MD07G1073100.v1.1

No apical meristem (NAM) protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0005817
Physical Location & Seq
Forward (+)
6943268 .. 6950293
7026 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1073100.v1.1.491

Sequence Viewer

Length: 1992 bp
ATGGGTCGAGAAGCGGACCTTCAGATAATAGCATCAGCCGCCGCCGAAGTCGCCGTAGCCGCCCCCTTAGTGCCGCCGACACTGCCACCGGCCCCGACTGCCCTCGCTCCCGGCTTCAGGTTCCACCCAACAGACGAGGAACTCGTCATTTACTACCTCAAGCGCAAGGTCTGTCGCAAACCCTTCAAATTTAACGCGATCTCTGAGGTCGACATCTACAAGAGCGAGCCCTGGGACCTCGCTGACAAGTCGAGCTTGAAGAGCAGGGACCAGGAGTACTACTTTTTCAGTGCATTGGACAGGAAGTATGGAAATGGGGCAAGGATGAACAGGGCTACCAACCAAGGGTACTGGAAGGCCACCGGAAATGACCGGCCCGTTAAGCACAACGATATCGTCGTGGGGATGAAGAAAACCTTGGTGTTCCATAGCGGCCGAGCTCCAGATGGGAAAAGGACCAATTGGGTTATGCATGAGTACAGACTTGTTGATGAAGTTTTTGAGAAGGCTGGGCTCGGTGCCATTCAGGATGCGTTTGTGCTATGTCGAGTATTTCACAAAAGCAATATAGGACCACCAAATGGGCATCGGTATGCGCCTTTTGTTGAGGAGGAGTGGGACGATGATGATAAGTTAACTTTGGTTCCTGGACAAGAGACCCGGACTGTAGCTGTAGTTAGTCGTGATGCATTTGTGGTAGGAAATGGTCATGCTGCATGTAGTGAACAAAATGATTATGCTGCTGGTAATGAACAAAAGGTACATGCTGCTGGTAGTGAACAAAAGGTACATGCTGCTCGTAGTGAACAAAATGGACTTTCTGCATACATTAGAGGAAATGGACATGCTGCATATACTGGAGGAAATGGACATGCTGCATATACTGGAGGAAATGGACATGCTGCTCATATTGGAGGAAATGGGCATGCTGTATATATTGGAGGAAATGGTCAAGCTGCATATAATGGAGAAAATGGTCATGGAACTTCCGTTGAAGGAAATGGTCATGGAACTTCCATGGAAGGAATTGCTCATGGAACTTCCGTTGAAGGAACTGGTCATGGAACTTCTGTCAAAGGGAGTGGTCACAGCACTTCTGTCGAAGGACGTGGTCGTGGCACTTCTGTTGAAAGAAATGGTCACGGCACTTCTGTCGAAGGAAGTGGTCATCGCACTTCTGTCGAAGAAAATGGTCATGGCATTTCTGTCGAAGGAAATGTTGTTGAAGGAATTGGTCATGGCGCTATAATTGTAGTAGATGACAATGGAACTACTAATGAAGGTGACTGTCATGAAACTTGTACTGCAGGAAATGGTCACAGTGTGCCCAGTGCAGAAAATAATATTGAGCAGAATACTCAGGCAATCAGCAAGGCTATTGTTGTTGTTCCTGAACTTCCAGCGGAGAATCAAACTGTTTTACCACCATGCAAGACAGAGAAAACTGACGATTATCCTATGACATGTGTGGTTAATAGAGAAGAGAGATTAGATGACTATCCGTCACCAGGTCCAGATGATGCGCAACCCCTGCTAACTTTGTTTAATCGACAACCTGGGCAACTACGCCAGTATAAAAGAAGGCGGCATAACGACTCAAATTCTAACCATTCAAACGCTTCTGAGATTTCAAGTGGGATGACACATGACCCTTGCTCATCTACAACAACAACAGCGTCAACTGAGGCATCGATGACGACTACCAGAAATTTTCTCTCTGCACTGGTGGAGTATCAGCTGTTAGAATCCCTTGAACCCAAAGACACTACCCCAGCACCTCCTCCTGAACTCAATGCTGCTTTGATGGAATCTTCTGTGCCTACCAGCTGCTTGAAATACATAGAGACTTTACAAACTGAGATCCACAAAATCTCAATTGAGAGGGAGACATTGAAGTTTGAAATGATGAGTGCCCAAGCCATGATCAACATTCTTCAAGCCCGAATTGATCTCCTAAACAAGGAGAACGAGGATTTGAAGAAGAAGGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0001067 GO:0002237 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006325 GO:0006351 GO:0006355 GO:0006396 GO:0006464 GO:0006482 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009642 GO:0009644 GO:0009648 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009962 GO:0009987 GO:0010033 GO:0010228 GO:0010267 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016569 GO:0016570 GO:0016577 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022414 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0034720 GO:0035194 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048229 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060966 GO:0060968 GO:0061458 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070918 GO:0070988 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1901698 GO:1901699 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1990837 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

664

Amino Acids

71.54

Weight (kDa)

5.76

Isoelectric Point (pI)

33.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 37 - 162 7.5e-47 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1524
AccB1I GGYRCC 1 cut(s) 518
AccB7I CCANNNNNTGG 1 cut(s) 581
AccI GTMKAC 1 cut(s) 210
AccII CGCG 1 cut(s) 197
AciI CCGC 8 cut(s) 14, 39, 42, 60, 74, 432, 1403, 1585
AclWI GGATC 1 cut(s) 1855
AcoI YGGCCR 1 cut(s) 433
AcsI RAATTY 3 cut(s) 188, 1600, 1708
AcuI CTGAAG 2 cut(s) 5, 100
AdeI CACNNNGTG 1 cut(s) 1324
AfaI GTAC 6 cut(s) 278, 350, 479, 762, 789, 1303
AfiI CCNNNNNNNGG 5 cut(s) 117, 345, 581, 1508, 1960
AflIII ACRYGT 1 cut(s) 1463
AhdI GACNNNNNGTC 1 cut(s) 1501
AjiI CACGTC 1 cut(s) 1109
AjnI CCWGG 5 cut(s) 230, 270, 646, 1507, 1555
AjuI GAANNNNNNNTTGG 2 cut(s) 401, 433
AluBI AGCT 6 cut(s) 255, 440, 671, 956, 1738, 1827
AluI AGCT 6 cut(s) 255, 440, 671, 956, 1738, 1827
Alw21I GWGCWC 1 cut(s) 442
Alw26I GTCTC 3 cut(s) 650, 1838, 1880
AlwI GGATC 1 cut(s) 1855
AoxI GGCC 4 cut(s) 90, 357, 374, 433
ApoI RAATTY 3 cut(s) 188, 1600, 1708
AspLEI GCGC 4 cut(s) 165, 598, 1244, 1525
AspS9I GGNCC 8 cut(s) 16, 91, 235, 268, 375, 456, 572, 1511
AsuC2I CCSGG 2 cut(s) 111, 661
AsuHPI GGTGA 2 cut(s) 1295, 1497
AvaII GGWCC 6 cut(s) 16, 235, 268, 456, 572, 1511
BaeGI GKGCMC 2 cut(s) 1329, 1915
BanI GGYRCC 1 cut(s) 518
BanII GRGCYC 3 cut(s) 231, 442, 516
Bbv12I GWGCWC 1 cut(s) 442
BccI CCATC 2 cut(s) 440, 1798
BceAI ACGGC 2 cut(s) 38, 1159
BcgI CGANNNNNNTGC 8 cut(s) 1081, 1115, 1135, 1162, 1169, 1189, 1196, 1223
BciT130I CCWGG 5 cut(s) 232, 272, 648, 1509, 1557
BclI TGATCA 1 cut(s) 1923
BcnI CCSGG 2 cut(s) 111, 661
BcoDI GTCTC 3 cut(s) 650, 1838, 1880
BfmI CTRYAG 3 cut(s) 666, 672, 1305
BfoI RGCGCY 1 cut(s) 1245
BmcAI AGTACT 1 cut(s) 278
Bme1390I CCNGG 7 cut(s) 111, 232, 272, 648, 661, 1509, 1557
Bme18I GGWCC 6 cut(s) 16, 235, 268, 456, 572, 1511
BmeRI GACNNNNNGTC 1 cut(s) 1501
BmgBI CACGTC 1 cut(s) 1109
BmgT120I GGNCC 8 cut(s) 16, 91, 235, 268, 375, 456, 572, 1511
BmiI GGNNCC 6 cut(s) 93, 122, 236, 269, 520, 645
BmrFI CCNGG 7 cut(s) 111, 232, 272, 648, 661, 1509, 1557
BmrI ACTGGG 1 cut(s) 1323
BmsI GCATC 6 cut(s) 41, 520, 595, 676, 1510, 1697
BmuI ACTGGG 1 cut(s) 1323
BpmI CTGGAG 3 cut(s) 426, 879, 906
BpuEI CTTGAG 1 cut(s) 143
BpuMI CCSGG 2 cut(s) 111, 661
Bsa29I ATCGAT 1 cut(s) 1691
BsaBI GATNNNNATC 1 cut(s) 1497
BsaI GGTCTC 1 cut(s) 650
BsaJI CCNNGG 6 cut(s) 230, 231, 343, 417, 1017, 1556
BsaWI WCCGGW 1 cut(s) 362
Bsc4I CCNNNNNNNGG 5 cut(s) 117, 345, 581, 1508, 1960
Bse118I RCCGGY 2 cut(s) 88, 372
Bse1I ACTGG 7 cut(s) 356, 862, 889, 1060, 1329, 1570, 1728
Bse8I GATNNNNATC 1 cut(s) 1497
BseBI CCWGG 5 cut(s) 232, 272, 648, 1509, 1557
BseCI ATCGAT 1 cut(s) 1691
BseDI CCNNGG 6 cut(s) 230, 231, 343, 417, 1017, 1556
BseGI GGATG 4 cut(s) 330, 411, 535, 1644
BseJI GATNNNNATC 1 cut(s) 1497
BseLI CCNNNNNNNGG 5 cut(s) 117, 345, 581, 1508, 1960
BseMII CTCAG 5 cut(s) 195, 1373, 1614, 1674, 1848
BseNI ACTGG 7 cut(s) 356, 862, 889, 1060, 1329, 1570, 1728
BseRI GAGGAG 3 cut(s) 623, 626, 1770
BseSI GKGCMC 2 cut(s) 1329, 1915
BseX3I CGGCCG 1 cut(s) 433
BseYI CCCAGC 2 cut(s) 509, 1771
BsgI GTGCAG 2 cut(s) 1353, 1704
Bsh1236I CGCG 1 cut(s) 197
Bsh1285I CGRYCG 1 cut(s) 436
BshFI GGCC 4 cut(s) 92, 359, 376, 435
BshNI GGYRCC 1 cut(s) 518
BshVI ATCGAT 1 cut(s) 1691
BsiEI CGRYCG 1 cut(s) 436
BsiHKAI GWGCWC 1 cut(s) 442
BsiSI CCGG 5 cut(s) 89, 111, 363, 373, 661
BslFI GGGAC 3 cut(s) 248, 281, 632
BslI CCNNNNNNNGG 5 cut(s) 117, 345, 581, 1508, 1960
BsmAI GTCTC 3 cut(s) 650, 1838, 1880
BsmFI GGGAC 3 cut(s) 248, 281, 632
BsnI GGCC 4 cut(s) 92, 359, 376, 435
Bso31I GGTCTC 1 cut(s) 650
Bsp1286I GDGCHC 5 cut(s) 231, 442, 516, 1329, 1915
Bsp143I GATC 4 cut(s) 198, 1860, 1923, 1948
Bsp19I CCATGG 1 cut(s) 1017
BspACI CCGC 8 cut(s) 14, 39, 42, 60, 74, 432, 1403, 1585
BspANI GGCC 4 cut(s) 92, 359, 376, 435
BspCNI CTCAG 5 cut(s) 196, 1372, 1615, 1675, 1849
BspDI ATCGAT 1 cut(s) 1691
BspFNI CGCG 1 cut(s) 197
BspHI TCATGA 1 cut(s) 1291
BspLI GGNNCC 6 cut(s) 93, 122, 236, 269, 520, 645
BspMAI CTGCAG 1 cut(s) 1309
BspPI GGATC 1 cut(s) 1855
BspQI GCTCTTC 1 cut(s) 254
BspT107I GGYRCC 1 cut(s) 518
BspTNI GGTCTC 1 cut(s) 650
BsrFI RCCGGY 2 cut(s) 88, 372
BsrI ACTGG 7 cut(s) 356, 862, 889, 1060, 1329, 1570, 1728
BssAI RCCGGY 2 cut(s) 88, 372
BssECI CCNNGG 6 cut(s) 230, 231, 343, 417, 1017, 1556
BssMI GATC 4 cut(s) 198, 1860, 1923, 1948
BssT1I CCWWGG 3 cut(s) 343, 417, 1017
Bst2UI CCWGG 5 cut(s) 232, 272, 648, 1509, 1557
Bst4CI ACNGT 4 cut(s) 667, 1289, 1322, 1417
Bst6I CTCTTC 2 cut(s) 254, 1476
BstAPI GCANNNNNTGC 1 cut(s) 1531
BstC8I GCNNGC 2 cut(s) 227, 927
BstDEI CTNAG 6 cut(s) 67, 204, 1359, 1623, 1683, 1857
BstDSI CCRYGG 1 cut(s) 1017
BstENI CCTNNNNNAGG 1 cut(s) 1958
BstF5I GGATG 4 cut(s) 330, 411, 535, 1644
BstFNI CGCG 1 cut(s) 197
BstH2I RGCGCY 1 cut(s) 1245
BstHHI GCGC 4 cut(s) 165, 598, 1244, 1525
BstKTI GATC 4 cut(s) 201, 1863, 1926, 1951
BstMAI GTCTC 3 cut(s) 650, 1838, 1880
BstMBI GATC 4 cut(s) 198, 1860, 1923, 1948
BstMCI CGRYCG 1 cut(s) 436
BstMWI GCNNNNNNNGC 8 cut(s) 38, 50, 59, 82, 98, 261, 382, 1531
BstNI CCWGG 5 cut(s) 232, 272, 648, 1509, 1557
BstNSI RCATGY 8 cut(s) 720, 767, 794, 848, 875, 902, 929, 1467
BstSCI CCNGG 7 cut(s) 109, 230, 270, 646, 659, 1507, 1555
BstSFI CTRYAG 3 cut(s) 666, 672, 1305
BstSLI GKGCMC 2 cut(s) 1329, 1915
BstUI CGCG 1 cut(s) 197
BstX2I RGATCY 1 cut(s) 1860
BstYI RGATCY 1 cut(s) 1860
BstZI CGGCCG 1 cut(s) 433
Bsu15I ATCGAT 1 cut(s) 1691
BsuRI GGCC 4 cut(s) 92, 359, 376, 435
BsuTUI ATCGAT 1 cut(s) 1691
BtgI CCRYGG 1 cut(s) 1017
BtgZI GCGATG 1 cut(s) 1154
BtrI CACGTC 1 cut(s) 1109
BtsCI GGATG 4 cut(s) 330, 411, 535, 1644
BtsI GCAGTG 1 cut(s) 80
BtsIMutI CAGTG 5 cut(s) 80, 295, 1327, 1336, 1721
Cac8I GCNNGC 2 cut(s) 227, 927
CciI TCATGA 1 cut(s) 1291
CfoI GCGC 4 cut(s) 165, 598, 1244, 1525
Cfr10I RCCGGY 2 cut(s) 88, 372
Cfr13I GGNCC 8 cut(s) 16, 91, 235, 268, 375, 456, 572, 1511
ClaI ATCGAT 1 cut(s) 1691
CseI GACGC 1 cut(s) 1665
CsiI ACCWGGT 1 cut(s) 1507
Csp6I GTAC 6 cut(s) 277, 349, 478, 761, 788, 1302
CspCI CAANNNNNGTGG 2 cut(s) 1063, 1098
CviQI GTAC 6 cut(s) 277, 349, 478, 761, 788, 1302
DdeI CTNAG 6 cut(s) 67, 204, 1359, 1623, 1683, 1857
DpnI GATC 4 cut(s) 200, 1862, 1925, 1950
DpnII GATC 4 cut(s) 198, 1860, 1923, 1948
DraIII CACNNNGTG 1 cut(s) 1324
DriI GACNNNNNGTC 1 cut(s) 1501
EaeI YGGCCR 1 cut(s) 433
EagI CGGCCG 1 cut(s) 433
Eam1104I CTCTTC 2 cut(s) 254, 1476
Eam1105I GACNNNNNGTC 1 cut(s) 1501
EarI CTCTTC 2 cut(s) 254, 1476
Ecl136II GAGCTC 1 cut(s) 440
EclXI CGGCCG 1 cut(s) 433
Eco130I CCWWGG 3 cut(s) 343, 417, 1017
Eco24I GRGCYC 3 cut(s) 231, 442, 516
Eco31I GGTCTC 1 cut(s) 650
Eco32I GATATC 1 cut(s) 394
Eco47I GGWCC 6 cut(s) 16, 235, 268, 456, 572, 1511
Eco52I CGGCCG 1 cut(s) 433
Eco53kI GAGCTC 1 cut(s) 440
Eco57I CTGAAG 2 cut(s) 5, 100
EcoICRI GAGCTC 1 cut(s) 440
EcoNI CCTNNNNNAGG 1 cut(s) 1958
EcoO109I RGGNCCY 1 cut(s) 235
EcoRII CCWGG 5 cut(s) 230, 270, 646, 1507, 1555
EcoRV GATATC 1 cut(s) 394
EcoT14I CCWWGG 3 cut(s) 343, 417, 1017
EcoT22I ATGCAT 2 cut(s) 474, 691
EcoT38I GRGCYC 3 cut(s) 231, 442, 516
ErhI CCWWGG 3 cut(s) 343, 417, 1017
FalI AAGNNNNNCTT 5 cut(s) 35, 239, 271, 401, 433
FaqI GGGAC 3 cut(s) 248, 281, 632
FbaI TGATCA 1 cut(s) 1923
FblI GTMKAC 1 cut(s) 210
FokI GGATG 4 cut(s) 337, 418, 542, 1651
FriOI GRGCYC 3 cut(s) 231, 442, 516
FspI TGCGCA 1 cut(s) 1524
GlaI GCGC 4 cut(s) 164, 597, 1243, 1524
GsaI CCCAGC 2 cut(s) 513, 1775
GsuI CTGGAG 3 cut(s) 426, 879, 906
HaeII RGCGCY 1 cut(s) 1245
HaeIII GGCC 4 cut(s) 92, 359, 376, 435
HapII CCGG 5 cut(s) 89, 111, 363, 373, 661
HgaI GACGC 1 cut(s) 1665
HhaI GCGC 4 cut(s) 165, 598, 1244, 1525
Hin6I GCGC 4 cut(s) 163, 596, 1242, 1523
HinP1I GCGC 4 cut(s) 163, 596, 1242, 1523
HincII GTYRAC 3 cut(s) 211, 636, 1680
HindII GTYRAC 3 cut(s) 211, 636, 1680
HinfI GANTC 4 cut(s) 1408, 1595, 1745, 1808
HpaI GTTAAC 1 cut(s) 636
HpaII CCGG 5 cut(s) 89, 111, 363, 373, 661
HphI GGTGA 2 cut(s) 1295, 1497
Hpy166II GTNNAC 6 cut(s) 211, 636, 725, 779, 806, 1680
Hpy188I TCNGA 4 cut(s) 24, 205, 1624, 1991
Hpy188III TCNNGA 8 cut(s) 8, 443, 527, 683, 1292, 1391, 1514, 1784
Hpy8I GTNNAC 6 cut(s) 211, 636, 725, 779, 806, 1680
Hpy99I CGWCG 1 cut(s) 401
HpyCH4III ACNGT 4 cut(s) 667, 1289, 1322, 1417
HpyCH4IV ACGT 1 cut(s) 1108
HpyF10VI GCNNNNNNNGC 8 cut(s) 38, 50, 59, 82, 98, 261, 382, 1531
HpyF3I CTNAG 6 cut(s) 67, 204, 1359, 1623, 1683, 1857
HpySE526I ACGT 1 cut(s) 1108
HspAI GCGC 4 cut(s) 163, 596, 1242, 1523
Ksp22I TGATCA 1 cut(s) 1923
KspAI GTTAAC 1 cut(s) 636
Kzo9I GATC 4 cut(s) 198, 1860, 1923, 1948
LguI GCTCTTC 1 cut(s) 254
LmnI GCTCC 2 cut(s) 112, 445
LweI GCATC 6 cut(s) 41, 520, 595, 676, 1510, 1697
MabI ACCWGGT 1 cut(s) 1507
MaeII ACGT 1 cut(s) 1108
MaeIII GTNAC 5 cut(s) 1085, 1139, 1283, 1316, 1503
MalI GATC 4 cut(s) 200, 1862, 1925, 1950
MboI GATC 4 cut(s) 198, 1860, 1923, 1948
MboII GAAGA 7 cut(s) 271, 421, 1196, 1493, 1803, 1925, 1990
MfeI CAATTG 2 cut(s) 460, 1875
MflI RGATCY 1 cut(s) 1860
MhlI GDGCHC 5 cut(s) 231, 442, 516, 1329, 1915
MluCI AATT 9 cut(s) 188, 460, 1026, 1230, 1248, 1600, 1708, 1875, 1944
MlyI GAGTC 1 cut(s) 1589
Mph1103I ATGCAT 2 cut(s) 474, 691
MseI TTAA 5 cut(s) 192, 381, 635, 1473, 1545
MslI CAYNNNNRTG 1 cut(s) 591
MspA1I CMGCKG 3 cut(s) 1403, 1738, 1827
MspI CCGG 5 cut(s) 89, 111, 363, 373, 661
MspR9I CCNGG 7 cut(s) 111, 232, 272, 648, 661, 1509, 1557
MunI CAATTG 2 cut(s) 460, 1875
MvaI CCWGG 5 cut(s) 232, 272, 648, 1509, 1557
MvnI CGCG 1 cut(s) 197
MwoI GCNNNNNNNGC 8 cut(s) 38, 50, 59, 82, 98, 261, 382, 1531
NciI CCSGG 2 cut(s) 111, 661
NcoI CCATGG 1 cut(s) 1017
NdeII GATC 4 cut(s) 198, 1860, 1923, 1948
NlaIV GGNNCC 6 cut(s) 93, 122, 236, 269, 520, 645
NmeAIII GCCGAG 1 cut(s) 461
NmuCI GTSAC 5 cut(s) 1085, 1139, 1283, 1316, 1503
NsbI TGCGCA 1 cut(s) 1524
NsiI ATGCAT 2 cut(s) 474, 691
NspI RCATGY 8 cut(s) 720, 767, 794, 848, 875, 902, 929, 1467
PaeI GCATGC 1 cut(s) 929
PagI TCATGA 1 cut(s) 1291
PasI CCCWGGG 1 cut(s) 231
PciI ACATGT 1 cut(s) 1463
PciSI GCTCTTC 1 cut(s) 254
PcsI WCGNNNNNNNCGW 2 cut(s) 141, 396
PfeI GAWTC 3 cut(s) 1408, 1745, 1808
PflFI GACNNNGTC 1 cut(s) 1110
PflMI CCANNNNNTGG 1 cut(s) 581
PfoI TCCNGGA 1 cut(s) 646
PleI GAGTC 1 cut(s) 1589
PpsI GAGTC 1 cut(s) 1589
PpuMI RGGWCCY 1 cut(s) 235
PscI ACATGT 1 cut(s) 1463
Psp124BI GAGCTC 1 cut(s) 442
Psp5II RGGWCCY 1 cut(s) 235
Psp6I CCWGG 5 cut(s) 230, 270, 646, 1507, 1555
PspFI CCCAGC 2 cut(s) 509, 1771
PspGI CCWGG 5 cut(s) 230, 270, 646, 1507, 1555
PspN4I GGNNCC 6 cut(s) 93, 122, 236, 269, 520, 645
PspPI GGNCC 8 cut(s) 16, 91, 235, 268, 375, 456, 572, 1511
PspPPI RGGWCCY 1 cut(s) 235
PsrI GAACNNNNNNTAC 4 cut(s) 744, 771, 776, 803
PstI CTGCAG 1 cut(s) 1309
PsuI RGATCY 1 cut(s) 1860
PsyI GACNNNGTC 1 cut(s) 1110
PvuII CAGCTG 2 cut(s) 1738, 1827
RsaI GTAC 6 cut(s) 278, 350, 479, 762, 789, 1303
RsaNI GTAC 6 cut(s) 277, 349, 478, 761, 788, 1302
RseI CAYNNNNRTG 1 cut(s) 591
SacI GAGCTC 1 cut(s) 442
SalI GTCGAC 1 cut(s) 209
SapI GCTCTTC 1 cut(s) 254
SaqAI TTAA 5 cut(s) 192, 381, 635, 1473, 1545
Sau3AI GATC 4 cut(s) 198, 1860, 1923, 1948
Sau96I GGNCC 8 cut(s) 16, 91, 235, 268, 375, 456, 572, 1511
ScaI AGTACT 1 cut(s) 278
SchI GAGTC 1 cut(s) 1589
ScrFI CCNGG 7 cut(s) 111, 232, 272, 648, 661, 1509, 1557
SduI GDGCHC 5 cut(s) 231, 442, 516, 1329, 1915
SexAI ACCWGGT 1 cut(s) 1507
SfaNI GCATC 6 cut(s) 41, 520, 595, 676, 1510, 1697
SfcI CTRYAG 3 cut(s) 666, 672, 1305
SinI GGWCC 6 cut(s) 16, 235, 268, 456, 572, 1511
SmiMI CAYNNNNRTG 1 cut(s) 591
SmlI CTYRAG 1 cut(s) 158
SmoI CTYRAG 1 cut(s) 158
SphI GCATGC 1 cut(s) 929
Sse9I AATT 9 cut(s) 188, 460, 1026, 1230, 1248, 1600, 1708, 1875, 1944
SsiI CCGC 8 cut(s) 14, 39, 42, 60, 74, 432, 1403, 1585
SspI AATATT 1 cut(s) 1345
SstI GAGCTC 1 cut(s) 442
StyD4I CCNGG 7 cut(s) 109, 230, 270, 646, 659, 1507, 1555
StyI CCWWGG 3 cut(s) 343, 417, 1017
TaaI ACNGT 4 cut(s) 667, 1289, 1322, 1417
TaiI ACGT 1 cut(s) 1111
TasI AATT 9 cut(s) 188, 460, 1026, 1230, 1248, 1600, 1708, 1875, 1944
TatI WGTACW 3 cut(s) 276, 477, 1301
TauI GCSGC 6 cut(s) 41, 44, 62, 76, 435, 1588
TfiI GAWTC 3 cut(s) 1408, 1745, 1808
Tru1I TTAA 5 cut(s) 192, 381, 635, 1473, 1545
Tru9I TTAA 5 cut(s) 192, 381, 635, 1473, 1545
TscAI CASTG 5 cut(s) 87, 295, 1327, 1336, 1728
TseFI GTSAC 5 cut(s) 1085, 1139, 1283, 1316, 1503
Tsp45I GTSAC 5 cut(s) 1085, 1139, 1283, 1316, 1503
TspDTI ATGAA 6 cut(s) 341, 422, 507, 765, 1293, 1308
TspGWI ACGGA 3 cut(s) 979, 1033, 1491
TspRI CASTG 5 cut(s) 87, 295, 1327, 1336, 1728
Tth111I GACNNNGTC 1 cut(s) 1110
Van91I CCANNNNNTGG 1 cut(s) 581
VpaK11BI GGWCC 6 cut(s) 16, 235, 268, 456, 572, 1511
XagI CCTNNNNNAGG 1 cut(s) 1958
XapI RAATTY 3 cut(s) 188, 1600, 1708
XceI RCATGY 8 cut(s) 720, 767, 794, 848, 875, 902, 929, 1467
XmiI GTMKAC 1 cut(s) 210
ZrmI AGTACT 1 cut(s) 278
Zsp2I ATGCAT 2 cut(s) 474, 691
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.