328
XmnI	GAANNNNTTC	1 cut(s)	362
XspI	CTAG	5 cut(s)	317, 377, 434, 878, 992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.