MD07G1122300.v1.1

MORC family CW-type zinc finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0002773
Physical Location & Seq
Forward (+)
15687887 .. 15696154
8268 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1122300.v1.1.491

Sequence Viewer

Length: 1950 bp
ATGCAATTGCAGCGGAATGACAAGCCTAAAGCTCGAATAGCGAAGCATAAAATATCGAAAAACCCGCATGGGATTCGAGAATCTGAAGAAAAAAGGAGCTCAAATGCTTTAAGTCCCGGTCATAGTAGCTCTAGTATATTAGACCAGGGGCAGTCTCCGGTGGATGATACCGGCGTCTCTTCTACATCAACTTTCAGTCCGGCACCGCTTTGCCGGCAGTTTTGGAAAGCTGGGAGCTATAATGACGCTGTTGGTTCTAAAGTCGCATTTCAAAATGGCAAAAACTATCTACATGTCCATCCTATGTTCCTTCATTCAAATGCCACTTCGCATAAATGGGCGTTTGGCGCCATTGCAGAACTACTTGACAATGCAGTTGATGAGATACAAAATGGGGCCACTTTTGTCATTGTAGATAAAATCTTGAATCCAAGGGATGGAAGTCCGGCATTGTTAATTCAAGATGATGGTAGTGGGATGGACCCTGAAGCCATGCGGCGTTGTATGAGTTTTGGGTTTTCAGATAAGAAGTCAAAATCAGCCATTGGACAATATGGAAATGGTTTCAAGACTAGTACCATGAGACTTGGCGCGGATGTTATTGTTTTCAGTCGCCACCAGGATACAAGGACATTGACTCAAAGCATTGGTCTCCTCTCTTATACATTCTTGGCACGAACAGGCCATGACAGAATAGTAGTACCGATGGTGGATTATGAATTCAACACATTAACTAATAAATTAGAAGTTATGCATGGGAAGGAACATTTTATGTCTAATCTTTCCATGCTGCTACAATGGTCCCCATATTCAACTGAGGCTGATCTTCTAAAGCAGTTTAATGACATTGGAGCTCATGGTACAAAAGTTATTGTCTATAATTTGTGGTTCAGTGATGATGGGAATCTGGAGCTAGACTTTGATACAGATCCTGAGGACATTCGCATTAGTGGGGATACCAAAAAAGTTGACACTAAATTTAAGACAGTAAATGAAGAGCACATTGCAAACCGTTTCCGTTTTTCTCTCCGTGTATACTTGTCCATCTTGTACTTGCGGATACCACAAACCTTTCAAATAGTACTTCGAGGGCGAGTTGTTGAGCATCATAACATTGCAAATGATCTAAAGTTTCCAGAATTTATCTTGTATAAACCTCAAAGTGGAGGTTCTGTGGAGGGTCAAGTTATTACGACAATTGGATTTCTTAAAGAAGCTCCACATGTCAGTTTCCATGGTTTCAATGTGTATCACAAAAATCGTCTAATACTGCCTTATTGGCAGGTTGTGAGCTATTCAGACAGTAGGGGTCGGGGGGTGGTTGGTGTTCTGGAAGCAAATTTTGTTGAGCCGAGTCACAACAAGCAAGATTTTGAGAAAACTAATCTTTTTCAGAAACTTGAAGTTCGCTTAAAGGAGATGACGTGGGAATACTGGGATTATCATTGTGGGTTAATTGGGTATCAGGTAAAGAAGAAACTTGCGTCACAGGTTTCATCTGGTCCTAAGATTACCCAACAGGTTTCATCTAATGGTGCGCCACCTAGTGGTGTTCAACATGTCAGATTGGGTCAAAGTTTCCCTGCTGTTGGTAGTAAAAAGGAGTCACTTGGAAGATCTGAACAAGTGGGAGGGATGAAGAGGAAGGAACATGGTGATATTCTATCGGTCAAAAATGTTAAAGTGGCCAAGGTGGTTAACGAGAAGAGTCAGAATGTACAGCTGGTGAGTCCTACTGGAGACCAGCGGAAAGATCAAGAAGCTGTAAATTTGATGCACGAGAACAAAAAGCTTCGAGCTGACTGCTTGGAATATGAGAAGAGGAATGAAGAACTTAATCTCAAGGCGACACAGCTTAGAAATGCAATAAAAGAGCTCGATGACGAATACTCTCGGATGATGGCTGAATTAGAAGCTTTGGAGGCTGTCAAGGAAGAACAGGGAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005911 GO:0006139 GO:0006259 GO:0006282 GO:0006304 GO:0006305 GO:0006306 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009506 GO:0009507 GO:0009526 GO:0009536 GO:0009889 GO:0009892 GO:0009941 GO:0009987 GO:0010468 GO:0010556 GO:0010605 GO:0010629 GO:0016070 GO:0016458 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0030054 GO:0031047 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0031935 GO:0031967 GO:0031975 GO:0032101 GO:0032103 GO:0032259 GO:0033043 GO:0033044 GO:0034641 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044728 GO:0046483 GO:0046983 GO:0048518 GO:0048519 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051052 GO:0051128 GO:0051171 GO:0051252 GO:0055044 GO:0060255 GO:0060968 GO:0065007 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0080188 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1902275 GO:1902288 GO:1902290 GO:1903506 GO:2000112 GO:2001020 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HATPase_c_3

Protein Analysis

650

Amino Acids

73.07

Weight (kDa)

8.51

Isoelectric Point (pI)

35.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HATPase_c_3 PF13589 115 - 214 6.6e-16 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c PF02518 117 - 195 2.1e-06 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Morc6_S5 PF17942 341 - 479 7.5e-62 Morc6 ribosomal protein S5 domain 2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1273
AccB1I GGYRCC 2 cut(s) 202, 347
AccB7I CCANNNNNTGG 2 cut(s) 437, 1547
AccI GTMKAC 1 cut(s) 1035
AccII CGCG 1 cut(s) 593
AciI CCGC 7 cut(s) 13, 65, 206, 496, 593, 1057, 1747
AclWI GGATC 1 cut(s) 923
AcoI YGGCCR 1 cut(s) 1686
AcsI RAATTY 5 cut(s) 719, 977, 1139, 1339, 1768
AcuI CTGAAG 2 cut(s) 105, 507
AcyI GRCGYC 2 cut(s) 174, 348
AdeI CACNNNGTG 1 cut(s) 1547
AfaI GTAC 6 cut(s) 577, 702, 862, 1052, 1083, 1719
AfiI CCNNNNNNNGG 4 cut(s) 437, 1163, 1547, 1589
AflIII ACRYGT 3 cut(s) 292, 1222, 1558
AhlI ACTAGT 1 cut(s) 572
AjiI CACGTC 1 cut(s) 1425
AjnI CCWGG 2 cut(s) 144, 618
Alw21I GWGCWC 4 cut(s) 101, 856, 1002, 1878
Alw26I GTCTC 5 cut(s) 159, 181, 577, 656, 1734
AlwI GGATC 1 cut(s) 923
AlwNI CAGNNNCTG 1 cut(s) 932
AoxI GGCC 3 cut(s) 396, 682, 1686
ApeKI GCWGC 2 cut(s) 10, 790
ApoI RAATTY 5 cut(s) 719, 977, 1139, 1339, 1768
ArsI GACNNNNNNTTYG 2 cut(s) 634, 666
AspLEI GCGC 3 cut(s) 350, 593, 1540
AspS9I GGNCC 4 cut(s) 396, 481, 801, 1502
AsuC2I CCSGG 1 cut(s) 117
AsuHPI GGTGA 2 cut(s) 1667, 1738
AvaII GGWCC 3 cut(s) 481, 801, 1502
AxyI CCTNAGG 1 cut(s) 933
BaeI ACNNNNGTAYC 4 cut(s) 159, 192, 852, 885
BalI TGGCCA 1 cut(s) 1688
BanI GGYRCC 2 cut(s) 202, 347
BanII GRGCYC 3 cut(s) 101, 856, 1878
BauI CACGAG 1 cut(s) 1778
Bbv12I GWGCWC 4 cut(s) 101, 856, 1002, 1878
BbvI GCAGC 2 cut(s) 22, 777
BccI CCATC 8 cut(s) 306, 431, 461, 472, 700, 893, 1052, 1894
BcgI CGANNNNNNTGC 4 cut(s) 56, 90, 1785, 1819
BciT130I CCWGG 2 cut(s) 146, 620
BciVI GTATCC 3 cut(s) 616, 949, 1053
BcnI CCSGG 1 cut(s) 117
BcoDI GTCTC 5 cut(s) 159, 181, 577, 656, 1734
BcuI ACTAGT 1 cut(s) 572
BfaI CTAG 4 cut(s) 132, 573, 914, 1545
BfoI RGCGCY 1 cut(s) 351
BfuAI ACCTGC 1 cut(s) 1273
BfuI GTATCC 3 cut(s) 616, 949, 1053
BglI GCCNNNNNGGC 1 cut(s) 1279
BglII AGATCT 1 cut(s) 1616
BisI GCNGC 3 cut(s) 11, 497, 791
BlsI GCNGC 3 cut(s) 12, 498, 792
BmcAI AGTACT 1 cut(s) 1083
Bme1390I CCNGG 3 cut(s) 117, 146, 620
Bme18I GGWCC 3 cut(s) 481, 801, 1502
BmgBI CACGTC 1 cut(s) 1425
BmgT120I GGNCC 4 cut(s) 396, 481, 801, 1502
BmiI GGNNCC 5 cut(s) 204, 349, 397, 483, 803
BmrFI CCNGG 3 cut(s) 117, 146, 620
BmrI ACTGGG 1 cut(s) 1444
BmsI GCATC 2 cut(s) 1114, 1764
BmuI ACTGGG 1 cut(s) 1444
BpmI CTGGAG 2 cut(s) 929, 1758
BpuEI CTTGAG 1 cut(s) 1826
BpuMI CCSGG 1 cut(s) 117
BsaBI GATNNNNATC 2 cut(s) 903, 927
BsaHI GRCGYC 2 cut(s) 174, 348
BsaI GGTCTC 2 cut(s) 656, 1734
BsaJI CCNNGG 4 cut(s) 145, 431, 1234, 1689
BsaWI WCCGGW 1 cut(s) 157
BsaXI ACNNNNNCTCC 4 cut(s) 1158, 1188, 1409, 1439
Bsc4I CCNNNNNNNGG 4 cut(s) 437, 1163, 1547, 1589
Bse118I RCCGGY 2 cut(s) 170, 213
Bse1I ACTGG 2 cut(s) 1439, 1741
Bse21I CCTNAGG 1 cut(s) 933
Bse3DI GCAATG 3 cut(s) 351, 1002, 1113
Bse8I GATNNNNATC 2 cut(s) 903, 927
BseBI CCWGG 2 cut(s) 146, 620
BseDI CCNNGG 4 cut(s) 145, 431, 1234, 1689
BseGI GGATG 7 cut(s) 169, 298, 442, 483, 601, 1641, 1902
BseJI GATNNNNATC 2 cut(s) 903, 927
BseLI CCNNNNNNNGG 4 cut(s) 437, 1163, 1547, 1589
BseMI GCAATG 3 cut(s) 351, 1002, 1113
BseMII CTCAG 2 cut(s) 807, 924
BseNI ACTGG 2 cut(s) 1439, 1741
BseRI GAGGAG 1 cut(s) 644
BseXI GCAGC 2 cut(s) 22, 777
BseYI CCCAGC 1 cut(s) 230
Bsh1236I CGCG 1 cut(s) 593
BshFI GGCC 3 cut(s) 398, 684, 1688
BshNI GGYRCC 2 cut(s) 202, 347
BsiHKAI GWGCWC 4 cut(s) 101, 856, 1002, 1878
BsiSI CCGG 6 cut(s) 117, 158, 171, 200, 214, 446
BslFI GGGAC 2 cut(s) 99, 787
BslI CCNNNNNNNGG 4 cut(s) 437, 1163, 1547, 1589
BsmAI GTCTC 5 cut(s) 159, 181, 577, 656, 1734
BsmBI CGTCTC 1 cut(s) 181
BsmFI GGGAC 2 cut(s) 99, 787
BsnI GGCC 3 cut(s) 398, 684, 1688
Bso31I GGTCTC 2 cut(s) 656, 1734
Bsp1286I GDGCHC 4 cut(s) 101, 856, 1002, 1878
Bsp1407I TGTACA 1 cut(s) 1717
Bsp143I GATC 5 cut(s) 823, 928, 1123, 1616, 1753
Bsp19I CCATGG 1 cut(s) 1234
BspACI CCGC 7 cut(s) 13, 65, 206, 496, 593, 1057, 1747
BspANI GGCC 3 cut(s) 398, 684, 1688
BspCNI CTCAG 2 cut(s) 808, 925
BspFNI CGCG 1 cut(s) 593
BspLI GGNNCC 5 cut(s) 204, 349, 397, 483, 803
BspMI ACCTGC 1 cut(s) 1273
BspPI GGATC 1 cut(s) 923
BspQI GCTCTTC 1 cut(s) 990
BspT107I GGYRCC 2 cut(s) 202, 347
BspTNI GGTCTC 2 cut(s) 656, 1734
BsrDI GCAATG 3 cut(s) 351, 1002, 1113
BsrFI RCCGGY 2 cut(s) 170, 213
BsrGI TGTACA 1 cut(s) 1717
BsrI ACTGG 2 cut(s) 1439, 1741
BssAI RCCGGY 2 cut(s) 170, 213
BssECI CCNNGG 4 cut(s) 145, 431, 1234, 1689
BssMI GATC 5 cut(s) 823, 928, 1123, 1616, 1753
BssNAI GTATAC 1 cut(s) 1036
BssNI GRCGYC 2 cut(s) 174, 348
BssSI CACGAG 1 cut(s) 1778
BssT1I CCWWGG 3 cut(s) 431, 1234, 1689
Bst1107I GTATAC 1 cut(s) 1036
Bst2BI CACGAG 1 cut(s) 1778
Bst2UI CCWGG 2 cut(s) 146, 620
Bst4CI ACNGT 3 cut(s) 988, 1013, 1304
Bst6I CTCTTC 5 cut(s) 184, 990, 1634, 1700, 1814
BstACI GRCGYC 2 cut(s) 174, 348
BstAUI TGTACA 1 cut(s) 1717
BstC8I GCNNGC 1 cut(s) 215
BstDEI CTNAG 4 cut(s) 816, 933, 1506, 1856
BstDSI CCRYGG 1 cut(s) 1234
BstF5I GGATG 7 cut(s) 169, 298, 442, 483, 601, 1641, 1902
BstFNI CGCG 1 cut(s) 593
BstH2I RGCGCY 1 cut(s) 351
BstHHI GCGC 3 cut(s) 350, 593, 1540
BstKTI GATC 5 cut(s) 826, 931, 1126, 1619, 1756
BstMAI GTCTC 5 cut(s) 159, 181, 577, 656, 1734
BstMBI GATC 5 cut(s) 823, 928, 1123, 1616, 1753
BstMWI GCNNNNNNNGC 6 cut(s) 10, 38, 214, 347, 1279, 1922
BstNI CCWGG 2 cut(s) 146, 620
BstNSI RCATGY 3 cut(s) 296, 1226, 1562
BstSCI CCNGG 3 cut(s) 115, 144, 618
BstUI CGCG 1 cut(s) 593
BstV1I GCAGC 2 cut(s) 22, 777
BstX2I RGATCY 2 cut(s) 928, 1616
BstYI RGATCY 2 cut(s) 928, 1616
BstZ17I GTATAC 1 cut(s) 1036
Bsu36I CCTNAGG 1 cut(s) 933
BsuI GTATCC 3 cut(s) 616, 949, 1053
BsuRI GGCC 3 cut(s) 398, 684, 1688
BtgI CCRYGG 1 cut(s) 1234
BtrI CACGTC 1 cut(s) 1425
BtsCI GGATG 7 cut(s) 169, 298, 442, 483, 601, 1641, 1902
BtsIMutI CAGTG 1 cut(s) 898
BveI ACCTGC 1 cut(s) 1273
Cac8I GCNNGC 1 cut(s) 215
CaiI CAGNNNCTG 1 cut(s) 932
CfoI GCGC 3 cut(s) 350, 593, 1540
Cfr10I RCCGGY 2 cut(s) 170, 213
Cfr13I GGNCC 4 cut(s) 396, 481, 801, 1502
CseI GACGC 3 cut(s) 163, 254, 1473
Csp6I GTAC 6 cut(s) 576, 701, 861, 1051, 1082, 1718
CviQI GTAC 6 cut(s) 576, 701, 861, 1051, 1082, 1718
DdeI CTNAG 4 cut(s) 816, 933, 1506, 1856
DinI GGCGCC 1 cut(s) 349
DpnI GATC 5 cut(s) 825, 930, 1125, 1618, 1755
DpnII GATC 5 cut(s) 823, 928, 1123, 1616, 1753
DraIII CACNNNGTG 1 cut(s) 1547
EaeI YGGCCR 1 cut(s) 1686
Eam1104I CTCTTC 5 cut(s) 184, 990, 1634, 1700, 1814
EarI CTCTTC 5 cut(s) 184, 990, 1634, 1700, 1814
Ecl136II GAGCTC 3 cut(s) 99, 854, 1876
Eco130I CCWWGG 3 cut(s) 431, 1234, 1689
Eco24I GRGCYC 3 cut(s) 101, 856, 1878
Eco31I GGTCTC 2 cut(s) 656, 1734
Eco47I GGWCC 3 cut(s) 481, 801, 1502
Eco53kI GAGCTC 3 cut(s) 99, 854, 1876
Eco57I CTGAAG 2 cut(s) 105, 507
Eco81I CCTNAGG 1 cut(s) 933
EcoICRI GAGCTC 3 cut(s) 99, 854, 1876
EcoRI GAATTC 1 cut(s) 719
EcoRII CCWGG 2 cut(s) 144, 618
EcoT14I CCWWGG 3 cut(s) 431, 1234, 1689
EcoT22I ATGCAT 1 cut(s) 756
EcoT38I GRGCYC 3 cut(s) 101, 856, 1878
EgeI GGCGCC 1 cut(s) 349
EheI GGCGCC 1 cut(s) 349
ErhI CCWWGG 3 cut(s) 431, 1234, 1689
Esp3I CGTCTC 1 cut(s) 181
FaqI GGGAC 2 cut(s) 99, 787
FauI CCCGC 1 cut(s) 72
FblI GTMKAC 1 cut(s) 1035
Fnu4HI GCNGC 3 cut(s) 11, 497, 791
FokI GGATG 7 cut(s) 176, 285, 449, 490, 608, 1648, 1909
FriOI GRGCYC 3 cut(s) 101, 856, 1878
Fsp4HI GCNGC 3 cut(s) 11, 497, 791
FspBI CTAG 4 cut(s) 132, 573, 914, 1545
GlaI GCGC 3 cut(s) 349, 592, 1539
GluI GCNGC 3 cut(s) 11, 497, 791
GsaI CCCAGC 1 cut(s) 234
GsuI CTGGAG 2 cut(s) 929, 1758
HaeII RGCGCY 1 cut(s) 351
HaeIII GGCC 3 cut(s) 398, 684, 1688
HapII CCGG 6 cut(s) 117, 158, 171, 200, 214, 446
HgaI GACGC 3 cut(s) 163, 254, 1473
HhaI GCGC 3 cut(s) 350, 593, 1540
Hin1I GRCGYC 2 cut(s) 174, 348
Hin6I GCGC 3 cut(s) 348, 591, 1538
HinP1I GCGC 3 cut(s) 348, 591, 1538
HincII GTYRAC 2 cut(s) 970, 1699
HindII GTYRAC 2 cut(s) 970, 1699
HindIII AAGCTT 2 cut(s) 1790, 1914
HinfI GANTC 9 cut(s) 73, 80, 427, 637, 904, 1354, 1604, 1708, 1729
HpaI GTTAAC 1 cut(s) 1699
HpaII CCGG 6 cut(s) 117, 158, 171, 200, 214, 446
HphI GGTGA 2 cut(s) 1667, 1738
Hpy166II GTNNAC 3 cut(s) 970, 1036, 1699
Hpy188I TCNGA 8 cut(s) 85, 523, 1300, 1395, 1565, 1621, 1713, 1896
Hpy188III TCNNGA 9 cut(s) 77, 424, 461, 568, 908, 932, 1136, 1331, 1757
Hpy8I GTNNAC 3 cut(s) 970, 1036, 1699
HpyAV CCTTC 3 cut(s) 320, 754, 1639
HpyCH4III ACNGT 3 cut(s) 988, 1013, 1304
HpyCH4IV ACGT 1 cut(s) 1424
HpyCH4V TGCA 9 cut(s) 4, 10, 356, 374, 754, 1007, 1118, 1777, 1865
HpyF10VI GCNNNNNNNGC 6 cut(s) 10, 38, 214, 347, 1279, 1922
HpyF3I CTNAG 4 cut(s) 816, 933, 1506, 1856
HpySE526I ACGT 1 cut(s) 1424
Hsp92I GRCGYC 2 cut(s) 174, 348
HspAI GCGC 3 cut(s) 348, 591, 1538
KasI GGCGCC 1 cut(s) 347
KroI GCCGGC 1 cut(s) 213
KroNI GCCGGC 1 cut(s) 215
KspAI GTTAAC 1 cut(s) 1699
Kzo9I GATC 5 cut(s) 823, 928, 1123, 1616, 1753
LguI GCTCTTC 1 cut(s) 990
LmnI GCTCC 5 cut(s) 96, 234, 851, 910, 1222
Lsp1109I GCAGC 2 cut(s) 22, 777
LweI GCATC 2 cut(s) 1114, 1764
MaeI CTAG 4 cut(s) 132, 573, 914, 1545
MaeII ACGT 1 cut(s) 1424
MaeIII GTNAC 3 cut(s) 1355, 1485, 1605
MalI GATC 5 cut(s) 825, 930, 1125, 1618, 1755
MboI GATC 5 cut(s) 823, 928, 1123, 1616, 1753
MfeI CAATTG 2 cut(s) 5, 1197
MflI RGATCY 2 cut(s) 928, 1616
MhlI GDGCHC 4 cut(s) 101, 856, 1002, 1878
MlsI TGGCCA 1 cut(s) 1688
MluNI TGGCCA 1 cut(s) 1688
Mly113I GGCGCC 1 cut(s) 348
MlyI GAGTC 5 cut(s) 631, 1363, 1613, 1717, 1738
Mox20I TGGCCA 1 cut(s) 1688
Mph1103I ATGCAT 1 cut(s) 756
MroNI GCCGGC 1 cut(s) 213
MscI TGGCCA 1 cut(s) 1688
MslI CAYNNNNRTG 1 cut(s) 318
Msp20I TGGCCA 1 cut(s) 1688
MspA1I CMGCKG 3 cut(s) 13, 1723, 1747
MspI CCGG 6 cut(s) 117, 158, 171, 200, 214, 446
MspR9I CCNGG 3 cut(s) 117, 146, 620
MunI CAATTG 2 cut(s) 5, 1197
MvaI CCWGG 2 cut(s) 146, 620
MvnI CGCG 1 cut(s) 593
MwoI GCNNNNNNNGC 6 cut(s) 10, 38, 214, 347, 1279, 1922
NaeI GCCGGC 1 cut(s) 215
NarI GGCGCC 1 cut(s) 348
NciI CCSGG 1 cut(s) 117
NcoI CCATGG 1 cut(s) 1234
NdeII GATC 5 cut(s) 823, 928, 1123, 1616, 1753
NgoMIV GCCGGC 1 cut(s) 213
NlaIV GGNNCC 5 cut(s) 204, 349, 397, 483, 803
NmeAIII GCCGAG 1 cut(s) 1377
NmuCI GTSAC 3 cut(s) 1355, 1485, 1605
NsiI ATGCAT 1 cut(s) 756
NspI RCATGY 3 cut(s) 296, 1226, 1562
PciI ACATGT 3 cut(s) 292, 1222, 1558
PciSI GCTCTTC 1 cut(s) 990
PdiI GCCGGC 1 cut(s) 215
PfeI GAWTC 4 cut(s) 73, 80, 427, 904
PflMI CCANNNNNTGG 2 cut(s) 437, 1547
PkrI GCNGC 3 cut(s) 12, 498, 792
PleI GAGTC 5 cut(s) 631, 1362, 1612, 1716, 1737
PluTI GGCGCC 1 cut(s) 351
PpsI GAGTC 5 cut(s) 631, 1362, 1612, 1716, 1737
PscI ACATGT 3 cut(s) 292, 1222, 1558
Psp124BI GAGCTC 3 cut(s) 101, 856, 1878
Psp6I CCWGG 2 cut(s) 144, 618
PspFI CCCAGC 1 cut(s) 230
PspGI CCWGG 2 cut(s) 144, 618
PspN4I GGNNCC 5 cut(s) 204, 349, 397, 483, 803
PspPI GGNCC 4 cut(s) 396, 481, 801, 1502
PstNI CAGNNNCTG 1 cut(s) 932
PsuI RGATCY 2 cut(s) 928, 1616
PvuII CAGCTG 1 cut(s) 1723
RsaI GTAC 6 cut(s) 577, 702, 862, 1052, 1083, 1719
RsaNI GTAC 6 cut(s) 576, 701, 861, 1051, 1082, 1718
RseI CAYNNNNRTG 1 cut(s) 318
SacI GAGCTC 3 cut(s) 101, 856, 1878
SapI GCTCTTC 1 cut(s) 990
SatI GCNGC 3 cut(s) 11, 497, 791
Sau3AI GATC 5 cut(s) 823, 928, 1123, 1616, 1753
Sau96I GGNCC 4 cut(s) 396, 481, 801, 1502
ScaI AGTACT 1 cut(s) 1083
SchI GAGTC 5 cut(s) 631, 1363, 1613, 1717, 1738
ScrFI CCNGG 3 cut(s) 117, 146, 620
SduI GDGCHC 4 cut(s) 101, 856, 1002, 1878
SfaNI GCATC 2 cut(s) 1114, 1764
SfoI GGCGCC 1 cut(s) 349
SinI GGWCC 3 cut(s) 481, 801, 1502
SmiMI CAYNNNNRTG 1 cut(s) 318
SmlI CTYRAG 1 cut(s) 1841
SmoI CTYRAG 1 cut(s) 1841
SpeI ACTAGT 1 cut(s) 572
SsiI CCGC 7 cut(s) 13, 65, 206, 496, 593, 1057, 1747
SspDI GGCGCC 1 cut(s) 347
SspMI CTAG 4 cut(s) 132, 573, 914, 1545
SstI GAGCTC 3 cut(s) 101, 856, 1878
StyD4I CCNGG 3 cut(s) 115, 144, 618
StyI CCWWGG 3 cut(s) 431, 1234, 1689
TaaI ACNGT 3 cut(s) 988, 1013, 1304
TaiI ACGT 1 cut(s) 1427
TaqI TCGA 6 cut(s) 34, 56, 76, 1087, 1795, 1878
TaqII GACCGA 1 cut(s) 1657
TatI WGTACW 3 cut(s) 1050, 1081, 1717
TauI GCSGC 1 cut(s) 499
TfiI GAWTC 4 cut(s) 73, 80, 427, 904
TscAI CASTG 1 cut(s) 898
TseFI GTSAC 3 cut(s) 1355, 1485, 1605
TseI GCWGC 2 cut(s) 10, 790
Tsp45I GTSAC 3 cut(s) 1355, 1485, 1605
TspDTI ATGAA 7 cut(s) 302, 732, 1008, 1485, 1515, 1652, 1842
TspGWI ACGGA 2 cut(s) 1007, 1019
TspRI CASTG 1 cut(s) 898
Van91I CCANNNNNTGG 2 cut(s) 437, 1547
VpaK11BI GGWCC 3 cut(s) 481, 801, 1502
XapI RAATTY 5 cut(s) 719, 977, 1139, 1339, 1768
XceI RCATGY 3 cut(s) 296, 1226, 1562
XmiI GTMKAC 1 cut(s) 1035
XspI CTAG 4 cut(s) 132, 573, 914, 1545
ZrmI AGTACT 1 cut(s) 1083
Zsp2I ATGCAT 1 cut(s) 756
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.