Rmu_sc0000574.1_g000048

No apical meristem (NAM) protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000574.1
OG0005817
Physical Location & Seq
Forward (+)
175662 .. 186455
10794 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000574.1_g000048.1.cds

Sequence Viewer

Length: 3405 bp
atgttctggaatgatgatgtgaaggtagaggagggtacgacatcacaacatcatattcatgtcatggttgatggaggtcctggaaaccctaggtggagacttacaggtttttatggatttgctcgaacggtggatagagataaatcatgtgagaagaaagatggtccgattagggcagagcggcagatgcgtggtttcagagaagcccaaggcatctcccaccaagtgattttgatcatgtgccaatactgctacaagctagtattgttcctcttcccaaatctcctcgtcatcaccgcttcaaatttgaagcatattggtttgcaacatgaagaatgtgatggtgttgtacaccaagcctggcagacagatgtgtccggtttgccaatgtatcaattgtcaaagaagatagcttatactagaatgcatttggatgcttggcagaggaagacgtttaagggcagacagatgcaaatgttaggggttcgagcacgtttggaggagttgctagatacaacgctctctgatgctgtgattatggagaagaagcaattgtttgaacgtctccaaaccttattatctcaggaagaatctttctggcgacagagttcgaatgtcacttggttgaaggatggtgatcgtaacactggttattttcactggaaggcagcaaatagaaataggaaaaatactatacatggtctgtttaatgaggctggtgagtggtgtgaggatgatgaagggttggagcgagtgagtgtttttgtgcctggcaggttaattactgataatatcattgtcgctaatgaacttgctcattttgttcataacaaaagggatggtggtgatgggtgtatggctcttaaactagacctaagcaaagcctatgatagaatggaatgggtttttcttaagagggtgatggaaaggtttggttttgatctgcaaaagcaagaattgggattgctccctgggattgagatttgcagtgaagcccctcgggtgaatcatttactatttgctaatgatagcatgatttatgctaacgctactctggaggactgttaccagatacaggatgttatcgaaacatatggtagggcctcaggtcaattggttaactttgataaaagctctattgttctcagtaaaaatgtttcagatgttatgaaagatgaggtgtctagcctattgggagttgaggtggtgacttctcatgaaaaatatttgggtcttccaacgtatgtggggagaaagaaaactgctaccttccagtatatcaaggagaatttgtccaagaaggtttccaattggcaaggaaaatttttgagtggtgcaggtagagacattctcatcagagtggtggcacaagctcttccagcttatgcaatgagtgtcttcaaattaacaaaaaatttctgtgaggatcttgaacaactttgtgcaaagttctggttggggagtactcttgataaaagaaaaattcactggaagacttggaaggctttgtgcaatcctaaagaggaaggagggctaggttttcgtagcttatcagaatttaattctgctatgctagccaaacaagcatggcgtgtgatcagtaatcctcaatcgttgatagctctactctttaaagctaagtactatccagaaggttcattttggacagcttcatcccatgcttctccttcttattcctggaggagtatcttttccacaagggatttgataaggaaaggcacttattggcagataggtgatgggacattggtgaacgtatggagggattcgtgggttctgggtttgctggattgtaagcctagagaaggtaatttggctatgaatgaagtcaatagggagttggaaacaacattgcatttatgtcatgactgtccgttcactagacaagtgctgcaaacacatggggtgttgtcacaggtttattataatcctcattttgctcatttggatctgttggaatggattagttcttgtgcaagagacttatctttacagttacttgaccaccacaaccacaaccaccaccgccgccgccgccgcggaattaaactcatgggtcacgagctaacgccgtcgaccatcactcccccactctcaaaacctccggccgcgcccactgccttggctccgggcttccgatttcacccaaccgacgaagaactcgtcatttactacctcaaacgcaaagtctgccgcaaacccttcaaattcaacgcgatctccgatgtcgatatctacaagagcgaaccttgggacctcgcatgtaagtcgagcttgaagagcagggaccaggagtactatttcttcagtgcattggacaagaagtatggaaatggggcaaggatgaatagggctacacatctagggtactggaaggccactggaaatgacaggcctgtcaagcacaacaacaagactgttgggatgaagaaaactttggtttttcatagtggcagagctccagatggcaagaggactaattgggtcatgcatgagtataggcttgttgatacggaaatggaaaaacctggaaatggtgttcctcaggatgcgtatgtgttgtgtagggtatttcataaaagtaatataggaccaccaaatgggcatcgatatgcgccttttgttgaggaggaatgggatgatgaaaagttaactttcgttcctggagaagtggctagggatgacacagtagttagtcgtgattctgttggaaatcgttgcgatgcagttaaggtaggaaatgatcatgattccgttgttggaggaaatcatcgggatgcacctatggtaggaaatggtcatgattcagttgttggaggtgctactcgtgatgcagttgtagcaaatggttgtcatgcagttgttgtagcaaatggtcgtgatacagttgttggaaatggtcatcatgcagctgttggaggaaatggtcatgctgctgcctgtattgaagaaaaagttcatgctgctgtggatattgatcaaaaagatcatgttgcggcagttgttgaacaaaaagataatgcttctgcaagtattgaacaaaaagatcatgatgtctgtcttggtggcggcccttctgttgatggacatgttcaggacactatgatggaagtagatggtcatggaactaccgaggaaggaaatgttcatggaagcattagaggaaatggtcatgatgggcgcagcgcagggaactattttgtgcaggtttgtgcttttcactctagtaagtcgagcttgaagagcagggaccaggagtactatttcttcagtgcattggacaagaagtatggaaatggggcaaggatgaatagggctacacatctagggtactggaaggccactggaaatgacaggcctgtcaagcacaacaacaagacctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0001067 GO:0002237 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006325 GO:0006351 GO:0006355 GO:0006396 GO:0006464 GO:0006482 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009642 GO:0009644 GO:0009648 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009962 GO:0009987 GO:0010033 GO:0010228 GO:0010267 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016569 GO:0016570 GO:0016577 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022414 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0034720 GO:0035194 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048229 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060966 GO:0060968 GO:0061458 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070918 GO:0070988 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1901698 GO:1901699 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1990837 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

1134

Amino Acids

128.06

Weight (kDa)

8.46

Isoelectric Point (pI)

33.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1947
AasI GACNNNNNNGTC 3 cut(s) 373, 2417, 3380
Acc36I ACCTGC 3 cut(s) 765, 1328, 3217
AccB7I CCANNNNNTGG 1 cut(s) 2621
AccBSI CCGCTC 1 cut(s) 181
AccI GTMKAC 1 cut(s) 2096
AccII CGCG 3 cut(s) 2061, 2132, 2237
AclWI GGATC 2 cut(s) 1434, 1977
AcoI YGGCCR 1 cut(s) 2127
AcsI RAATTY 7 cut(s) 304, 1288, 1322, 1414, 1482, 1556, 2228
AcuI CTGAAG 2 cut(s) 2311, 3274
AdeI CACNNNGTG 1 cut(s) 226
AfaI GTAC 8 cut(s) 37, 351, 1465, 1643, 2318, 2390, 3281, 3353
AfiI CCNNNNNNNGG 5 cut(s) 1075, 1826, 2555, 2621, 2810
AflII CTTAAG 1 cut(s) 911
AflIII ACRYGT 1 cut(s) 3109
AjnI CCWGG 9 cut(s) 79, 359, 769, 970, 1697, 2310, 2548, 2683, 3273
AjuI GAANNNNNNNTTGG 2 cut(s) 2441, 2473
AloI GAACNNNNNNTCC 2 cut(s) 2544, 2576
Alw21I GWGCWC 2 cut(s) 493, 2482
Alw26I GTCTC 4 cut(s) 91, 569, 1338, 1995
AlwI GGATC 2 cut(s) 1434, 1977
Ama87I CYCGRG 1 cut(s) 999
AoxI GGCC 7 cut(s) 1101, 2127, 2397, 2414, 3091, 3360, 3377
ApeKI GCWGC 7 cut(s) 668, 1912, 2930, 2954, 2957, 2984, 3204
ApoI RAATTY 7 cut(s) 304, 1288, 1322, 1414, 1482, 1556, 2228
ArsI GACNNNNNNTTYG 4 cut(s) 2169, 2193, 2201, 2225
Asp700I GAANNNNTTC 1 cut(s) 2976
AspA2I CCTAGG 1 cut(s) 89
AspLEI GCGC 4 cut(s) 2134, 2638, 3204, 3209
AspS9I GGNCC 8 cut(s) 77, 164, 1101, 2275, 2308, 2612, 3092, 3271
AsuC2I CCSGG 1 cut(s) 2151
AsuII TTCGAA 1 cut(s) 611
AsuNHI GCTAGC 1 cut(s) 1573
AvaI CYCGRG 1 cut(s) 999
AvaII GGWCC 6 cut(s) 77, 164, 2275, 2308, 2612, 3271
AvrII CCTAGG 1 cut(s) 89
AxyI CCTNAGG 2 cut(s) 1105, 2565
BaeI ACNNNNGTAYC 2 cut(s) 2895, 2928
BanII GRGCYC 1 cut(s) 2482
BarI GAAGNNNNNNTAC 4 cut(s) 2309, 2341, 3272, 3304
BauI CACGAG 2 cut(s) 2081, 2847
BbsI GAAGAC 4 cut(s) 455, 1226, 1390, 1499
Bbv12I GWGCWC 2 cut(s) 493, 2482
BbvI GCAGC 7 cut(s) 680, 1899, 2941, 2942, 2944, 2971, 3216
BceAI ACGGC 1 cut(s) 2077
BcgI CGANNNNNNTGC 2 cut(s) 2271, 2305
BciT130I CCWGG 9 cut(s) 81, 361, 771, 972, 1699, 2312, 2550, 2685, 3275
BclI TGATCA 4 cut(s) 234, 1596, 2764, 2998
BcnI CCSGG 1 cut(s) 2151
BcoDI GTCTC 4 cut(s) 91, 569, 1338, 1995
BfrI CTTAAG 1 cut(s) 911
BfuAI ACCTGC 3 cut(s) 765, 1328, 3217
BlnI CCTAGG 1 cut(s) 89
BmcAI AGTACT 4 cut(s) 1465, 1643, 2318, 3281
Bme18I GGWCC 6 cut(s) 77, 164, 2275, 2308, 2612, 3271
BmeT110I CYCGRG 1 cut(s) 999
BmgT120I GGNCC 8 cut(s) 77, 164, 1101, 2275, 2308, 2612, 3092, 3271
BmiI GGNNCC 4 cut(s) 2148, 2276, 2309, 3272
BmtI GCTAGC 1 cut(s) 1577
BpiI GAAGAC 4 cut(s) 455, 1226, 1390, 1499
BplI GAGNNNNNCTC 2 cut(s) 1335, 1367
BpmI CTGGAG 4 cut(s) 1076, 1720, 2466, 2706
Bpu10I CCTNAGC 1 cut(s) 875
Bpu14I TTCGAA 1 cut(s) 611
BpuMI CCSGG 1 cut(s) 2151
Bsa29I ATCGAT 1 cut(s) 2629
BsaBI GATNNNNATC 3 cut(s) 233, 636, 2997
BsaJI CCNNGG 9 cut(s) 89, 208, 970, 971, 998, 2059, 2142, 2270, 3153
BsaWI WCCGGW 1 cut(s) 377
BsaXI ACNNNNNCTCC 8 cut(s) 1188, 1218, 1277, 1307, 2089, 2119, 2225, 2255
Bsc4I CCNNNNNNNGG 5 cut(s) 1075, 1826, 2555, 2621, 2810
Bse1I ACTGG 8 cut(s) 652, 665, 1273, 1493, 2396, 2407, 3359, 3370
Bse21I CCTNAGG 2 cut(s) 1105, 2565
Bse3DI GCAATG 2 cut(s) 1395, 1871
Bse8I GATNNNNATC 3 cut(s) 233, 636, 2997
BseBI CCWGG 9 cut(s) 81, 361, 771, 972, 1699, 2312, 2550, 2685, 3275
BseCI ATCGAT 1 cut(s) 2629
BseDI CCNNGG 9 cut(s) 89, 208, 970, 971, 998, 2059, 2142, 2270, 3153
BseJI GATNNNNATC 3 cut(s) 233, 636, 2997
BseLI CCNNNNNNNGG 5 cut(s) 1075, 1826, 2555, 2621, 2810
BseMI GCAATG 2 cut(s) 1395, 1871
BseMII CTCAG 4 cut(s) 596, 1119, 1159, 2579
BseNI ACTGG 8 cut(s) 652, 665, 1273, 1493, 2396, 2407, 3359, 3370
BseRI GAGGAG 5 cut(s) 44, 275, 515, 1717, 2663
BseX3I CGGCCG 1 cut(s) 2127
BseXI GCAGC 7 cut(s) 680, 1899, 2941, 2942, 2944, 2971, 3216
BsgI GTGCAG 2 cut(s) 1356, 3245
Bsh1236I CGCG 3 cut(s) 2061, 2132, 2237
Bsh1285I CGRYCG 1 cut(s) 2130
BshFI GGCC 7 cut(s) 1103, 2129, 2399, 2416, 3093, 3362, 3379
BshVI ATCGAT 1 cut(s) 2629
BsiEI CGRYCG 1 cut(s) 2130
BsiHKAI GWGCWC 2 cut(s) 493, 2482
BsiHKCI CYCGRG 1 cut(s) 999
BsiSI CCGG 3 cut(s) 378, 2126, 2150
BslFI GGGAC 4 cut(s) 1777, 2288, 2321, 3284
BslI CCNNNNNNNGG 5 cut(s) 1075, 1826, 2555, 2621, 2810
BsmAI GTCTC 4 cut(s) 91, 569, 1338, 1995
BsmBI CGTCTC 1 cut(s) 569
BsmFI GGGAC 4 cut(s) 1777, 2288, 2321, 3284
BsmI GAATGC 1 cut(s) 429
BsnI GGCC 7 cut(s) 1103, 2129, 2399, 2416, 3093, 3362, 3379
BsoBI CYCGRG 1 cut(s) 999
Bsp119I TTCGAA 1 cut(s) 611
Bsp1286I GDGCHC 2 cut(s) 493, 2482
Bsp1407I TGTACA 1 cut(s) 349
BspANI GGCC 7 cut(s) 1103, 2129, 2399, 2416, 3093, 3362, 3379
BspCNI CTCAG 4 cut(s) 595, 1118, 1158, 2578
BspDI ATCGAT 1 cut(s) 2629
BspFNI CGCG 3 cut(s) 2061, 2132, 2237
BspHI TCATGA 6 cut(s) 1216, 1885, 2767, 2821, 3070, 3193
BspLI GGNNCC 4 cut(s) 2148, 2276, 2309, 3272
BspMI ACCTGC 3 cut(s) 765, 1328, 3217
BspOI GCTAGC 1 cut(s) 1577
BspPI GGATC 2 cut(s) 1434, 1977
BspQI GCTCTTC 3 cut(s) 1380, 2294, 3257
BspT104I TTCGAA 1 cut(s) 611
BspTI CTTAAG 1 cut(s) 911
BsrBI CCGCTC 1 cut(s) 181
BsrDI GCAATG 2 cut(s) 1395, 1871
BsrGI TGTACA 1 cut(s) 349
BsrI ACTGG 8 cut(s) 652, 665, 1273, 1493, 2396, 2407, 3359, 3370
BssECI CCNNGG 9 cut(s) 89, 208, 970, 971, 998, 2059, 2142, 2270, 3153
BssSI CACGAG 2 cut(s) 2081, 2847
BssT1I CCWWGG 4 cut(s) 89, 208, 2142, 2270
Bst2BI CACGAG 2 cut(s) 2081, 2847
Bst2UI CCWGG 9 cut(s) 81, 361, 771, 972, 1699, 2312, 2550, 2685, 3275
Bst4CI ACNGT 7 cut(s) 130, 1064, 1892, 2016, 2440, 2710, 2908
Bst6I CTCTTC 4 cut(s) 278, 1380, 2294, 3257
BstAFI CTTAAG 1 cut(s) 911
BstAPI GCANNNNNTGC 1 cut(s) 2211
BstAUI TGTACA 1 cut(s) 349
BstBI TTCGAA 1 cut(s) 611
BstC8I GCNNGC 1 cut(s) 1575
BstDEI CTNAG 6 cut(s) 582, 875, 1105, 1145, 1638, 2565
BstDSI CCRYGG 1 cut(s) 2059
BstENI CCTNNNNNAGG 2 cut(s) 1824, 2808
BstFNI CGCG 3 cut(s) 2061, 2132, 2237
BstHHI GCGC 4 cut(s) 2134, 2638, 3204, 3209
BstMAI GTCTC 4 cut(s) 91, 569, 1338, 1995
BstMCI CGRYCG 1 cut(s) 2130
BstNI CCWGG 9 cut(s) 81, 361, 771, 972, 1699, 2312, 2550, 2685, 3275
BstNSI RCATGY 2 cut(s) 2286, 3113
BstUI CGCG 3 cut(s) 2061, 2132, 2237
BstV1I GCAGC 7 cut(s) 680, 1899, 2941, 2942, 2944, 2971, 3216
BstV2I GAAGAC 4 cut(s) 455, 1226, 1390, 1499
BstX2I RGATCY 2 cut(s) 1426, 1969
BstXI CCANNNNNNTGG 1 cut(s) 2143
BstYI RGATCY 2 cut(s) 1426, 1969
BstZI CGGCCG 1 cut(s) 2127
Bsu15I ATCGAT 1 cut(s) 2629
Bsu36I CCTNAGG 2 cut(s) 1105, 2565
BsuRI GGCC 7 cut(s) 1103, 2129, 2399, 2416, 3093, 3362, 3379
BsuTUI ATCGAT 1 cut(s) 2629
BtgI CCRYGG 1 cut(s) 2059
BtgZI GCGATG 1 cut(s) 2757
BtsI GCAGTG 2 cut(s) 994, 2136
BtsIMutI CAGTG 9 cut(s) 645, 658, 994, 1486, 2136, 2335, 2400, 3298, 3363
BveI ACCTGC 3 cut(s) 765, 1328, 3217
Cac8I GCNNGC 1 cut(s) 1575
CciI TCATGA 6 cut(s) 1216, 1885, 2767, 2821, 3070, 3193
CfoI GCGC 4 cut(s) 2134, 2638, 3204, 3209
Cfr13I GGNCC 8 cut(s) 77, 164, 1101, 2275, 2308, 2612, 3092, 3271
Cfr42I CCGCGG 1 cut(s) 2062
ClaI ATCGAT 1 cut(s) 2629
Csp6I GTAC 8 cut(s) 36, 350, 1464, 1642, 2317, 2389, 3280, 3352
CspCI CAANNNNNGTGG 2 cut(s) 1227, 1262
CviQI GTAC 8 cut(s) 36, 350, 1464, 1642, 2317, 2389, 3280, 3352
DdeI CTNAG 6 cut(s) 582, 875, 1105, 1145, 1638, 2565
DraI TTTAAA 1 cut(s) 1633
DraIII CACNNNGTG 1 cut(s) 226
DrdI GACNNNNNNGTC 3 cut(s) 373, 2417, 3380
DseDI GACNNNNNNGTC 3 cut(s) 373, 2417, 3380
EaeI YGGCCR 1 cut(s) 2127
EagI CGGCCG 1 cut(s) 2127
Eam1104I CTCTTC 4 cut(s) 278, 1380, 2294, 3257
EarI CTCTTC 4 cut(s) 278, 1380, 2294, 3257
Ecl136II GAGCTC 1 cut(s) 2480
EclXI CGGCCG 1 cut(s) 2127
Eco130I CCWWGG 4 cut(s) 89, 208, 2142, 2270
Eco147I AGGCCT 2 cut(s) 2416, 3379
Eco24I GRGCYC 1 cut(s) 2482
Eco32I GATATC 1 cut(s) 2254
Eco47I GGWCC 6 cut(s) 77, 164, 2275, 2308, 2612, 3271
Eco52I CGGCCG 1 cut(s) 2127
Eco53kI GAGCTC 1 cut(s) 2480
Eco57I CTGAAG 2 cut(s) 2311, 3274
Eco81I CCTNAGG 2 cut(s) 1105, 2565
Eco88I CYCGRG 1 cut(s) 999
EcoICRI GAGCTC 1 cut(s) 2480
EcoNI CCTNNNNNAGG 2 cut(s) 1824, 2808
EcoO109I RGGNCCY 3 cut(s) 77, 1101, 2275
EcoRII CCWGG 9 cut(s) 79, 359, 769, 970, 1697, 2310, 2548, 2683, 3273
EcoRV GATATC 1 cut(s) 2254
EcoT14I CCWWGG 4 cut(s) 89, 208, 2142, 2270
EcoT22I ATGCAT 2 cut(s) 429, 2514
EcoT38I GRGCYC 1 cut(s) 2482
ErhI CCWWGG 4 cut(s) 89, 208, 2142, 2270
Esp3I CGTCTC 1 cut(s) 569
FalI AAGNNNNNCTT 4 cut(s) 2279, 2311, 3242, 3274
FaqI GGGAC 4 cut(s) 1777, 2288, 2321, 3284
FauNDI CATATG 1 cut(s) 1093
FbaI TGATCA 4 cut(s) 234, 1596, 2764, 2998
FblI GTMKAC 1 cut(s) 2096
FriOI GRGCYC 1 cut(s) 2482
GlaI GCGC 4 cut(s) 2133, 2637, 3203, 3208
GsuI CTGGAG 4 cut(s) 1076, 1720, 2466, 2706
HaeIII GGCC 7 cut(s) 1103, 2129, 2399, 2416, 3093, 3362, 3379
HapII CCGG 3 cut(s) 378, 2126, 2150
HhaI GCGC 4 cut(s) 2134, 2638, 3204, 3209
Hin6I GCGC 4 cut(s) 2132, 2636, 3202, 3207
HinP1I GCGC 4 cut(s) 2132, 2636, 3202, 3207
HincII GTYRAC 3 cut(s) 1120, 2097, 2673
HindII GTYRAC 3 cut(s) 1120, 2097, 2673
HinfI GANTC 6 cut(s) 590, 1006, 1787, 2723, 2771, 2825
HpaI GTTAAC 2 cut(s) 1120, 2673
HpaII CCGG 3 cut(s) 378, 2126, 2150
Hpy166II GTNNAC 6 cut(s) 352, 1120, 1774, 1899, 2097, 2673
Hpy188I TCNGA 8 cut(s) 168, 200, 526, 1162, 1358, 1555, 2159, 2245
Hpy8I GTNNAC 6 cut(s) 352, 1120, 1774, 1899, 2097, 2673
Hpy99I CGWCG 2 cut(s) 2098, 2177
HpyCH4III ACNGT 7 cut(s) 130, 1064, 1892, 2016, 2440, 2710, 2908
HpyCH4IV ACGT 5 cut(s) 452, 493, 562, 1241, 1776
HpyF3I CTNAG 6 cut(s) 582, 875, 1105, 1145, 1638, 2565
HpySE526I ACGT 5 cut(s) 452, 493, 562, 1241, 1776
HspAI GCGC 4 cut(s) 2132, 2636, 3202, 3207
Ksp22I TGATCA 4 cut(s) 234, 1596, 2764, 2998
KspAI GTTAAC 2 cut(s) 1120, 2673
KspI CCGCGG 1 cut(s) 2062
LguI GCTCTTC 3 cut(s) 1380, 2294, 3257
LmnI GCTCC 4 cut(s) 748, 972, 2152, 2485
Lsp1109I GCAGC 7 cut(s) 680, 1899, 2941, 2942, 2944, 2971, 3216
MaeII ACGT 5 cut(s) 452, 493, 562, 1241, 1776
MaeIII GTNAC 7 cut(s) 616, 641, 1064, 1207, 1932, 2016, 2078
MbiI CCGCTC 1 cut(s) 181
MfeI CAATTG 4 cut(s) 395, 551, 1112, 1309
MflI RGATCY 2 cut(s) 1426, 1969
MhlI GDGCHC 2 cut(s) 493, 2482
MmeI TCCRAC 9 cut(s) 726, 1262, 1842, 1956, 2710, 2761, 2815, 2893, 2917
Mph1103I ATGCAT 2 cut(s) 429, 2514
MroXI GAANNNNTTC 1 cut(s) 2976
MslI CAYNNNNRTG 6 cut(s) 57, 432, 1358, 2631, 2796, 3125
MspA1I CMGCKG 2 cut(s) 2061, 2933
MspCI CTTAAG 1 cut(s) 911
MspI CCGG 3 cut(s) 378, 2126, 2150
MteI GCGCNGCGC 1 cut(s) 3205
MunI CAATTG 4 cut(s) 395, 551, 1112, 1309
Mva1269I GAATGC 1 cut(s) 429
MvaI CCWGG 9 cut(s) 81, 361, 771, 972, 1699, 2312, 2550, 2685, 3275
MvnI CGCG 3 cut(s) 2061, 2132, 2237
NciI CCSGG 1 cut(s) 2151
NdeI CATATG 1 cut(s) 1093
NheI GCTAGC 1 cut(s) 1573
NlaIV GGNNCC 4 cut(s) 2148, 2276, 2309, 3272
NmuCI GTSAC 4 cut(s) 616, 1207, 1932, 2078
NsiI ATGCAT 2 cut(s) 429, 2514
NspI RCATGY 2 cut(s) 2286, 3113
NspV TTCGAA 1 cut(s) 611
PagI TCATGA 6 cut(s) 1216, 1885, 2767, 2821, 3070, 3193
PasI CCCWGGG 1 cut(s) 971
PceI AGGCCT 2 cut(s) 2416, 3379
PciI ACATGT 1 cut(s) 3109
PciSI GCTCTTC 3 cut(s) 1380, 2294, 3257
PcsI WCGNNNNNNNCGW 2 cut(s) 2181, 2241
PctI GAATGC 1 cut(s) 429
PdmI GAANNNNTTC 1 cut(s) 2976
PfeI GAWTC 6 cut(s) 590, 1006, 1787, 2723, 2771, 2825
PflMI CCANNNNNTGG 1 cut(s) 2621
PfoI TCCNGGA 3 cut(s) 79, 1697, 2683
PpuMI RGGWCCY 2 cut(s) 77, 2275
PscI ACATGT 1 cut(s) 3109
PsiI TTATAA 1 cut(s) 1947
Psp124BI GAGCTC 1 cut(s) 2482
Psp5II RGGWCCY 2 cut(s) 77, 2275
Psp6I CCWGG 9 cut(s) 79, 359, 769, 970, 1697, 2310, 2548, 2683, 3273
PspGI CCWGG 9 cut(s) 79, 359, 769, 970, 1697, 2310, 2548, 2683, 3273
PspN4I GGNNCC 4 cut(s) 2148, 2276, 2309, 3272
PspPI GGNCC 8 cut(s) 77, 164, 1101, 2275, 2308, 2612, 3092, 3271
PspPPI RGGWCCY 2 cut(s) 77, 2275
PsuI RGATCY 2 cut(s) 1426, 1969
PvuII CAGCTG 1 cut(s) 2933
RsaI GTAC 8 cut(s) 37, 351, 1465, 1643, 2318, 2390, 3281, 3353
RsaNI GTAC 8 cut(s) 36, 350, 1464, 1642, 2317, 2389, 3280, 3352
RseI CAYNNNNRTG 6 cut(s) 57, 432, 1358, 2631, 2796, 3125
SacI GAGCTC 1 cut(s) 2482
SacII CCGCGG 1 cut(s) 2062
SalI GTCGAC 1 cut(s) 2095
SapI GCTCTTC 3 cut(s) 1380, 2294, 3257
Sau96I GGNCC 8 cut(s) 77, 164, 1101, 2275, 2308, 2612, 3092, 3271
ScaI AGTACT 4 cut(s) 1465, 1643, 2318, 3281
SduI GDGCHC 2 cut(s) 493, 2482
Sfr303I CCGCGG 1 cut(s) 2062
SfuI TTCGAA 1 cut(s) 611
SgrBI CCGCGG 1 cut(s) 2062
SinI GGWCC 6 cut(s) 77, 164, 2275, 2308, 2612, 3271
SmiMI CAYNNNNRTG 6 cut(s) 57, 432, 1358, 2631, 2796, 3125
SmlI CTYRAG 1 cut(s) 911
SmoI CTYRAG 1 cut(s) 911
SseBI AGGCCT 2 cut(s) 2416, 3379
SspI AATATT 1 cut(s) 1226
SstI GAGCTC 1 cut(s) 2482
StuI AGGCCT 2 cut(s) 2416, 3379
StyI CCWWGG 4 cut(s) 89, 208, 2142, 2270
TaaI ACNGT 7 cut(s) 130, 1064, 1892, 2016, 2440, 2710, 2908
TaiI ACGT 5 cut(s) 455, 496, 565, 1244, 1779
TaqI TCGA 9 cut(s) 124, 487, 611, 1086, 2096, 2250, 2291, 2629, 3254
TatI WGTACW 5 cut(s) 349, 1463, 1641, 2316, 3279
TauI GCSGC 9 cut(s) 184, 2052, 2055, 2058, 2061, 2132, 2217, 3020, 3093
TfiI GAWTC 6 cut(s) 590, 1006, 1787, 2723, 2771, 2825
TscAI CASTG 9 cut(s) 652, 665, 994, 1493, 2143, 2335, 2407, 3298, 3370
TseFI GTSAC 4 cut(s) 616, 1207, 1932, 2078
TseI GCWGC 7 cut(s) 668, 1912, 2930, 2954, 2957, 2984, 3204
Tsp45I GTSAC 4 cut(s) 616, 1207, 1932, 2078
TspGWI ACGGA 3 cut(s) 1884, 2549, 2764
TspRI CASTG 9 cut(s) 652, 665, 994, 1493, 2143, 2335, 2407, 3298, 3370
Van91I CCANNNNNTGG 1 cut(s) 2621
Vha464I CTTAAG 1 cut(s) 911
VpaK11BI GGWCC 6 cut(s) 77, 164, 2275, 2308, 2612, 3271
XagI CCTNNNNNAGG 2 cut(s) 1824, 2808
XapI RAATTY 7 cut(s) 304, 1288, 1322, 1414, 1482, 1556, 2228
XceI RCATGY 2 cut(s) 2286, 3113
XmaJI CCTAGG 1 cut(s) 89
XmiI GTMKAC 1 cut(s) 2096
XmnI GAANNNNTTC 1 cut(s) 2976
ZrmI AGTACT 4 cut(s) 1465, 1643, 2318, 3281
Zsp2I ATGCAT 2 cut(s) 429, 2514
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.