Rroxscaffold_4G00316380

No apical meristem (NAM) protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0005817
Physical Location & Seq
Reverse (-)
41204000 .. 41210457
6458 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00316380.1

Sequence Viewer

Length: 1869 bp
ATGTCGATATCTACAAGAGCGAACCTTGGGACCTCGCATGTCAGTGACACTTGCCCCATTTTCCCGAAAAATCTCTGCTTTTTTCTCAATTGGGGGTTTTTGATTGTTGCGGGTTCTGTGATTTTTGTGGGCTTTGTTGGGTTCTTGATGGGTTGTAAAGGTAAGTCGAGCTTGAAGAGCAGGGACCAGGAGTACTATTTCTTCAGTGCATTGGACAAGAAGTATGGAAATGGGGCAAGGATGAATAGGGCTACACATCTAGGGTACTGGAAGGCCACTGGAAATGACAGGCCTGTCAAGCACAACAATAAGACTGTTGGGATGAAGAAAACTTTGGTTTTTCATAGTGGCAGAGCTCCAGATGGCAAGAGGACTAATTGGGTCATGCATGAGTATAGGCTTGTTGATACGGAAATGGAAAAACCTGGAAATGGTGTTCCTCAGGATGCGTATGTGTTGTGTAGGGTATTTCATAAAAGTAATATAGGACCACCAAATGGGCATCGATATGCGCCTTTTGTTGAGGAGGAATGGGATGATGAAAAGTTAACTTTCGTTCCTGGAGAAGTGGCTAGGGATGACACAGTAGTTGGTCGTGATTCTGTTGGAAATCGTTGCGATGCAGTTATGGTAGGAAATGATCGTGATTCTGTTGTTGGAGGGAATCATCGGGATGTACCTATGGTAGGAAATGGTCATGATTCAGTTGTTGGAGGAAATCATTGCGATACAGCTATGGCAGGAAATGGTCATGATTCAGTTGTTGGAGGAAATCGTCGCGATGTAGTTGTGATAGGAAATGGTCATGATTCAGTTGTCGGAGGTGCTACTCGTGATGCAGTTGTAGCAAATGGTTGTCATGCAGTTGTTGTAGCAAATGGTTGTGATACAGTTGTTGGAAATGGTCGTCATGCAGCTGTTGGAGGAAACGGTCATGCTGCTGCCTGTATTGAAGAAAAAGTTCAGGCTGCTGTGGATATTGATCAAAAAGATCATGTTGCTCCAGTTGTTGAACAAAAAGATAATGCTTCTGCAAGTATTGAACAAAAAGATTATGATGTCTGTCTTGGAGGCGGTCCTTCTGTTGATGGACATGTTCAGGACACTACGATGGAAGTAGATGGTCATGGTACTACCAAGGAAGGAAATGTTCATGGAAGCATTAGAGGAAATGGTCATGACGGGCGCCGCGCAGGGAACTATTTTGTGCAGGATACTCAGACAATCAGCAACGCTCTTCTTAGTGCTACTGAACTTCCAAAAGACAATCACACTGTTTTAGTTCCATGCAAGAGAGAGAAATTGGATGATGATCCAATGACATGTGTAGTTAATCGAGAAGAGAGATTGGATGATTACCCATCACCTCTTGGAGATGATCCACAACCCCTGCTATCACTGTTTAATCAGCAGCCTGGTATACTACGCCAATATAAAAGGAGGAGGCATACTGAATCAAATTCAAACCGTTCAAATGCCTCAGAGATTTCAAGTGGGTTGACTCATGATCCTTGCTCATCTACAACAACGACAGCGTCAACAGAGACTTCAGTGACGGCAACGACAAAAAGAAATTTTCTGTCTGCATTGGTGGAATTTCAACTGTTAGAATCCCTTGAACCCAAAGATAAGACTCCGGTAGCTCCACCTGAATTTAATGCTGCTCTGCATAATTCATCTGTGCCTTCTAGCTGCTTGAAATTCATAGAGAGTTTGCAAAATGAGATCCACAAGATTTCGATTGAGAAGGAGACATTGAAATTTGAAATGCTGAGTGCCCAAGCTGTGATTAACATTCTTCAATCTAGAATTGATCTTCTGAACAAGGAGAATGAGGATCTGAAGAGGAATGCCCGAGAGGCTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0001067 GO:0002237 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006325 GO:0006351 GO:0006355 GO:0006396 GO:0006464 GO:0006482 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009642 GO:0009644 GO:0009648 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009962 GO:0009987 GO:0010033 GO:0010228 GO:0010267 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016569 GO:0016570 GO:0016577 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022414 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0034720 GO:0035194 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048229 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060966 GO:0060968 GO:0061458 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070918 GO:0070988 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1901698 GO:1901699 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1990837 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

622

Amino Acids

67.6

Weight (kDa)

5.98

Isoelectric Point (pI)

39.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 59 - 134 5.8e-24 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 293
AccB1I GGYRCC 1 cut(s) 1185
AccB7I CCANNNNNTGG 1 cut(s) 497
AccI GTMKAC 1 cut(s) 1420
AccII CGCG 2 cut(s) 780, 1191
AciI CCGC 3 cut(s) 110, 1074, 1189
AclWI GGATC 5 cut(s) 1307, 1373, 1502, 1720, 1845
AcsI RAATTY 6 cut(s) 1459, 1573, 1595, 1652, 1700, 1760
AcuI CTGAAG 3 cut(s) 187, 1533, 1862
AcyI GRCGYC 1 cut(s) 1186
AfaI GTAC 4 cut(s) 194, 266, 678, 1132
AfiI CCNNNNNNNGG 3 cut(s) 431, 497, 686
AflIII ACRYGT 2 cut(s) 1093, 1322
AjnI CCWGG 4 cut(s) 186, 424, 559, 1414
AjuI GAANNNNNNNTTGG 2 cut(s) 317, 349
AloI GAACNNNNNNTCC 2 cut(s) 420, 452
AluBI AGCT 7 cut(s) 171, 356, 734, 917, 1643, 1692, 1784
AluI AGCT 7 cut(s) 171, 356, 734, 917, 1643, 1692, 1784
Alw21I GWGCWC 1 cut(s) 358
Alw26I GTCTC 2 cut(s) 1538, 1745
AlwI GGATC 5 cut(s) 1307, 1373, 1502, 1720, 1845
Ama87I CYCGRG 1 cut(s) 1854
AoxI GGCC 2 cut(s) 273, 290
ApeKI GCWGC 7 cut(s) 914, 938, 941, 968, 1411, 1661, 1692
ApoI RAATTY 6 cut(s) 1459, 1573, 1595, 1652, 1700, 1760
Asp700I GAANNNNTTC 1 cut(s) 960
AspLEI GCGC 3 cut(s) 514, 1188, 1193
AspS9I GGNCC 4 cut(s) 30, 184, 488, 1076
AsuHPI GGTGA 1 cut(s) 1356
AvaI CYCGRG 1 cut(s) 1854
AvaII GGWCC 4 cut(s) 30, 184, 488, 1076
AxyI CCTNAGG 1 cut(s) 441
BaeGI GKGCMC 1 cut(s) 1780
BaeI ACNNNNGTAYC 2 cut(s) 879, 912
BanI GGYRCC 1 cut(s) 1185
BanII GRGCYC 1 cut(s) 358
BarI GAAGNNNNNNTAC 2 cut(s) 185, 217
BauI CACGAG 1 cut(s) 831
Bbv12I GWGCWC 1 cut(s) 358
BbvI GCAGC 7 cut(s) 925, 926, 928, 955, 1423, 1648, 1679
BccI CCATC 6 cut(s) 142, 356, 1082, 1105, 1115, 1369
BceAI ACGGC 1 cut(s) 1572
BciT130I CCWGG 4 cut(s) 188, 426, 561, 1416
BciVI GTATCC 1 cut(s) 1207
BclI TGATCA 1 cut(s) 982
BcoDI GTCTC 2 cut(s) 1538, 1745
BfaI CTAG 4 cut(s) 260, 573, 1689, 1806
BfoI RGCGCY 1 cut(s) 1189
BfuI GTATCC 1 cut(s) 1207
BglI GCCNNNNNGGC 1 cut(s) 1859
BisI GCNGC 8 cut(s) 915, 939, 942, 969, 1189, 1412, 1662, 1693
BlsI GCNGC 8 cut(s) 916, 940, 943, 970, 1190, 1413, 1663, 1694
BmcAI AGTACT 1 cut(s) 194
Bme1390I CCNGG 4 cut(s) 188, 426, 561, 1416
Bme18I GGWCC 4 cut(s) 30, 184, 488, 1076
BmeT110I CYCGRG 1 cut(s) 1854
BmgT120I GGNCC 4 cut(s) 30, 184, 488, 1076
BmiI GGNNCC 3 cut(s) 31, 185, 1187
BmrFI CCNGG 4 cut(s) 188, 426, 561, 1416
BmsI GCATC 4 cut(s) 436, 511, 610, 826
BpmI CTGGAG 3 cut(s) 342, 582, 987
Bsa29I ATCGAT 1 cut(s) 505
BsaBI GATNNNNATC 2 cut(s) 981, 1311
BsaHI GRCGYC 1 cut(s) 1186
BsaJI CCNNGG 2 cut(s) 25, 1137
BsaWI WCCGGW 1 cut(s) 1636
Bsc4I CCNNNNNNNGG 3 cut(s) 431, 497, 686
Bse1I ACTGG 3 cut(s) 272, 283, 1004
Bse21I CCTNAGG 1 cut(s) 441
Bse3DI GCAATG 1 cut(s) 721
Bse8I GATNNNNATC 2 cut(s) 981, 1311
BseBI CCWGG 4 cut(s) 188, 426, 561, 1416
BseCI ATCGAT 1 cut(s) 505
BseDI CCNNGG 2 cut(s) 25, 1137
BseGI GGATG 8 cut(s) 246, 327, 451, 541, 583, 679, 1312, 1357
BseJI GATNNNNATC 2 cut(s) 981, 1311
BseLI CCNNNNNNNGG 3 cut(s) 431, 497, 686
BseMI GCAATG 1 cut(s) 721
BseMII CTCAG 5 cut(s) 455, 1232, 1494, 1763, 1854
BseNI ACTGG 3 cut(s) 272, 283, 1004
BseRI GAGGAG 2 cut(s) 539, 1456
BseSI GKGCMC 1 cut(s) 1780
BseXI GCAGC 7 cut(s) 925, 926, 928, 955, 1423, 1648, 1679
BsgI GTGCAG 1 cut(s) 1229
Bsh1236I CGCG 2 cut(s) 780, 1191
BshFI GGCC 2 cut(s) 275, 292
BshNI GGYRCC 1 cut(s) 1185
BshVI ATCGAT 1 cut(s) 505
BsiHKAI GWGCWC 1 cut(s) 358
BsiHKCI CYCGRG 1 cut(s) 1854
BsiSI CCGG 1 cut(s) 1637
BslFI GGGAC 2 cut(s) 43, 197
BslI CCNNNNNNNGG 3 cut(s) 431, 497, 686
BsmAI GTCTC 2 cut(s) 1538, 1745
BsmFI GGGAC 2 cut(s) 43, 197
BsmI GAATGC 1 cut(s) 1855
BsnI GGCC 2 cut(s) 275, 292
BsoBI CYCGRG 1 cut(s) 1854
Bsp1286I GDGCHC 2 cut(s) 358, 1780
Bsp143I GATC 9 cut(s) 640, 982, 991, 1312, 1378, 1507, 1725, 1813, 1837
Bsp68I TCGCGA 1 cut(s) 780
BspACI CCGC 3 cut(s) 110, 1074, 1189
BspANI GGCC 2 cut(s) 275, 292
BspCNI CTCAG 5 cut(s) 454, 1231, 1493, 1764, 1855
BspDI ATCGAT 1 cut(s) 505
BspFNI CGCG 2 cut(s) 780, 1191
BspHI TCATGA 5 cut(s) 697, 751, 805, 1177, 1504
BspLI GGNNCC 3 cut(s) 31, 185, 1187
BspPI GGATC 5 cut(s) 1307, 1373, 1502, 1720, 1845
BspQI GCTCTTC 2 cut(s) 170, 1242
BspT107I GGYRCC 1 cut(s) 1185
BsrDI GCAATG 1 cut(s) 721
BsrI ACTGG 3 cut(s) 272, 283, 1004
BssECI CCNNGG 2 cut(s) 25, 1137
BssMI GATC 9 cut(s) 640, 982, 991, 1312, 1378, 1507, 1725, 1813, 1837
BssNAI GTATAC 1 cut(s) 1421
BssNI GRCGYC 1 cut(s) 1186
BssSI CACGAG 1 cut(s) 831
BssT1I CCWWGG 2 cut(s) 25, 1137
Bst1107I GTATAC 1 cut(s) 1421
Bst2BI CACGAG 1 cut(s) 831
Bst2UI CCWGG 4 cut(s) 188, 426, 561, 1416
Bst4CI ACNGT 8 cut(s) 316, 586, 892, 932, 1276, 1401, 1469, 1605
Bst6I CTCTTC 4 cut(s) 170, 1242, 1335, 1838
BstACI GRCGYC 1 cut(s) 1186
BstDEI CTNAG 6 cut(s) 441, 1218, 1241, 1480, 1772, 1863
BstENI CCTNNNNNAGG 1 cut(s) 684
BstF5I GGATG 8 cut(s) 246, 327, 451, 541, 583, 679, 1312, 1357
BstFNI CGCG 2 cut(s) 780, 1191
BstH2I RGCGCY 1 cut(s) 1189
BstHHI GCGC 3 cut(s) 514, 1188, 1193
BstKTI GATC 9 cut(s) 643, 985, 994, 1315, 1381, 1510, 1728, 1816, 1840
BstMAI GTCTC 2 cut(s) 1538, 1745
BstMBI GATC 9 cut(s) 640, 982, 991, 1312, 1378, 1507, 1725, 1813, 1837
BstMWI GCNNNNNNNGC 4 cut(s) 177, 298, 845, 1859
BstNI CCWGG 4 cut(s) 188, 426, 561, 1416
BstNSI RCATGY 3 cut(s) 41, 1097, 1326
BstSCI CCNGG 4 cut(s) 186, 424, 559, 1414
BstSLI GKGCMC 1 cut(s) 1780
BstUI CGCG 2 cut(s) 780, 1191
BstV1I GCAGC 7 cut(s) 925, 926, 928, 955, 1423, 1648, 1679
BstX2I RGATCY 2 cut(s) 1725, 1837
BstYI RGATCY 2 cut(s) 1725, 1837
BstZ17I GTATAC 1 cut(s) 1421
Bsu15I ATCGAT 1 cut(s) 505
Bsu36I CCTNAGG 1 cut(s) 441
BsuI GTATCC 1 cut(s) 1207
BsuRI GGCC 2 cut(s) 275, 292
BsuTUI ATCGAT 1 cut(s) 505
BtgZI GCGATG 2 cut(s) 633, 795
BtsCI GGATG 8 cut(s) 246, 327, 451, 541, 583, 679, 1312, 1357
BtsIMutI CAGTG 6 cut(s) 49, 211, 276, 1272, 1397, 1557
BtuMI TCGCGA 1 cut(s) 780
CciI TCATGA 5 cut(s) 697, 751, 805, 1177, 1504
CfoI GCGC 3 cut(s) 514, 1188, 1193
Cfr13I GGNCC 4 cut(s) 30, 184, 488, 1076
ClaI ATCGAT 1 cut(s) 505
CseI GACGC 1 cut(s) 1524
Csp6I GTAC 4 cut(s) 193, 265, 677, 1131
CviQI GTAC 4 cut(s) 193, 265, 677, 1131
DdeI CTNAG 6 cut(s) 441, 1218, 1241, 1480, 1772, 1863
DinI GGCGCC 1 cut(s) 1187
DpnI GATC 9 cut(s) 642, 984, 993, 1314, 1380, 1509, 1727, 1815, 1839
DpnII GATC 9 cut(s) 640, 982, 991, 1312, 1378, 1507, 1725, 1813, 1837
DrdI GACNNNNNNGTC 1 cut(s) 293
DseDI GACNNNNNNGTC 1 cut(s) 293
Eam1104I CTCTTC 4 cut(s) 170, 1242, 1335, 1838
EarI CTCTTC 4 cut(s) 170, 1242, 1335, 1838
Ecl136II GAGCTC 1 cut(s) 356
Eco130I CCWWGG 2 cut(s) 25, 1137
Eco147I AGGCCT 1 cut(s) 292
Eco24I GRGCYC 1 cut(s) 358
Eco32I GATATC 1 cut(s) 9
Eco47I GGWCC 4 cut(s) 30, 184, 488, 1076
Eco53kI GAGCTC 1 cut(s) 356
Eco57I CTGAAG 3 cut(s) 187, 1533, 1862
Eco81I CCTNAGG 1 cut(s) 441
Eco88I CYCGRG 1 cut(s) 1854
EcoICRI GAGCTC 1 cut(s) 356
EcoNI CCTNNNNNAGG 1 cut(s) 684
EcoO109I RGGNCCY 1 cut(s) 30
EcoRII CCWGG 4 cut(s) 186, 424, 559, 1414
EcoRV GATATC 1 cut(s) 9
EcoT14I CCWWGG 2 cut(s) 25, 1137
EcoT22I ATGCAT 1 cut(s) 390
EcoT38I GRGCYC 1 cut(s) 358
EgeI GGCGCC 1 cut(s) 1187
EheI GGCGCC 1 cut(s) 1187
ErhI CCWWGG 2 cut(s) 25, 1137
FalI AAGNNNNNCTT 2 cut(s) 155, 187
FaqI GGGAC 2 cut(s) 43, 197
FauI CCCGC 1 cut(s) 103
FbaI TGATCA 1 cut(s) 982
FblI GTMKAC 1 cut(s) 1420
Fnu4HI GCNGC 8 cut(s) 915, 939, 942, 969, 1189, 1412, 1662, 1693
FokI GGATG 8 cut(s) 253, 334, 458, 548, 590, 686, 1319, 1364
FriOI GRGCYC 1 cut(s) 358
Fsp4HI GCNGC 8 cut(s) 915, 939, 942, 969, 1189, 1412, 1662, 1693
FspBI CTAG 4 cut(s) 260, 573, 1689, 1806
GlaI GCGC 3 cut(s) 513, 1187, 1192
GluI GCNGC 8 cut(s) 915, 939, 942, 969, 1189, 1412, 1662, 1693
GsuI CTGGAG 3 cut(s) 342, 582, 987
HaeII RGCGCY 1 cut(s) 1189
HaeIII GGCC 2 cut(s) 275, 292
HapII CCGG 1 cut(s) 1637
HgaI GACGC 1 cut(s) 1524
HhaI GCGC 3 cut(s) 514, 1188, 1193
Hin1I GRCGYC 1 cut(s) 1186
Hin6I GCGC 3 cut(s) 512, 1186, 1191
HinP1I GCGC 3 cut(s) 512, 1186, 1191
HincII GTYRAC 3 cut(s) 549, 1500, 1539
HindII GTYRAC 3 cut(s) 549, 1500, 1539
HpaI GTTAAC 1 cut(s) 549
HpaII CCGG 1 cut(s) 1637
HphI GGTGA 1 cut(s) 1356
Hpy166II GTNNAC 4 cut(s) 549, 1421, 1500, 1539
Hpy188I TCNGA 5 cut(s) 821, 1221, 1483, 1821, 1842
Hpy8I GTNNAC 4 cut(s) 549, 1421, 1500, 1539
Hpy99I CGWCG 1 cut(s) 780
HpyAV CCTTC 5 cut(s) 265, 1089, 1136, 1695, 1741
HpyCH4III ACNGT 8 cut(s) 316, 586, 892, 932, 1276, 1401, 1469, 1605
HpyF10VI GCNNNNNNNGC 4 cut(s) 177, 298, 845, 1859
HpyF3I CTNAG 6 cut(s) 441, 1218, 1241, 1480, 1772, 1863
Hsp92I GRCGYC 1 cut(s) 1186
HspAI GCGC 3 cut(s) 512, 1186, 1191
KasI GGCGCC 1 cut(s) 1185
Ksp22I TGATCA 1 cut(s) 982
KspAI GTTAAC 1 cut(s) 549
Kzo9I GATC 9 cut(s) 640, 982, 991, 1312, 1378, 1507, 1725, 1813, 1837
LguI GCTCTTC 2 cut(s) 170, 1242
LmnI GCTCC 3 cut(s) 361, 1006, 1648
Lsp1109I GCAGC 7 cut(s) 925, 926, 928, 955, 1423, 1648, 1679
LweI GCATC 4 cut(s) 436, 511, 610, 826
MaeI CTAG 4 cut(s) 260, 573, 1689, 1806
MaeIII GTNAC 2 cut(s) 44, 1552
MalI GATC 9 cut(s) 642, 984, 993, 1314, 1380, 1509, 1727, 1815, 1839
MboI GATC 9 cut(s) 640, 982, 991, 1312, 1378, 1507, 1725, 1813, 1837
MboII GAAGA 9 cut(s) 187, 193, 337, 965, 1229, 1352, 1790, 1808, 1855
MfeI CAATTG 1 cut(s) 88
MflI RGATCY 2 cut(s) 1725, 1837
MhlI GDGCHC 2 cut(s) 358, 1780
Mly113I GGCGCC 1 cut(s) 1186
MlyI GAGTC 2 cut(s) 1495, 1627
MmeI TCCRAC 7 cut(s) 586, 637, 691, 745, 799, 877, 901
Mph1103I ATGCAT 1 cut(s) 390
MroXI GAANNNNTTC 1 cut(s) 960
MseI TTAA 5 cut(s) 548, 1332, 1404, 1656, 1791
MslI CAYNNNNRTG 4 cut(s) 42, 507, 672, 1109
MspA1I CMGCKG 1 cut(s) 917
MspI CCGG 1 cut(s) 1637
MspR9I CCNGG 4 cut(s) 188, 426, 561, 1416
MteI GCGCNGCGC 1 cut(s) 1189
MunI CAATTG 1 cut(s) 88
Mva1269I GAATGC 1 cut(s) 1855
MvaI CCWGG 4 cut(s) 188, 426, 561, 1416
MvnI CGCG 2 cut(s) 780, 1191
MwoI GCNNNNNNNGC 4 cut(s) 177, 298, 845, 1859
NarI GGCGCC 1 cut(s) 1186
NdeII GATC 9 cut(s) 640, 982, 991, 1312, 1378, 1507, 1725, 1813, 1837
NlaIV GGNNCC 3 cut(s) 31, 185, 1187
NmuCI GTSAC 2 cut(s) 44, 1552
NruI TCGCGA 1 cut(s) 780
NsiI ATGCAT 1 cut(s) 390
NspI RCATGY 3 cut(s) 41, 1097, 1326
PagI TCATGA 5 cut(s) 697, 751, 805, 1177, 1504
PceI AGGCCT 1 cut(s) 292
PciI ACATGT 2 cut(s) 1093, 1322
PciSI GCTCTTC 2 cut(s) 170, 1242
PctI GAATGC 1 cut(s) 1855
PdmI GAANNNNTTC 1 cut(s) 960
PfeI GAWTC 8 cut(s) 599, 647, 664, 701, 755, 809, 1454, 1610
PflFI GACNNNGTC 1 cut(s) 1534
PflMI CCANNNNNTGG 1 cut(s) 497
PfoI TCCNGGA 1 cut(s) 559
PkrI GCNGC 8 cut(s) 916, 940, 943, 970, 1190, 1413, 1663, 1694
PleI GAGTC 2 cut(s) 1495, 1627
PluTI GGCGCC 1 cut(s) 1189
PpsI GAGTC 2 cut(s) 1495, 1627
PpuMI RGGWCCY 1 cut(s) 30
PscI ACATGT 2 cut(s) 1093, 1322
Psp124BI GAGCTC 1 cut(s) 358
Psp5II RGGWCCY 1 cut(s) 30
Psp6I CCWGG 4 cut(s) 186, 424, 559, 1414
PspGI CCWGG 4 cut(s) 186, 424, 559, 1414
PspN4I GGNNCC 3 cut(s) 31, 185, 1187
PspPI GGNCC 4 cut(s) 30, 184, 488, 1076
PspPPI RGGWCCY 1 cut(s) 30
PsuI RGATCY 2 cut(s) 1725, 1837
PsyI GACNNNGTC 1 cut(s) 1534
PvuII CAGCTG 1 cut(s) 917
RruI TCGCGA 1 cut(s) 780
RsaI GTAC 4 cut(s) 194, 266, 678, 1132
RsaNI GTAC 4 cut(s) 193, 265, 677, 1131
RseI CAYNNNNRTG 4 cut(s) 42, 507, 672, 1109
SacI GAGCTC 1 cut(s) 358
SapI GCTCTTC 2 cut(s) 170, 1242
SaqAI TTAA 5 cut(s) 548, 1332, 1404, 1656, 1791
SatI GCNGC 8 cut(s) 915, 939, 942, 969, 1189, 1412, 1662, 1693
Sau3AI GATC 9 cut(s) 640, 982, 991, 1312, 1378, 1507, 1725, 1813, 1837
Sau96I GGNCC 4 cut(s) 30, 184, 488, 1076
ScaI AGTACT 1 cut(s) 194
SchI GAGTC 2 cut(s) 1495, 1627
ScrFI CCNGG 4 cut(s) 188, 426, 561, 1416
SduI GDGCHC 2 cut(s) 358, 1780
SfaNI GCATC 4 cut(s) 436, 511, 610, 826
SfoI GGCGCC 1 cut(s) 1187
SinI GGWCC 4 cut(s) 30, 184, 488, 1076
SmiMI CAYNNNNRTG 4 cut(s) 42, 507, 672, 1109
SseBI AGGCCT 1 cut(s) 292
SsiI CCGC 3 cut(s) 110, 1074, 1189
SspDI GGCGCC 1 cut(s) 1185
SspMI CTAG 4 cut(s) 260, 573, 1689, 1806
SstI GAGCTC 1 cut(s) 358
StuI AGGCCT 1 cut(s) 292
StyD4I CCNGG 4 cut(s) 186, 424, 559, 1414
StyI CCWWGG 2 cut(s) 25, 1137
TaaI ACNGT 8 cut(s) 316, 586, 892, 932, 1276, 1401, 1469, 1605
TaqI TCGA 5 cut(s) 5, 167, 505, 1336, 1739
TatI WGTACW 1 cut(s) 192
TauI GCSGC 1 cut(s) 1191
TfiI GAWTC 8 cut(s) 599, 647, 664, 701, 755, 809, 1454, 1610
Tru1I TTAA 5 cut(s) 548, 1332, 1404, 1656, 1791
Tru9I TTAA 5 cut(s) 548, 1332, 1404, 1656, 1791
TscAI CASTG 6 cut(s) 49, 211, 283, 1279, 1404, 1557
TseFI GTSAC 2 cut(s) 44, 1552
TseI GCWGC 7 cut(s) 914, 938, 941, 968, 1411, 1661, 1692
Tsp45I GTSAC 2 cut(s) 44, 1552
TspDTI ATGAA 8 cut(s) 257, 332, 338, 461, 555, 1142, 1665, 1693
TspGWI ACGGA 1 cut(s) 425
TspRI CASTG 6 cut(s) 49, 211, 283, 1279, 1404, 1557
Tth111I GACNNNGTC 1 cut(s) 1534
Van91I CCANNNNNTGG 1 cut(s) 497
VpaK11BI GGWCC 4 cut(s) 30, 184, 488, 1076
XagI CCTNNNNNAGG 1 cut(s) 684
XapI RAATTY 6 cut(s) 1459, 1573, 1595, 1652, 1700, 1760
XbaI TCTAGA 1 cut(s) 1805
XceI RCATGY 3 cut(s) 41, 1097, 1326
XmiI GTMKAC 1 cut(s) 1420
XmnI GAANNNNTTC 1 cut(s) 960
XspI CTAG 4 cut(s) 260, 573, 1689, 1806
ZrmI AGTACT 1 cut(s) 194
Zsp2I ATGCAT 1 cut(s) 390
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.