Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0006582

Physical Location & Seq

Genomic Coordinates Forward (+)

2896971 .. 2900214

Gene Structure 3244 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1035400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 948 bp

ATGGCTCTCACTCCTGAGCTGCAAGCTCTCACCAAGGCTTTCTCAGGACTTGGAGTTGATGAGAAGGCACTGGTAGCAATATTGGGAAAATCGCACCCTGAGGAAAGGCAATCCTTCAGGAAAGCAACAACTCCCCACTTTTTCAAGGAAGATGAACGTTCCTTCGAGCGCTGGGATGATCACCATATCAAGCTTCTAAAGCATGAGTTCTTGCGTTTTAAGAATGCTGTGGTTCTATGGACAATGCATCCATGGGAAAGAGATGCTCGTTTGGCAAAGGAGGCCTTGAAGAAAGGTCCAGAATCATATGGTATTCTTGTTGAGATTGCATGCACGAGATCATCCGAGGAGCTATTAGGAGCTAGGAAGGCCTACCATTCCATCTTTGATCACTCCATTGAGGAAGATGTTGCCTACCACATTGATGGCCCTGAAGGCAAGCTCTTGGTTGCTCTTGTGAGTTCCTATAGGTATGAAGGATCAAAGGTTAAGGATGACACTGCAAAATCTGAGGCCAAAACACTTGTTAATGCCATTAAGGATGTCGATAAGAGGCACCCCAATGAAGATGATGAGGTGATCAGGATACTATCAACAAGGAGCAAGCCCCATCTCAAGGAAGTCTCTAAACACTACAAGGAAATTTCTGGCCACGACATTGATGAAGATCTTGACCATGCTGTGAGGTTAAAAGAGACGGTGCAATGCCTGTGTACTCCTGAGAAATATTTCAGCAAGGTCTTGGAAGATTCATTGAGAACTGATGTCCATAAGCATACCAAGAAAGGATTGACTAGAGTAATTGTTACCCGAGCTCACTCGGACATGATGGAGATCAAGGAGGAATTCGAGAACCATCATGGAGTCTCTTTAGTTGAGAAAATTGAAGAGATGGCTAATGGGAATTATAAGGATTTCCTACTCACATTGCTTGCAAGAGGAGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005911 GO:0006950 GO:0006970 GO:0008150 GO:0009266 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009506 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0010035 GO:0030054 GO:0033993 GO:0042221 GO:0050896 GO:0055044 GO:0097159 GO:0097305 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Annexin

Protein Analysis

316

Amino Acids

36.12

Weight (kDa)

6.35

Isoelectric Point (pI)

43.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Annexin	PF00191	87 - 152	6.5e-08	Annexin
Annexin	PF00191	183 - 227	5.1e-09	Annexin
Annexin	PF00191	261 - 310	2.1e-08	Annexin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006582)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38750 AT2G38750
fragaria_vesca	FvH4_7g02660 FvH4_7g02660 FvH4_7g02660
malus_domestica	MD02G1291200.v1.1 MD07G1035400.v1.1
prunus_persica	Prupe.2G031800_v2.0.a1
pyrus_communis	pycom02g24610 pycom07g02480
rosa_chinensis	RchiOBHm_Chr1g0321341
rosa_laevigata	RLG00000030427
rosa_multiflora	Rmu_sc0000960.1_g000008 Rmu_sc0000960.1_g000009
rosa_roxburghii	Rroxscaffold_160G00433980 Rroxscaffold_4G00327600 Rroxscaffold_4G00327810
rosa_rugosa	Rorug01G0032300 Rorug01G0033000
rosa_samantha	Rh1AG044700 Rh1BG042100 Rh1BG042900 Rh1CG047100 Rh1CG047500 Rh1DG051600
rosa_wichuraiana	Rw1G003930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	909
AccB1I	GGYRCC	1 cut(s)	555
AclI	AACGTT	1 cut(s)	157
AclWI	GGATC	1 cut(s)	487
AcoI	YGGCCR	1 cut(s)	649
AcsI	RAATTY	2 cut(s)	642, 845
AcuI	CTGAAG	2 cut(s)	100, 453
AfaI	GTAC	1 cut(s)	715
AfeI	AGCGCT	1 cut(s)	170
AfiI	CCNNNNNNNGG	1 cut(s)	616
AgsI	TTSAA	3 cut(s)	145, 289, 887
AluBI	AGCT	7 cut(s)	19, 26, 193, 352, 362, 442, 815
AluI	AGCT	7 cut(s)	19, 26, 193, 352, 362, 442, 815
Alw21I	GWGCWC	1 cut(s)	817
Alw26I	GTCTC	3 cut(s)	628, 689, 871
AlwI	GGATC	1 cut(s)	487
Ama87I	CYCGRG	1 cut(s)	810
Aor51HI	AGCGCT	1 cut(s)	170
AoxI	GGCC	5 cut(s)	282, 369, 427, 513, 649
ApeKI	GCWGC	1 cut(s)	19
ApoI	RAATTY	2 cut(s)	642, 845
Asp700I	GAANNNNTTC	1 cut(s)	728
AspLEI	GCGC	1 cut(s)	171
AspS9I	GGNCC	2 cut(s)	296, 428
AsuHPI	GGTGA	3 cut(s)	22, 173, 589
AvaI	CYCGRG	1 cut(s)	810
AvaII	GGWCC	1 cut(s)	296
AxyI	CCTNAGG	1 cut(s)	99
BalI	TGGCCA	1 cut(s)	651
BanI	GGYRCC	1 cut(s)	555
BanII	GRGCYC	1 cut(s)	817
BauI	CACGAG	1 cut(s)	334
Bbv12I	GWGCWC	1 cut(s)	817
BbvI	GCAGC	1 cut(s)	6
BccI	CCATC	6 cut(s)	389, 419, 618, 823, 864, 886
BciVI	GTATCC	1 cut(s)	579
BclI	TGATCA	3 cut(s)	178, 388, 579
BcoDI	GTCTC	3 cut(s)	628, 689, 871
BfaI	CTAG	2 cut(s)	363, 795
BfmI	CTRYAG	1 cut(s)	466
BfoI	RGCGCY	1 cut(s)	172
BfuI	GTATCC	1 cut(s)	579
BglI	GCCNNNNNGGC	1 cut(s)	435
BglII	AGATCT	1 cut(s)	667
BisI	GCNGC	1 cut(s)	20
BlsI	GCNGC	1 cut(s)	21
Bme18I	GGWCC	1 cut(s)	296
BmeT110I	CYCGRG	1 cut(s)	810
BmgT120I	GGNCC	2 cut(s)	296, 428
BmiI	GGNNCC	1 cut(s)	557
BmsI	GCATC	2 cut(s)	253, 256
Bpu10I	CCTNAGC	1 cut(s)	15
BpuEI	CTTGAG	1 cut(s)	599
BsaBI	GATNNNNATC	2 cut(s)	666, 833
BsaJI	CCNNGG	3 cut(s)	33, 251, 345
Bsc4I	CCNNNNNNNGG	1 cut(s)	616
Bse1I	ACTGG	1 cut(s)	75
Bse21I	CCTNAGG	1 cut(s)	99
Bse3DI	GCAATG	2 cut(s)	710, 926
Bse8I	GATNNNNATC	2 cut(s)	666, 833
BseDI	CCNNGG	3 cut(s)	33, 251, 345
BseGI	GGATG	5 cut(s)	181, 247, 341, 499, 547
BseJI	GATNNNNATC	2 cut(s)	666, 833
BseLI	CCNNNNNNNGG	1 cut(s)	616
BseMI	GCAATG	2 cut(s)	710, 926
BseMII	CTCAG	5 cut(s)	6, 57, 90, 501, 711
BseNI	ACTGG	1 cut(s)	75
BseRI	GAGGAG	1 cut(s)	362
BseXI	GCAGC	1 cut(s)	6
BseYI	CCCAGC	1 cut(s)	171
BshFI	GGCC	5 cut(s)	284, 371, 429, 515, 651
BshNI	GGYRCC	1 cut(s)	555
BsiHKAI	GWGCWC	1 cut(s)	817
BsiHKCI	CYCGRG	1 cut(s)	810
BslI	CCNNNNNNNGG	1 cut(s)	616
BsmAI	GTCTC	3 cut(s)	628, 689, 871
BsmBI	CGTCTC	1 cut(s)	689
BsmI	GAATGC	1 cut(s)	229
BsnI	GGCC	5 cut(s)	284, 371, 429, 515, 651
BsoBI	CYCGRG	1 cut(s)	810
Bsp1286I	GDGCHC	1 cut(s)	817
Bsp143I	GATC	7 cut(s)	178, 338, 388, 479, 579, 667, 834
Bsp19I	CCATGG	1 cut(s)	251
BspANI	GGCC	5 cut(s)	284, 371, 429, 515, 651
BspCNI	CTCAG	5 cut(s)	7, 56, 91, 502, 712
BspLI	GGNNCC	1 cut(s)	557
BspPI	GGATC	1 cut(s)	487
BspT107I	GGYRCC	1 cut(s)	555
BsrDI	GCAATG	2 cut(s)	710, 926
BsrI	ACTGG	1 cut(s)	75
BssECI	CCNNGG	3 cut(s)	33, 251, 345
BssMI	GATC	7 cut(s)	178, 338, 388, 479, 579, 667, 834
BssSI	CACGAG	1 cut(s)	334
BssT1I	CCWWGG	2 cut(s)	33, 251
Bst2BI	CACGAG	1 cut(s)	334
Bst4CI	ACNGT	1 cut(s)	700
Bst6I	CTCTTC	1 cut(s)	882
BstC8I	GCNNGC	5 cut(s)	24, 331, 440, 605, 933
BstDEI	CTNAG	5 cut(s)	15, 43, 99, 510, 720
BstDSI	CCRYGG	1 cut(s)	251
BstF5I	GGATG	5 cut(s)	181, 247, 341, 499, 547
BstH2I	RGCGCY	1 cut(s)	172
BstHHI	GCGC	1 cut(s)	171
BstKTI	GATC	7 cut(s)	181, 341, 391, 482, 582, 670, 837
BstMAI	GTCTC	3 cut(s)	628, 689, 871
BstMBI	GATC	7 cut(s)	178, 338, 388, 479, 579, 667, 834
BstMWI	GCNNNNNNNGC	6 cut(s)	74, 199, 272, 281, 368, 435
BstNSI	RCATGY	1 cut(s)	333
BstSFI	CTRYAG	1 cut(s)	466
BstV1I	GCAGC	1 cut(s)	6
BstX2I	RGATCY	1 cut(s)	667
BstXI	CCANNNNNNTGG	1 cut(s)	425
BstYI	RGATCY	1 cut(s)	667
Bsu36I	CCTNAGG	1 cut(s)	99
BsuI	GTATCC	1 cut(s)	579
BsuRI	GGCC	5 cut(s)	284, 371, 429, 515, 651
BtgI	CCRYGG	1 cut(s)	251
BtsCI	GGATG	5 cut(s)	181, 247, 341, 499, 547
BtsI	GCAGTG	1 cut(s)	498
BtsIMutI	CAGTG	2 cut(s)	68, 498
Cac8I	GCNNGC	5 cut(s)	24, 331, 440, 605, 933
CfoI	GCGC	1 cut(s)	171
Cfr13I	GGNCC	2 cut(s)	296, 428
Csp6I	GTAC	1 cut(s)	714
CviAII	CATG	6 cut(s)	203, 252, 330, 677, 826, 860
CviQI	GTAC	1 cut(s)	714
DdeI	CTNAG	5 cut(s)	15, 43, 99, 510, 720
DpnI	GATC	7 cut(s)	180, 340, 390, 481, 581, 669, 836
DpnII	GATC	7 cut(s)	178, 338, 388, 479, 579, 667, 834
EaeI	YGGCCR	1 cut(s)	649
Eam1104I	CTCTTC	1 cut(s)	882
EarI	CTCTTC	1 cut(s)	882
Ecl136II	GAGCTC	1 cut(s)	815
Eco130I	CCWWGG	2 cut(s)	33, 251
Eco147I	AGGCCT	2 cut(s)	284, 371
Eco24I	GRGCYC	1 cut(s)	817
Eco47I	GGWCC	1 cut(s)	296
Eco47III	AGCGCT	1 cut(s)	170
Eco53kI	GAGCTC	1 cut(s)	815
Eco57I	CTGAAG	2 cut(s)	100, 453
Eco81I	CCTNAGG	1 cut(s)	99
Eco88I	CYCGRG	1 cut(s)	810
EcoICRI	GAGCTC	1 cut(s)	815
EcoRI	GAATTC	1 cut(s)	845
EcoT14I	CCWWGG	2 cut(s)	33, 251
EcoT22I	ATGCAT	1 cut(s)	249
EcoT38I	GRGCYC	1 cut(s)	817
ErhI	CCWWGG	2 cut(s)	33, 251
Esp3I	CGTCTC	1 cut(s)	689
FaeI	CATG	6 cut(s)	206, 255, 333, 680, 829, 863
FalI	AAGNNNNNCTT	2 cut(s)	269, 301
FatI	CATG	6 cut(s)	202, 251, 329, 676, 825, 859
FauNDI	CATATG	1 cut(s)	307
FbaI	TGATCA	3 cut(s)	178, 388, 579
Fnu4HI	GCNGC	1 cut(s)	20
FokI	GGATG	5 cut(s)	188, 234, 328, 506, 554
FriOI	GRGCYC	1 cut(s)	817
Fsp4HI	GCNGC	1 cut(s)	20
FspBI	CTAG	2 cut(s)	363, 795
GlaI	GCGC	1 cut(s)	170
GluI	GCNGC	1 cut(s)	20
GsaI	CCCAGC	1 cut(s)	175
HaeII	RGCGCY	1 cut(s)	172
HaeIII	GGCC	5 cut(s)	284, 371, 429, 515, 651
HhaI	GCGC	1 cut(s)	171
Hin1II	CATG	6 cut(s)	206, 255, 333, 680, 829, 863
Hin6I	GCGC	1 cut(s)	169
HinP1I	GCGC	1 cut(s)	169
HindIII	AAGCTT	1 cut(s)	191
HinfI	GANTC	3 cut(s)	302, 749, 864
HphI	GGTGA	3 cut(s)	22, 173, 589
Hpy166II	GTNNAC	1 cut(s)	714
Hpy188I	TCNGA	3 cut(s)	346, 511, 823
Hpy188III	TCNNGA	8 cut(s)	14, 45, 118, 299, 583, 671, 719, 850
Hpy8I	GTNNAC	1 cut(s)	714
HpyAV	CCTTC	6 cut(s)	58, 124, 172, 361, 428, 470
HpyCH4III	ACNGT	1 cut(s)	700
HpyCH4IV	ACGT	1 cut(s)	157
HpyCH4V	TGCA	7 cut(s)	22, 247, 329, 333, 503, 703, 935
HpyF10VI	GCNNNNNNNGC	6 cut(s)	74, 199, 272, 281, 368, 435
HpyF3I	CTNAG	5 cut(s)	15, 43, 99, 510, 720
HpySE526I	ACGT	1 cut(s)	157
Hsp92II	CATG	6 cut(s)	206, 255, 333, 680, 829, 863
HspAI	GCGC	1 cut(s)	169
Ksp22I	TGATCA	3 cut(s)	178, 388, 579
Kzo9I	GATC	7 cut(s)	178, 338, 388, 479, 579, 667, 834
LmnI	GCTCC	3 cut(s)	349, 359, 600
Lsp1109I	GCAGC	1 cut(s)	6
LweI	GCATC	2 cut(s)	253, 256
MaeI	CTAG	2 cut(s)	363, 795
MaeII	ACGT	1 cut(s)	157
MaeIII	GTNAC	1 cut(s)	805
MalI	GATC	7 cut(s)	180, 340, 390, 481, 581, 669, 836
MboI	GATC	7 cut(s)	178, 338, 388, 479, 579, 667, 834
MboII	GAAGA	7 cut(s)	161, 301, 416, 578, 677, 758, 899
MflI	RGATCY	1 cut(s)	667
MhlI	GDGCHC	1 cut(s)	817
MlsI	TGGCCA	1 cut(s)	651
MluCI	AATT	5 cut(s)	642, 801, 845, 882, 904
MluNI	TGGCCA	1 cut(s)	651
MlyI	GAGTC	1 cut(s)	873
Mox20I	TGGCCA	1 cut(s)	651
Mph1103I	ATGCAT	1 cut(s)	249
MroXI	GAANNNNTTC	1 cut(s)	728
MscI	TGGCCA	1 cut(s)	651
MseI	TTAA	5 cut(s)	219, 489, 528, 537, 689
MslI	CAYNNNNRTG	2 cut(s)	423, 561
Msp20I	TGGCCA	1 cut(s)	651
Mva1269I	GAATGC	1 cut(s)	229
MwoI	GCNNNNNNNGC	6 cut(s)	74, 199, 272, 281, 368, 435
NcoI	CCATGG	1 cut(s)	251
NdeI	CATATG	1 cut(s)	307
NdeII	GATC	7 cut(s)	178, 338, 388, 479, 579, 667, 834
NlaIII	CATG	6 cut(s)	206, 255, 333, 680, 829, 863
NlaIV	GGNNCC	1 cut(s)	557
NsiI	ATGCAT	1 cut(s)	249
NspI	RCATGY	1 cut(s)	333
PaeI	GCATGC	1 cut(s)	333
PceI	AGGCCT	2 cut(s)	284, 371
PctI	GAATGC	1 cut(s)	229
PdmI	GAANNNNTTC	1 cut(s)	728
PfeI	GAWTC	2 cut(s)	302, 749
PkrI	GCNGC	1 cut(s)	21
PleI	GAGTC	1 cut(s)	872
PpsI	GAGTC	1 cut(s)	872
PsiI	TTATAA	1 cut(s)	909
Psp124BI	GAGCTC	1 cut(s)	817
Psp1406I	AACGTT	1 cut(s)	157
PspFI	CCCAGC	1 cut(s)	171
PspN4I	GGNNCC	1 cut(s)	557
PspPI	GGNCC	2 cut(s)	296, 428
PsuI	RGATCY	1 cut(s)	667
RsaI	GTAC	1 cut(s)	715
RsaNI	GTAC	1 cut(s)	714
RseI	CAYNNNNRTG	2 cut(s)	423, 561
SacI	GAGCTC	1 cut(s)	817
SaqAI	TTAA	5 cut(s)	219, 489, 528, 537, 689
SatI	GCNGC	1 cut(s)	20
Sau3AI	GATC	7 cut(s)	178, 338, 388, 479, 579, 667, 834
Sau96I	GGNCC	2 cut(s)	296, 428
SchI	GAGTC	1 cut(s)	873
SduI	GDGCHC	1 cut(s)	817
SfaNI	GCATC	2 cut(s)	253, 256
SfcI	CTRYAG	1 cut(s)	466
SinI	GGWCC	1 cut(s)	296
SmiMI	CAYNNNNRTG	2 cut(s)	423, 561
SmlI	CTYRAG	1 cut(s)	614
SmoI	CTYRAG	1 cut(s)	614
SphI	GCATGC	1 cut(s)	333
Sse9I	AATT	5 cut(s)	642, 801, 845, 882, 904
SseBI	AGGCCT	2 cut(s)	284, 371
SspI	AATATT	2 cut(s)	81, 728
SspMI	CTAG	2 cut(s)	363, 795
SstI	GAGCTC	1 cut(s)	817
StuI	AGGCCT	2 cut(s)	284, 371
StyI	CCWWGG	2 cut(s)	33, 251
TaaI	ACNGT	1 cut(s)	700
TaiI	ACGT	1 cut(s)	160
TaqI	TCGA	3 cut(s)	165, 546, 849
TasI	AATT	5 cut(s)	642, 801, 845, 882, 904
TatI	WGTACW	1 cut(s)	713
TfiI	GAWTC	2 cut(s)	302, 749
Tru1I	TTAA	5 cut(s)	219, 489, 528, 537, 689
Tru9I	TTAA	5 cut(s)	219, 489, 528, 537, 689
TscAI	CASTG	2 cut(s)	75, 505
TseI	GCWGC	1 cut(s)	19
TspDTI	ATGAA	5 cut(s)	168, 489, 579, 678, 741
TspRI	CASTG	2 cut(s)	75, 505
VpaK11BI	GGWCC	1 cut(s)	296
XapI	RAATTY	2 cut(s)	642, 845
XceI	RCATGY	1 cut(s)	333
XmnI	GAANNNNTTC	1 cut(s)	728
XspI	CTAG	2 cut(s)	363, 795
Zsp2I	ATGCAT	1 cut(s)	249

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.