Rorug01G0117600

No apical meristem (NAM) protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0005817
Physical Location & Seq
Forward (+)
20659074 .. 20661339
2266 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0117600.1

Sequence Viewer

Length: 1791 bp
ATGGGAATAAGTGGGATAAGGAGCTTCCTCTCCCTGTGTGGGTGGGTGTCAATTATAGCCTTATCTGTTCTTGGCTTATCTACCGCCTCTTCCTCCGGCAAGATCCACACAACAAGTGTTCTGGGCGATAACGGTACGTGTGTCCCTTCTTCCTGCGGCGACGTCCACAACATAGGGTACCCTTTTCGACTACAACATGATCCACAGCACTGTGGCAACCAAAATTTCACTTTGGAATGTCACAACAACATCACAGTGCTGCGCCTTTTTTCTCACGAGTACTACGTGAAGGCCATTGACTACGATTACAGCAGAATCCGAGTGGTAGATCCTGGCCTTGAGAAGAACAACTGCGCCTCCCTTCCTCGTTTTCCTTTGGCCTATTCTAATTTCAGTTATAATTTAAGTGAAACATTCTGGCAAATAAATCCAGATCTTGTAACTTTCTTGAAGTGTGCAAATCCAGTGAATTCTTCCCTGTATGTGAACACGGCTCCCTGTATTAAATCGGAAGGGTATGGTTATGCCATTCTAGGCGATATGCCCCTGGAAGATGTGGAGAATGGGTGCAGTATAGATTTGATTATGATCACTTCGATGCATGGAAAGGACCGAAACATTTCCTATGAAGATATACACAATGAACTGGTGTATGGCTTTGAGCTTAACTATCATCTGCCCTATACTTATGTGCCCGATTATGGTACTTACTATTGCCACGGTCAATGGGGATACCACGGAACATGTTATCCGCGCAGCATCCCAGGTTTCTTTCAACTTGTGTGGAATGCGCTTAGAGTCAATCTTTACTTGGAGGCTCCCAGTGTTGTAGGGGTAAAACTTATATTTGGAGGTCCATTTGTGATTGCACTTCTGATATACAAGTGGCGAAGAAGACATTGGTCAACCTACAACACTATAGAAGATTTTCTGCATAGTGACAATTTCATCCCTATAAGGTACTCCTACTCCAACATTAAGAAAATGTCTGATGGATTCAAAGATAAGTTGGGCGAAGGGGGTTTTGGGTCTGTATTTAAAGGCAAATTACGAAGTGGCCACTTTGGAGCCATTAAGCTGTTAGGCAAGTCTAATGCTAATGGGGAAGATTTCATGAGTGAAGTAGCTACTATTGGAAGGATTCATCATGTTAATGTGGTGCAGCTTGTTGGTTACTGTGTTGAGGGTTCAAAGTGCGCTTTAGTATATGATTTCATGCCAAATGGGTCTCTTGATAAATACATTTACTCTAAAGAAGGATCCATCACTTTAGGTTATAGGAAAATGTATGAGATTGCAGTTGGAGTAGCTCAGGGTATTGAATATTTGCATCAAGCAAGAGGCACCATGGGATACATTGCTCCCGAGTTGTTTTATAAAAACATTGGTGGTGTTTCATACAAAGCTGATGTCTATAGTTTTGGAATGTTGTTGATGGAAATGGCAAGCAGAAGGAAAAATCTAAATGCATTTGTAGATCACTCAAGCCAACTTTACTTCCCCTCATGGGTGCATGATCAATATAATGATGGTAAGGACTTGGAGATTGGCGATGCTACAACAGAGGAAAAGAAATTAATTAAAAAAATGATTGTAACTGCCTTGTGGTGTATTCAAATGAAACCAAGTGATCGACCTTCAATGAAGAGAGTCACACAGATGCTCGTAGGAGATGTTAAATACCTAGAAATGCCGCCAAAGCCTTCTCTATGCCCACAACCAATGCCCGTAAGCAATTTGAATCCAGTATGTTCAAATGTGGAGCTAACATGTACTCTTTCAGCTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0001067 GO:0002237 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006325 GO:0006351 GO:0006355 GO:0006396 GO:0006464 GO:0006482 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009642 GO:0009644 GO:0009648 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009962 GO:0009987 GO:0010033 GO:0010228 GO:0010267 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016569 GO:0016570 GO:0016577 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022414 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0034720 GO:0035194 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048229 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060966 GO:0060968 GO:0061458 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070918 GO:0070988 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1901698 GO:1901699 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1990837 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

596

Amino Acids

67.01

Weight (kDa)

7.24

Isoelectric Point (pI)

40.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 47 - 110 1.8e-17 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 333 - 446 1.5e-20 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 334 - 446 1.2e-15 Protein kinase domain
Pkinase PF00069 447 - 553 1.3e-06 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 450 - 555 4.8e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 399, 1377
AatII GACGTC 1 cut(s) 165
Acc65I GGTACC 1 cut(s) 177
AccB1I GGYRCC 2 cut(s) 177, 1343
AccII CGCG 1 cut(s) 754
AciI CCGC 4 cut(s) 84, 156, 752, 1694
AclWI GGATC 5 cut(s) 97, 194, 323, 1254, 1267
AcoI YGGCCR 1 cut(s) 1057
AcsI RAATTY 2 cut(s) 223, 469
AcyI GRCGYC 1 cut(s) 162
AfaI GTAC 6 cut(s) 136, 179, 281, 706, 962, 1774
AfiI CCNNNNNNNGG 3 cut(s) 39, 701, 1507
AflIII ACRYGT 3 cut(s) 137, 743, 1769
AgsI TTSAA 9 cut(s) 451, 776, 1000, 1191, 1322, 1616, 1641, 1741, 1755
AjnI CCWGG 3 cut(s) 331, 546, 763
AjuI GAANNNNNNNTTGG 4 cut(s) 883, 915, 1008, 1040
AloI GAACNNNNNNTCC 2 cut(s) 733, 765
AluBI AGCT 9 cut(s) 24, 664, 1078, 1127, 1165, 1310, 1406, 1765, 1784
AluI AGCT 9 cut(s) 24, 664, 1078, 1127, 1165, 1310, 1406, 1765, 1784
Alw26I GTCTC 1 cut(s) 1233
AlwI GGATC 5 cut(s) 97, 194, 323, 1254, 1267
Ama87I CYCGRG 1 cut(s) 1364
AoxI GGCC 4 cut(s) 291, 334, 378, 1057
ApeKI GCWGC 3 cut(s) 259, 756, 1162
ApoI RAATTY 2 cut(s) 223, 469
ArsI GACNNNNNNTTYG 2 cut(s) 1395, 1427
AseI ATTAAT 1 cut(s) 1577
Asp700I GAANNNNTTC 2 cut(s) 619, 927
Asp718I GGTACC 1 cut(s) 177
AspLEI GCGC 5 cut(s) 264, 356, 756, 793, 1199
AspS9I GGNCC 2 cut(s) 610, 854
AvaI CYCGRG 1 cut(s) 1364
AvaII GGWCC 2 cut(s) 610, 854
BaeGI GKGCMC 1 cut(s) 696
BaeI ACNNNNGTAYC 2 cut(s) 126, 159
BalI TGGCCA 1 cut(s) 1059
BamHI GGATCC 1 cut(s) 1259
BanI GGYRCC 2 cut(s) 177, 1343
BauI CACGAG 1 cut(s) 275
BbsI GAAGAC 1 cut(s) 901
BbvI GCAGC 3 cut(s) 246, 768, 1174
BccI CCATC 4 cut(s) 986, 1271, 1429, 1523
BceAI ACGGC 1 cut(s) 507
BciT130I CCWGG 3 cut(s) 333, 548, 765
BciVI GTATCC 2 cut(s) 725, 1346
BclI TGATCA 2 cut(s) 588, 1516
BcoDI GTCTC 1 cut(s) 1233
BfaI CTAG 3 cut(s) 533, 1685, 1785
BfmI CTRYAG 2 cut(s) 918, 1414
BfuI GTATCC 2 cut(s) 725, 1346
BglII AGATCT 1 cut(s) 433
BisI GCNGC 5 cut(s) 157, 260, 757, 1163, 1694
BlsI GCNGC 5 cut(s) 158, 261, 758, 1164, 1695
BmcAI AGTACT 1 cut(s) 281
Bme1390I CCNGG 3 cut(s) 333, 548, 765
Bme18I GGWCC 2 cut(s) 610, 854
BmeT110I CYCGRG 1 cut(s) 1364
BmgT120I GGNCC 2 cut(s) 610, 854
BmiI GGNNCC 6 cut(s) 179, 495, 819, 1069, 1261, 1345
BmrFI CCNGG 3 cut(s) 333, 548, 765
BmrI ACTGGG 1 cut(s) 816
BmsI GCATC 5 cut(s) 588, 768, 1339, 1543, 1650
BmuI ACTGGG 1 cut(s) 816
BoxI GACNNNNGTC 1 cut(s) 901
BpiI GAAGAC 1 cut(s) 901
Bpu10I CCTNAGC 1 cut(s) 1311
BpuEI CTTGAG 2 cut(s) 359, 1468
BsaAI YACGTR 2 cut(s) 138, 286
BsaBI GATNNNNATC 1 cut(s) 587
BsaHI GRCGYC 1 cut(s) 162
BsaI GGTCTC 1 cut(s) 1233
BsaJI CCNNGG 5 cut(s) 546, 718, 736, 763, 1347
BsaXI ACNNNNNCTCC 6 cut(s) 341, 371, 551, 581, 953, 983
Bsc4I CCNNNNNNNGG 3 cut(s) 39, 701, 1507
Bse1I ACTGG 4 cut(s) 464, 651, 822, 1745
Bse3DI GCAATG 1 cut(s) 1356
Bse8I GATNNNNATC 1 cut(s) 587
BseBI CCWGG 3 cut(s) 333, 548, 765
BseDI CCNNGG 5 cut(s) 546, 718, 736, 763, 1347
BseGI GGATG 2 cut(s) 759, 948
BseJI GATNNNNATC 1 cut(s) 587
BseLI CCNNNNNNNGG 3 cut(s) 39, 701, 1507
BseMI GCAATG 1 cut(s) 1356
BseMII CTCAG 1 cut(s) 1325
BseNI ACTGG 4 cut(s) 464, 651, 822, 1745
BseSI GKGCMC 1 cut(s) 696
BseXI GCAGC 3 cut(s) 246, 768, 1174
BsgI GTGCAG 2 cut(s) 589, 1181
Bsh1236I CGCG 1 cut(s) 754
BshFI GGCC 4 cut(s) 293, 336, 380, 1059
BshNI GGYRCC 2 cut(s) 177, 1343
BsiHKCI CYCGRG 1 cut(s) 1364
BsiSI CCGG 1 cut(s) 96
BslFI GGGAC 1 cut(s) 128
BslI CCNNNNNNNGG 3 cut(s) 39, 701, 1507
BsmAI GTCTC 1 cut(s) 1233
BsmFI GGGAC 1 cut(s) 128
BsmI GAATGC 1 cut(s) 793
BsnI GGCC 4 cut(s) 293, 336, 380, 1059
Bso31I GGTCTC 1 cut(s) 1233
BsoBI CYCGRG 1 cut(s) 1364
Bsp1286I GDGCHC 1 cut(s) 696
Bsp143I GATC 9 cut(s) 102, 199, 328, 433, 588, 1259, 1477, 1516, 1630
Bsp19I CCATGG 1 cut(s) 1347
BspACI CCGC 4 cut(s) 84, 156, 752, 1694
BspANI GGCC 4 cut(s) 293, 336, 380, 1059
BspCNI CTCAG 1 cut(s) 1324
BspFNI CGCG 1 cut(s) 754
BspHI TCATGA 1 cut(s) 1113
BspLI GGNNCC 6 cut(s) 179, 495, 819, 1069, 1261, 1345
BspPI GGATC 5 cut(s) 97, 194, 323, 1254, 1267
BspT107I GGYRCC 2 cut(s) 177, 1343
BspTNI GGTCTC 1 cut(s) 1233
BsrDI GCAATG 1 cut(s) 1356
BsrI ACTGG 4 cut(s) 464, 651, 822, 1745
BssECI CCNNGG 5 cut(s) 546, 718, 736, 763, 1347
BssMI GATC 9 cut(s) 102, 199, 328, 433, 588, 1259, 1477, 1516, 1630
BssNI GRCGYC 1 cut(s) 162
BssSI CACGAG 1 cut(s) 275
BssT1I CCWWGG 1 cut(s) 1347
Bst2BI CACGAG 1 cut(s) 275
Bst2UI CCWGG 3 cut(s) 333, 548, 765
Bst4CI ACNGT 5 cut(s) 134, 212, 256, 722, 1178
Bst6I CTCTTC 2 cut(s) 94, 1640
BstACI GRCGYC 1 cut(s) 162
BstBAI YACGTR 2 cut(s) 138, 286
BstC8I GCNNGC 1 cut(s) 1447
BstDEI CTNAG 2 cut(s) 794, 1311
BstDSI CCRYGG 3 cut(s) 718, 736, 1347
BstF5I GGATG 2 cut(s) 759, 948
BstFNI CGCG 1 cut(s) 754
BstHHI GCGC 5 cut(s) 264, 356, 756, 793, 1199
BstKTI GATC 9 cut(s) 105, 202, 331, 436, 591, 1262, 1480, 1519, 1633
BstMAI GTCTC 1 cut(s) 1233
BstMBI GATC 9 cut(s) 102, 199, 328, 433, 588, 1259, 1477, 1516, 1630
BstMWI GCNNNNNNNGC 1 cut(s) 1699
BstNI CCWGG 3 cut(s) 333, 548, 765
BstNSI RCATGY 2 cut(s) 747, 1773
BstPAI GACNNNNGTC 1 cut(s) 901
BstSCI CCNGG 3 cut(s) 331, 546, 763
BstSFI CTRYAG 2 cut(s) 918, 1414
BstSLI GKGCMC 1 cut(s) 696
BstUI CGCG 1 cut(s) 754
BstV1I GCAGC 3 cut(s) 246, 768, 1174
BstV2I GAAGAC 1 cut(s) 901
BstX2I RGATCY 4 cut(s) 102, 328, 433, 1259
BstYI RGATCY 4 cut(s) 102, 328, 433, 1259
BsuI GTATCC 2 cut(s) 725, 1346
BsuRI GGCC 4 cut(s) 293, 336, 380, 1059
BtgI CCRYGG 3 cut(s) 718, 736, 1347
BtgZI GCGATG 1 cut(s) 1566
BtsCI GGATG 2 cut(s) 759, 948
BtsIMutI CAGTG 4 cut(s) 208, 261, 471, 829
Cac8I GCNNGC 1 cut(s) 1447
CciI TCATGA 1 cut(s) 1113
CfoI GCGC 5 cut(s) 264, 356, 756, 793, 1199
Cfr13I GGNCC 2 cut(s) 610, 854
Csp6I GTAC 6 cut(s) 135, 178, 280, 705, 961, 1773
CspCI CAANNNNNGTGG 2 cut(s) 764, 799
CviQI GTAC 6 cut(s) 135, 178, 280, 705, 961, 1773
DdeI CTNAG 2 cut(s) 794, 1311
DpnI GATC 9 cut(s) 104, 201, 330, 435, 590, 1261, 1479, 1518, 1632
DpnII GATC 9 cut(s) 102, 199, 328, 433, 588, 1259, 1477, 1516, 1630
DraI TTTAAA 1 cut(s) 1039
EaeI YGGCCR 1 cut(s) 1057
Eam1104I CTCTTC 2 cut(s) 94, 1640
EarI CTCTTC 2 cut(s) 94, 1640
Eco130I CCWWGG 1 cut(s) 1347
Eco31I GGTCTC 1 cut(s) 1233
Eco47I GGWCC 2 cut(s) 610, 854
Eco88I CYCGRG 1 cut(s) 1364
EcoRI GAATTC 1 cut(s) 469
EcoRII CCWGG 3 cut(s) 331, 546, 763
EcoT14I CCWWGG 1 cut(s) 1347
EcoT22I ATGCAT 2 cut(s) 603, 1471
ErhI CCWWGG 1 cut(s) 1347
FaqI GGGAC 1 cut(s) 128
FbaI TGATCA 2 cut(s) 588, 1516
Fnu4HI GCNGC 5 cut(s) 157, 260, 757, 1163, 1694
FokI GGATG 2 cut(s) 746, 935
Fsp4HI GCNGC 5 cut(s) 157, 260, 757, 1163, 1694
FspBI CTAG 3 cut(s) 533, 1685, 1785
GlaI GCGC 5 cut(s) 263, 355, 755, 792, 1198
GluI GCNGC 5 cut(s) 157, 260, 757, 1163, 1694
HaeIII GGCC 4 cut(s) 293, 336, 380, 1059
HapII CCGG 1 cut(s) 96
HhaI GCGC 5 cut(s) 264, 356, 756, 793, 1199
Hin1I GRCGYC 1 cut(s) 162
Hin6I GCGC 5 cut(s) 262, 354, 754, 791, 1197
HinP1I GCGC 5 cut(s) 262, 354, 754, 791, 1197
HincII GTYRAC 1 cut(s) 906
HindII GTYRAC 1 cut(s) 906
HinfI GANTC 6 cut(s) 315, 798, 996, 1141, 1650, 1741
HpaII CCGG 1 cut(s) 96
Hpy166II GTNNAC 3 cut(s) 166, 487, 906
Hpy188I TCNGA 4 cut(s) 320, 511, 876, 991
Hpy188III TCNNGA 6 cut(s) 275, 431, 448, 1114, 1232, 1364
Hpy8I GTNNAC 3 cut(s) 166, 487, 906
Hpy99I CGWCG 1 cut(s) 164
HpyCH4III ACNGT 5 cut(s) 134, 212, 256, 722, 1178
HpyCH4IV ACGT 3 cut(s) 137, 162, 285
HpyF10VI GCNNNNNNNGC 1 cut(s) 1699
HpyF3I CTNAG 2 cut(s) 794, 1311
HpySE526I ACGT 3 cut(s) 137, 162, 285
Hsp92I GRCGYC 1 cut(s) 162
HspAI GCGC 5 cut(s) 262, 354, 754, 791, 1197
KpnI GGTACC 1 cut(s) 181
Ksp22I TGATCA 2 cut(s) 588, 1516
Kzo9I GATC 9 cut(s) 102, 199, 328, 433, 588, 1259, 1477, 1516, 1630
LmnI GCTCC 6 cut(s) 21, 499, 823, 1067, 1366, 1762
Lsp1109I GCAGC 3 cut(s) 246, 768, 1174
LweI GCATC 5 cut(s) 588, 768, 1339, 1543, 1650
MaeI CTAG 3 cut(s) 533, 1685, 1785
MaeII ACGT 3 cut(s) 137, 162, 285
MaeIII GTNAC 6 cut(s) 239, 439, 938, 1172, 1594, 1651
MalI GATC 9 cut(s) 104, 201, 330, 435, 590, 1261, 1479, 1518, 1632
MboI GATC 9 cut(s) 102, 199, 328, 433, 588, 1259, 1477, 1516, 1630
MflI RGATCY 4 cut(s) 102, 328, 433, 1259
MhlI GDGCHC 1 cut(s) 696
MlsI TGGCCA 1 cut(s) 1059
MluNI TGGCCA 1 cut(s) 1059
MlyI GAGTC 2 cut(s) 807, 1659
MmeI TCCRAC 2 cut(s) 996, 1282
Mox20I TGGCCA 1 cut(s) 1059
Mph1103I ATGCAT 2 cut(s) 603, 1471
MroXI GAANNNNTTC 2 cut(s) 619, 927
MscI TGGCCA 1 cut(s) 1059
MslI CAYNNNNRTG 4 cut(s) 254, 596, 1152, 1658
Msp20I TGGCCA 1 cut(s) 1059
MspI CCGG 1 cut(s) 96
MspR9I CCNGG 3 cut(s) 333, 548, 765
Mva1269I GAATGC 1 cut(s) 793
MvaI CCWGG 3 cut(s) 333, 548, 765
MvnI CGCG 1 cut(s) 754
MwoI GCNNNNNNNGC 1 cut(s) 1699
NcoI CCATGG 1 cut(s) 1347
NdeII GATC 9 cut(s) 102, 199, 328, 433, 588, 1259, 1477, 1516, 1630
NlaIV GGNNCC 6 cut(s) 179, 495, 819, 1069, 1261, 1345
NmuCI GTSAC 3 cut(s) 239, 938, 1651
NsiI ATGCAT 2 cut(s) 603, 1471
NspI RCATGY 2 cut(s) 747, 1773
PacI TTAATTAA 1 cut(s) 1581
PagI TCATGA 1 cut(s) 1113
PciI ACATGT 2 cut(s) 743, 1769
PcsI WCGNNNNNNNCGW 1 cut(s) 282
PctI GAATGC 1 cut(s) 793
PdmI GAANNNNTTC 2 cut(s) 619, 927
PfeI GAWTC 4 cut(s) 315, 996, 1141, 1741
PkrI GCNGC 5 cut(s) 158, 261, 758, 1164, 1695
PleI GAGTC 2 cut(s) 806, 1658
PpsI GAGTC 2 cut(s) 806, 1658
Ppu21I YACGTR 2 cut(s) 138, 286
PscI ACATGT 2 cut(s) 743, 1769
PshAI GACNNNNGTC 1 cut(s) 901
PshBI ATTAAT 1 cut(s) 1577
PsiI TTATAA 2 cut(s) 399, 1377
Psp6I CCWGG 3 cut(s) 331, 546, 763
PspGI CCWGG 3 cut(s) 331, 546, 763
PspN4I GGNNCC 6 cut(s) 179, 495, 819, 1069, 1261, 1345
PspPI GGNCC 2 cut(s) 610, 854
PsuI RGATCY 4 cut(s) 102, 328, 433, 1259
RsaI GTAC 6 cut(s) 136, 179, 281, 706, 962, 1774
RsaNI GTAC 6 cut(s) 135, 178, 280, 705, 961, 1773
RseI CAYNNNNRTG 4 cut(s) 254, 596, 1152, 1658
SatI GCNGC 5 cut(s) 157, 260, 757, 1163, 1694
Sau3AI GATC 9 cut(s) 102, 199, 328, 433, 588, 1259, 1477, 1516, 1630
Sau96I GGNCC 2 cut(s) 610, 854
ScaI AGTACT 1 cut(s) 281
SchI GAGTC 2 cut(s) 807, 1659
ScrFI CCNGG 3 cut(s) 333, 548, 765
SduI GDGCHC 1 cut(s) 696
SfaNI GCATC 5 cut(s) 588, 768, 1339, 1543, 1650
SfcI CTRYAG 2 cut(s) 918, 1414
SinI GGWCC 2 cut(s) 610, 854
SmiMI CAYNNNNRTG 4 cut(s) 254, 596, 1152, 1658
SmlI CTYRAG 2 cut(s) 338, 1483
SmoI CTYRAG 2 cut(s) 338, 1483
SsiI CCGC 4 cut(s) 84, 156, 752, 1694
SspI AATATT 1 cut(s) 1325
SspMI CTAG 3 cut(s) 533, 1685, 1785
StyD4I CCNGG 3 cut(s) 331, 546, 763
StyI CCWWGG 1 cut(s) 1347
TaaI ACNGT 5 cut(s) 134, 212, 256, 722, 1178
TaiI ACGT 3 cut(s) 140, 165, 288
TaqI TCGA 3 cut(s) 187, 596, 1633
TaqII GACCGA 1 cut(s) 627
TatI WGTACW 2 cut(s) 279, 1772
TauI GCSGC 2 cut(s) 159, 1696
TfiI GAWTC 4 cut(s) 315, 996, 1141, 1741
TscAI CASTG 4 cut(s) 215, 261, 471, 829
TseFI GTSAC 3 cut(s) 239, 938, 1651
TseI GCWGC 3 cut(s) 259, 756, 1162
Tsp45I GTSAC 3 cut(s) 239, 938, 1651
TspDTI ATGAA 9 cut(s) 642, 657, 937, 1102, 1133, 1204, 1386, 1634, 1658
TspGWI ACGGA 1 cut(s) 753
TspRI CASTG 4 cut(s) 215, 261, 471, 829
VpaK11BI GGWCC 2 cut(s) 610, 854
VspI ATTAAT 1 cut(s) 1577
XapI RAATTY 2 cut(s) 223, 469
XceI RCATGY 2 cut(s) 747, 1773
XmnI GAANNNNTTC 2 cut(s) 619, 927
XspI CTAG 3 cut(s) 533, 1685, 1785
ZraI GACGTC 1 cut(s) 163
ZrmI AGTACT 1 cut(s) 281
Zsp2I ATGCAT 2 cut(s) 603, 1471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.