Rorug01G0212900

MORC family CW-type zinc finger protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
30353088 .. 30356878
3791 bp
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UTR
Exon/CDS
Intron
Rorug01G0212900.1

Sequence Viewer

Length: 1572 bp
ATGGCAGCAGAGGTGATACTATCAGTGTTGTTGGGTGGGTTTGTGATATGGGGGTTATATCTCTATGAGGTTTTGGTGCTACAGCCAAAGAGGCTAAGATCAAAGCTTGAAAAGCAAGGGATCAGAGGGCCTCCTCCTTCATCAATACTTCTGGGGAATATCCCAGAAATGAAGAAGATCAAAATCGAGGCGATGAAGAAGCCAGCAGCTACAACAACAGAAGCAAAGGATCACCCACTTTCTATTGCTCATGATTGGCCTTCAAATCTATTCCCTCATATTGCGCAGTGGCGAAAGGAATATGGGCCAATCTTCACCTATTCAACTGGAAGCATACAGCTATTAAGCGTTACAGAGATAGAGATGGTGAAGGAAATTAGCATGTGCACATCTTTGATTTTAGGAAGGCCTGCTTATATGTCTAAGGATTTGAAGCCCCTATTAGGACAAGGCATTATCTCTTCAAGTGGCCAAACTTGGTCACACCAGAGGAAAATCATTTCTCCTGAATTCTACTTTGATAAGGTTAAGGATATGGTCGATTTAATGGTGGACTCTACAGCGTCACTATTAAGATCTTGGGAAAGCAAAGTTGAAAGTGAGGGAGGAATGGCATTGTTTAGGATTGATCAAGATTTGAGAAGCTTGTCAGCAGATATAATATCAAGATCATCATTTGGAAGTAATTATTCAAAGGGGAAAGAAATCTTTTCAAAGCTCAGGACTCTTCAACAAGTTATGTCTCAGGGAAACCTTGGCATTCCCGGCTTAAGGCACTTGCCAACAAAGAGGAACAGAGAGATAAGGAGTCTAGAGAAAGAGATTCACTCAATGATACTGGAGGTTGCCAAAAAGCGCAATGAGGCTACTTATGAGAAGGATCTTCTTCAAATGATACTCGAGGGAGCAAAAAATTACTCTGATGCTGATAGCTTTTTTTCATCTGGTATGTCCGAGGACCAGTTCATAGTGGATAATTGCAAGAATATATATTTTGCTGGCCATGAGACCACTGCCATCACAGCATCATGGTGCTTGCTGTTGTTGGCCGCATATCCAGAGTGGCAAGCTCGTGTTCGTGCTGAGGTGCTTGAAATTTGCAAGGATGGCATTCCAAATGCTGATGTGCTTCGAGGCATGAAAACATTGACTATGGTGATTCAAGAAACACTGCGCTTGTACTCACCAGCAACTTTCATCTCAAGACATGCATTGGAAGATATTAAACTCAAAGACATTCTAATTCCCAAAGGAACCACCATTCAGATCCCAATCTCAATGGTGCAGCAATTGCCGGAATTATGGGGACCTGATGCTGCTGACTTTAATCCCAATAGATTCGAGGATGGAATTCGTGGGGCTTGCAAGTTTCCTCAGGCCTATTTCCCATTTGGATTTGGCGCTCGCATTTGTGTTGGCCAAAACTTAGCGATGACAGAATTGAAGGTGATTCTGTCTCTCATATTATCCAAGTTATCATTCTCGCTCGACCCTGCATACCAACACAGCCCGGTTTTTAGGTTGGTTATTGAACCTGAACATGGAGTAAGTCTCCATGTGAGGAGGGTGTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

523

Amino Acids

58.79

Weight (kDa)

8.66

Isoelectric Point (pI)

50.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 90 - 507 2.4e-79 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 285
AciI CCGC 1 cut(s) 1050
AclWI GGATC 4 cut(s) 128, 237, 888, 1261
AcoI YGGCCR 4 cut(s) 469, 1000, 1047, 1417
AcsI RAATTY 3 cut(s) 509, 1095, 1350
AfaI GTAC 1 cut(s) 1181
AfiI CCNNNNNNNGG 3 cut(s) 443, 771, 1541
AflII CTTAAG 1 cut(s) 769
AjuI GAANNNNNNNTTGG 2 cut(s) 1463, 1495
AluBI AGCT 7 cut(s) 106, 209, 340, 645, 718, 933, 1070
AluI AGCT 7 cut(s) 106, 209, 340, 645, 718, 933, 1070
Alw21I GWGCWC 1 cut(s) 389
Alw26I GTCTC 4 cut(s) 747, 1001, 1461, 1556
Alw44I GTGCAC 1 cut(s) 385
AlwI GGATC 4 cut(s) 128, 237, 888, 1261
Ama87I CYCGRG 1 cut(s) 899
AoxI GGCC 9 cut(s) 128, 257, 305, 407, 469, 1000, 1047, 1377, 1417
ApaLI GTGCAC 1 cut(s) 385
ApeKI GCWGC 4 cut(s) 5, 206, 1285, 1316
ApoI RAATTY 3 cut(s) 509, 1095, 1350
AspLEI GCGC 4 cut(s) 286, 858, 1176, 1403
AspS9I GGNCC 4 cut(s) 128, 305, 958, 1307
AsuC2I CCSGG 2 cut(s) 765, 1511
AsuHPI GGTGA 7 cut(s) 25, 224, 307, 379, 1168, 1176, 1459
AvaI CYCGRG 1 cut(s) 899
AvaII GGWCC 2 cut(s) 958, 1307
AxyI CCTNAGG 1 cut(s) 1374
BaeGI GKGCMC 1 cut(s) 389
BalI TGGCCA 3 cut(s) 471, 1002, 1419
BauI CACGAG 1 cut(s) 1071
Bbv12I GWGCWC 1 cut(s) 389
BbvCI CCTCAGC 1 cut(s) 1083
BbvI GCAGC 4 cut(s) 17, 218, 1297, 1303
BccI CCATC 4 cut(s) 358, 1025, 1100, 1340
BclI TGATCA 1 cut(s) 628
BcnI CCSGG 2 cut(s) 765, 1511
BcoDI GTCTC 4 cut(s) 747, 1001, 1461, 1556
BfaI CTAG 1 cut(s) 812
BfmI CTRYAG 2 cut(s) 80, 558
BfoI RGCGCY 1 cut(s) 1404
BfrI CTTAAG 1 cut(s) 769
BglI GCCNNNNNGGC 1 cut(s) 91
BglII AGATCT 1 cut(s) 575
BisI GCNGC 5 cut(s) 6, 207, 1050, 1286, 1317
BlsI GCNGC 5 cut(s) 7, 208, 1051, 1287, 1318
Bme1390I CCNGG 2 cut(s) 765, 1511
Bme18I GGWCC 2 cut(s) 958, 1307
BmeT110I CYCGRG 1 cut(s) 899
BmgT120I GGNCC 4 cut(s) 128, 305, 958, 1307
BmiI GGNNCC 2 cut(s) 1255, 1308
BmrFI CCNGG 2 cut(s) 765, 1511
BmsI GCATC 3 cut(s) 913, 1034, 1303
BplI GAGNNNNNCTC 4 cut(s) 812, 844, 1536, 1568
BpmI CTGGAG 1 cut(s) 860
Bpu10I CCTNAGC 2 cut(s) 719, 1083
BpuEI CTTGAG 1 cut(s) 1186
BpuMI CCSGG 2 cut(s) 765, 1511
BsaBI GATNNNNATC 2 cut(s) 182, 1271
BsaI GGTCTC 1 cut(s) 1001
BsaJI CCNNGG 2 cut(s) 754, 954
Bsc4I CCNNNNNNNGG 3 cut(s) 443, 771, 1541
Bse1I ACTGG 3 cut(s) 331, 843, 961
Bse21I CCTNAGG 1 cut(s) 1374
Bse3DI GCAATG 1 cut(s) 865
Bse8I GATNNNNATC 2 cut(s) 182, 1271
BseDI CCNNGG 2 cut(s) 754, 954
BseGI GGATG 2 cut(s) 1111, 1351
BseJI GATNNNNATC 2 cut(s) 182, 1271
BseLI CCNNNNNNNGG 3 cut(s) 443, 771, 1541
BseMI GCAATG 1 cut(s) 865
BseMII CTCAG 4 cut(s) 733, 758, 1074, 1388
BseNI ACTGG 3 cut(s) 331, 843, 961
BseRI GAGGAG 1 cut(s) 123
BseSI GKGCMC 1 cut(s) 389
BseXI GCAGC 4 cut(s) 17, 218, 1297, 1303
BsgI GTGCAG 1 cut(s) 1304
BshFI GGCC 9 cut(s) 130, 259, 307, 409, 471, 1002, 1049, 1379, 1419
BsiHKAI GWGCWC 1 cut(s) 389
BsiHKCI CYCGRG 1 cut(s) 899
BsiSI CCGG 3 cut(s) 765, 1295, 1511
BslFI GGGAC 1 cut(s) 1320
BslI CCNNNNNNNGG 3 cut(s) 443, 771, 1541
BsmAI GTCTC 4 cut(s) 747, 1001, 1461, 1556
BsmFI GGGAC 1 cut(s) 1320
BsmI GAATGC 2 cut(s) 759, 1110
BsnI GGCC 9 cut(s) 130, 259, 307, 409, 471, 1002, 1049, 1379, 1419
Bso31I GGTCTC 1 cut(s) 1001
BsoBI CYCGRG 1 cut(s) 899
Bsp1286I GDGCHC 1 cut(s) 389
Bsp143I GATC 9 cut(s) 98, 120, 177, 229, 575, 628, 668, 880, 1266
BspACI CCGC 1 cut(s) 1050
BspANI GGCC 9 cut(s) 130, 259, 307, 409, 471, 1002, 1049, 1379, 1419
BspCNI CTCAG 4 cut(s) 732, 757, 1075, 1387
BspHI TCATGA 1 cut(s) 250
BspLI GGNNCC 2 cut(s) 1255, 1308
BspPI GGATC 4 cut(s) 128, 237, 888, 1261
BspTI CTTAAG 1 cut(s) 769
BspTNI GGTCTC 1 cut(s) 1001
BsrDI GCAATG 1 cut(s) 865
BsrI ACTGG 3 cut(s) 331, 843, 961
BssECI CCNNGG 2 cut(s) 754, 954
BssMI GATC 9 cut(s) 98, 120, 177, 229, 575, 628, 668, 880, 1266
BssSI CACGAG 1 cut(s) 1071
BssT1I CCWWGG 1 cut(s) 754
Bst2BI CACGAG 1 cut(s) 1071
Bst6I CTCTTC 2 cut(s) 466, 732
BstAFI CTTAAG 1 cut(s) 769
BstAPI GCANNNNNTGC 1 cut(s) 1291
BstC8I GCNNGC 7 cut(s) 204, 411, 1000, 1037, 1068, 1363, 1405
BstDEI CTNAG 7 cut(s) 95, 423, 719, 744, 1083, 1374, 1426
BstF5I GGATG 2 cut(s) 1111, 1351
BstH2I RGCGCY 1 cut(s) 1404
BstHHI GCGC 4 cut(s) 286, 858, 1176, 1403
BstKTI GATC 9 cut(s) 101, 123, 180, 232, 578, 631, 671, 883, 1269
BstMAI GTCTC 4 cut(s) 747, 1001, 1461, 1556
BstMBI GATC 9 cut(s) 98, 120, 177, 229, 575, 628, 668, 880, 1266
BstMWI GCNNNNNNNGC 6 cut(s) 91, 112, 765, 1022, 1107, 1291
BstNSI RCATGY 2 cut(s) 385, 1211
BstSCI CCNGG 2 cut(s) 763, 1509
BstSFI CTRYAG 2 cut(s) 80, 558
BstSLI GKGCMC 1 cut(s) 389
BstV1I GCAGC 4 cut(s) 17, 218, 1297, 1303
BstX2I RGATCY 3 cut(s) 575, 880, 1266
BstYI RGATCY 3 cut(s) 575, 880, 1266
Bsu36I CCTNAGG 1 cut(s) 1374
BsuRI GGCC 9 cut(s) 130, 259, 307, 409, 471, 1002, 1049, 1379, 1419
BtgZI GCGATG 2 cut(s) 206, 1445
BtsCI GGATG 2 cut(s) 1111, 1351
BtsI GCAGTG 3 cut(s) 293, 1011, 1169
BtsIMutI CAGTG 4 cut(s) 30, 293, 1011, 1169
Cac8I GCNNGC 7 cut(s) 204, 411, 1000, 1037, 1068, 1363, 1405
CciI TCATGA 1 cut(s) 250
CfoI GCGC 4 cut(s) 286, 858, 1176, 1403
Cfr13I GGNCC 4 cut(s) 128, 305, 958, 1307
CseI GACGC 1 cut(s) 552
Csp6I GTAC 1 cut(s) 1180
CviAII CATG 8 cut(s) 251, 382, 1004, 1029, 1138, 1208, 1541, 1556
CviQI GTAC 1 cut(s) 1180
DdeI CTNAG 7 cut(s) 95, 423, 719, 744, 1083, 1374, 1426
DpnI GATC 9 cut(s) 100, 122, 179, 231, 577, 630, 670, 882, 1268
DpnII GATC 9 cut(s) 98, 120, 177, 229, 575, 628, 668, 880, 1266
EaeI YGGCCR 4 cut(s) 469, 1000, 1047, 1417
Eam1104I CTCTTC 2 cut(s) 466, 732
EarI CTCTTC 2 cut(s) 466, 732
Eco130I CCWWGG 1 cut(s) 754
Eco147I AGGCCT 2 cut(s) 409, 1379
Eco31I GGTCTC 1 cut(s) 1001
Eco47I GGWCC 2 cut(s) 958, 1307
Eco81I CCTNAGG 1 cut(s) 1374
Eco88I CYCGRG 1 cut(s) 899
EcoO109I RGGNCCY 2 cut(s) 128, 1307
EcoRI GAATTC 2 cut(s) 509, 1350
EcoT14I CCWWGG 1 cut(s) 754
EcoT22I ATGCAT 1 cut(s) 1213
ErhI CCWWGG 1 cut(s) 754
FaeI CATG 8 cut(s) 254, 385, 1007, 1032, 1141, 1211, 1544, 1559
FalI AAGNNNNNCTT 2 cut(s) 397, 429
FaqI GGGAC 1 cut(s) 1320
FatI CATG 8 cut(s) 250, 381, 1003, 1028, 1137, 1207, 1540, 1555
FbaI TGATCA 1 cut(s) 628
Fnu4HI GCNGC 5 cut(s) 6, 207, 1050, 1286, 1317
FokI GGATG 2 cut(s) 1118, 1358
Fsp4HI GCNGC 5 cut(s) 6, 207, 1050, 1286, 1317
FspBI CTAG 1 cut(s) 812
FspI TGCGCA 1 cut(s) 285
GlaI GCGC 4 cut(s) 285, 857, 1175, 1402
GluI GCNGC 5 cut(s) 6, 207, 1050, 1286, 1317
GsuI CTGGAG 1 cut(s) 860
HaeII RGCGCY 1 cut(s) 1404
HaeIII GGCC 9 cut(s) 130, 259, 307, 409, 471, 1002, 1049, 1379, 1419
HapII CCGG 3 cut(s) 765, 1295, 1511
HgaI GACGC 1 cut(s) 552
HhaI GCGC 4 cut(s) 286, 858, 1176, 1403
Hin1II CATG 8 cut(s) 254, 385, 1007, 1032, 1141, 1211, 1544, 1559
Hin6I GCGC 4 cut(s) 284, 856, 1174, 1401
HinP1I GCGC 4 cut(s) 284, 856, 1174, 1401
HindIII AAGCTT 2 cut(s) 104, 643
HinfI GANTC 7 cut(s) 554, 724, 808, 823, 1159, 1338, 1450
HpaII CCGG 3 cut(s) 765, 1295, 1511
HphI GGTGA 7 cut(s) 25, 224, 307, 379, 1168, 1176, 1459
Hpy166II GTNNAC 2 cut(s) 387, 553
Hpy188I TCNGA 4 cut(s) 125, 922, 955, 1266
Hpy188III TCNNGA 9 cut(s) 251, 506, 632, 666, 721, 812, 1058, 1163, 1203
Hpy8I GTNNAC 2 cut(s) 387, 553
HpyAV CCTTC 6 cut(s) 147, 270, 364, 399, 871, 1438
HpyCH4V TGCA 7 cut(s) 387, 981, 1101, 1211, 1285, 1365, 1496
HpyF10VI GCNNNNNNNGC 6 cut(s) 91, 112, 765, 1022, 1107, 1291
HpyF3I CTNAG 7 cut(s) 95, 423, 719, 744, 1083, 1374, 1426
Hsp92II CATG 8 cut(s) 254, 385, 1007, 1032, 1141, 1211, 1544, 1559
HspAI GCGC 4 cut(s) 284, 856, 1174, 1401
Ksp22I TGATCA 1 cut(s) 628
Kzo9I GATC 9 cut(s) 98, 120, 177, 229, 575, 628, 668, 880, 1266
LmnI GCTCC 1 cut(s) 905
Lsp1109I GCAGC 4 cut(s) 17, 218, 1297, 1303
LweI GCATC 3 cut(s) 913, 1034, 1303
MaeI CTAG 1 cut(s) 812
MaeIII GTNAC 3 cut(s) 349, 480, 564
MalI GATC 9 cut(s) 100, 122, 179, 231, 577, 630, 670, 882, 1268
MboI GATC 9 cut(s) 98, 120, 177, 229, 575, 628, 668, 880, 1266
MboII GAAGA 9 cut(s) 184, 187, 208, 304, 453, 719, 875, 878, 1229
MfeI CAATTG 1 cut(s) 1289
MflI RGATCY 3 cut(s) 575, 880, 1266
MhlI GDGCHC 1 cut(s) 389
MlsI TGGCCA 3 cut(s) 471, 1002, 1419
MluNI TGGCCA 3 cut(s) 471, 1002, 1419
MlyI GAGTC 3 cut(s) 548, 718, 817
Mox20I TGGCCA 3 cut(s) 471, 1002, 1419
Mph1103I ATGCAT 1 cut(s) 1213
MscI TGGCCA 3 cut(s) 471, 1002, 1419
MseI TTAA 7 cut(s) 344, 528, 545, 572, 770, 1224, 1326
MslI CAYNNNNRTG 1 cut(s) 1030
Msp20I TGGCCA 3 cut(s) 471, 1002, 1419
MspCI CTTAAG 1 cut(s) 769
MspI CCGG 3 cut(s) 765, 1295, 1511
MspR9I CCNGG 2 cut(s) 765, 1511
MunI CAATTG 1 cut(s) 1289
Mva1269I GAATGC 2 cut(s) 759, 1110
MwoI GCNNNNNNNGC 6 cut(s) 91, 112, 765, 1022, 1107, 1291
NciI CCSGG 2 cut(s) 765, 1511
NdeII GATC 9 cut(s) 98, 120, 177, 229, 575, 628, 668, 880, 1266
NlaIII CATG 8 cut(s) 254, 385, 1007, 1032, 1141, 1211, 1544, 1559
NlaIV GGNNCC 2 cut(s) 1255, 1308
NmuCI GTSAC 2 cut(s) 480, 564
NsbI TGCGCA 1 cut(s) 285
NsiI ATGCAT 1 cut(s) 1213
NspI RCATGY 2 cut(s) 385, 1211
PaeR7I CTCGAG 1 cut(s) 899
PagI TCATGA 1 cut(s) 250
PceI AGGCCT 2 cut(s) 409, 1379
PctI GAATGC 2 cut(s) 759, 1110
PfeI GAWTC 4 cut(s) 823, 1159, 1338, 1450
PkrI GCNGC 5 cut(s) 7, 208, 1051, 1287, 1318
PleI GAGTC 3 cut(s) 548, 718, 816
PpsI GAGTC 3 cut(s) 548, 718, 816
PpuMI RGGWCCY 1 cut(s) 1307
Psp5II RGGWCCY 1 cut(s) 1307
PspN4I GGNNCC 2 cut(s) 1255, 1308
PspPI GGNCC 4 cut(s) 128, 305, 958, 1307
PspPPI RGGWCCY 1 cut(s) 1307
PspXI VCTCGAGB 1 cut(s) 899
PsuI RGATCY 3 cut(s) 575, 880, 1266
RsaI GTAC 1 cut(s) 1181
RsaNI GTAC 1 cut(s) 1180
RseI CAYNNNNRTG 1 cut(s) 1030
SaqAI TTAA 7 cut(s) 344, 528, 545, 572, 770, 1224, 1326
SatI GCNGC 5 cut(s) 6, 207, 1050, 1286, 1317
Sau3AI GATC 9 cut(s) 98, 120, 177, 229, 575, 628, 668, 880, 1266
Sau96I GGNCC 4 cut(s) 128, 305, 958, 1307
SchI GAGTC 3 cut(s) 548, 718, 817
ScrFI CCNGG 2 cut(s) 765, 1511
SduI GDGCHC 1 cut(s) 389
SfaNI GCATC 3 cut(s) 913, 1034, 1303
SfcI CTRYAG 2 cut(s) 80, 558
Sfr274I CTCGAG 1 cut(s) 899
SinI GGWCC 2 cut(s) 958, 1307
SlaI CTCGAG 1 cut(s) 899
SmiMI CAYNNNNRTG 1 cut(s) 1030
SmlI CTYRAG 3 cut(s) 769, 899, 1201
SmoI CTYRAG 3 cut(s) 769, 899, 1201
SseBI AGGCCT 2 cut(s) 409, 1379
SsiI CCGC 1 cut(s) 1050
SspMI CTAG 1 cut(s) 812
StuI AGGCCT 2 cut(s) 409, 1379
StyD4I CCNGG 2 cut(s) 763, 1509
StyI CCWWGG 1 cut(s) 754
TaqI TCGA 6 cut(s) 186, 540, 900, 1132, 1341, 1488
TatI WGTACW 1 cut(s) 1179
TauI GCSGC 1 cut(s) 1052
TfiI GAWTC 4 cut(s) 823, 1159, 1338, 1450
Tru1I TTAA 7 cut(s) 344, 528, 545, 572, 770, 1224, 1326
Tru9I TTAA 7 cut(s) 344, 528, 545, 572, 770, 1224, 1326
TscAI CASTG 4 cut(s) 30, 293, 1018, 1176
TseFI GTSAC 2 cut(s) 480, 564
TseI GCWGC 4 cut(s) 5, 206, 1285, 1316
Tsp45I GTSAC 2 cut(s) 480, 564
TspDTI ATGAA 7 cut(s) 129, 185, 209, 930, 955, 1154, 1186
TspRI CASTG 4 cut(s) 30, 293, 1018, 1176
Vha464I CTTAAG 1 cut(s) 769
VneI GTGCAC 1 cut(s) 385
VpaK11BI GGWCC 2 cut(s) 958, 1307
XapI RAATTY 3 cut(s) 509, 1095, 1350
XbaI TCTAGA 1 cut(s) 811
XceI RCATGY 2 cut(s) 385, 1211
XhoI CTCGAG 1 cut(s) 899
XspI CTAG 1 cut(s) 812
Zsp2I ATGCAT 1 cut(s) 1213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.