MD06G1207400.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Reverse (-)
34184794 .. 34188267
3474 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1207400.v1.1.491

Sequence Viewer

Length: 1038 bp
ATGGGGTGCACATTCTCTGGTTTAGGCGCTCTGTACGACGCCGTGAACGGCGGAGGCGACGTGTGGATCAACGAGAACCGGTTCAAGATCGTGAGGCAGCTCGGGGAAGGTGGGTTCGCCTATGTGTTTTTGGTCAAGGAGGTGGTCGCCGATTCCTCTGCCTCCGGCGGTGGCGGCCTCGCCAAGAAATTCAAGGATCCCTCTCACGTCTCAGATGATGGAACTTATGCTATGAAAAAGGTTCTCATTCAGAATAGTGAGCAGTTGGAGTTGGTGAAGGAGGAGATCCGTGTTTCATCGCTGTTCAGTCATCCCAATCTGCTTCCACTTCTTGATCATGCCATTATTGCCGTTAAGACTACACAAGAACAATCTTGGAACCATGAAGCATACTTGTTATTTCCCGTTCATCTGGATGGAACATTACTGGACAATGCCAAGACTATGAAAACTAAAAAGGAGTTCTTTTCCACCTCAGATGTTCTTCAAATATTCCGGCAGCTTTGTGCAGGACTCAAGCATATGCACACTTTCGATCCACCATATGCACATAATGATATCAAACCTGGTAACGTTCTGATAACCCATAGAAAGGGACAATCACCTCTTGCAATATTGATGGATTTTGGCAGTGCTCGACCTGCGAGGAGGCAAATTCGCTCTCGTACAGAGGCACTACAGTTGCAGGAATGGGCGTCTGAGCATTGCTCGGCACCATTTCGAGCTCCAGAGTTGTGGGATTGCCCAAGCCAAGCCGATATTGACGAGAGAACTGATGTATGGTCATTAGGATGCACTTTGTATGCAATACTGTACGGAATGTCTCCATTTGAATATGCACTCGGCGAATCTGGAGGAAGCCTACAATTGGCCATAGTCAATGTGCAGATAAAGTGGCCAGCCGGACCTAATCCTCCATATCCGGATGCTCTTCACCAGTTCATCACATGGATGCTTCAGCCGCAGGCTGCAGTCCGTCCGCGCATTGACGATATCCTAATTCACGTGGACAAGTTGATCGCCAAGTTCTCCAAGTGA

Protein Analysis

346

Amino Acids

38.39

Weight (kDa)

6.31

Isoelectric Point (pI)

50.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 31 - 332 8e-14 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 69 - 335 2.3e-29 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 649
AccB1I GGYRCC 1 cut(s) 712
AccII CGCG 1 cut(s) 982
AccIII TCCGGA 1 cut(s) 922
AciI CCGC 5 cut(s) 51, 168, 174, 962, 980
AclI AACGTT 1 cut(s) 573
AclWI GGATC 5 cut(s) 74, 191, 204, 280, 530
AcoI YGGCCR 2 cut(s) 870, 896
AcsI RAATTY 2 cut(s) 188, 654
AcuI CTGAAG 1 cut(s) 941
AcvI CACGTG 1 cut(s) 1006
AcyI GRCGYC 2 cut(s) 39, 695
AfaI GTAC 3 cut(s) 35, 667, 815
AfiI CCNNNNNNNGG 2 cut(s) 592, 868
AflIII ACRYGT 1 cut(s) 60
AgeI ACCGGT 1 cut(s) 78
AgsI TTSAA 4 cut(s) 85, 193, 488, 833
AjiI CACGTC 2 cut(s) 61, 208
AjnI CCWGG 1 cut(s) 565
AloI GAACNNNNNNTCC 2 cut(s) 98, 130
AluBI AGCT 3 cut(s) 100, 502, 725
AluI AGCT 3 cut(s) 100, 502, 725
Alw21I GWGCWC 3 cut(s) 11, 637, 727
Alw26I GTCTC 2 cut(s) 214, 828
Alw44I GTGCAC 1 cut(s) 7
AlwI GGATC 5 cut(s) 74, 191, 204, 280, 530
Ama87I CYCGRG 1 cut(s) 101
Aor13HI TCCGGA 1 cut(s) 922
AoxI GGCC 3 cut(s) 175, 870, 896
ApaLI GTGCAC 1 cut(s) 7
ApeKI GCWGC 3 cut(s) 97, 499, 968
ApoI RAATTY 2 cut(s) 188, 654
AsiGI ACCGGT 1 cut(s) 78
Asp700I GAANNNNTTC 1 cut(s) 80
AspLEI GCGC 2 cut(s) 29, 984
AspS9I GGNCC 1 cut(s) 905
AsuHPI GGTGA 3 cut(s) 286, 594, 926
AvaI CYCGRG 1 cut(s) 101
AvaII GGWCC 1 cut(s) 905
BaeGI GKGCMC 1 cut(s) 11
BalI TGGCCA 2 cut(s) 872, 898
BamHI GGATCC 1 cut(s) 196
BanI GGYRCC 1 cut(s) 712
BanII GRGCYC 1 cut(s) 727
BbrPI CACGTG 1 cut(s) 1006
Bbv12I GWGCWC 3 cut(s) 11, 637, 727
BbvI GCAGC 3 cut(s) 109, 511, 955
BccI CCATC 3 cut(s) 212, 410, 613
BceAI ACGGC 3 cut(s) 26, 64, 335
BcgI CGANNNNNNTGC 2 cut(s) 140, 174
BciT130I CCWGG 1 cut(s) 567
BclI TGATCA 1 cut(s) 334
BcoDI GTCTC 2 cut(s) 214, 828
BfmI CTRYAG 2 cut(s) 677, 969
BfoI RGCGCY 1 cut(s) 30
BfuAI ACCTGC 1 cut(s) 649
BisI GCNGC 5 cut(s) 98, 175, 500, 962, 969
BlsI GCNGC 5 cut(s) 99, 176, 501, 963, 970
Bme1390I CCNGG 1 cut(s) 567
Bme18I GGWCC 1 cut(s) 905
BmeT110I CYCGRG 1 cut(s) 101
BmgBI CACGTC 2 cut(s) 61, 208
BmgT120I GGNCC 1 cut(s) 905
BmiI GGNNCC 3 cut(s) 198, 380, 714
BmrFI CCNGG 1 cut(s) 567
BmsI GCATC 3 cut(s) 782, 916, 942
BplI GAGNNNNNCTC 2 cut(s) 692, 724
BpmI CTGGAG 2 cut(s) 711, 873
BpuEI CTTGAG 1 cut(s) 500
BsaAI YACGTR 1 cut(s) 1006
BsaHI GRCGYC 2 cut(s) 39, 695
BsaWI WCCGGW 2 cut(s) 78, 922
BsaXI ACNNNNNCTCC 2 cut(s) 45, 75
Bsc4I CCNNNNNNNGG 2 cut(s) 592, 868
Bse118I RCCGGY 1 cut(s) 78
Bse1I ACTGG 2 cut(s) 432, 937
Bse3DI GCAATG 1 cut(s) 703
BseAI TCCGGA 1 cut(s) 922
BseBI CCWGG 1 cut(s) 567
BseGI GGATG 5 cut(s) 310, 421, 797, 931, 957
BseLI CCNNNNNNNGG 2 cut(s) 592, 868
BseMI GCAATG 1 cut(s) 703
BseMII CTCAG 3 cut(s) 225, 489, 690
BseNI ACTGG 2 cut(s) 432, 937
BseRI GAGGAG 2 cut(s) 296, 661
BseSI GKGCMC 1 cut(s) 11
BseXI GCAGC 3 cut(s) 109, 511, 955
BsgI GTGCAG 2 cut(s) 528, 905
Bsh1236I CGCG 1 cut(s) 982
BshFI GGCC 3 cut(s) 177, 872, 898
BshNI GGYRCC 1 cut(s) 712
BshTI ACCGGT 1 cut(s) 78
BsiHKAI GWGCWC 3 cut(s) 11, 637, 727
BsiHKCI CYCGRG 1 cut(s) 101
BsiSI CCGG 5 cut(s) 79, 165, 496, 903, 923
BslFI GGGAC 1 cut(s) 609
BslI CCNNNNNNNGG 2 cut(s) 592, 868
BsmAI GTCTC 2 cut(s) 214, 828
BsmBI CGTCTC 1 cut(s) 214
BsmFI GGGAC 1 cut(s) 609
BsnI GGCC 3 cut(s) 177, 872, 898
BsoBI CYCGRG 1 cut(s) 101
Bsp1286I GDGCHC 3 cut(s) 11, 637, 727
Bsp13I TCCGGA 1 cut(s) 922
Bsp143I GATC 7 cut(s) 66, 87, 196, 285, 334, 535, 1017
BspACI CCGC 5 cut(s) 51, 168, 174, 962, 980
BspANI GGCC 3 cut(s) 177, 872, 898
BspCNI CTCAG 3 cut(s) 224, 488, 691
BspEI TCCGGA 1 cut(s) 922
BspFNI CGCG 1 cut(s) 982
BspLI GGNNCC 3 cut(s) 198, 380, 714
BspMAI CTGCAG 1 cut(s) 973
BspMI ACCTGC 1 cut(s) 649
BspPI GGATC 5 cut(s) 74, 191, 204, 280, 530
BspQI GCTCTTC 1 cut(s) 936
BspT107I GGYRCC 1 cut(s) 712
BsrDI GCAATG 1 cut(s) 703
BsrFI RCCGGY 1 cut(s) 78
BsrI ACTGG 2 cut(s) 432, 937
BssAI RCCGGY 1 cut(s) 78
BssMI GATC 7 cut(s) 66, 87, 196, 285, 334, 535, 1017
BssNI GRCGYC 2 cut(s) 39, 695
Bst2UI CCWGG 1 cut(s) 567
Bst4CI ACNGT 2 cut(s) 681, 813
Bst6I CTCTTC 1 cut(s) 936
BstACI GRCGYC 2 cut(s) 39, 695
BstBAI YACGTR 1 cut(s) 1006
BstC8I GCNNGC 2 cut(s) 900, 966
BstDEI CTNAG 3 cut(s) 211, 475, 699
BstF5I GGATG 5 cut(s) 310, 421, 797, 931, 957
BstFNI CGCG 1 cut(s) 982
BstH2I RGCGCY 1 cut(s) 30
BstHHI GCGC 2 cut(s) 29, 984
BstKTI GATC 7 cut(s) 69, 90, 199, 288, 337, 538, 1020
BstMAI GTCTC 2 cut(s) 214, 828
BstMBI GATC 7 cut(s) 66, 87, 196, 285, 334, 535, 1017
BstMWI GCNNNNNNNGC 4 cut(s) 174, 347, 641, 961
BstNI CCWGG 1 cut(s) 567
BstSCI CCNGG 1 cut(s) 565
BstSFI CTRYAG 2 cut(s) 677, 969
BstSLI GKGCMC 1 cut(s) 11
BstUI CGCG 1 cut(s) 982
BstV1I GCAGC 3 cut(s) 109, 511, 955
BstX2I RGATCY 2 cut(s) 196, 285
BstXI CCANNNNNNTGG 1 cut(s) 735
BstYI RGATCY 2 cut(s) 196, 285
BsuRI GGCC 3 cut(s) 177, 872, 898
BtgZI GCGATG 1 cut(s) 282
BtrI CACGTC 2 cut(s) 61, 208
BtsCI GGATG 5 cut(s) 310, 421, 797, 931, 957
BtsI GCAGTG 1 cut(s) 637
BtsIMutI CAGTG 1 cut(s) 637
BveI ACCTGC 1 cut(s) 649
Cac8I GCNNGC 2 cut(s) 900, 966
CfoI GCGC 2 cut(s) 29, 984
Cfr10I RCCGGY 1 cut(s) 78
Cfr13I GGNCC 1 cut(s) 905
CseI GACGC 2 cut(s) 47, 684
CsiI ACCWGGT 1 cut(s) 565
Csp6I GTAC 3 cut(s) 34, 666, 814
CspAI ACCGGT 1 cut(s) 78
CviAII CATG 3 cut(s) 338, 383, 948
CviQI GTAC 3 cut(s) 34, 666, 814
DdeI CTNAG 3 cut(s) 211, 475, 699
DpnI GATC 7 cut(s) 68, 89, 198, 287, 336, 537, 1019
DpnII GATC 7 cut(s) 66, 87, 196, 285, 334, 535, 1017
EaeI YGGCCR 2 cut(s) 870, 896
Eam1104I CTCTTC 1 cut(s) 936
EarI CTCTTC 1 cut(s) 936
EciI GGCGGA 1 cut(s) 66
Ecl136II GAGCTC 1 cut(s) 725
Eco24I GRGCYC 1 cut(s) 727
Eco32I GATATC 2 cut(s) 559, 994
Eco47I GGWCC 1 cut(s) 905
Eco53kI GAGCTC 1 cut(s) 725
Eco57I CTGAAG 1 cut(s) 941
Eco72I CACGTG 1 cut(s) 1006
Eco88I CYCGRG 1 cut(s) 101
EcoICRI GAGCTC 1 cut(s) 725
EcoRII CCWGG 1 cut(s) 565
EcoRV GATATC 2 cut(s) 559, 994
EcoT38I GRGCYC 1 cut(s) 727
Esp3I CGTCTC 1 cut(s) 214
FaeI CATG 3 cut(s) 341, 386, 951
FalI AAGNNNNNCTT 2 cut(s) 449, 481
FaqI GGGAC 1 cut(s) 609
FatI CATG 3 cut(s) 337, 382, 947
FauNDI CATATG 2 cut(s) 522, 544
FbaI TGATCA 1 cut(s) 334
Fnu4HI GCNGC 5 cut(s) 98, 175, 500, 962, 969
FokI GGATG 5 cut(s) 297, 428, 804, 938, 964
FriOI GRGCYC 1 cut(s) 727
Fsp4HI GCNGC 5 cut(s) 98, 175, 500, 962, 969
GlaI GCGC 2 cut(s) 28, 983
GluI GCNGC 5 cut(s) 98, 175, 500, 962, 969
GsuI CTGGAG 2 cut(s) 711, 873
HaeII RGCGCY 1 cut(s) 30
HaeIII GGCC 3 cut(s) 177, 872, 898
HapII CCGG 5 cut(s) 79, 165, 496, 903, 923
HgaI GACGC 2 cut(s) 47, 684
HhaI GCGC 2 cut(s) 29, 984
Hin1I GRCGYC 2 cut(s) 39, 695
Hin1II CATG 3 cut(s) 341, 386, 951
Hin6I GCGC 2 cut(s) 27, 982
HinP1I GCGC 2 cut(s) 27, 982
HinfI GANTC 3 cut(s) 152, 513, 848
HpaII CCGG 5 cut(s) 79, 165, 496, 903, 923
HphI GGTGA 3 cut(s) 286, 594, 926
Hpy166II GTNNAC 3 cut(s) 9, 46, 1009
Hpy188I TCNGA 5 cut(s) 214, 252, 478, 579, 700
Hpy188III TCNNGA 7 cut(s) 85, 91, 332, 413, 728, 852, 923
Hpy8I GTNNAC 3 cut(s) 9, 46, 1009
Hpy99I CGWCG 2 cut(s) 41, 62
HpyAV CCTTC 2 cut(s) 101, 271
HpyCH4III ACNGT 2 cut(s) 681, 813
HpyCH4IV ACGT 4 cut(s) 60, 207, 573, 1005
HpyF10VI GCNNNNNNNGC 4 cut(s) 174, 347, 641, 961
HpyF3I CTNAG 3 cut(s) 211, 475, 699
HpySE526I ACGT 4 cut(s) 60, 207, 573, 1005
Hsp92I GRCGYC 2 cut(s) 39, 695
Hsp92II CATG 3 cut(s) 341, 386, 951
HspAI GCGC 2 cut(s) 27, 982
Kpn2I TCCGGA 1 cut(s) 922
Ksp22I TGATCA 1 cut(s) 334
Kzo9I GATC 7 cut(s) 66, 87, 196, 285, 334, 535, 1017
LguI GCTCTTC 1 cut(s) 936
LmnI GCTCC 1 cut(s) 730
Lsp1109I GCAGC 3 cut(s) 109, 511, 955
LweI GCATC 3 cut(s) 782, 916, 942
MabI ACCWGGT 1 cut(s) 565
MaeII ACGT 4 cut(s) 60, 207, 573, 1005
MaeIII GTNAC 1 cut(s) 569
MalI GATC 7 cut(s) 68, 89, 198, 287, 336, 537, 1019
MboI GATC 7 cut(s) 66, 87, 196, 285, 334, 535, 1017
MboII GAAGA 2 cut(s) 476, 923
MfeI CAATTG 1 cut(s) 866
MflI RGATCY 2 cut(s) 196, 285
MhlI GDGCHC 3 cut(s) 11, 637, 727
MlsI TGGCCA 2 cut(s) 872, 898
MluCI AATT 4 cut(s) 188, 654, 866, 999
MluNI TGGCCA 2 cut(s) 872, 898
MlyI GAGTC 1 cut(s) 507
MmeI TCCRAC 1 cut(s) 246
Mox20I TGGCCA 2 cut(s) 872, 898
MroI TCCGGA 1 cut(s) 922
MroXI GAANNNNTTC 1 cut(s) 80
MscI TGGCCA 2 cut(s) 872, 898
MseI TTAA 1 cut(s) 354
MslI CAYNNNNRTG 3 cut(s) 414, 790, 950
Msp20I TGGCCA 2 cut(s) 872, 898
MspI CCGG 5 cut(s) 79, 165, 496, 903, 923
MspR9I CCNGG 1 cut(s) 567
MunI CAATTG 1 cut(s) 866
MvaI CCWGG 1 cut(s) 567
MvnI CGCG 1 cut(s) 982
MwoI GCNNNNNNNGC 4 cut(s) 174, 347, 641, 961
NdeI CATATG 2 cut(s) 522, 544
NdeII GATC 7 cut(s) 66, 87, 196, 285, 334, 535, 1017
NlaIII CATG 3 cut(s) 341, 386, 951
NlaIV GGNNCC 3 cut(s) 198, 380, 714
NmeAIII GCCGAG 2 cut(s) 689, 822
PciSI GCTCTTC 1 cut(s) 936
PcsI WCGNNNNNNNCGW 1 cut(s) 54
PdmI GAANNNNTTC 1 cut(s) 80
PfeI GAWTC 2 cut(s) 152, 848
PinAI ACCGGT 1 cut(s) 78
PkrI GCNGC 5 cut(s) 99, 176, 501, 963, 970
PleI GAGTC 1 cut(s) 507
PmaCI CACGTG 1 cut(s) 1006
PmlI CACGTG 1 cut(s) 1006
PpsI GAGTC 1 cut(s) 507
Ppu21I YACGTR 1 cut(s) 1006
Psp124BI GAGCTC 1 cut(s) 727
Psp1406I AACGTT 1 cut(s) 573
Psp6I CCWGG 1 cut(s) 565
PspCI CACGTG 1 cut(s) 1006
PspGI CCWGG 1 cut(s) 565
PspN4I GGNNCC 3 cut(s) 198, 380, 714
PspPI GGNCC 1 cut(s) 905
PstI CTGCAG 1 cut(s) 973
PsuI RGATCY 2 cut(s) 196, 285
RsaI GTAC 3 cut(s) 35, 667, 815
RsaNI GTAC 3 cut(s) 34, 666, 814
RseI CAYNNNNRTG 3 cut(s) 414, 790, 950
SacI GAGCTC 1 cut(s) 727
SapI GCTCTTC 1 cut(s) 936
SaqAI TTAA 1 cut(s) 354
SatI GCNGC 5 cut(s) 98, 175, 500, 962, 969
Sau3AI GATC 7 cut(s) 66, 87, 196, 285, 334, 535, 1017
Sau96I GGNCC 1 cut(s) 905
SchI GAGTC 1 cut(s) 507
ScrFI CCNGG 1 cut(s) 567
SduI GDGCHC 3 cut(s) 11, 637, 727
SexAI ACCWGGT 1 cut(s) 565
SfaNI GCATC 3 cut(s) 782, 916, 942
SfcI CTRYAG 2 cut(s) 677, 969
SinI GGWCC 1 cut(s) 905
SmiMI CAYNNNNRTG 3 cut(s) 414, 790, 950
SmlI CTYRAG 1 cut(s) 515
SmoI CTYRAG 1 cut(s) 515
Sse9I AATT 4 cut(s) 188, 654, 866, 999
SsiI CCGC 5 cut(s) 51, 168, 174, 962, 980
SspI AATATT 2 cut(s) 492, 615
SstI GAGCTC 1 cut(s) 727
StyD4I CCNGG 1 cut(s) 565
TaaI ACNGT 2 cut(s) 681, 813
TaiI ACGT 4 cut(s) 63, 210, 576, 1008
TaqI TCGA 3 cut(s) 534, 637, 721
TasI AATT 4 cut(s) 188, 654, 866, 999
TauI GCSGC 2 cut(s) 177, 964
TfiI GAWTC 2 cut(s) 152, 848
Tru1I TTAA 1 cut(s) 354
Tru9I TTAA 1 cut(s) 354
TscAI CASTG 1 cut(s) 637
TseI GCWGC 3 cut(s) 97, 499, 968
TspDTI ATGAA 6 cut(s) 248, 285, 398, 399, 461, 931
TspGWI ACGGA 3 cut(s) 278, 831, 965
TspRI CASTG 1 cut(s) 637
VneI GTGCAC 1 cut(s) 7
VpaK11BI GGWCC 1 cut(s) 905
XapI RAATTY 2 cut(s) 188, 654
XmnI GAANNNNTTC 1 cut(s) 80
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.