pycom07g05640

No apical meristem (NAM) protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0005817
Physical Location & Seq
Forward (+)
4928265 .. 4934029
5765 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g05640.1

Sequence Viewer

Length: 1965 bp
ATGGGTCGAGAAGCGGACCTTCAGATAATAGCATCAGCCGCCGCCGACGTCGCCGTAGCCGCCCCCTTAGTGCCGCCGACACTGCCACCGGCCCCGACTGCCCTCGCTCCCGGCTTCAGGTTCCACCCAACAGACGAGGAACTCGTCATTTACTACCTCAAGCGCAAGGTCTGTCGCAAACCCTTCAAATTTAACGCGATCTCCGAGGTCGACATCTACAAGAGTGAGCCCTGGGACCTCGCTGACAAGTCGAGCTTGAAGAGCAGGGACCAGGAGTACTACTTTTTCAGTGCATTGGATAGGAAGTACGGAAATGGGGCAAGGATGAATAGGGCTACCAACCAAGGGTACTGGAAGGCCACCGGAAATGACCGGGCCGTCAAGCACAACGATATTGTCGTGGGGATGAAGAAAACCTTGGTGTTCCATAGCGGCCGAGCTCCAGATGGGAAAAGGACCAATTGGGTTATGCATGAGTACAGACTTGTTGATGAAGTTTTTGAGAAGGCTGGGCTCGGCGCCATTCAGGATGCTTTTGTGCTATGTCGAGTATTTCACAAAAGCAATATAGGACCACCAAATGGGCATCGGTATGCGCCTTTTGTTGAGGAGGAGTGGGACGATGATGATAAGTTAACTTTGGTTCCTGGACAAGAGACCCGGAGTGTAGCTGTAGTTAGTCGTGATGCATTTGTGGTAGGAAATGGTCATGCTGCATGTAGTGAACAAAATGATTATGCTGATGGTAGTGAACAAAAGGTACATGCTGCTCGTAGTGAACAAAATGGACTTGCTGCATACATTAGAGGAAATGGACATGCTGCATATACTGGAGGAAATGGACATGCTGCACATACTGGAGGAAATGGGCATGCTGTATGTATTGGAGGAAATGGTCAAGCTGCATATAATGGAGAAAATGGTCGTGGAACTTCTGTTGAAGGAAATGGTCTTGGAACTTCCATGGAAGGAATTGCTCATGGAACTTCCGTTGAAGGAACTGGTCATGGAACTTCTGTCAAAGGGAGTGGTCGCAGCACTTCTGTCGAAGGAGGTGGTCGTGGCACTTCTATCGAACGTAATGGTCATGGCACTTCTGTCGAAGGAAGTGGTCATCACACTTCTGTCGAAGGAAGTGGTCATCACACTTCTGTCGAAGAAAATGGTCATGGCATTTCTGTCGAAGGAAATATTGTTGAAGGAATTGGTCATGGTGCTATAATTGTAGTAGATGACAATGGAACCATTAATGAAGGTGAATGTCATGAAACTTGTACTGCAGGAAATGGTCACAGTGTGCCCAGTGCAGAAAATAATATTGAGCAGGATACTCAGGCAATCAGTAAGGCTATTGTTGTTGTTCCTGAACTTCCAGCAGAGAATCAAACTGTTTTACCACCATGCAAGACGGAGAAAACTGACGATTATCCTATGACATGTGTGGTTAATAGAGAAGAGAGATTAGATGACTTTCCGTCACCAGGTCCAGATGATGCACAACCCCTGCTAACTTTGTTTAATCGACAACCTGGGCAACTACGCCAGTATAAAAGAAGGCGGCATAACGACTCAAATTCTAACCATTCAAATGCTTCTGAGATTTCAAGTGGGATGACACATGACCCTTGCTCGTCTACAACAACAACAGCGTCAACGGAGGCATCGATGACGACTACCAGAAATTTTCTGTCTGCACTGGTGGAGTATCAGCTGTTAGAATCCCTTGAACCCAAAGATACTACCCCAGCACCTCCTCCTGAACTCAATGCTGCTTTGATGGAATCTTCTGTGCCTACCAGCTGCTTGAAATACATAGAGACTTTGCAAACTGAGATCCACAAAATCTCAATTGAGAGGGAGACATTGAAGTTTGAAATGATGAGTGCCCAAGCCATGATCAACATTCTTCAAGCCCGAATTGATCTCCTAAACAAGGAGAACGAGGATTTGAAGAAGAAGGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0001067 GO:0002237 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006325 GO:0006351 GO:0006355 GO:0006396 GO:0006464 GO:0006482 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009642 GO:0009644 GO:0009648 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009962 GO:0009987 GO:0010033 GO:0010228 GO:0010267 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016569 GO:0016570 GO:0016577 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022414 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0034720 GO:0035194 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048229 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060966 GO:0060968 GO:0061458 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070918 GO:0070988 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1901698 GO:1901699 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1990837 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

655

Amino Acids

70.51

Weight (kDa)

5.57

Isoelectric Point (pI)

36.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 37 - 162 1.6e-46 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 377
AatII GACGTC 1 cut(s) 51
AccB1I GGYRCC 1 cut(s) 518
AccB7I CCANNNNNTGG 1 cut(s) 581
AccI GTMKAC 2 cut(s) 210, 1634
AccII CGCG 1 cut(s) 197
AciI CCGC 7 cut(s) 14, 39, 42, 60, 74, 432, 1558
AclWI GGATC 1 cut(s) 1828
AcoI YGGCCR 1 cut(s) 433
AcsI RAATTY 3 cut(s) 188, 1573, 1681
AcuI CTGAAG 2 cut(s) 5, 100
AcyI GRCGYC 2 cut(s) 48, 519
AdeI CACNNNGTG 1 cut(s) 1297
AfaI GTAC 6 cut(s) 278, 308, 350, 479, 762, 1276
AfiI CCNNNNNNNGG 5 cut(s) 117, 345, 581, 1481, 1933
AflIII ACRYGT 1 cut(s) 1436
AhdI GACNNNNNGTC 1 cut(s) 1474
AjnI CCWGG 5 cut(s) 230, 270, 646, 1480, 1528
AjuI GAANNNNNNNTTGG 2 cut(s) 401, 433
AluBI AGCT 6 cut(s) 255, 440, 671, 902, 1711, 1800
AluI AGCT 6 cut(s) 255, 440, 671, 902, 1711, 1800
Alw21I GWGCWC 1 cut(s) 442
Alw26I GTCTC 3 cut(s) 650, 1811, 1853
AlwI GGATC 1 cut(s) 1828
AoxI GGCC 4 cut(s) 90, 357, 375, 433
ApeKI GCWGC 9 cut(s) 713, 767, 794, 821, 848, 902, 1035, 1769, 1800
ApoI RAATTY 3 cut(s) 188, 1573, 1681
AseI ATTAAT 1 cut(s) 1248
AspLEI GCGC 3 cut(s) 165, 521, 598
AspS9I GGNCC 8 cut(s) 16, 91, 235, 268, 375, 456, 572, 1484
AsuC2I CCSGG 3 cut(s) 111, 374, 661
AsuHPI GGTGA 2 cut(s) 1268, 1470
AvaII GGWCC 6 cut(s) 16, 235, 268, 456, 572, 1484
BaeGI GKGCMC 2 cut(s) 1302, 1888
BanI GGYRCC 1 cut(s) 518
BanII GRGCYC 3 cut(s) 231, 442, 516
Bbv12I GWGCWC 1 cut(s) 442
BbvI GCAGC 9 cut(s) 700, 754, 781, 808, 835, 889, 1047, 1756, 1787
BccI CCATC 3 cut(s) 440, 737, 1771
BceAI ACGGC 2 cut(s) 38, 362
BcgI CGANNNNNNTGC 8 cut(s) 1027, 1054, 1061, 1081, 1088, 1115, 1162, 1196
BciT130I CCWGG 5 cut(s) 232, 272, 648, 1482, 1530
BciVI GTATCC 1 cut(s) 1321
BclI TGATCA 1 cut(s) 1896
BcnI CCSGG 3 cut(s) 111, 374, 661
BcoDI GTCTC 3 cut(s) 650, 1811, 1853
BfmI CTRYAG 2 cut(s) 672, 1278
BfoI RGCGCY 1 cut(s) 522
BfuI GTATCC 1 cut(s) 1321
BmcAI AGTACT 1 cut(s) 278
Bme1390I CCNGG 8 cut(s) 111, 232, 272, 374, 648, 661, 1482, 1530
Bme18I GGWCC 6 cut(s) 16, 235, 268, 456, 572, 1484
BmeRI GACNNNNNGTC 1 cut(s) 1474
BmgT120I GGNCC 8 cut(s) 16, 91, 235, 268, 375, 456, 572, 1484
BmiI GGNNCC 7 cut(s) 93, 122, 236, 269, 520, 645, 1243
BmrFI CCNGG 8 cut(s) 111, 232, 272, 374, 648, 661, 1482, 1530
BmrI ACTGGG 1 cut(s) 1296
BmsI GCATC 6 cut(s) 41, 520, 595, 676, 1483, 1670
BmuI ACTGGG 1 cut(s) 1296
BpmI CTGGAG 3 cut(s) 426, 852, 879
BpuEI CTTGAG 1 cut(s) 143
BpuMI CCSGG 3 cut(s) 111, 374, 661
Bsa29I ATCGAT 1 cut(s) 1664
BsaHI GRCGYC 2 cut(s) 48, 519
BsaI GGTCTC 1 cut(s) 650
BsaJI CCNNGG 7 cut(s) 204, 230, 231, 343, 417, 963, 1529
BsaWI WCCGGW 1 cut(s) 362
BsaXI ACNNNNNCTCC 2 cut(s) 185, 215
Bsc4I CCNNNNNNNGG 5 cut(s) 117, 345, 581, 1481, 1933
Bse118I RCCGGY 1 cut(s) 88
Bse1I ACTGG 7 cut(s) 356, 835, 862, 1006, 1302, 1543, 1701
BseBI CCWGG 5 cut(s) 232, 272, 648, 1482, 1530
BseCI ATCGAT 1 cut(s) 1664
BseDI CCNNGG 7 cut(s) 204, 230, 231, 343, 417, 963, 1529
BseGI GGATG 4 cut(s) 330, 411, 535, 1617
BseLI CCNNNNNNNGG 5 cut(s) 117, 345, 581, 1481, 1933
BseMII CTCAG 3 cut(s) 1346, 1587, 1821
BseNI ACTGG 7 cut(s) 356, 835, 862, 1006, 1302, 1543, 1701
BseRI GAGGAG 3 cut(s) 623, 626, 1743
BseSI GKGCMC 2 cut(s) 1302, 1888
BseX3I CGGCCG 1 cut(s) 433
BseXI GCAGC 9 cut(s) 700, 754, 781, 808, 835, 889, 1047, 1756, 1787
BseYI CCCAGC 2 cut(s) 509, 1744
BsgI GTGCAG 3 cut(s) 834, 1326, 1677
Bsh1236I CGCG 1 cut(s) 197
Bsh1285I CGRYCG 1 cut(s) 436
BshFI GGCC 4 cut(s) 92, 359, 377, 435
BshNI GGYRCC 1 cut(s) 518
BshVI ATCGAT 1 cut(s) 1664
BsiEI CGRYCG 1 cut(s) 436
BsiHKAI GWGCWC 1 cut(s) 442
BsiSI CCGG 5 cut(s) 89, 111, 363, 373, 661
BslFI GGGAC 3 cut(s) 248, 281, 632
BslI CCNNNNNNNGG 5 cut(s) 117, 345, 581, 1481, 1933
BsmAI GTCTC 3 cut(s) 650, 1811, 1853
BsmFI GGGAC 3 cut(s) 248, 281, 632
BsnI GGCC 4 cut(s) 92, 359, 377, 435
Bso31I GGTCTC 1 cut(s) 650
Bsp1286I GDGCHC 5 cut(s) 231, 442, 516, 1302, 1888
Bsp143I GATC 4 cut(s) 198, 1833, 1896, 1921
Bsp19I CCATGG 1 cut(s) 963
BspACI CCGC 7 cut(s) 14, 39, 42, 60, 74, 432, 1558
BspANI GGCC 4 cut(s) 92, 359, 377, 435
BspCNI CTCAG 3 cut(s) 1345, 1588, 1822
BspDI ATCGAT 1 cut(s) 1664
BspFNI CGCG 1 cut(s) 197
BspHI TCATGA 1 cut(s) 1264
BspLI GGNNCC 7 cut(s) 93, 122, 236, 269, 520, 645, 1243
BspMAI CTGCAG 1 cut(s) 1282
BspPI GGATC 1 cut(s) 1828
BspQI GCTCTTC 1 cut(s) 254
BspT107I GGYRCC 1 cut(s) 518
BspTNI GGTCTC 1 cut(s) 650
BsrFI RCCGGY 1 cut(s) 88
BsrI ACTGG 7 cut(s) 356, 835, 862, 1006, 1302, 1543, 1701
BssAI RCCGGY 1 cut(s) 88
BssECI CCNNGG 7 cut(s) 204, 230, 231, 343, 417, 963, 1529
BssMI GATC 4 cut(s) 198, 1833, 1896, 1921
BssNI GRCGYC 2 cut(s) 48, 519
BssT1I CCWWGG 3 cut(s) 343, 417, 963
Bst2UI CCWGG 5 cut(s) 232, 272, 648, 1482, 1530
Bst4CI ACNGT 2 cut(s) 1295, 1390
Bst6I CTCTTC 2 cut(s) 254, 1449
BstACI GRCGYC 2 cut(s) 48, 519
BstC8I GCNNGC 1 cut(s) 873
BstDEI CTNAG 4 cut(s) 67, 1332, 1596, 1830
BstDSI CCRYGG 1 cut(s) 963
BstENI CCTNNNNNAGG 1 cut(s) 1931
BstF5I GGATG 4 cut(s) 330, 411, 535, 1617
BstFNI CGCG 1 cut(s) 197
BstH2I RGCGCY 1 cut(s) 522
BstHHI GCGC 3 cut(s) 165, 521, 598
BstKTI GATC 4 cut(s) 201, 1836, 1899, 1924
BstMAI GTCTC 3 cut(s) 650, 1811, 1853
BstMBI GATC 4 cut(s) 198, 1833, 1896, 1921
BstMCI CGRYCG 1 cut(s) 436
BstMWI GCNNNNNNNGC 6 cut(s) 38, 50, 59, 82, 98, 261
BstNI CCWGG 5 cut(s) 232, 272, 648, 1482, 1530
BstNSI RCATGY 6 cut(s) 720, 767, 821, 848, 875, 1440
BstSCI CCNGG 8 cut(s) 109, 230, 270, 372, 646, 659, 1480, 1528
BstSFI CTRYAG 2 cut(s) 672, 1278
BstSLI GKGCMC 2 cut(s) 1302, 1888
BstUI CGCG 1 cut(s) 197
BstV1I GCAGC 9 cut(s) 700, 754, 781, 808, 835, 889, 1047, 1756, 1787
BstX2I RGATCY 1 cut(s) 1833
BstYI RGATCY 1 cut(s) 1833
BstZI CGGCCG 1 cut(s) 433
Bsu15I ATCGAT 1 cut(s) 1664
BsuI GTATCC 1 cut(s) 1321
BsuRI GGCC 4 cut(s) 92, 359, 377, 435
BsuTUI ATCGAT 1 cut(s) 1664
BtgI CCRYGG 1 cut(s) 963
BtsCI GGATG 4 cut(s) 330, 411, 535, 1617
BtsI GCAGTG 1 cut(s) 80
BtsIMutI CAGTG 5 cut(s) 80, 295, 1300, 1309, 1694
Cac8I GCNNGC 1 cut(s) 873
CciI TCATGA 1 cut(s) 1264
CfoI GCGC 3 cut(s) 165, 521, 598
Cfr10I RCCGGY 1 cut(s) 88
Cfr13I GGNCC 8 cut(s) 16, 91, 235, 268, 375, 456, 572, 1484
ClaI ATCGAT 1 cut(s) 1664
CseI GACGC 1 cut(s) 1638
CsiI ACCWGGT 1 cut(s) 1480
Csp6I GTAC 6 cut(s) 277, 307, 349, 478, 761, 1275
CspCI CAANNNNNGTGG 2 cut(s) 1009, 1044
CviQI GTAC 6 cut(s) 277, 307, 349, 478, 761, 1275
DdeI CTNAG 4 cut(s) 67, 1332, 1596, 1830
DinI GGCGCC 1 cut(s) 520
DpnI GATC 4 cut(s) 200, 1835, 1898, 1923
DpnII GATC 4 cut(s) 198, 1833, 1896, 1921
DraIII CACNNNGTG 1 cut(s) 1297
DrdI GACNNNNNNGTC 1 cut(s) 377
DriI GACNNNNNGTC 1 cut(s) 1474
DseDI GACNNNNNNGTC 1 cut(s) 377
EaeI YGGCCR 1 cut(s) 433
EagI CGGCCG 1 cut(s) 433
Eam1104I CTCTTC 2 cut(s) 254, 1449
Eam1105I GACNNNNNGTC 1 cut(s) 1474
EarI CTCTTC 2 cut(s) 254, 1449
Ecl136II GAGCTC 1 cut(s) 440
EclXI CGGCCG 1 cut(s) 433
Eco130I CCWWGG 3 cut(s) 343, 417, 963
Eco24I GRGCYC 3 cut(s) 231, 442, 516
Eco31I GGTCTC 1 cut(s) 650
Eco47I GGWCC 6 cut(s) 16, 235, 268, 456, 572, 1484
Eco52I CGGCCG 1 cut(s) 433
Eco53kI GAGCTC 1 cut(s) 440
Eco57I CTGAAG 2 cut(s) 5, 100
EcoICRI GAGCTC 1 cut(s) 440
EcoNI CCTNNNNNAGG 1 cut(s) 1931
EcoO109I RGGNCCY 1 cut(s) 235
EcoRII CCWGG 5 cut(s) 230, 270, 646, 1480, 1528
EcoT14I CCWWGG 3 cut(s) 343, 417, 963
EcoT22I ATGCAT 2 cut(s) 474, 691
EcoT38I GRGCYC 3 cut(s) 231, 442, 516
EgeI GGCGCC 1 cut(s) 520
EheI GGCGCC 1 cut(s) 520
ErhI CCWWGG 3 cut(s) 343, 417, 963
FalI AAGNNNNNCTT 5 cut(s) 35, 239, 271, 401, 433
FaqI GGGAC 3 cut(s) 248, 281, 632
FbaI TGATCA 1 cut(s) 1896
FblI GTMKAC 2 cut(s) 210, 1634
FokI GGATG 4 cut(s) 337, 418, 542, 1624
FriOI GRGCYC 3 cut(s) 231, 442, 516
GlaI GCGC 3 cut(s) 164, 520, 597
GsaI CCCAGC 2 cut(s) 513, 1748
GsuI CTGGAG 3 cut(s) 426, 852, 879
HaeII RGCGCY 1 cut(s) 522
HaeIII GGCC 4 cut(s) 92, 359, 377, 435
HapII CCGG 5 cut(s) 89, 111, 363, 373, 661
HgaI GACGC 1 cut(s) 1638
HhaI GCGC 3 cut(s) 165, 521, 598
Hin1I GRCGYC 2 cut(s) 48, 519
Hin6I GCGC 3 cut(s) 163, 519, 596
HinP1I GCGC 3 cut(s) 163, 519, 596
HincII GTYRAC 3 cut(s) 211, 636, 1653
HindII GTYRAC 3 cut(s) 211, 636, 1653
HinfI GANTC 4 cut(s) 1381, 1568, 1718, 1781
HpaI GTTAAC 1 cut(s) 636
HpaII CCGG 5 cut(s) 89, 111, 363, 373, 661
HphI GGTGA 2 cut(s) 1268, 1470
Hpy166II GTNNAC 7 cut(s) 211, 636, 725, 752, 779, 1635, 1653
Hpy188I TCNGA 4 cut(s) 24, 205, 1597, 1964
Hpy188III TCNNGA 8 cut(s) 8, 443, 527, 683, 1265, 1364, 1487, 1757
Hpy8I GTNNAC 7 cut(s) 211, 636, 725, 752, 779, 1635, 1653
Hpy99I CGWCG 2 cut(s) 50, 53
HpyCH4III ACNGT 2 cut(s) 1295, 1390
HpyCH4IV ACGT 2 cut(s) 48, 1078
HpyF10VI GCNNNNNNNGC 6 cut(s) 38, 50, 59, 82, 98, 261
HpyF3I CTNAG 4 cut(s) 67, 1332, 1596, 1830
HpySE526I ACGT 2 cut(s) 48, 1078
Hsp92I GRCGYC 2 cut(s) 48, 519
HspAI GCGC 3 cut(s) 163, 519, 596
KasI GGCGCC 1 cut(s) 518
Ksp22I TGATCA 1 cut(s) 1896
KspAI GTTAAC 1 cut(s) 636
Kzo9I GATC 4 cut(s) 198, 1833, 1896, 1921
LguI GCTCTTC 1 cut(s) 254
LmnI GCTCC 2 cut(s) 112, 445
Lsp1109I GCAGC 9 cut(s) 700, 754, 781, 808, 835, 889, 1047, 1756, 1787
LweI GCATC 6 cut(s) 41, 520, 595, 676, 1483, 1670
MabI ACCWGGT 1 cut(s) 1480
MaeII ACGT 2 cut(s) 48, 1078
MaeIII GTNAC 2 cut(s) 1289, 1476
MalI GATC 4 cut(s) 200, 1835, 1898, 1923
MboI GATC 4 cut(s) 198, 1833, 1896, 1921
MboII GAAGA 7 cut(s) 271, 421, 1169, 1466, 1776, 1898, 1963
MfeI CAATTG 2 cut(s) 460, 1848
MflI RGATCY 1 cut(s) 1833
MhlI GDGCHC 5 cut(s) 231, 442, 516, 1302, 1888
MluCI AATT 9 cut(s) 188, 460, 972, 1203, 1221, 1573, 1681, 1848, 1917
Mly113I GGCGCC 1 cut(s) 519
MlyI GAGTC 1 cut(s) 1562
Mph1103I ATGCAT 2 cut(s) 474, 691
MseI TTAA 5 cut(s) 192, 635, 1248, 1446, 1518
MslI CAYNNNNRTG 2 cut(s) 591, 1587
MspA1I CMGCKG 2 cut(s) 1711, 1800
MspI CCGG 5 cut(s) 89, 111, 363, 373, 661
MspR9I CCNGG 8 cut(s) 111, 232, 272, 374, 648, 661, 1482, 1530
MunI CAATTG 2 cut(s) 460, 1848
MvaI CCWGG 5 cut(s) 232, 272, 648, 1482, 1530
MvnI CGCG 1 cut(s) 197
MwoI GCNNNNNNNGC 6 cut(s) 38, 50, 59, 82, 98, 261
NarI GGCGCC 1 cut(s) 519
NciI CCSGG 3 cut(s) 111, 374, 661
NcoI CCATGG 1 cut(s) 963
NdeII GATC 4 cut(s) 198, 1833, 1896, 1921
NlaIV GGNNCC 7 cut(s) 93, 122, 236, 269, 520, 645, 1243
NmeAIII GCCGAG 2 cut(s) 461, 495
NmuCI GTSAC 2 cut(s) 1289, 1476
NsiI ATGCAT 2 cut(s) 474, 691
NspI RCATGY 6 cut(s) 720, 767, 821, 848, 875, 1440
PaeI GCATGC 1 cut(s) 875
PagI TCATGA 1 cut(s) 1264
PasI CCCWGGG 1 cut(s) 231
PciI ACATGT 1 cut(s) 1436
PciSI GCTCTTC 1 cut(s) 254
PcsI WCGNNNNNNNCGW 4 cut(s) 141, 201, 396, 1661
PfeI GAWTC 3 cut(s) 1381, 1718, 1781
PflMI CCANNNNNTGG 1 cut(s) 581
PfoI TCCNGGA 1 cut(s) 646
PleI GAGTC 1 cut(s) 1562
PluTI GGCGCC 1 cut(s) 522
PpsI GAGTC 1 cut(s) 1562
PpuMI RGGWCCY 1 cut(s) 235
PscI ACATGT 1 cut(s) 1436
PshBI ATTAAT 1 cut(s) 1248
Psp124BI GAGCTC 1 cut(s) 442
Psp5II RGGWCCY 1 cut(s) 235
Psp6I CCWGG 5 cut(s) 230, 270, 646, 1480, 1528
PspFI CCCAGC 2 cut(s) 509, 1744
PspGI CCWGG 5 cut(s) 230, 270, 646, 1480, 1528
PspN4I GGNNCC 7 cut(s) 93, 122, 236, 269, 520, 645, 1243
PspPI GGNCC 8 cut(s) 16, 91, 235, 268, 375, 456, 572, 1484
PspPPI RGGWCCY 1 cut(s) 235
PsrI GAACNNNNNNTAC 2 cut(s) 744, 776
PstI CTGCAG 1 cut(s) 1282
PsuI RGATCY 1 cut(s) 1833
PvuII CAGCTG 2 cut(s) 1711, 1800
RsaI GTAC 6 cut(s) 278, 308, 350, 479, 762, 1276
RsaNI GTAC 6 cut(s) 277, 307, 349, 478, 761, 1275
RseI CAYNNNNRTG 2 cut(s) 591, 1587
SacI GAGCTC 1 cut(s) 442
SalI GTCGAC 1 cut(s) 209
SapI GCTCTTC 1 cut(s) 254
SaqAI TTAA 5 cut(s) 192, 635, 1248, 1446, 1518
Sau3AI GATC 4 cut(s) 198, 1833, 1896, 1921
Sau96I GGNCC 8 cut(s) 16, 91, 235, 268, 375, 456, 572, 1484
ScaI AGTACT 1 cut(s) 278
SchI GAGTC 1 cut(s) 1562
ScrFI CCNGG 8 cut(s) 111, 232, 272, 374, 648, 661, 1482, 1530
SduI GDGCHC 5 cut(s) 231, 442, 516, 1302, 1888
SexAI ACCWGGT 1 cut(s) 1480
SfaNI GCATC 6 cut(s) 41, 520, 595, 676, 1483, 1670
SfcI CTRYAG 2 cut(s) 672, 1278
SfoI GGCGCC 1 cut(s) 520
SinI GGWCC 6 cut(s) 16, 235, 268, 456, 572, 1484
SmiMI CAYNNNNRTG 2 cut(s) 591, 1587
SmlI CTYRAG 1 cut(s) 158
SmoI CTYRAG 1 cut(s) 158
SphI GCATGC 1 cut(s) 875
Sse9I AATT 9 cut(s) 188, 460, 972, 1203, 1221, 1573, 1681, 1848, 1917
SsiI CCGC 7 cut(s) 14, 39, 42, 60, 74, 432, 1558
SspDI GGCGCC 1 cut(s) 518
SspI AATATT 2 cut(s) 1192, 1318
SstI GAGCTC 1 cut(s) 442
StyD4I CCNGG 8 cut(s) 109, 230, 270, 372, 646, 659, 1480, 1528
StyI CCWWGG 3 cut(s) 343, 417, 963
TaaI ACNGT 2 cut(s) 1295, 1390
TaiI ACGT 2 cut(s) 51, 1081
TasI AATT 9 cut(s) 188, 460, 972, 1203, 1221, 1573, 1681, 1848, 1917
TatI WGTACW 3 cut(s) 276, 477, 1274
TauI GCSGC 6 cut(s) 41, 44, 62, 76, 435, 1561
TfiI GAWTC 3 cut(s) 1381, 1718, 1781
Tru1I TTAA 5 cut(s) 192, 635, 1248, 1446, 1518
Tru9I TTAA 5 cut(s) 192, 635, 1248, 1446, 1518
TscAI CASTG 5 cut(s) 87, 295, 1300, 1309, 1701
TseFI GTSAC 2 cut(s) 1289, 1476
TseI GCWGC 9 cut(s) 713, 767, 794, 821, 848, 902, 1035, 1769, 1800
Tsp45I GTSAC 2 cut(s) 1289, 1476
TspDTI ATGAA 5 cut(s) 341, 422, 507, 1266, 1281
TspGWI ACGGA 5 cut(s) 324, 979, 1424, 1464, 1670
TspRI CASTG 5 cut(s) 87, 295, 1300, 1309, 1701
Van91I CCANNNNNTGG 1 cut(s) 581
VpaK11BI GGWCC 6 cut(s) 16, 235, 268, 456, 572, 1484
VspI ATTAAT 1 cut(s) 1248
XagI CCTNNNNNAGG 1 cut(s) 1931
XapI RAATTY 3 cut(s) 188, 1573, 1681
XceI RCATGY 6 cut(s) 720, 767, 821, 848, 875, 1440
XmiI GTMKAC 2 cut(s) 210, 1634
ZraI GACGTC 1 cut(s) 49
ZrmI AGTACT 1 cut(s) 278
Zsp2I ATGCAT 2 cut(s) 474, 691
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.