Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0006582

Physical Location & Seq

Genomic Coordinates Forward (+)

3444155 .. 3446593

Gene Structure 2439 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G031800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 945 bp

ATGGCTCTCACTGATGAGTTTCAAGCTCTCAACAAGGCTTTCTCAGGAGTTGGAATTGATGAAAATTCATTAATATCAATACTGGGAAAATGGCATCCTGAGGAGAGGAAATCCTTCAGGAAAGGAACTCCCCATTTTTTCAAGCAAGATGAACGCAACTTTGAGCGCTGGGATGATCTCCATGTCAAACTTCTCAAGCATGAATTCATGCGTTTTAAGAATGCTGTGGTGCTATGGACTATGCATTCATGGGAAAGGGATGCTCGTTTGGTGAAGGAGGCCTTGAAGAAAGGCCCACAAACATACAGTGTGCTTGTGGAGATTGCATGTACTAGATCGGCCGAGGAGCTATTAGGAGCTAGGAAGGCCTACCATTCCCTCTTTGATCACTCCATTGAGGAAGACGTTGCCTACCACATTGATGGCCCTGAAGGCAAGCTCTTGGTTGCGCTTGTGAGTGCCTACAGGTACGAAGGACCAAAGGTTAAAGATGACACTGCAAAATCCGAGGCCAAAACACTTGCTCATGCCATTAAGAATGCAGATAAGAGGAACCCCATTGAAGATGATGAGGTCATTAGGATACTATCAACAAGGAGCAAGCCCCATCTCAAGGAAATATATAAACACTACCAGGAGATTTCTGGCCACAACATCGATGAGGATCTTGATGATGCTTTGAGGTTAAAAGAGACAGTGCAATGCCTATGTACTCCTCACACATACTTCGGCCAGGTCTTGGAAATTTCATTGAGAAATGGTGTGGATAAGAACATCAAAAAGGGATTGACTAGGGTAATCGTCACCCGAGCCGACGCAGACATGAAGGAGATCAAAGAGGAATACCAGAACCTATATGGAGTTTCTTTAACTGAGAAAATTGAAGCAACAGCTAATGGGAATTATAAGGATTTCTTACTCACTTTGGCTGCAAGAGGAGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005911 GO:0006950 GO:0006970 GO:0008150 GO:0009266 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009506 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0010035 GO:0030054 GO:0033993 GO:0042221 GO:0050896 GO:0055044 GO:0097159 GO:0097305 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Annexin

Protein Analysis

315

Amino Acids

35.97

Weight (kDa)

6.51

Isoelectric Point (pI)

38.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006582)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38750 AT2G38750
fragaria_vesca	FvH4_7g02660 FvH4_7g02660 FvH4_7g02660
malus_domestica	MD02G1291200.v1.1 MD07G1035400.v1.1
prunus_persica	Prupe.2G031800_v2.0.a1
pyrus_communis	pycom02g24610 pycom07g02480
rosa_chinensis	RchiOBHm_Chr1g0321341
rosa_laevigata	RLG00000030427
rosa_multiflora	Rmu_sc0000960.1_g000008 Rmu_sc0000960.1_g000009
rosa_roxburghii	Rroxscaffold_160G00433980 Rroxscaffold_4G00327600 Rroxscaffold_4G00327810
rosa_rugosa	Rorug01G0032300 Rorug01G0033000
rosa_samantha	Rh1AG044700 Rh1BG042100 Rh1BG042900 Rh1CG047100 Rh1CG047500 Rh1DG051600
rosa_wichuraiana	Rw1G003930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	906
AccB7I	CCANNNNNTGG	1 cut(s)	739
AclWI	GGATC	1 cut(s)	672
AcoI	YGGCCR	3 cut(s)	339, 646, 730
AcsI	RAATTY	3 cut(s)	64, 203, 744
AcuI	CTGAAG	2 cut(s)	100, 450
AfaI	GTAC	3 cut(s)	331, 470, 712
AfeI	AGCGCT	1 cut(s)	167
AfiI	CCNNNNNNNGG	2 cut(s)	613, 739
AgsI	TTSAA	5 cut(s)	23, 142, 286, 563, 884
AjnI	CCWGG	2 cut(s)	633, 732
AluBI	AGCT	5 cut(s)	26, 349, 359, 439, 893
AluI	AGCT	5 cut(s)	26, 349, 359, 439, 893
Alw26I	GTCTC	1 cut(s)	686
AlwI	GGATC	1 cut(s)	672
Ama87I	CYCGRG	1 cut(s)	807
Aor51HI	AGCGCT	1 cut(s)	167
AoxI	GGCC	8 cut(s)	279, 292, 339, 366, 424, 510, 646, 730
ApeKI	GCWGC	1 cut(s)	929
ApoI	RAATTY	3 cut(s)	64, 203, 744
AseI	ATTAAT	1 cut(s)	71
Asp700I	GAANNNNTTC	1 cut(s)	113
AspLEI	GCGC	2 cut(s)	168, 451
AspS9I	GGNCC	3 cut(s)	293, 425, 476
AsuHPI	GGTGA	2 cut(s)	283, 796
AvaI	CYCGRG	1 cut(s)	807
AvaII	GGWCC	1 cut(s)	476
AxyI	CCTNAGG	1 cut(s)	99
BalI	TGGCCA	1 cut(s)	648
BbsI	GAAGAC	1 cut(s)	408
BbvI	GCAGC	1 cut(s)	916
BccI	CCATC	2 cut(s)	416, 615
BciT130I	CCWGG	2 cut(s)	635, 734
BciVI	GTATCC	1 cut(s)	576
BclI	TGATCA	1 cut(s)	385
BcoDI	GTCTC	1 cut(s)	686
BfaI	CTAG	3 cut(s)	333, 360, 792
BfmI	CTRYAG	1 cut(s)	463
BfoI	RGCGCY	1 cut(s)	169
BfuI	GTATCC	1 cut(s)	576
BglI	GCCNNNNNGGC	1 cut(s)	432
BisI	GCNGC	1 cut(s)	930
BlsI	GCNGC	1 cut(s)	931
Bme1390I	CCNGG	2 cut(s)	635, 734
Bme18I	GGWCC	1 cut(s)	476
BmeT110I	CYCGRG	1 cut(s)	807
BmgT120I	GGNCC	3 cut(s)	293, 425, 476
BmiI	GGNNCC	1 cut(s)	554
BmrFI	CCNGG	2 cut(s)	635, 734
BmrI	ACTGGG	1 cut(s)	92
BmsI	GCATC	3 cut(s)	103, 250, 664
BmuI	ACTGGG	1 cut(s)	92
BpiI	GAAGAC	1 cut(s)	408
BpuEI	CTTGAG	2 cut(s)	179, 596
Bsa29I	ATCGAT	1 cut(s)	657
BsaBI	GATNNNNATC	1 cut(s)	663
BsaJI	CCNNGG	2 cut(s)	342, 507
Bsc4I	CCNNNNNNNGG	2 cut(s)	613, 739
Bse1I	ACTGG	1 cut(s)	87
Bse21I	CCTNAGG	1 cut(s)	99
Bse3DI	GCAATG	1 cut(s)	707
Bse8I	GATNNNNATC	1 cut(s)	663
BseBI	CCWGG	2 cut(s)	635, 734
BseCI	ATCGAT	1 cut(s)	657
BseDI	CCNNGG	2 cut(s)	342, 507
BseGI	GGATG	3 cut(s)	94, 178, 265
BseJI	GATNNNNATC	1 cut(s)	663
BseLI	CCNNNNNNNGG	2 cut(s)	613, 739
BseMI	GCAATG	1 cut(s)	707
BseMII	CTCAG	3 cut(s)	57, 90, 864
BseNI	ACTGG	1 cut(s)	87
BseRI	GAGGAG	3 cut(s)	116, 359, 705
BseX3I	CGGCCG	1 cut(s)	339
BseXI	GCAGC	1 cut(s)	916
BseYI	CCCAGC	1 cut(s)	168
Bsh1285I	CGRYCG	1 cut(s)	342
BshFI	GGCC	8 cut(s)	281, 294, 341, 368, 426, 512, 648, 732
BshVI	ATCGAT	1 cut(s)	657
BsiEI	CGRYCG	1 cut(s)	342
BsiHKCI	CYCGRG	1 cut(s)	807
BslI	CCNNNNNNNGG	2 cut(s)	613, 739
BsmAI	GTCTC	1 cut(s)	686
BsmI	GAATGC	3 cut(s)	226, 244, 544
BsnI	GGCC	8 cut(s)	281, 294, 341, 368, 426, 512, 648, 732
BsoBI	CYCGRG	1 cut(s)	807
Bsp143I	GATC	5 cut(s)	175, 335, 385, 664, 831
BspANI	GGCC	8 cut(s)	281, 294, 341, 368, 426, 512, 648, 732
BspCNI	CTCAG	3 cut(s)	56, 91, 865
BspDI	ATCGAT	1 cut(s)	657
BspLI	GGNNCC	1 cut(s)	554
BspPI	GGATC	1 cut(s)	672
BsrDI	GCAATG	1 cut(s)	707
BsrI	ACTGG	1 cut(s)	87
BssECI	CCNNGG	2 cut(s)	342, 507
BssMI	GATC	5 cut(s)	175, 335, 385, 664, 831
Bst2UI	CCWGG	2 cut(s)	635, 734
Bst4CI	ACNGT	2 cut(s)	308, 697
BstC8I	GCNNGC	2 cut(s)	437, 602
BstDEI	CTNAG	3 cut(s)	43, 99, 873
BstF5I	GGATG	3 cut(s)	94, 178, 265
BstH2I	RGCGCY	1 cut(s)	169
BstHHI	GCGC	2 cut(s)	168, 451
BstKTI	GATC	5 cut(s)	178, 338, 388, 667, 834
BstMAI	GTCTC	1 cut(s)	686
BstMBI	GATC	5 cut(s)	175, 335, 385, 664, 831
BstMCI	CGRYCG	1 cut(s)	342
BstMWI	GCNNNNNNNGC	2 cut(s)	365, 432
BstNI	CCWGG	2 cut(s)	635, 734
BstNSI	RCATGY	1 cut(s)	330
BstSCI	CCNGG	2 cut(s)	633, 732
BstSFI	CTRYAG	1 cut(s)	463
BstV1I	GCAGC	1 cut(s)	916
BstV2I	GAAGAC	1 cut(s)	408
BstX2I	RGATCY	1 cut(s)	664
BstXI	CCANNNNNNTGG	1 cut(s)	422
BstYI	RGATCY	1 cut(s)	664
BstZI	CGGCCG	1 cut(s)	339
Bsu15I	ATCGAT	1 cut(s)	657
Bsu36I	CCTNAGG	1 cut(s)	99
BsuI	GTATCC	1 cut(s)	576
BsuRI	GGCC	8 cut(s)	281, 294, 341, 368, 426, 512, 648, 732
BsuTUI	ATCGAT	1 cut(s)	657
BtsCI	GGATG	3 cut(s)	94, 178, 265
BtsI	GCAGTG	1 cut(s)	495
BtsIMutI	CAGTG	4 cut(s)	9, 313, 495, 702
Cac8I	GCNNGC	2 cut(s)	437, 602
CfoI	GCGC	2 cut(s)	168, 451
Cfr13I	GGNCC	3 cut(s)	293, 425, 476
ClaI	ATCGAT	1 cut(s)	657
CseI	GACGC	1 cut(s)	824
Csp6I	GTAC	3 cut(s)	330, 469, 711
CviAII	CATG	7 cut(s)	182, 200, 208, 249, 327, 527, 823
CviQI	GTAC	3 cut(s)	330, 469, 711
DdeI	CTNAG	3 cut(s)	43, 99, 873
DpnI	GATC	5 cut(s)	177, 337, 387, 666, 833
DpnII	GATC	5 cut(s)	175, 335, 385, 664, 831
EaeI	YGGCCR	3 cut(s)	339, 646, 730
EagI	CGGCCG	1 cut(s)	339
EclXI	CGGCCG	1 cut(s)	339
Eco147I	AGGCCT	2 cut(s)	281, 368
Eco47I	GGWCC	1 cut(s)	476
Eco47III	AGCGCT	1 cut(s)	167
Eco52I	CGGCCG	1 cut(s)	339
Eco57I	CTGAAG	2 cut(s)	100, 450
Eco81I	CCTNAGG	1 cut(s)	99
Eco88I	CYCGRG	1 cut(s)	807
EcoRI	GAATTC	1 cut(s)	203
EcoRII	CCWGG	2 cut(s)	633, 732
EcoT22I	ATGCAT	1 cut(s)	246
FaeI	CATG	7 cut(s)	185, 203, 211, 252, 330, 530, 826
FalI	AAGNNNNNCTT	4 cut(s)	266, 298, 899, 931
FatI	CATG	7 cut(s)	181, 199, 207, 248, 326, 526, 822
FbaI	TGATCA	1 cut(s)	385
Fnu4HI	GCNGC	1 cut(s)	930
FokI	GGATG	3 cut(s)	81, 185, 272
Fsp4HI	GCNGC	1 cut(s)	930
FspBI	CTAG	3 cut(s)	333, 360, 792
GlaI	GCGC	2 cut(s)	167, 450
GluI	GCNGC	1 cut(s)	930
GsaI	CCCAGC	1 cut(s)	172
HaeII	RGCGCY	1 cut(s)	169
HaeIII	GGCC	8 cut(s)	281, 294, 341, 368, 426, 512, 648, 732
HgaI	GACGC	1 cut(s)	824
HhaI	GCGC	2 cut(s)	168, 451
Hin1II	CATG	7 cut(s)	185, 203, 211, 252, 330, 530, 826
Hin6I	GCGC	2 cut(s)	166, 449
HinP1I	GCGC	2 cut(s)	166, 449
HphI	GGTGA	2 cut(s)	283, 796
Hpy188I	TCNGA	1 cut(s)	508
Hpy188III	TCNNGA	4 cut(s)	45, 98, 118, 668
Hpy99I	CGWCG	1 cut(s)	818
HpyAV	CCTTC	6 cut(s)	124, 268, 358, 425, 467, 820
HpyCH4III	ACNGT	2 cut(s)	308, 697
HpyCH4IV	ACGT	1 cut(s)	405
HpyCH4V	TGCA	6 cut(s)	244, 326, 500, 542, 700, 932
HpyF10VI	GCNNNNNNNGC	2 cut(s)	365, 432
HpyF3I	CTNAG	3 cut(s)	43, 99, 873
HpySE526I	ACGT	1 cut(s)	405
Hsp92II	CATG	7 cut(s)	185, 203, 211, 252, 330, 530, 826
HspAI	GCGC	2 cut(s)	166, 449
Ksp22I	TGATCA	1 cut(s)	385
Kzo9I	GATC	5 cut(s)	175, 335, 385, 664, 831
LmnI	GCTCC	3 cut(s)	346, 356, 597
Lsp1109I	GCAGC	1 cut(s)	916
LweI	GCATC	3 cut(s)	103, 250, 664
MaeI	CTAG	3 cut(s)	333, 360, 792
MaeII	ACGT	1 cut(s)	405
MaeIII	GTNAC	1 cut(s)	802
MalI	GATC	5 cut(s)	177, 337, 387, 666, 833
MboI	GATC	5 cut(s)	175, 335, 385, 664, 831
MboII	GAAGA	3 cut(s)	298, 413, 575
MflI	RGATCY	1 cut(s)	664
MlsI	TGGCCA	1 cut(s)	648
MluCI	AATT	6 cut(s)	54, 64, 203, 744, 879, 901
MluNI	TGGCCA	1 cut(s)	648
MmeI	TCCRAC	1 cut(s)	31
Mox20I	TGGCCA	1 cut(s)	648
Mph1103I	ATGCAT	1 cut(s)	246
MroXI	GAANNNNTTC	1 cut(s)	113
MscI	TGGCCA	1 cut(s)	648
MseI	TTAA	6 cut(s)	71, 216, 486, 534, 686, 869
MslI	CAYNNNNRTG	1 cut(s)	420
Msp20I	TGGCCA	1 cut(s)	648
MspR9I	CCNGG	2 cut(s)	635, 734
Mva1269I	GAATGC	3 cut(s)	226, 244, 544
MvaI	CCWGG	2 cut(s)	635, 734
MwoI	GCNNNNNNNGC	2 cut(s)	365, 432
NdeII	GATC	5 cut(s)	175, 335, 385, 664, 831
NlaIII	CATG	7 cut(s)	185, 203, 211, 252, 330, 530, 826
NlaIV	GGNNCC	1 cut(s)	554
NmeAIII	GCCGAG	1 cut(s)	367
NmuCI	GTSAC	1 cut(s)	802
NsiI	ATGCAT	1 cut(s)	246
NspI	RCATGY	1 cut(s)	330
PceI	AGGCCT	2 cut(s)	281, 368
PctI	GAATGC	3 cut(s)	226, 244, 544
PdmI	GAANNNNTTC	1 cut(s)	113
PflMI	CCANNNNNTGG	1 cut(s)	739
PkrI	GCNGC	1 cut(s)	931
PshBI	ATTAAT	1 cut(s)	71
PsiI	TTATAA	1 cut(s)	906
Psp6I	CCWGG	2 cut(s)	633, 732
PspFI	CCCAGC	1 cut(s)	168
PspGI	CCWGG	2 cut(s)	633, 732
PspN4I	GGNNCC	1 cut(s)	554
PspPI	GGNCC	3 cut(s)	293, 425, 476
PsuI	RGATCY	1 cut(s)	664
RsaI	GTAC	3 cut(s)	331, 470, 712
RsaNI	GTAC	3 cut(s)	330, 469, 711
RseI	CAYNNNNRTG	1 cut(s)	420
SaqAI	TTAA	6 cut(s)	71, 216, 486, 534, 686, 869
SatI	GCNGC	1 cut(s)	930
Sau3AI	GATC	5 cut(s)	175, 335, 385, 664, 831
Sau96I	GGNCC	3 cut(s)	293, 425, 476
ScrFI	CCNGG	2 cut(s)	635, 734
SfaNI	GCATC	3 cut(s)	103, 250, 664
SfcI	CTRYAG	1 cut(s)	463
SinI	GGWCC	1 cut(s)	476
SmiMI	CAYNNNNRTG	1 cut(s)	420
SmlI	CTYRAG	2 cut(s)	194, 611
SmoI	CTYRAG	2 cut(s)	194, 611
Sse9I	AATT	6 cut(s)	54, 64, 203, 744, 879, 901
SseBI	AGGCCT	2 cut(s)	281, 368
SspMI	CTAG	3 cut(s)	333, 360, 792
StuI	AGGCCT	2 cut(s)	281, 368
StyD4I	CCNGG	2 cut(s)	633, 732
TaaI	ACNGT	2 cut(s)	308, 697
TaiI	ACGT	1 cut(s)	408
TaqI	TCGA	1 cut(s)	657
TasI	AATT	6 cut(s)	54, 64, 203, 744, 879, 901
TatI	WGTACW	2 cut(s)	329, 710
Tru1I	TTAA	6 cut(s)	71, 216, 486, 534, 686, 869
Tru9I	TTAA	6 cut(s)	71, 216, 486, 534, 686, 869
TscAI	CASTG	4 cut(s)	16, 313, 502, 702
TseFI	GTSAC	1 cut(s)	802
TseI	GCWGC	1 cut(s)	929
Tsp45I	GTSAC	1 cut(s)	802
TspDTI	ATGAA	8 cut(s)	57, 75, 165, 196, 216, 237, 738, 839
TspRI	CASTG	4 cut(s)	16, 313, 502, 702
Van91I	CCANNNNNTGG	1 cut(s)	739
VpaK11BI	GGWCC	1 cut(s)	476
VspI	ATTAAT	1 cut(s)	71
XapI	RAATTY	3 cut(s)	64, 203, 744
XceI	RCATGY	1 cut(s)	330
XcmI	CCANNNNNNNNNTGG	2 cut(s)	641, 854
XmnI	GAANNNNTTC	1 cut(s)	113
XspI	CTAG	3 cut(s)	333, 360, 792
Zsp2I	ATGCAT	1 cut(s)	246

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.