RLG00000029412

No apical meristem (NAM) protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0005817
Physical Location & Seq
Reverse (-)
38412028 .. 38418032
6005 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029412

Sequence Viewer

Length: 1920 bp
ATGGGTCACGAGCTAGCGCCGTCGACCACCACTCCCCCACTCTCAAAACCTCCGGTCGCCCCCACTGCCTTGGCTCCGGGCTTCCGATTTCACCCAACCGACGAAGAACTCGTCATTTACTACCTCAAACGCAAAGTCTGCCGCAAACCCTTCAAATTCAACGCGATCTCCGATGTCGATATCTACAAGAGCGAACCTTGGGACCTCGCATGTAAGTCGAGCTTGAAGAGCAGGGACCAGGAGTACTATTTCTTCAGTGCATTGGACAAGAAGTATGGAAATGGGGCAAGGATGAATAGGGCTACACATCTAGGGTACTGGAAGGCCACTGGAAATGACAGGCCTGTCAAGCACAACAATAAGACTGTTGGGATGAAGAAAACTTTGGTTTTTCATAGTGGCAGAGCTCCAGATGGCAAGAGGACTAATTGGGTCATGCATGAGTATAGGCTTGTTGATACGGAAATGGAAAAACCTGGAAATGGTGTTCCTCAAGATGCGTATGTGTTGTGTAGGGTATTTCATAAAAGTAATATAGGACCACCAAATGGGCATCGATATGCGCCTTTTGTTGAGGAGGAATGGGATGATGAAAAGTTAACTTTCGTTCCTGGAGAAGTGGCTAGGGATGACACAGTAGTTAGTCGTGATTCCGTTGGAAATCGTTGCGATGCAGTTAAGGTAGGAAATTATCATGATTCCGTTGTTGGAGGAAATCATCGGGATGTACCTATGGTAGGAAATGGTCATGATTCAGTTGTTGGAGGAAATCATTGCGATATAGCTATGGCAGGAAATGGTCATGATTCAGTTGTTGGAGGAAATCGTCGCGATGTAGTTGTGATAGGAAATGGTCATGATTCAGTTGTCGGAGGTGCTACTCGTGATGCAGTTGTAGCAAATGGTTGTCATGCAGTTGTTGTAGCAAATGGTCGTGGTACAGTTGTTGGAAATGGTCATCATGCAGCTGTTGGAGGAAATGGTCATGCTGCTGCCTGTATTGAAGAAAAAGTTCGTGCTGCTGTGGATATTGATCAAAAAGATCATGTTGCGGCAGTTGTTGAACAAAAAGATAATGCTTCTGCAAGTATTGAACAAAAAGATCACGATGTCTGTCTTGGAGGCCGCCCTTCTGTTGATGGACATGTTCAGGACACTATGATGGAAGTAGATGGTCATGGAACTACCGAGGAAGGAAATGTTCATGGAAGCATTAGAGGAAATGGTCATGATGGGCGCAGCGCAGGGAACTATTTTGTGCAGGATACTCAGAAAATCAGCAATGCTCTTCTTAGTGCTACTGAACTTCCAAAAGACAGTCAAACTGTTTTAGTGCCATGCAAGAGAGAGAAATTGGATGATGATCCAATGACATGTGTAGTTAATCGAGAAGAGAGATTGGATGATTACCCATCACCGCTTGGAGATGATCCACAACCCCTGCTATCACTGTTTAATCAGCAGCCTGGTATACTACGCCAATATAAAAGGAGGAGGCATAATGAATCAAATTCAAACCGTTCAAATGCCTCAGAGATTTCAAGTGGGTTGACTCATGATCCTTGCTCATCTACAACAACGACAGCGTCAACAGAGACTTCGGTGACGGCAACAACAAAAAGAAATTTTCTGTCTGCATTGGTGGAATTTCAACTGTTAGAATCCCTTGAACCCAAAGATAAGACTCCGGTAGCTCCACCTGAATTTAATGCTGCTCTGCATAATTCATCTGTGCCTTCTAGCTGCTTGAAATTCATAGAGAGTTTGCAAAATGAGATTCACAAGATTTCGATTGAGAAGGAGACATTGAAATTTGAAATGCTGAGTGCCCAAGCTGTGATTAACATTCTTCAATCTAGAATTGATCTTCTGAACAAGGAGAATGAGGATCTGAAGAGGAATGCCCGAGAGGCTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0001067 GO:0002237 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006325 GO:0006351 GO:0006355 GO:0006396 GO:0006464 GO:0006482 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009642 GO:0009644 GO:0009648 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009962 GO:0009987 GO:0010033 GO:0010228 GO:0010267 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016569 GO:0016570 GO:0016577 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022414 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0034720 GO:0035194 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048229 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060966 GO:0060968 GO:0061458 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070918 GO:0070988 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1901698 GO:1901699 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1990837 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

640

Amino Acids

69.88

Weight (kDa)

6.11

Isoelectric Point (pI)

43.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 26 - 151 5e-46 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 344
AccB7I CCANNNNNTGG 1 cut(s) 548
AccI GTMKAC 2 cut(s) 23, 1471
AccII CGCG 2 cut(s) 164, 831
AciI CCGC 4 cut(s) 142, 1052, 1126, 1418
AclWI GGATC 4 cut(s) 1358, 1424, 1553, 1896
AcsI RAATTY 7 cut(s) 155, 1510, 1624, 1646, 1703, 1751, 1811
AcuI CTGAAG 2 cut(s) 238, 1913
AfaI GTAC 4 cut(s) 245, 317, 729, 940
AfiI CCNNNNNNNGG 3 cut(s) 482, 548, 737
AflIII ACRYGT 2 cut(s) 1144, 1373
AjnI CCWGG 4 cut(s) 237, 475, 610, 1465
AjuI GAANNNNNNNTTGG 2 cut(s) 368, 400
AloI GAACNNNNNNTCC 2 cut(s) 471, 503
AluBI AGCT 8 cut(s) 13, 222, 407, 785, 968, 1694, 1743, 1835
AluI AGCT 8 cut(s) 13, 222, 407, 785, 968, 1694, 1743, 1835
Alw21I GWGCWC 1 cut(s) 409
Alw26I GTCTC 2 cut(s) 1589, 1796
AlwI GGATC 4 cut(s) 1358, 1424, 1553, 1896
Ama87I CYCGRG 1 cut(s) 1905
AoxI GGCC 3 cut(s) 324, 341, 1123
ApeKI GCWGC 8 cut(s) 965, 989, 992, 1019, 1239, 1462, 1712, 1743
ApoI RAATTY 7 cut(s) 155, 1510, 1624, 1646, 1703, 1751, 1811
ArsI GACNNNNNNTTYG 4 cut(s) 96, 120, 128, 152
Asp700I GAANNNNTTC 1 cut(s) 1011
AspLEI GCGC 4 cut(s) 19, 565, 1239, 1244
AspS9I GGNCC 3 cut(s) 202, 235, 539
AsuC2I CCSGG 1 cut(s) 78
AsuHPI GGTGA 3 cut(s) 83, 1407, 1615
AsuNHI GCTAGC 1 cut(s) 13
AvaI CYCGRG 1 cut(s) 1905
AvaII GGWCC 3 cut(s) 202, 235, 539
BaeGI GKGCMC 1 cut(s) 1831
BaeI ACNNNNGTAYC 2 cut(s) 930, 963
BanII GRGCYC 1 cut(s) 409
BarI GAAGNNNNNNTAC 2 cut(s) 236, 268
BauI CACGAG 2 cut(s) 8, 882
Bbv12I GWGCWC 1 cut(s) 409
BbvI GCAGC 8 cut(s) 976, 977, 979, 1006, 1251, 1474, 1699, 1730
BccI CCATC 6 cut(s) 407, 1133, 1156, 1166, 1226, 1420
BceAI ACGGC 2 cut(s) 4, 1623
BcgI CGANNNNNNTGC 2 cut(s) 198, 232
BciT130I CCWGG 4 cut(s) 239, 477, 612, 1467
BciVI GTATCC 1 cut(s) 1258
BclI TGATCA 1 cut(s) 1033
BcnI CCSGG 1 cut(s) 78
BcoDI GTCTC 2 cut(s) 1589, 1796
BfaI CTAG 5 cut(s) 14, 311, 624, 1740, 1857
BfoI RGCGCY 1 cut(s) 20
BfuI GTATCC 1 cut(s) 1258
BglI GCCNNNNNGGC 1 cut(s) 1910
BmcAI AGTACT 1 cut(s) 245
Bme1390I CCNGG 5 cut(s) 78, 239, 477, 612, 1467
Bme18I GGWCC 3 cut(s) 202, 235, 539
BmeT110I CYCGRG 1 cut(s) 1905
BmgT120I GGNCC 3 cut(s) 202, 235, 539
BmiI GGNNCC 3 cut(s) 75, 203, 236
BmrFI CCNGG 5 cut(s) 78, 239, 477, 612, 1467
BmsI GCATC 4 cut(s) 487, 562, 661, 877
BmtI GCTAGC 1 cut(s) 17
BpmI CTGGAG 2 cut(s) 393, 633
BpuEI CTTGAG 1 cut(s) 477
BpuMI CCSGG 1 cut(s) 78
Bsa29I ATCGAT 1 cut(s) 556
BsaBI GATNNNNATC 2 cut(s) 1032, 1362
BsaJI CCNNGG 3 cut(s) 69, 197, 1188
BsaWI WCCGGW 2 cut(s) 52, 1687
BsaXI ACNNNNNCTCC 4 cut(s) 16, 46, 152, 182
Bsc4I CCNNNNNNNGG 3 cut(s) 482, 548, 737
Bse1I ACTGG 2 cut(s) 323, 334
Bse3DI GCAATG 2 cut(s) 772, 1288
Bse8I GATNNNNATC 2 cut(s) 1032, 1362
BseBI CCWGG 4 cut(s) 239, 477, 612, 1467
BseCI ATCGAT 1 cut(s) 556
BseDI CCNNGG 3 cut(s) 69, 197, 1188
BseGI GGATG 7 cut(s) 297, 378, 592, 634, 730, 1363, 1408
BseJI GATNNNNATC 2 cut(s) 1032, 1362
BseLI CCNNNNNNNGG 3 cut(s) 482, 548, 737
BseMI GCAATG 2 cut(s) 772, 1288
BseMII CTCAG 4 cut(s) 1283, 1545, 1814, 1905
BseNI ACTGG 2 cut(s) 323, 334
BseRI GAGGAG 2 cut(s) 590, 1507
BseSI GKGCMC 1 cut(s) 1831
BseXI GCAGC 8 cut(s) 976, 977, 979, 1006, 1251, 1474, 1699, 1730
BsgI GTGCAG 1 cut(s) 1280
Bsh1236I CGCG 2 cut(s) 164, 831
Bsh1285I CGRYCG 1 cut(s) 57
BshFI GGCC 3 cut(s) 326, 343, 1125
BshVI ATCGAT 1 cut(s) 556
BsiEI CGRYCG 1 cut(s) 57
BsiHKAI GWGCWC 1 cut(s) 409
BsiHKCI CYCGRG 1 cut(s) 1905
BsiSI CCGG 3 cut(s) 53, 77, 1688
BslFI GGGAC 2 cut(s) 215, 248
BslI CCNNNNNNNGG 3 cut(s) 482, 548, 737
BsmAI GTCTC 2 cut(s) 1589, 1796
BsmFI GGGAC 2 cut(s) 215, 248
BsmI GAATGC 1 cut(s) 1906
BsnI GGCC 3 cut(s) 326, 343, 1125
BsoBI CYCGRG 1 cut(s) 1905
Bsp1286I GDGCHC 2 cut(s) 409, 1831
Bsp143I GATC 9 cut(s) 165, 1033, 1042, 1102, 1363, 1429, 1558, 1864, 1888
Bsp68I TCGCGA 1 cut(s) 831
BspACI CCGC 4 cut(s) 142, 1052, 1126, 1418
BspANI GGCC 3 cut(s) 326, 343, 1125
BspCNI CTCAG 4 cut(s) 1282, 1544, 1815, 1906
BspDI ATCGAT 1 cut(s) 556
BspFNI CGCG 2 cut(s) 164, 831
BspHI TCATGA 6 cut(s) 694, 748, 802, 856, 1228, 1555
BspLI GGNNCC 3 cut(s) 75, 203, 236
BspOI GCTAGC 1 cut(s) 17
BspPI GGATC 4 cut(s) 1358, 1424, 1553, 1896
BspQI GCTCTTC 2 cut(s) 221, 1293
BsrDI GCAATG 2 cut(s) 772, 1288
BsrI ACTGG 2 cut(s) 323, 334
BssECI CCNNGG 3 cut(s) 69, 197, 1188
BssMI GATC 9 cut(s) 165, 1033, 1042, 1102, 1363, 1429, 1558, 1864, 1888
BssNAI GTATAC 1 cut(s) 1472
BssSI CACGAG 2 cut(s) 8, 882
BssT1I CCWWGG 2 cut(s) 69, 197
Bst1107I GTATAC 1 cut(s) 1472
Bst2BI CACGAG 2 cut(s) 8, 882
Bst2UI CCWGG 4 cut(s) 239, 477, 612, 1467
Bst4CI ACNGT 8 cut(s) 367, 637, 943, 1319, 1327, 1452, 1520, 1656
Bst6I CTCTTC 4 cut(s) 221, 1293, 1386, 1889
BstAPI GCANNNNNTGC 1 cut(s) 138
BstC8I GCNNGC 1 cut(s) 15
BstDEI CTNAG 5 cut(s) 1269, 1292, 1531, 1823, 1914
BstENI CCTNNNNNAGG 1 cut(s) 735
BstF5I GGATG 7 cut(s) 297, 378, 592, 634, 730, 1363, 1408
BstFNI CGCG 2 cut(s) 164, 831
BstH2I RGCGCY 1 cut(s) 20
BstHHI GCGC 4 cut(s) 19, 565, 1239, 1244
BstKTI GATC 9 cut(s) 168, 1036, 1045, 1105, 1366, 1432, 1561, 1867, 1891
BstMAI GTCTC 2 cut(s) 1589, 1796
BstMBI GATC 9 cut(s) 165, 1033, 1042, 1102, 1363, 1429, 1558, 1864, 1888
BstMCI CGRYCG 1 cut(s) 57
BstMWI GCNNNNNNNGC 6 cut(s) 65, 138, 228, 349, 896, 1910
BstNI CCWGG 4 cut(s) 239, 477, 612, 1467
BstNSI RCATGY 3 cut(s) 213, 1148, 1377
BstSCI CCNGG 5 cut(s) 76, 237, 475, 610, 1465
BstSLI GKGCMC 1 cut(s) 1831
BstUI CGCG 2 cut(s) 164, 831
BstV1I GCAGC 8 cut(s) 976, 977, 979, 1006, 1251, 1474, 1699, 1730
BstX2I RGATCY 1 cut(s) 1888
BstXI CCANNNNNNTGG 1 cut(s) 70
BstYI RGATCY 1 cut(s) 1888
BstZ17I GTATAC 1 cut(s) 1472
Bsu15I ATCGAT 1 cut(s) 556
BsuI GTATCC 1 cut(s) 1258
BsuRI GGCC 3 cut(s) 326, 343, 1125
BsuTUI ATCGAT 1 cut(s) 556
BtgZI GCGATG 2 cut(s) 684, 846
BtsCI GGATG 7 cut(s) 297, 378, 592, 634, 730, 1363, 1408
BtsI GCAGTG 1 cut(s) 63
BtsIMutI CAGTG 4 cut(s) 63, 262, 327, 1448
BtuMI TCGCGA 1 cut(s) 831
Cac8I GCNNGC 1 cut(s) 15
CciI TCATGA 6 cut(s) 694, 748, 802, 856, 1228, 1555
CfoI GCGC 4 cut(s) 19, 565, 1239, 1244
Cfr13I GGNCC 3 cut(s) 202, 235, 539
ClaI ATCGAT 1 cut(s) 556
CseI GACGC 1 cut(s) 1575
Csp6I GTAC 4 cut(s) 244, 316, 728, 939
CviQI GTAC 4 cut(s) 244, 316, 728, 939
DdeI CTNAG 5 cut(s) 1269, 1292, 1531, 1823, 1914
DpnI GATC 9 cut(s) 167, 1035, 1044, 1104, 1365, 1431, 1560, 1866, 1890
DpnII GATC 9 cut(s) 165, 1033, 1042, 1102, 1363, 1429, 1558, 1864, 1888
DrdI GACNNNNNNGTC 1 cut(s) 344
DseDI GACNNNNNNGTC 1 cut(s) 344
Eam1104I CTCTTC 4 cut(s) 221, 1293, 1386, 1889
EarI CTCTTC 4 cut(s) 221, 1293, 1386, 1889
Ecl136II GAGCTC 1 cut(s) 407
Eco130I CCWWGG 2 cut(s) 69, 197
Eco147I AGGCCT 1 cut(s) 343
Eco24I GRGCYC 1 cut(s) 409
Eco32I GATATC 1 cut(s) 181
Eco47I GGWCC 3 cut(s) 202, 235, 539
Eco53kI GAGCTC 1 cut(s) 407
Eco57I CTGAAG 2 cut(s) 238, 1913
Eco88I CYCGRG 1 cut(s) 1905
EcoICRI GAGCTC 1 cut(s) 407
EcoNI CCTNNNNNAGG 1 cut(s) 735
EcoO109I RGGNCCY 1 cut(s) 202
EcoRII CCWGG 4 cut(s) 237, 475, 610, 1465
EcoRV GATATC 1 cut(s) 181
EcoT14I CCWWGG 2 cut(s) 69, 197
EcoT22I ATGCAT 1 cut(s) 441
EcoT38I GRGCYC 1 cut(s) 409
ErhI CCWWGG 2 cut(s) 69, 197
FalI AAGNNNNNCTT 2 cut(s) 206, 238
FaqI GGGAC 2 cut(s) 215, 248
FbaI TGATCA 1 cut(s) 1033
FblI GTMKAC 2 cut(s) 23, 1471
FokI GGATG 7 cut(s) 304, 385, 599, 641, 737, 1370, 1415
FriOI GRGCYC 1 cut(s) 409
FspBI CTAG 5 cut(s) 14, 311, 624, 1740, 1857
GlaI GCGC 4 cut(s) 18, 564, 1238, 1243
GsuI CTGGAG 2 cut(s) 393, 633
HaeII RGCGCY 1 cut(s) 20
HaeIII GGCC 3 cut(s) 326, 343, 1125
HapII CCGG 3 cut(s) 53, 77, 1688
HgaI GACGC 1 cut(s) 1575
HhaI GCGC 4 cut(s) 19, 565, 1239, 1244
Hin6I GCGC 4 cut(s) 17, 563, 1237, 1242
HinP1I GCGC 4 cut(s) 17, 563, 1237, 1242
HincII GTYRAC 4 cut(s) 24, 600, 1551, 1590
HindII GTYRAC 4 cut(s) 24, 600, 1551, 1590
HpaI GTTAAC 1 cut(s) 600
HpaII CCGG 3 cut(s) 53, 77, 1688
HphI GGTGA 3 cut(s) 83, 1407, 1615
Hpy166II GTNNAC 5 cut(s) 24, 600, 1472, 1551, 1590
Hpy188I TCNGA 7 cut(s) 86, 172, 872, 1272, 1534, 1872, 1893
Hpy8I GTNNAC 5 cut(s) 24, 600, 1472, 1551, 1590
Hpy99I CGWCG 3 cut(s) 25, 104, 831
HpyAV CCTTC 6 cut(s) 160, 316, 1140, 1187, 1746, 1792
HpyCH4III ACNGT 8 cut(s) 367, 637, 943, 1319, 1327, 1452, 1520, 1656
HpyF10VI GCNNNNNNNGC 6 cut(s) 65, 138, 228, 349, 896, 1910
HpyF3I CTNAG 5 cut(s) 1269, 1292, 1531, 1823, 1914
HspAI GCGC 4 cut(s) 17, 563, 1237, 1242
Ksp22I TGATCA 1 cut(s) 1033
KspAI GTTAAC 1 cut(s) 600
Kzo9I GATC 9 cut(s) 165, 1033, 1042, 1102, 1363, 1429, 1558, 1864, 1888
LguI GCTCTTC 2 cut(s) 221, 1293
LmnI GCTCC 3 cut(s) 79, 412, 1699
Lsp1109I GCAGC 8 cut(s) 976, 977, 979, 1006, 1251, 1474, 1699, 1730
LweI GCATC 4 cut(s) 487, 562, 661, 877
MaeI CTAG 5 cut(s) 14, 311, 624, 1740, 1857
MaeIII GTNAC 2 cut(s) 5, 1603
MalI GATC 9 cut(s) 167, 1035, 1044, 1104, 1365, 1431, 1560, 1866, 1890
MboI GATC 9 cut(s) 165, 1033, 1042, 1102, 1363, 1429, 1558, 1864, 1888
MflI RGATCY 1 cut(s) 1888
MhlI GDGCHC 2 cut(s) 409, 1831
MlyI GAGTC 2 cut(s) 1546, 1678
MmeI TCCRAC 7 cut(s) 637, 688, 742, 796, 850, 928, 952
Mph1103I ATGCAT 1 cut(s) 441
MroXI GAANNNNTTC 1 cut(s) 1011
MseI TTAA 6 cut(s) 599, 678, 1383, 1455, 1707, 1842
MslI CAYNNNNRTG 3 cut(s) 558, 723, 1160
MspA1I CMGCKG 1 cut(s) 968
MspI CCGG 3 cut(s) 53, 77, 1688
MspR9I CCNGG 5 cut(s) 78, 239, 477, 612, 1467
MteI GCGCNGCGC 1 cut(s) 1240
Mva1269I GAATGC 1 cut(s) 1906
MvaI CCWGG 4 cut(s) 239, 477, 612, 1467
MvnI CGCG 2 cut(s) 164, 831
MwoI GCNNNNNNNGC 6 cut(s) 65, 138, 228, 349, 896, 1910
NciI CCSGG 1 cut(s) 78
NdeII GATC 9 cut(s) 165, 1033, 1042, 1102, 1363, 1429, 1558, 1864, 1888
NheI GCTAGC 1 cut(s) 13
NlaIV GGNNCC 3 cut(s) 75, 203, 236
NmuCI GTSAC 2 cut(s) 5, 1603
NruI TCGCGA 1 cut(s) 831
NsiI ATGCAT 1 cut(s) 441
NspI RCATGY 3 cut(s) 213, 1148, 1377
PagI TCATGA 6 cut(s) 694, 748, 802, 856, 1228, 1555
PceI AGGCCT 1 cut(s) 343
PciI ACATGT 2 cut(s) 1144, 1373
PciSI GCTCTTC 2 cut(s) 221, 1293
PcsI WCGNNNNNNNCGW 2 cut(s) 108, 168
PctI GAATGC 1 cut(s) 1906
PdmI GAANNNNTTC 1 cut(s) 1011
PfeI GAWTC 8 cut(s) 650, 698, 752, 806, 860, 1505, 1661, 1777
PflFI GACNNNGTC 1 cut(s) 1585
PflMI CCANNNNNTGG 1 cut(s) 548
PfoI TCCNGGA 1 cut(s) 610
PleI GAGTC 2 cut(s) 1546, 1678
PpsI GAGTC 2 cut(s) 1546, 1678
PpuMI RGGWCCY 1 cut(s) 202
PscI ACATGT 2 cut(s) 1144, 1373
Psp124BI GAGCTC 1 cut(s) 409
Psp5II RGGWCCY 1 cut(s) 202
Psp6I CCWGG 4 cut(s) 237, 475, 610, 1465
PspGI CCWGG 4 cut(s) 237, 475, 610, 1465
PspN4I GGNNCC 3 cut(s) 75, 203, 236
PspPI GGNCC 3 cut(s) 202, 235, 539
PspPPI RGGWCCY 1 cut(s) 202
PsuI RGATCY 1 cut(s) 1888
PsyI GACNNNGTC 1 cut(s) 1585
PvuII CAGCTG 1 cut(s) 968
RruI TCGCGA 1 cut(s) 831
RsaI GTAC 4 cut(s) 245, 317, 729, 940
RsaNI GTAC 4 cut(s) 244, 316, 728, 939
RseI CAYNNNNRTG 3 cut(s) 558, 723, 1160
SacI GAGCTC 1 cut(s) 409
SalI GTCGAC 1 cut(s) 22
SapI GCTCTTC 2 cut(s) 221, 1293
SaqAI TTAA 6 cut(s) 599, 678, 1383, 1455, 1707, 1842
Sau3AI GATC 9 cut(s) 165, 1033, 1042, 1102, 1363, 1429, 1558, 1864, 1888
Sau96I GGNCC 3 cut(s) 202, 235, 539
ScaI AGTACT 1 cut(s) 245
SchI GAGTC 2 cut(s) 1546, 1678
ScrFI CCNGG 5 cut(s) 78, 239, 477, 612, 1467
SduI GDGCHC 2 cut(s) 409, 1831
SfaNI GCATC 4 cut(s) 487, 562, 661, 877
SinI GGWCC 3 cut(s) 202, 235, 539
SmiMI CAYNNNNRTG 3 cut(s) 558, 723, 1160
SmlI CTYRAG 1 cut(s) 492
SmoI CTYRAG 1 cut(s) 492
SseBI AGGCCT 1 cut(s) 343
SsiI CCGC 4 cut(s) 142, 1052, 1126, 1418
SspMI CTAG 5 cut(s) 14, 311, 624, 1740, 1857
SstI GAGCTC 1 cut(s) 409
StuI AGGCCT 1 cut(s) 343
StyD4I CCNGG 5 cut(s) 76, 237, 475, 610, 1465
StyI CCWWGG 2 cut(s) 69, 197
TaaI ACNGT 8 cut(s) 367, 637, 943, 1319, 1327, 1452, 1520, 1656
TaqI TCGA 6 cut(s) 23, 177, 218, 556, 1387, 1790
TatI WGTACW 1 cut(s) 243
TauI GCSGC 3 cut(s) 144, 1055, 1128
TfiI GAWTC 8 cut(s) 650, 698, 752, 806, 860, 1505, 1661, 1777
Tru1I TTAA 6 cut(s) 599, 678, 1383, 1455, 1707, 1842
Tru9I TTAA 6 cut(s) 599, 678, 1383, 1455, 1707, 1842
TscAI CASTG 4 cut(s) 70, 262, 334, 1455
TseFI GTSAC 2 cut(s) 5, 1603
TseI GCWGC 8 cut(s) 965, 989, 992, 1019, 1239, 1462, 1712, 1743
Tsp45I GTSAC 2 cut(s) 5, 1603
TspDTI ATGAA 9 cut(s) 308, 383, 389, 512, 606, 1193, 1518, 1716, 1744
TspGWI ACGGA 3 cut(s) 476, 643, 691
TspRI CASTG 4 cut(s) 70, 262, 334, 1455
Tth111I GACNNNGTC 1 cut(s) 1585
Van91I CCANNNNNTGG 1 cut(s) 548
VpaK11BI GGWCC 3 cut(s) 202, 235, 539
XagI CCTNNNNNAGG 1 cut(s) 735
XapI RAATTY 7 cut(s) 155, 1510, 1624, 1646, 1703, 1751, 1811
XbaI TCTAGA 1 cut(s) 1856
XceI RCATGY 3 cut(s) 213, 1148, 1377
XmiI GTMKAC 2 cut(s) 23, 1471
XmnI GAANNNNTTC 1 cut(s) 1011
XspI CTAG 5 cut(s) 14, 311, 624, 1740, 1857
ZrmI AGTACT 1 cut(s) 245
Zsp2I ATGCAT 1 cut(s) 441
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.