Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0009559

Physical Location & Seq

Genomic Coordinates Reverse (-)

16793877 .. 16797172

Gene Structure 3296 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G211800.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1038 bp

ATGGGTTGTACATTCTCTGGTTTGAACGCTCTCTACGATGCCGTTAACGGGGGAGGTGACGTGTGGATCAATGAGACTCGGTTCAAGATCGTGAGGCAGCTCGGGGAAGGTGGGTTCGCCTATGTGTTTTTGGTCAAGGAGGTGGTCTCCGACTCCTCTGCCTCTGGTGGTGGTGGTCTCGCTAAGAAATTCAAGGACCCCTCTCATGTATCAGATGATGGAACTTATGCTATGAAAAAAGTTCTCATTCAGAATAGTGAGCAGTTGGAGTTGGTGAAGGAGGAGATCCGAGTTTCATCACTGTTCAGTCATCCTAATCTGCTTCCACTTCTTGATCATGCCATTATTTCCGTTAAGCCTACACAAGAAGCATCTTGGAACCATGAAGCATACTTGTTATTTCCAGTTCATCTGGACGGAACATTACTGGACAATGCCAAGACTATGAAGACTAAAAAGGAGTTCTTTTCCACCTCAGATGTTCTTCAAATATTCCGGCAGATTTGTGCAGGACTCAAGCATATGCACAGTTTTGATCCCCCATATGCGCATAATGATATCAAACCTGGAAACGTTCTGATAACTCATAGAAAAGGACAACCACCTCTTGCTATATTGATGGATTTTGGCAGTGCTCGACCCGCAAGGAGGCAAATTCGCTCTCGTTCAGAGGCACTTCAGTTGCAGGAATGGGCGTCTGAGCACTGTTCAGCACCATTTCGAGCTCCAGAATTGTGGGATTGCCCAAGCCATGCAGATATTGACGAAAGAACTGATATATGGTCCTTAGGATGCACTTTGTATGCAATACTGTATGGAGTATCTCCATTTGAATATGCACTTGGAGAATCTGGAGGAAGCCTACAGTTGGCAATAGTCAATGTGCAGATAAAGTGGCCAGCTGGTCCTAAGCCTCCATATCCAGATGCTCTTCACCAGTTTATTACATGGATGCTTCAGCCACAGGCTGCAGTCCGTCCTCGCATTGATGATATTATAATACATGTGGACAAGTTGATCTCCAAGTTCTCTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009719 GO:0009987 GO:0010033 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0050896 GO:0051716 GO:0070848 GO:0070887 GO:0071310 GO:0071363 GO:0071495 GO:0071559 GO:0071560 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

346

Amino Acids

38.41

Weight (kDa)

6.35

Isoelectric Point (pI)

46.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009559)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08160 AT5G08160
fragaria_vesca	FvH4_5g13060
malus_domestica	MD06G1207400.v1.1 MD14G1217900.v1.1
prunus_persica	Prupe.5G211800_v2.0.a1 Prupe.5G211800_v2.0.a1 Prupe.5G211800_v2.0.a1
pyrus_communis	pycom06g18530 pycom14g18070
rosa_chinensis	RchiOBHm_Chr7g0184071
rosa_laevigata	RLG00000005003
rosa_multiflora	Rmu_sc0004712.1_g000009 Rmu_sc0007533.1_g000019
rosa_roxburghii	Rroxscaffold_3G00269910
rosa_rugosa	Rorug06G0462500 Rorug06G0462600
rosa_samantha	Rh7AG083100 Rh7BG063900 Rh7CG064600 Rh7DG064100
rosa_wichuraiana	Rw7G005250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	998
Acc16I	TGCGCA	1 cut(s)	549
AciI	CCGC	1 cut(s)	642
AclI	AACGTT	1 cut(s)	573
AclWI	GGATC	3 cut(s)	74, 280, 530
AcoI	YGGCCR	1 cut(s)	896
AcsI	RAATTY	2 cut(s)	188, 654
AcuI	CTGAAG	2 cut(s)	662, 941
AcyI	GRCGYC	1 cut(s)	695
AfaI	GTAC	1 cut(s)	10
AfiI	CCNNNNNNNGG	3 cut(s)	48, 648, 868
AflIII	ACRYGT	2 cut(s)	60, 1003
AgsI	TTSAA	5 cut(s)	25, 85, 193, 488, 833
AjiI	CACGTC	1 cut(s)	61
AjnI	CCWGG	1 cut(s)	565
AjuI	GAANNNNNNNTTGG	2 cut(s)	825, 857
AloI	GAACNNNNNNTCC	2 cut(s)	98, 130
AluBI	AGCT	3 cut(s)	100, 725, 902
AluI	AGCT	3 cut(s)	100, 725, 902
Alw21I	GWGCWC	3 cut(s)	637, 705, 727
Alw26I	GTCTC	3 cut(s)	68, 151, 182
AlwI	GGATC	3 cut(s)	74, 280, 530
Ama87I	CYCGRG	1 cut(s)	101
AoxI	GGCC	1 cut(s)	896
ApeKI	GCWGC	2 cut(s)	97, 968
ApoI	RAATTY	2 cut(s)	188, 654
AspLEI	GCGC	1 cut(s)	550
AspS9I	GGNCC	3 cut(s)	196, 783, 905
AsuHPI	GGTGA	3 cut(s)	68, 286, 926
AvaI	CYCGRG	1 cut(s)	101
AvaII	GGWCC	3 cut(s)	196, 783, 905
AxyI	CCTNAGG	1 cut(s)	787
BalI	TGGCCA	1 cut(s)	898
BanII	GRGCYC	1 cut(s)	727
BbsI	GAAGAC	1 cut(s)	455
Bbv12I	GWGCWC	3 cut(s)	637, 705, 727
BbvI	GCAGC	2 cut(s)	109, 955
BccI	CCATC	2 cut(s)	212, 613
BceAI	ACGGC	1 cut(s)	26
BcgI	CGANNNNNNTGC	2 cut(s)	140, 174
BciT130I	CCWGG	1 cut(s)	567
BclI	TGATCA	1 cut(s)	334
BcoDI	GTCTC	3 cut(s)	68, 151, 182
BfmI	CTRYAG	2 cut(s)	863, 969
BisI	GCNGC	2 cut(s)	98, 969
BlsI	GCNGC	2 cut(s)	99, 970
Bme1390I	CCNGG	1 cut(s)	567
Bme18I	GGWCC	3 cut(s)	196, 783, 905
BmeT110I	CYCGRG	1 cut(s)	101
BmgBI	CACGTC	1 cut(s)	61
BmgT120I	GGNCC	3 cut(s)	196, 783, 905
BmiI	GGNNCC	2 cut(s)	198, 380
BmrFI	CCNGG	1 cut(s)	567
BmsI	GCATC	5 cut(s)	28, 380, 782, 916, 942
BpiI	GAAGAC	1 cut(s)	455
BplI	GAGNNNNNCTC	2 cut(s)	131, 163
BpmI	CTGGAG	2 cut(s)	711, 873
Bpu10I	CCTNAGC	1 cut(s)	909
BpuEI	CTTGAG	1 cut(s)	500
BsaHI	GRCGYC	1 cut(s)	695
BsaI	GGTCTC	2 cut(s)	151, 182
BsaXI	ACNNNNNCTCC	2 cut(s)	45, 75
Bsc4I	CCNNNNNNNGG	3 cut(s)	48, 648, 868
Bse1I	ACTGG	3 cut(s)	404, 432, 937
Bse21I	CCTNAGG	1 cut(s)	787
BseBI	CCWGG	1 cut(s)	567
BseGI	GGATG	3 cut(s)	310, 797, 957
BseLI	CCNNNNNNNGG	3 cut(s)	48, 648, 868
BseMII	CTCAG	2 cut(s)	489, 690
BseNI	ACTGG	3 cut(s)	404, 432, 937
BseRI	GAGGAG	2 cut(s)	145, 296
BseXI	GCAGC	2 cut(s)	109, 955
BsgI	GTGCAG	2 cut(s)	528, 905
BshFI	GGCC	1 cut(s)	898
BsiHKAI	GWGCWC	3 cut(s)	637, 705, 727
BsiHKCI	CYCGRG	1 cut(s)	101
BsiSI	CCGG	1 cut(s)	496
BslI	CCNNNNNNNGG	3 cut(s)	48, 648, 868
BsmAI	GTCTC	3 cut(s)	68, 151, 182
BsnI	GGCC	1 cut(s)	898
Bso31I	GGTCTC	2 cut(s)	151, 182
BsoBI	CYCGRG	1 cut(s)	101
Bsp1286I	GDGCHC	3 cut(s)	637, 705, 727
Bsp1407I	TGTACA	1 cut(s)	8
Bsp143I	GATC	6 cut(s)	66, 87, 285, 334, 535, 1017
BspACI	CCGC	1 cut(s)	642
BspANI	GGCC	1 cut(s)	898
BspCNI	CTCAG	2 cut(s)	488, 691
BspLI	GGNNCC	2 cut(s)	198, 380
BspMAI	CTGCAG	1 cut(s)	973
BspPI	GGATC	3 cut(s)	74, 280, 530
BspQI	GCTCTTC	1 cut(s)	936
BspTNI	GGTCTC	2 cut(s)	151, 182
BsrGI	TGTACA	1 cut(s)	8
BsrI	ACTGG	3 cut(s)	404, 432, 937
BssMI	GATC	6 cut(s)	66, 87, 285, 334, 535, 1017
BssNI	GRCGYC	1 cut(s)	695
Bst2UI	CCWGG	1 cut(s)	567
Bst4CI	ACNGT	5 cut(s)	303, 530, 707, 813, 867
Bst6I	CTCTTC	1 cut(s)	936
BstACI	GRCGYC	1 cut(s)	695
BstAUI	TGTACA	1 cut(s)	8
BstC8I	GCNNGC	1 cut(s)	900
BstDEI	CTNAG	6 cut(s)	183, 475, 699, 787, 909, 1032
BstF5I	GGATG	3 cut(s)	310, 797, 957
BstHHI	GCGC	1 cut(s)	550
BstKTI	GATC	6 cut(s)	69, 90, 288, 337, 538, 1020
BstMAI	GTCTC	3 cut(s)	68, 151, 182
BstMBI	GATC	6 cut(s)	66, 87, 285, 334, 535, 1017
BstMWI	GCNNNNNNNGC	1 cut(s)	641
BstNI	CCWGG	1 cut(s)	567
BstNSI	RCATGY	1 cut(s)	1007
BstSCI	CCNGG	1 cut(s)	565
BstSFI	CTRYAG	2 cut(s)	863, 969
BstV1I	GCAGC	2 cut(s)	109, 955
BstV2I	GAAGAC	1 cut(s)	455
BstX2I	RGATCY	1 cut(s)	285
BstXI	CCANNNNNNTGG	1 cut(s)	735
BstYI	RGATCY	1 cut(s)	285
Bsu36I	CCTNAGG	1 cut(s)	787
BsuRI	GGCC	1 cut(s)	898
BtrI	CACGTC	1 cut(s)	61
BtsCI	GGATG	3 cut(s)	310, 797, 957
BtsI	GCAGTG	1 cut(s)	637
BtsIMutI	CAGTG	3 cut(s)	299, 637, 703
Cac8I	GCNNGC	1 cut(s)	900
CfoI	GCGC	1 cut(s)	550
Cfr13I	GGNCC	3 cut(s)	196, 783, 905
CseI	GACGC	1 cut(s)	684
Csp6I	GTAC	1 cut(s)	9
CviAII	CATG	6 cut(s)	206, 338, 383, 752, 948, 1004
CviQI	GTAC	1 cut(s)	9
DdeI	CTNAG	6 cut(s)	183, 475, 699, 787, 909, 1032
DpnI	GATC	6 cut(s)	68, 89, 287, 336, 537, 1019
DpnII	GATC	6 cut(s)	66, 87, 285, 334, 535, 1017
EaeI	YGGCCR	1 cut(s)	896
Eam1104I	CTCTTC	1 cut(s)	936
EarI	CTCTTC	1 cut(s)	936
Ecl136II	GAGCTC	1 cut(s)	725
Eco24I	GRGCYC	1 cut(s)	727
Eco31I	GGTCTC	2 cut(s)	151, 182
Eco32I	GATATC	1 cut(s)	559
Eco47I	GGWCC	3 cut(s)	196, 783, 905
Eco53kI	GAGCTC	1 cut(s)	725
Eco57I	CTGAAG	2 cut(s)	662, 941
Eco81I	CCTNAGG	1 cut(s)	787
Eco88I	CYCGRG	1 cut(s)	101
EcoICRI	GAGCTC	1 cut(s)	725
EcoO109I	RGGNCCY	1 cut(s)	196
EcoRII	CCWGG	1 cut(s)	565
EcoRV	GATATC	1 cut(s)	559
EcoT38I	GRGCYC	1 cut(s)	727
FaeI	CATG	6 cut(s)	209, 341, 386, 755, 951, 1007
FalI	AAGNNNNNCTT	2 cut(s)	449, 481
FatI	CATG	6 cut(s)	205, 337, 382, 751, 947, 1003
FauI	CCCGC	1 cut(s)	649
FauNDI	CATATG	2 cut(s)	522, 544
FbaI	TGATCA	1 cut(s)	334
Fnu4HI	GCNGC	2 cut(s)	98, 969
FokI	GGATG	3 cut(s)	297, 804, 964
FriOI	GRGCYC	1 cut(s)	727
Fsp4HI	GCNGC	2 cut(s)	98, 969
FspAI	RTGCGCAY	1 cut(s)	549
FspI	TGCGCA	1 cut(s)	549
GlaI	GCGC	1 cut(s)	549
GluI	GCNGC	2 cut(s)	98, 969
GsuI	CTGGAG	2 cut(s)	711, 873
HaeIII	GGCC	1 cut(s)	898
HapII	CCGG	1 cut(s)	496
HgaI	GACGC	1 cut(s)	684
HhaI	GCGC	1 cut(s)	550
Hin1I	GRCGYC	1 cut(s)	695
Hin1II	CATG	6 cut(s)	209, 341, 386, 755, 951, 1007
Hin6I	GCGC	1 cut(s)	548
HinP1I	GCGC	1 cut(s)	548
HincII	GTYRAC	1 cut(s)	46
HindII	GTYRAC	1 cut(s)	46
HinfI	GANTC	4 cut(s)	76, 152, 513, 848
HpaI	GTTAAC	1 cut(s)	46
HpaII	CCGG	1 cut(s)	496
HphI	GGTGA	3 cut(s)	68, 286, 926
Hpy166II	GTNNAC	2 cut(s)	46, 1009
Hpy188I	TCNGA	8 cut(s)	151, 214, 252, 290, 478, 579, 670, 700
Hpy188III	TCNNGA	7 cut(s)	85, 91, 332, 413, 728, 852, 923
Hpy8I	GTNNAC	2 cut(s)	46, 1009
HpyAV	CCTTC	2 cut(s)	101, 271
HpyCH4III	ACNGT	5 cut(s)	303, 530, 707, 813, 867
HpyCH4IV	ACGT	2 cut(s)	60, 573
HpyCH4V	TGCA	9 cut(s)	509, 526, 685, 755, 795, 806, 839, 886, 971
HpyF10VI	GCNNNNNNNGC	1 cut(s)	641
HpyF3I	CTNAG	6 cut(s)	183, 475, 699, 787, 909, 1032
HpySE526I	ACGT	2 cut(s)	60, 573
Hsp92I	GRCGYC	1 cut(s)	695
Hsp92II	CATG	6 cut(s)	209, 341, 386, 755, 951, 1007
HspAI	GCGC	1 cut(s)	548
Ksp22I	TGATCA	1 cut(s)	334
KspAI	GTTAAC	1 cut(s)	46
Kzo9I	GATC	6 cut(s)	66, 87, 285, 334, 535, 1017
LguI	GCTCTTC	1 cut(s)	936
LmnI	GCTCC	1 cut(s)	730
Lsp1109I	GCAGC	2 cut(s)	109, 955
LweI	GCATC	5 cut(s)	28, 380, 782, 916, 942
MaeII	ACGT	2 cut(s)	60, 573
MaeIII	GTNAC	1 cut(s)	56
MalI	GATC	6 cut(s)	68, 89, 287, 336, 537, 1019
MboI	GATC	6 cut(s)	66, 87, 285, 334, 535, 1017
MboII	GAAGA	3 cut(s)	460, 476, 923
MflI	RGATCY	1 cut(s)	285
MhlI	GDGCHC	3 cut(s)	637, 705, 727
MlsI	TGGCCA	1 cut(s)	898
MluCI	AATT	3 cut(s)	188, 654, 731
MluNI	TGGCCA	1 cut(s)	898
MlyI	GAGTC	3 cut(s)	70, 146, 507
MmeI	TCCRAC	2 cut(s)	174, 246
Mox20I	TGGCCA	1 cut(s)	898
MscI	TGGCCA	1 cut(s)	898
MseI	TTAA	2 cut(s)	45, 354
Msp20I	TGGCCA	1 cut(s)	898
MspA1I	CMGCKG	1 cut(s)	902
MspI	CCGG	1 cut(s)	496
MspR9I	CCNGG	1 cut(s)	567
MvaI	CCWGG	1 cut(s)	567
MwoI	GCNNNNNNNGC	1 cut(s)	641
NdeI	CATATG	2 cut(s)	522, 544
NdeII	GATC	6 cut(s)	66, 87, 285, 334, 535, 1017
NlaIII	CATG	6 cut(s)	209, 341, 386, 755, 951, 1007
NlaIV	GGNNCC	2 cut(s)	198, 380
NmuCI	GTSAC	1 cut(s)	56
NsbI	TGCGCA	1 cut(s)	549
NspI	RCATGY	1 cut(s)	1007
PciI	ACATGT	1 cut(s)	1003
PciSI	GCTCTTC	1 cut(s)	936
PcsI	WCGNNNNNNNCGW	1 cut(s)	33
PfeI	GAWTC	1 cut(s)	848
PkrI	GCNGC	2 cut(s)	99, 970
PleI	GAGTC	3 cut(s)	70, 146, 507
PpsI	GAGTC	3 cut(s)	70, 146, 507
PpuMI	RGGWCCY	1 cut(s)	196
PscI	ACATGT	1 cut(s)	1003
PsiI	TTATAA	1 cut(s)	998
Psp124BI	GAGCTC	1 cut(s)	727
Psp1406I	AACGTT	1 cut(s)	573
Psp5II	RGGWCCY	1 cut(s)	196
Psp6I	CCWGG	1 cut(s)	565
PspGI	CCWGG	1 cut(s)	565
PspN4I	GGNNCC	2 cut(s)	198, 380
PspPI	GGNCC	3 cut(s)	196, 783, 905
PspPPI	RGGWCCY	1 cut(s)	196
PsrI	GAACNNNNNNTAC	2 cut(s)	17, 49
PstI	CTGCAG	1 cut(s)	973
PsuI	RGATCY	1 cut(s)	285
PvuII	CAGCTG	1 cut(s)	902
RsaI	GTAC	1 cut(s)	10
RsaNI	GTAC	1 cut(s)	9
SacI	GAGCTC	1 cut(s)	727
SapI	GCTCTTC	1 cut(s)	936
SaqAI	TTAA	2 cut(s)	45, 354
SatI	GCNGC	2 cut(s)	98, 969
Sau3AI	GATC	6 cut(s)	66, 87, 285, 334, 535, 1017
Sau96I	GGNCC	3 cut(s)	196, 783, 905
SchI	GAGTC	3 cut(s)	70, 146, 507
ScrFI	CCNGG	1 cut(s)	567
SduI	GDGCHC	3 cut(s)	637, 705, 727
SfaNI	GCATC	5 cut(s)	28, 380, 782, 916, 942
SfcI	CTRYAG	2 cut(s)	863, 969
SinI	GGWCC	3 cut(s)	196, 783, 905
SmlI	CTYRAG	1 cut(s)	515
SmoI	CTYRAG	1 cut(s)	515
Sse9I	AATT	3 cut(s)	188, 654, 731
SsiI	CCGC	1 cut(s)	642
SspI	AATATT	1 cut(s)	492
SstI	GAGCTC	1 cut(s)	727
StyD4I	CCNGG	1 cut(s)	565
TaaI	ACNGT	5 cut(s)	303, 530, 707, 813, 867
TaiI	ACGT	2 cut(s)	63, 576
TaqI	TCGA	2 cut(s)	637, 721
TasI	AATT	3 cut(s)	188, 654, 731
TatI	WGTACW	1 cut(s)	8
TfiI	GAWTC	1 cut(s)	848
Tru1I	TTAA	2 cut(s)	45, 354
Tru9I	TTAA	2 cut(s)	45, 354
TscAI	CASTG	3 cut(s)	306, 637, 710
TseFI	GTSAC	1 cut(s)	56
TseI	GCWGC	2 cut(s)	97, 968
Tsp45I	GTSAC	1 cut(s)	56
TspDTI	ATGAA	5 cut(s)	248, 285, 398, 399, 461
TspGWI	ACGGA	3 cut(s)	340, 432, 965
TspRI	CASTG	3 cut(s)	306, 637, 710
VpaK11BI	GGWCC	3 cut(s)	196, 783, 905
XapI	RAATTY	2 cut(s)	188, 654
XceI	RCATGY	1 cut(s)	1007

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.