Rorug01G0033000

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0003398
Physical Location & Seq
Reverse (-)
5596566 .. 5600922
4357 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0033000.1

Sequence Viewer

Length: 1614 bp
ATGAGGCATCCACCAGTTCACCTTCTGAAACAAATGAACATTTTTATCATAAAAAGCTTCATGATCTTGTTTCTGAGCTCTGTAACTGTTAGAGTGAACCTTTGTTCTCCAAATACGCCTTCATTAAACACACTTCCACTTGAAGGTCATTTCAACTTTCACCAAGTTCAGCATGCAGCCCGAGATTTTGGCAACAGGTACCAGTTCCTCCCTATGGCAGTACTACATCCAAAAACGGTTTCGGACATAGCCACTTTAATCAAGCATATTTGGGATATTGGTCCTCGTTCAGAGCTCACAGCTGCTGCTAGAGGCCATGGCCACTCACTCCAGGGTCAGTCACAAGCCCACGGAGGAGTTGTCGTCAATATGGAATCACTTAAGGGGCCCGAAATCCAGGTTTACACTGGAAATTTTCCTTACGCAGATGTCTCTGGTGGTGAGTTGTGGATAAATATCCTGCATGAAAGCTTGAAATATGGGTTAGCACCAAAATCATGGACAGACTACCTACATCTAACTGTTGGTGGTACTCTGTCTAATGCTGGGATCAGTGGGCAGGCATTCCGACATGGCCCCCAGATCAGCAATGTCCGCCAGCTGGAAGTTGTTACAGGAAAAGGGGAGATTGTAACTTGTTCAGAGAAGCAGAATGACGACCTATTTCATGCTGTTCTTGGAGGACTTGGTCAGTTTGGCATCATAACCCGGGCAAGAATATTGTTGGAAGCAGCACCTGCAAGGGTAAAATGGATTAGAGTGCTGTATTCAGATTTCACAGCATTTACCCGAGATCAGGAGCATCTAATATCTGGCGAAAATACATTTAATTACATCGAAGGATTTGTCATAATAAACAGGAGTGGTCTGCTGAACAGTTGGAGATCATCTTTCAATCCAAAAGACCCAGTTCAGGCCAGCCAGTTCAAGTCAGATGGAAGAACTCTATTCTGCCTAGAAATGGCCAAATACTTCAACCTGGACAAGATCGATGTAATAAATAAGGAAGTTGACAAGTCATTGTCTGAATTGAGCTACATCCCTTCCATGCTATTTGAGTCAGAAGTTACATACACAGATTTCTTGGACAGGGTACATATATCTGAGATGAAACTACGCTCAAAAGATCTGTGGGATGTTCCACACCCATGGCTCAATCTTCTTATACCAAAAAGCAAAATTCATACTTTTGCTCGAGGAGTGTTTGGCAACATCCATACAGAAACAAGCAATGGCCCCATCCTCATCTATCCAGTTAACAGATCAAAGTGGGACAACAGAACTTCCGTAGTTATACCGGAGGAACATATTTTTTACTTAGTGGCATTCCTTACCTCTGCAGTTCCCTCTTCAACTGGAACTGATGGTTTAGAACACATCTTAATTCAGAACAAAAGAATTCTAGAATTCTGTGAAACAGCCAATCTTGGGGTCAAGCAATATCTACCGCATTACACCAAACAAGAAGAATGGCAGGCCCACTTTGGCCCCCACTGGGAAAAATTTGTGCAAAGAAAATCTACTTATGACCCTTTGGCAATACTTGCTCCAGGACAGAGAATATTTCAAAAGGCAATACCCTTCTCATCACAGTCGCCATCTAGTATAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0000976 GO:0000977 GO:0001012 GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006355 GO:0006357 GO:0006873 GO:0006875 GO:0006879 GO:0006950 GO:0006979 GO:0007154 GO:0008150 GO:0009267 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0010104 GO:0010106 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0019219 GO:0019222 GO:0019725 GO:0023051 GO:0030003 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031667 GO:0031668 GO:0031669 GO:0032991 GO:0033554 GO:0034248 GO:0034250 GO:0042221 GO:0042493 GO:0042592 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043455 GO:0043565 GO:0044212 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044798 GO:0045893 GO:0045935 GO:0046685 GO:0046686 GO:0046916 GO:0048518 GO:0048522 GO:0048583 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051171 GO:0051173 GO:0051193 GO:0051194 GO:0051252 GO:0051254 GO:0051716 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0060255 GO:0065007 GO:0065008 GO:0070297 GO:0071496 GO:0071731 GO:0080090 GO:0090575 GO:0097159 GO:0097366 GO:0098771 GO:0140110 GO:1900376 GO:1900378 GO:1900704 GO:1900706 GO:1901363 GO:1901698 GO:1901700 GO:1902531 GO:1902680 GO:1903506 GO:1903508 GO:1990641 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HLH

Protein Analysis

537

Amino Acids

60.61

Weight (kDa)

8.46

Isoelectric Point (pI)

41.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_4 PF01565 71 - 214 8.6e-17 FAD binding domain
Cytokin-bind PF09265 246 - 522 7.4e-120 Cytokinin dehydrogenase 1, FAD and cytokinin binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 745
Acc36I ACCTGC 1 cut(s) 745
Acc65I GGTACC 1 cut(s) 198
AccB1I GGYRCC 1 cut(s) 198
AciI CCGC 2 cut(s) 595, 1448
AclWI GGATC 1 cut(s) 557
AcoI YGGCCR 2 cut(s) 319, 963
AcsI RAATTY 5 cut(s) 412, 1179, 1398, 1406, 1502
AfaI GTAC 4 cut(s) 200, 222, 532, 1095
AfiI CCNNNNNNNGG 8 cut(s) 143, 214, 601, 796, 913, 961, 1428, 1495
AflII CTTAAG 1 cut(s) 380
AgsI TTSAA 8 cut(s) 143, 154, 475, 895, 928, 976, 1353, 1568
AjnI CCWGG 4 cut(s) 330, 396, 978, 1549
AjuI GAANNNNNNNTTGG 4 cut(s) 103, 135, 223, 255
AluBI AGCT 7 cut(s) 57, 78, 295, 302, 471, 601, 1035
AluI AGCT 7 cut(s) 57, 78, 295, 302, 471, 601, 1035
Alw21I GWGCWC 2 cut(s) 80, 297
Alw26I GTCTC 1 cut(s) 436
AlwI GGATC 1 cut(s) 557
AlwNI CAGNNNCTG 2 cut(s) 305, 737
Ama87I CYCGRG 4 cut(s) 180, 708, 789, 1194
AoxI GGCC 9 cut(s) 313, 319, 386, 574, 915, 963, 1234, 1476, 1486
ApaI GGGCCC 1 cut(s) 390
ApeKI GCWGC 4 cut(s) 176, 302, 305, 731
ApoI RAATTY 5 cut(s) 412, 1179, 1398, 1406, 1502
ArsI GACNNNNNNTTYG 2 cut(s) 831, 863
Asp718I GGTACC 1 cut(s) 198
AspS9I GGNCC 7 cut(s) 281, 386, 387, 575, 1235, 1477, 1487
AsuC2I CCSGG 2 cut(s) 709, 710
AsuHPI GGTGA 3 cut(s) 11, 152, 452
AvaI CYCGRG 4 cut(s) 180, 708, 789, 1194
AvaII GGWCC 1 cut(s) 281
BaeGI GKGCMC 1 cut(s) 390
BalI TGGCCA 2 cut(s) 321, 965
BanI GGYRCC 1 cut(s) 198
BanII GRGCYC 3 cut(s) 80, 297, 390
Bbv12I GWGCWC 2 cut(s) 80, 297
BbvI GCAGC 4 cut(s) 188, 289, 292, 743
BccI CCATC 4 cut(s) 929, 1247, 1358, 1606
BciT130I CCWGG 4 cut(s) 332, 398, 980, 1551
BcnI CCSGG 2 cut(s) 709, 710
BcoDI GTCTC 1 cut(s) 436
BfaI CTAG 4 cut(s) 309, 956, 1403, 1602
BfmI CTRYAG 1 cut(s) 1338
BfrI CTTAAG 1 cut(s) 380
BfuAI ACCTGC 1 cut(s) 745
BglII AGATCT 1 cut(s) 1126
BisI GCNGC 4 cut(s) 177, 303, 306, 732
BlsI GCNGC 4 cut(s) 178, 304, 307, 733
BmcAI AGTACT 1 cut(s) 222
Bme1390I CCNGG 6 cut(s) 332, 398, 709, 710, 980, 1551
Bme18I GGWCC 1 cut(s) 281
BmeT110I CYCGRG 4 cut(s) 180, 708, 789, 1194
BmgT120I GGNCC 7 cut(s) 281, 386, 387, 575, 1235, 1477, 1487
BmiI GGNNCC 6 cut(s) 200, 387, 388, 577, 1237, 1489
BmrFI CCNGG 6 cut(s) 332, 398, 709, 710, 980, 1551
BmrI ACTGGG 2 cut(s) 902, 1504
BmsI GCATC 3 cut(s) 16, 708, 811
BmuI ACTGGG 2 cut(s) 902, 1504
BpmI CTGGAG 2 cut(s) 314, 1533
BpuMI CCSGG 2 cut(s) 709, 710
Bsa29I ATCGAT 1 cut(s) 990
BsaBI GATNNNNATC 1 cut(s) 455
BsaJI CCNNGG 5 cut(s) 316, 331, 349, 708, 1148
BsaWI WCCGGW 1 cut(s) 1297
BsaXI ACNNNNNCTCC 4 cut(s) 345, 348, 375, 378
Bsc4I CCNNNNNNNGG 8 cut(s) 143, 214, 601, 796, 913, 961, 1428, 1495
Bse1I ACTGG 8 cut(s) 14, 202, 412, 908, 922, 1253, 1360, 1499
Bse3DI GCAATG 2 cut(s) 595, 1237
Bse8I GATNNNNATC 1 cut(s) 455
BseBI CCWGG 4 cut(s) 332, 398, 980, 1551
BseCI ATCGAT 1 cut(s) 990
BseDI CCNNGG 5 cut(s) 316, 331, 349, 708, 1148
BseGI GGATG 6 cut(s) 7, 226, 1038, 1141, 1212, 1239
BseJI GATNNNNATC 1 cut(s) 455
BseLI CCNNNNNNNGG 8 cut(s) 143, 214, 601, 796, 913, 961, 1428, 1495
BseMI GCAATG 2 cut(s) 595, 1237
BseMII CTCAG 2 cut(s) 65, 1095
BseNI ACTGG 8 cut(s) 14, 202, 412, 908, 922, 1253, 1360, 1499
BseRI GAGGAG 2 cut(s) 369, 1212
BseSI GKGCMC 1 cut(s) 390
BseXI GCAGC 4 cut(s) 188, 289, 292, 743
BseYI CCCAGC 1 cut(s) 545
BshFI GGCC 9 cut(s) 315, 321, 388, 576, 917, 965, 1236, 1478, 1488
BshNI GGYRCC 1 cut(s) 198
BshVI ATCGAT 1 cut(s) 990
BsiHKAI GWGCWC 2 cut(s) 80, 297
BsiHKCI CYCGRG 4 cut(s) 180, 708, 789, 1194
BsiSI CCGG 2 cut(s) 709, 1298
BslFI GGGAC 1 cut(s) 1286
BslI CCNNNNNNNGG 8 cut(s) 143, 214, 601, 796, 913, 961, 1428, 1495
BsmAI GTCTC 1 cut(s) 436
BsmFI GGGAC 1 cut(s) 1286
BsmI GAATGC 2 cut(s) 563, 1325
BsnI GGCC 9 cut(s) 315, 321, 388, 576, 917, 965, 1236, 1478, 1488
BsoBI CYCGRG 4 cut(s) 180, 708, 789, 1194
Bsp120I GGGCCC 1 cut(s) 386
Bsp1286I GDGCHC 3 cut(s) 80, 297, 390
Bsp143I GATC 8 cut(s) 63, 549, 582, 793, 884, 987, 1126, 1262
Bsp19I CCATGG 2 cut(s) 316, 1148
BspACI CCGC 2 cut(s) 595, 1448
BspANI GGCC 9 cut(s) 315, 321, 388, 576, 917, 965, 1236, 1478, 1488
BspCNI CTCAG 2 cut(s) 66, 1096
BspDI ATCGAT 1 cut(s) 990
BspHI TCATGA 1 cut(s) 60
BspLI GGNNCC 6 cut(s) 200, 387, 388, 577, 1237, 1489
BspMAI CTGCAG 1 cut(s) 1342
BspMI ACCTGC 1 cut(s) 745
BspPI GGATC 1 cut(s) 557
BspT107I GGYRCC 1 cut(s) 198
BspTI CTTAAG 1 cut(s) 380
BsrDI GCAATG 2 cut(s) 595, 1237
BsrI ACTGG 8 cut(s) 14, 202, 412, 908, 922, 1253, 1360, 1499
BssECI CCNNGG 5 cut(s) 316, 331, 349, 708, 1148
BssMI GATC 8 cut(s) 63, 549, 582, 793, 884, 987, 1126, 1262
BssT1I CCWWGG 2 cut(s) 316, 1148
Bst2UI CCWGG 4 cut(s) 332, 398, 980, 1551
Bst4CI ACNGT 5 cut(s) 88, 238, 523, 878, 1593
Bst6I CTCTTC 1 cut(s) 1354
BstAFI CTTAAG 1 cut(s) 380
BstAPI GCANNNNNTGC 2 cut(s) 737, 1544
BstC8I GCNNGC 5 cut(s) 174, 561, 599, 919, 1476
BstDEI CTNAG 3 cut(s) 74, 1104, 1318
BstDSI CCRYGG 3 cut(s) 316, 349, 1148
BstF5I GGATG 6 cut(s) 7, 226, 1038, 1141, 1212, 1239
BstKTI GATC 8 cut(s) 66, 552, 585, 796, 887, 990, 1129, 1265
BstMAI GTCTC 1 cut(s) 436
BstMBI GATC 8 cut(s) 63, 549, 582, 793, 884, 987, 1126, 1262
BstMWI GCNNNNNNNGC 3 cut(s) 594, 737, 1544
BstNI CCWGG 4 cut(s) 332, 398, 980, 1551
BstNSI RCATGY 1 cut(s) 176
BstSCI CCNGG 6 cut(s) 330, 396, 707, 708, 978, 1549
BstSFI CTRYAG 1 cut(s) 1338
BstSLI GKGCMC 1 cut(s) 390
BstV1I GCAGC 4 cut(s) 188, 289, 292, 743
BstX2I RGATCY 1 cut(s) 1126
BstXI CCANNNNNNTGG 2 cut(s) 498, 1149
BstYI RGATCY 1 cut(s) 1126
Bsu15I ATCGAT 1 cut(s) 990
BsuRI GGCC 9 cut(s) 315, 321, 388, 576, 917, 965, 1236, 1478, 1488
BsuTUI ATCGAT 1 cut(s) 990
BtgI CCRYGG 3 cut(s) 316, 349, 1148
BtsCI GGATG 6 cut(s) 7, 226, 1038, 1141, 1212, 1239
BtsIMutI CAGTG 3 cut(s) 405, 559, 1492
BveI ACCTGC 1 cut(s) 745
Cac8I GCNNGC 5 cut(s) 174, 561, 599, 919, 1476
CaiI CAGNNNCTG 2 cut(s) 305, 737
CciI TCATGA 1 cut(s) 60
Cfr13I GGNCC 7 cut(s) 281, 386, 387, 575, 1235, 1477, 1487
Cfr9I CCCGGG 1 cut(s) 708
ClaI ATCGAT 1 cut(s) 990
Csp6I GTAC 4 cut(s) 199, 221, 531, 1094
CviAII CATG 9 cut(s) 61, 173, 317, 464, 498, 572, 668, 1048, 1149
CviQI GTAC 4 cut(s) 199, 221, 531, 1094
DdeI CTNAG 3 cut(s) 74, 1104, 1318
DpnI GATC 8 cut(s) 65, 551, 584, 795, 886, 989, 1128, 1264
DpnII GATC 8 cut(s) 63, 549, 582, 793, 884, 987, 1126, 1262
EaeI YGGCCR 2 cut(s) 319, 963
Eam1104I CTCTTC 1 cut(s) 1354
EarI CTCTTC 1 cut(s) 1354
EciI GGCGGA 1 cut(s) 584
Ecl136II GAGCTC 2 cut(s) 78, 295
Eco130I CCWWGG 2 cut(s) 316, 1148
Eco24I GRGCYC 3 cut(s) 80, 297, 390
Eco47I GGWCC 1 cut(s) 281
Eco53kI GAGCTC 2 cut(s) 78, 295
Eco88I CYCGRG 4 cut(s) 180, 708, 789, 1194
EcoICRI GAGCTC 2 cut(s) 78, 295
EcoO109I RGGNCCY 1 cut(s) 386
EcoRI GAATTC 2 cut(s) 1398, 1406
EcoRII CCWGG 4 cut(s) 330, 396, 978, 1549
EcoT14I CCWWGG 2 cut(s) 316, 1148
EcoT38I GRGCYC 3 cut(s) 80, 297, 390
ErhI CCWWGG 2 cut(s) 316, 1148
FaeI CATG 9 cut(s) 64, 176, 320, 467, 501, 575, 671, 1051, 1152
FaqI GGGAC 1 cut(s) 1286
FatI CATG 9 cut(s) 60, 172, 316, 463, 497, 571, 667, 1047, 1148
Fnu4HI GCNGC 4 cut(s) 177, 303, 306, 732
FokI GGATG 5 cut(s) 213, 1025, 1148, 1199, 1226
FriOI GRGCYC 3 cut(s) 80, 297, 390
Fsp4HI GCNGC 4 cut(s) 177, 303, 306, 732
FspBI CTAG 4 cut(s) 309, 956, 1403, 1602
GluI GCNGC 4 cut(s) 177, 303, 306, 732
GsaI CCCAGC 1 cut(s) 549
GsuI CTGGAG 2 cut(s) 314, 1533
HaeIII GGCC 9 cut(s) 315, 321, 388, 576, 917, 965, 1236, 1478, 1488
HapII CCGG 2 cut(s) 709, 1298
Hin1II CATG 9 cut(s) 64, 176, 320, 467, 501, 575, 671, 1051, 1152
HincII GTYRAC 2 cut(s) 1012, 1258
HindII GTYRAC 2 cut(s) 1012, 1258
HindIII AAGCTT 2 cut(s) 55, 469
HinfI GANTC 2 cut(s) 374, 1058
HpaI GTTAAC 1 cut(s) 1258
HpaII CCGG 2 cut(s) 709, 1298
HphI GGTGA 3 cut(s) 11, 152, 452
Hpy166II GTNNAC 5 cut(s) 19, 97, 403, 1012, 1258
Hpy188III TCNNGA 3 cut(s) 61, 797, 1403
Hpy8I GTNNAC 5 cut(s) 19, 97, 403, 1012, 1258
HpyAV CCTTC 6 cut(s) 32, 129, 137, 833, 1053, 1591
HpyCH4III ACNGT 5 cut(s) 88, 238, 523, 878, 1593
HpyCH4V TGCA 5 cut(s) 176, 463, 740, 1340, 1510
HpyF10VI GCNNNNNNNGC 3 cut(s) 594, 737, 1544
HpyF3I CTNAG 3 cut(s) 74, 1104, 1318
Hsp92II CATG 9 cut(s) 64, 176, 320, 467, 501, 575, 671, 1051, 1152
KpnI GGTACC 1 cut(s) 202
KspAI GTTAAC 1 cut(s) 1258
Kzo9I GATC 8 cut(s) 63, 549, 582, 793, 884, 987, 1126, 1262
LmnI GCTCC 2 cut(s) 799, 1552
Lsp1109I GCAGC 4 cut(s) 188, 289, 292, 743
LweI GCATC 3 cut(s) 16, 708, 811
MaeI CTAG 4 cut(s) 309, 956, 1403, 1602
MaeIII GTNAC 5 cut(s) 82, 339, 610, 631, 1066
MalI GATC 8 cut(s) 65, 551, 584, 795, 886, 989, 1128, 1264
MboI GATC 8 cut(s) 63, 549, 582, 793, 884, 987, 1126, 1262
MboII GAAGA 4 cut(s) 951, 1151, 1341, 1478
MflI RGATCY 1 cut(s) 1126
MhlI GDGCHC 3 cut(s) 80, 297, 390
MlsI TGGCCA 2 cut(s) 321, 965
MluCI AATT 8 cut(s) 412, 829, 1028, 1179, 1383, 1398, 1406, 1502
MluNI TGGCCA 2 cut(s) 321, 965
MlyI GAGTC 1 cut(s) 1067
MmeI TCCRAC 3 cut(s) 592, 705, 860
Mox20I TGGCCA 2 cut(s) 321, 965
MscI TGGCCA 2 cut(s) 321, 965
MseI TTAA 6 cut(s) 125, 257, 381, 828, 1257, 1382
MslI CAYNNNNRTG 1 cut(s) 1147
Msp20I TGGCCA 2 cut(s) 321, 965
MspA1I CMGCKG 2 cut(s) 302, 601
MspCI CTTAAG 1 cut(s) 380
MspI CCGG 2 cut(s) 709, 1298
MspR9I CCNGG 6 cut(s) 332, 398, 709, 710, 980, 1551
Mva1269I GAATGC 2 cut(s) 563, 1325
MvaI CCWGG 4 cut(s) 332, 398, 980, 1551
MwoI GCNNNNNNNGC 3 cut(s) 594, 737, 1544
NciI CCSGG 2 cut(s) 709, 710
NcoI CCATGG 2 cut(s) 316, 1148
NdeII GATC 8 cut(s) 63, 549, 582, 793, 884, 987, 1126, 1262
NlaIII CATG 9 cut(s) 64, 176, 320, 467, 501, 575, 671, 1051, 1152
NlaIV GGNNCC 6 cut(s) 200, 387, 388, 577, 1237, 1489
NmuCI GTSAC 1 cut(s) 339
NspI RCATGY 1 cut(s) 176
PaeI GCATGC 1 cut(s) 176
PaeR7I CTCGAG 1 cut(s) 1194
PagI TCATGA 1 cut(s) 60
PaqCI CACCTGC 1 cut(s) 745
PctI GAATGC 2 cut(s) 563, 1325
PfeI GAWTC 1 cut(s) 374
PflFI GACNNNGTC 1 cut(s) 687
PfoI TCCNGGA 1 cut(s) 1549
PkrI GCNGC 4 cut(s) 178, 304, 307, 733
PleI GAGTC 1 cut(s) 1066
PpsI GAGTC 1 cut(s) 1066
Psp124BI GAGCTC 2 cut(s) 80, 297
Psp6I CCWGG 4 cut(s) 330, 396, 978, 1549
PspFI CCCAGC 1 cut(s) 545
PspGI CCWGG 4 cut(s) 330, 396, 978, 1549
PspN4I GGNNCC 6 cut(s) 200, 387, 388, 577, 1237, 1489
PspOMI GGGCCC 1 cut(s) 386
PspPI GGNCC 7 cut(s) 281, 386, 387, 575, 1235, 1477, 1487
PspXI VCTCGAGB 1 cut(s) 1194
PstI CTGCAG 1 cut(s) 1342
PstNI CAGNNNCTG 2 cut(s) 305, 737
PsuI RGATCY 1 cut(s) 1126
PsyI GACNNNGTC 1 cut(s) 687
PvuII CAGCTG 2 cut(s) 302, 601
RsaI GTAC 4 cut(s) 200, 222, 532, 1095
RsaNI GTAC 4 cut(s) 199, 221, 531, 1094
RseI CAYNNNNRTG 1 cut(s) 1147
SacI GAGCTC 2 cut(s) 80, 297
SaqAI TTAA 6 cut(s) 125, 257, 381, 828, 1257, 1382
SatI GCNGC 4 cut(s) 177, 303, 306, 732
Sau3AI GATC 8 cut(s) 63, 549, 582, 793, 884, 987, 1126, 1262
Sau96I GGNCC 7 cut(s) 281, 386, 387, 575, 1235, 1477, 1487
ScaI AGTACT 1 cut(s) 222
SchI GAGTC 1 cut(s) 1067
ScrFI CCNGG 6 cut(s) 332, 398, 709, 710, 980, 1551
SduI GDGCHC 3 cut(s) 80, 297, 390
SfaNI GCATC 3 cut(s) 16, 708, 811
SfcI CTRYAG 1 cut(s) 1338
Sfr274I CTCGAG 1 cut(s) 1194
SinI GGWCC 1 cut(s) 281
SlaI CTCGAG 1 cut(s) 1194
SmaI CCCGGG 1 cut(s) 710
SmiMI CAYNNNNRTG 1 cut(s) 1147
SmlI CTYRAG 2 cut(s) 380, 1194
SmoI CTYRAG 2 cut(s) 380, 1194
SphI GCATGC 1 cut(s) 176
Sse9I AATT 8 cut(s) 412, 829, 1028, 1179, 1383, 1398, 1406, 1502
SsiI CCGC 2 cut(s) 595, 1448
SspI AATATT 2 cut(s) 720, 1563
SspMI CTAG 4 cut(s) 309, 956, 1403, 1602
SstI GAGCTC 2 cut(s) 80, 297
StyD4I CCNGG 6 cut(s) 330, 396, 707, 708, 978, 1549
StyI CCWWGG 2 cut(s) 316, 1148
TaaI ACNGT 5 cut(s) 88, 238, 523, 878, 1593
TaqI TCGA 3 cut(s) 837, 990, 1195
TasI AATT 8 cut(s) 412, 829, 1028, 1179, 1383, 1398, 1406, 1502
TatI WGTACW 1 cut(s) 220
TfiI GAWTC 1 cut(s) 374
Tru1I TTAA 6 cut(s) 125, 257, 381, 828, 1257, 1382
Tru9I TTAA 6 cut(s) 125, 257, 381, 828, 1257, 1382
TscAI CASTG 3 cut(s) 412, 559, 1499
TseFI GTSAC 1 cut(s) 339
TseI GCWGC 4 cut(s) 176, 302, 305, 731
Tsp45I GTSAC 1 cut(s) 339
TspDTI ATGAA 7 cut(s) 49, 50, 111, 480, 656, 1124, 1172
TspGWI ACGGA 2 cut(s) 366, 1276
TspMI CCCGGG 1 cut(s) 708
TspRI CASTG 3 cut(s) 412, 559, 1499
Tth111I GACNNNGTC 1 cut(s) 687
Vha464I CTTAAG 1 cut(s) 380
VpaK11BI GGWCC 1 cut(s) 281
XapI RAATTY 5 cut(s) 412, 1179, 1398, 1406, 1502
XbaI TCTAGA 1 cut(s) 1402
XceI RCATGY 1 cut(s) 176
XcmI CCANNNNNNNNNTGG 1 cut(s) 404
XhoI CTCGAG 1 cut(s) 1194
XmaI CCCGGG 1 cut(s) 708
XspI CTAG 4 cut(s) 309, 956, 1403, 1602
ZrmI AGTACT 1 cut(s) 222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.