Rroxscaffold_4G00304660

MORC family CW-type zinc finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0002773
Physical Location & Seq
Reverse (-)
25308332 .. 25316459
8128 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00304660.1

Sequence Viewer

Length: 1926 bp
ATGAGGAAGCTCCGGTGGCAACTGCGTTTGCATCTTTTTTGTCGCCTAGCAACCGCGTCCTTTAATCTGGACCGTTGGTTTCAATTAATGTTGAGATCCGACGGTCATGGAATTAATATGCATATATTGGGTTGTAACGCCATAGCAGAACTCCTTGACAATGCAGTTGATGAGATCCAAAATGGGGCCACTTTTGTCAATGTAGATAAAATCTCAAATCCAAAGGATGGAAGCCCGGCATTGTTAATTCAAGATGATGGTAACGGCATGGACCCTGAAGCTATGCGCCGCTGTATGAGTTTTGGGTTTTCAGATAAGAAGTCGAAATCAGCCATTGGCCAATATGGTAATGGCTTCAAGACCAGTACTATGAGACTTGGTGCGGATGTTATTGTATTCAGCCGCCACCAGGATAAGAGTGGGTTTGCAATAGTTGCTAGATTCACCCGGGTGTTGTCTCTTACTGTGTTATGTGATTCCCTATTTATGGAGAGGCCTTCTGCCTCTGTCATCTGGAGGTGGAAGAGCAAAGGAATGTGGGAGTTATGCGGTAGCAATGTCTTCAGTTCTGTTTGTTCAGTTGATCTTTTATTTACCTTTCGCAGCTTACATTTATTAGTGTTTCTGTTAAAGCAGACTGCTGGTTCCCTTAGTGTGGTGGATTACGAATTCAACCCTACAACTGAGACATTAGATATAATGCACGGCAGAGAACATTTTATGTCTAATCTCTCCTTGTTGCTACAGTGGTCTCCATATTCAACAGTGGCTGAGCTACTGAAACAATTTAATGACATTGGAGCTCATGGGACAAAAGTTATGATTTATAACTTATGGTTCAACGATGATGGGAGTGCAGAGCTGGACTTCGATACTGATCCCAAGGATATTCGTATTAGTGAGGATACCAAAAAAGTTAATGCCAGACTTGGATGGAAAGAAGTCAATGAACAGCACATTGCTAATCGTTTCCATCACTCTCTCCATGTTTACTTGTCTATCTTGTACTTGCGTATACCAGCAACCTTTCAAATAATACTGCGTGGGAGAGTTGTTGAGCATCATAACATTGCTGATGACCTAAAATTTCAAGAATATATCTTGTATAGACCTCAAACTGGGGGTACTGTGGAGGGTCAAGTTATTACGACTATTGGATTTCTAAACGATGCTCCATATGTCAGTTACCACGGCTTCAATGTTTATCACAAGAATCGTCTGATACTGCCGTATTGGCAGGTTGTGAGCTATTTAGACAGCAGGGGTCGTGGAGTTGTTGGTGTTTTGGAAGCAGATTTTTTTGAGCCGAGTAATAACAAACAAGATTTTGAGAGAACTTCTCTTTTTCAGAAACTTGATCGAAGTCCGTTTGAAGGAGATGACGTGGGAATACTGATGATGTTTCTATTGGACTTTGGCAGGGATTATCACTGTGGACTAATTGGGTATCAGGTAAAGAAAAAGCTTAAACCAGTGACCCCACAAAGTGGCGTTCATCAATCTATCACATTGGGCCAAAGTTCCCCTGCTCTTGGTAGGAAAAACACAGTACTTAGAAAATCTGGGCCATCAATTTCAAGCACCTTAAGGAAATCTGTGCAAGGAACGATGAAGAGGAAAGAACATGATGATATTCTGCCGGTTGAAAATGTGAAAGGGGCCAAGGTGATCAATACTGGGAAAAGTCAGTCTGTACAGCCGGGGAATCCTACTGGAAATCAGCTGAAAGATCAAGAGGCTAAAAATCTGATGCAACAGAACAAGAAGCTACGATCTAAATGCTTGGAATATGAGAAGAGGGAGGAGGAACTAAATCTTAAGGTGGCACAGCTTAAGAAGGAAATGAAAGACGTTGACGATGAATACTCTCTAATGTTGGCTGAATTAGAAGCGTTGGGGGATGTCAAGGAAGAAAAGGGTACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005911 GO:0006139 GO:0006259 GO:0006282 GO:0006304 GO:0006305 GO:0006306 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009506 GO:0009507 GO:0009526 GO:0009536 GO:0009889 GO:0009892 GO:0009941 GO:0009987 GO:0010468 GO:0010556 GO:0010605 GO:0010629 GO:0016070 GO:0016458 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0030054 GO:0031047 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0031935 GO:0031967 GO:0031975 GO:0032101 GO:0032103 GO:0032259 GO:0033043 GO:0033044 GO:0034641 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044728 GO:0046483 GO:0046983 GO:0048518 GO:0048519 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051052 GO:0051128 GO:0051171 GO:0051252 GO:0055044 GO:0060255 GO:0060968 GO:0065007 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0080188 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1902275 GO:1902288 GO:1902290 GO:1903506 GO:2000112 GO:2001020 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HATPase_c_3

Protein Analysis

641

Amino Acids

72.73

Weight (kDa)

8.4

Isoelectric Point (pI)

37.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HATPase_c_3 PF13589 46 - 141 2.8e-16 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c PF02518 47 - 125 1.6e-06 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Morc6_S5 PF17942 326 - 453 9.7e-52 Morc6 ribosomal protein S5 domain 2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 828
Acc36I ACCTGC 1 cut(s) 1228
AccB7I CCANNNNNTGG 2 cut(s) 227, 1487
AccI GTMKAC 1 cut(s) 1015
AccII CGCG 1 cut(s) 56
AciI CCGC 5 cut(s) 54, 289, 383, 403, 549
AclWI GGATC 3 cut(s) 90, 169, 872
AcoI YGGCCR 1 cut(s) 337
AcsI RAATTY 2 cut(s) 668, 1085
AcuI CTGAAG 2 cut(s) 297, 547
AdeI CACNNNGTG 1 cut(s) 1487
AfaI GTAC 6 cut(s) 367, 1007, 1126, 1551, 1695, 1921
AfiI CCNNNNNNNGG 9 cut(s) 184, 227, 409, 487, 655, 1118, 1373, 1487, 1532
AflII CTTAAG 3 cut(s) 1585, 1817, 1832
AjiI CACGTC 1 cut(s) 1384
AjnI CCWGG 1 cut(s) 408
AleI CACNNNNGTG 1 cut(s) 449
Alw21I GWGCWC 1 cut(s) 805
Alw26I GTCTC 4 cut(s) 367, 462, 680, 756
AlwI GGATC 3 cut(s) 90, 169, 872
AlwNI CAGNNNCTG 1 cut(s) 770
Ama87I CYCGRG 1 cut(s) 447
AoxI GGCC 6 cut(s) 186, 337, 494, 1513, 1565, 1659
ApeKI GCWGC 1 cut(s) 603
ApoI RAATTY 2 cut(s) 668, 1085
AseI ATTAAT 2 cut(s) 86, 114
AspLEI GCGC 1 cut(s) 288
AspS9I GGNCC 6 cut(s) 70, 186, 271, 1513, 1565, 1659
AsuC2I CCSGG 4 cut(s) 236, 448, 449, 1701
AsuHPI GGTGA 2 cut(s) 436, 1678
AvaI CYCGRG 1 cut(s) 447
AvaII GGWCC 2 cut(s) 70, 271
BaeI ACNNNNGTAYC 2 cut(s) 1214, 1247
BalI TGGCCA 1 cut(s) 339
BanII GRGCYC 1 cut(s) 805
BbsI GAAGAC 1 cut(s) 553
Bbv12I GWGCWC 1 cut(s) 805
BbvI GCAGC 1 cut(s) 615
BccI CCATC 6 cut(s) 221, 251, 842, 927, 981, 1576
BceAI ACGGC 4 cut(s) 280, 721, 1207, 1213
BcgI CGANNNNNNTGC 2 cut(s) 1761, 1795
BciT130I CCWGG 1 cut(s) 410
BciVI GTATCC 1 cut(s) 898
BclI TGATCA 1 cut(s) 1668
BcnI CCSGG 4 cut(s) 236, 448, 449, 1701
BcoDI GTCTC 4 cut(s) 367, 462, 680, 756
BfaI CTAG 2 cut(s) 47, 438
BfmI CTRYAG 1 cut(s) 743
BfrI CTTAAG 3 cut(s) 1585, 1817, 1832
BfuAI ACCTGC 1 cut(s) 1228
BfuI GTATCC 1 cut(s) 898
BglI GCCNNNNNGGC 1 cut(s) 1234
BisI GCNGC 3 cut(s) 289, 403, 604
BlpI GCTNAGC 1 cut(s) 771
BlsI GCNGC 3 cut(s) 290, 404, 605
BmcAI AGTACT 2 cut(s) 367, 1551
Bme1390I CCNGG 5 cut(s) 236, 410, 448, 449, 1701
Bme18I GGWCC 2 cut(s) 70, 271
BmeT110I CYCGRG 1 cut(s) 447
BmgBI CACGTC 1 cut(s) 1384
BmgT120I GGNCC 6 cut(s) 70, 186, 271, 1513, 1565, 1659
BmiI GGNNCC 4 cut(s) 187, 273, 646, 1660
BmrFI CCNGG 5 cut(s) 236, 410, 448, 449, 1701
BmrI ACTGGG 2 cut(s) 1128, 1686
BmsI GCATC 4 cut(s) 40, 1069, 1159, 1740
BmuI ACTGGG 2 cut(s) 1128, 1686
BpiI GAAGAC 1 cut(s) 553
BplI GAGNNNNNCTC 2 cut(s) 1324, 1356
BpmI CTGGAG 1 cut(s) 535
Bpu1102I GCTNAGC 1 cut(s) 771
BpuMI CCSGG 4 cut(s) 236, 448, 449, 1701
BsaBI GATNNNNATC 1 cut(s) 876
BsaI GGTCTC 1 cut(s) 756
BsaJI CCNNGG 5 cut(s) 447, 882, 1189, 1662, 1700
BsaWI WCCGGW 1 cut(s) 12
BsaXI ACNNNNNCTCC 2 cut(s) 1368, 1398
Bsc4I CCNNNNNNNGG 9 cut(s) 184, 227, 409, 487, 655, 1118, 1373, 1487, 1532
Bse118I RCCGGY 1 cut(s) 1639
Bse1I ACTGG 5 cut(s) 363, 1123, 1472, 1681, 1717
Bse3DI GCAATG 3 cut(s) 562, 957, 1068
Bse8I GATNNNNATC 1 cut(s) 876
BseBI CCWGG 1 cut(s) 410
BseDI CCNNGG 5 cut(s) 447, 882, 1189, 1662, 1700
BseGI GGATG 4 cut(s) 232, 391, 938, 1906
BseJI GATNNNNATC 1 cut(s) 876
BseLI CCNNNNNNNGG 9 cut(s) 184, 227, 409, 487, 655, 1118, 1373, 1487, 1532
BseMI GCAATG 3 cut(s) 562, 957, 1068
BseMII CTCAG 2 cut(s) 675, 762
BseNI ACTGG 5 cut(s) 363, 1123, 1472, 1681, 1717
BseRI GAGGAG 1 cut(s) 1817
BseXI GCAGC 1 cut(s) 615
BsgI GTGCAG 1 cut(s) 876
Bsh1236I CGCG 1 cut(s) 56
BshFI GGCC 6 cut(s) 188, 339, 496, 1515, 1567, 1661
BsiHKAI GWGCWC 1 cut(s) 805
BsiHKCI CYCGRG 1 cut(s) 447
BsiSI CCGG 5 cut(s) 13, 236, 448, 1640, 1700
BslFI GGGAC 1 cut(s) 823
BslI CCNNNNNNNGG 9 cut(s) 184, 227, 409, 487, 655, 1118, 1373, 1487, 1532
BsmAI GTCTC 4 cut(s) 367, 462, 680, 756
BsmFI GGGAC 1 cut(s) 823
BsnI GGCC 6 cut(s) 188, 339, 496, 1515, 1567, 1661
Bso31I GGTCTC 1 cut(s) 756
BsoBI CYCGRG 1 cut(s) 447
Bsp1286I GDGCHC 1 cut(s) 805
Bsp1407I TGTACA 1 cut(s) 1693
Bsp143I GATC 8 cut(s) 95, 174, 583, 877, 1357, 1668, 1729, 1772
Bsp1720I GCTNAGC 1 cut(s) 771
BspACI CCGC 5 cut(s) 54, 289, 383, 403, 549
BspANI GGCC 6 cut(s) 188, 339, 496, 1515, 1567, 1661
BspCNI CTCAG 2 cut(s) 676, 763
BspFNI CGCG 1 cut(s) 56
BspLI GGNNCC 4 cut(s) 187, 273, 646, 1660
BspMI ACCTGC 1 cut(s) 1228
BspPI GGATC 3 cut(s) 90, 169, 872
BspQI GCTCTTC 1 cut(s) 518
BspTI CTTAAG 3 cut(s) 1585, 1817, 1832
BspTNI GGTCTC 1 cut(s) 756
BsrDI GCAATG 3 cut(s) 562, 957, 1068
BsrFI RCCGGY 1 cut(s) 1639
BsrGI TGTACA 1 cut(s) 1693
BsrI ACTGG 5 cut(s) 363, 1123, 1472, 1681, 1717
BssAI RCCGGY 1 cut(s) 1639
BssECI CCNNGG 5 cut(s) 447, 882, 1189, 1662, 1700
BssMI GATC 8 cut(s) 95, 174, 583, 877, 1357, 1668, 1729, 1772
BssNAI GTATAC 1 cut(s) 1016
BssT1I CCWWGG 2 cut(s) 882, 1662
Bst1107I GTATAC 1 cut(s) 1016
Bst2UI CCWGG 1 cut(s) 410
Bst4CI ACNGT 8 cut(s) 74, 104, 466, 747, 766, 1129, 1433, 1549
Bst6I CTCTTC 3 cut(s) 518, 1607, 1790
BstAFI CTTAAG 3 cut(s) 1585, 1817, 1832
BstAPI GCANNNNNTGC 1 cut(s) 434
BstAUI TGTACA 1 cut(s) 1693
BstDEI CTNAG 4 cut(s) 650, 684, 771, 1553
BstDSI CCRYGG 1 cut(s) 1189
BstF5I GGATG 4 cut(s) 232, 391, 938, 1906
BstFNI CGCG 1 cut(s) 56
BstHHI GCGC 1 cut(s) 288
BstKTI GATC 8 cut(s) 98, 177, 586, 880, 1360, 1671, 1732, 1775
BstMAI GTCTC 4 cut(s) 367, 462, 680, 756
BstMBI GATC 8 cut(s) 95, 174, 583, 877, 1357, 1668, 1729, 1772
BstMWI GCNNNNNNNGC 3 cut(s) 16, 434, 1234
BstNI CCWGG 1 cut(s) 410
BstSCI CCNGG 5 cut(s) 234, 408, 446, 447, 1699
BstSFI CTRYAG 1 cut(s) 743
BstUI CGCG 1 cut(s) 56
BstV1I GCAGC 1 cut(s) 615
BstV2I GAAGAC 1 cut(s) 553
BstX2I RGATCY 2 cut(s) 95, 174
BstYI RGATCY 2 cut(s) 95, 174
BstZ17I GTATAC 1 cut(s) 1016
BsuI GTATCC 1 cut(s) 898
BsuRI GGCC 6 cut(s) 188, 339, 496, 1515, 1567, 1661
BtgI CCRYGG 1 cut(s) 1189
BtrI CACGTC 1 cut(s) 1384
BtsCI GGATG 4 cut(s) 232, 391, 938, 1906
BtsIMutI CAGTG 4 cut(s) 752, 771, 1429, 1479
BveI ACCTGC 1 cut(s) 1228
CaiI CAGNNNCTG 1 cut(s) 770
CfoI GCGC 1 cut(s) 288
Cfr10I RCCGGY 1 cut(s) 1639
Cfr13I GGNCC 6 cut(s) 70, 186, 271, 1513, 1565, 1659
Cfr9I CCCGGG 1 cut(s) 447
CseI GACGC 1 cut(s) 45
Csp6I GTAC 6 cut(s) 366, 1006, 1125, 1550, 1694, 1920
CviAII CATG 5 cut(s) 107, 268, 806, 986, 1625
CviQI GTAC 6 cut(s) 366, 1006, 1125, 1550, 1694, 1920
DdeI CTNAG 4 cut(s) 650, 684, 771, 1553
DpnI GATC 8 cut(s) 97, 176, 585, 879, 1359, 1670, 1731, 1774
DpnII GATC 8 cut(s) 95, 174, 583, 877, 1357, 1668, 1729, 1772
DraIII CACNNNGTG 1 cut(s) 1487
EaeI YGGCCR 1 cut(s) 337
Eam1104I CTCTTC 3 cut(s) 518, 1607, 1790
EarI CTCTTC 3 cut(s) 518, 1607, 1790
Ecl136II GAGCTC 1 cut(s) 803
Eco130I CCWWGG 2 cut(s) 882, 1662
Eco147I AGGCCT 1 cut(s) 496
Eco24I GRGCYC 1 cut(s) 805
Eco31I GGTCTC 1 cut(s) 756
Eco47I GGWCC 2 cut(s) 70, 271
Eco53kI GAGCTC 1 cut(s) 803
Eco57I CTGAAG 2 cut(s) 297, 547
Eco88I CYCGRG 1 cut(s) 447
EcoICRI GAGCTC 1 cut(s) 803
EcoRI GAATTC 1 cut(s) 668
EcoRII CCWGG 1 cut(s) 408
EcoT14I CCWWGG 2 cut(s) 882, 1662
EcoT22I ATGCAT 1 cut(s) 123
EcoT38I GRGCYC 1 cut(s) 805
ErhI CCWWGG 2 cut(s) 882, 1662
FaeI CATG 5 cut(s) 110, 271, 809, 989, 1628
FaqI GGGAC 1 cut(s) 823
FatI CATG 5 cut(s) 106, 267, 805, 985, 1624
FauNDI CATATG 1 cut(s) 1177
FbaI TGATCA 1 cut(s) 1668
FblI GTMKAC 1 cut(s) 1015
Fnu4HI GCNGC 3 cut(s) 289, 403, 604
FokI GGATG 4 cut(s) 239, 398, 945, 1913
FriOI GRGCYC 1 cut(s) 805
Fsp4HI GCNGC 3 cut(s) 289, 403, 604
FspBI CTAG 2 cut(s) 47, 438
GlaI GCGC 1 cut(s) 287
GluI GCNGC 3 cut(s) 289, 403, 604
GsuI CTGGAG 1 cut(s) 535
HaeIII GGCC 6 cut(s) 188, 339, 496, 1515, 1567, 1661
HapII CCGG 5 cut(s) 13, 236, 448, 1640, 1700
HgaI GACGC 1 cut(s) 45
HhaI GCGC 1 cut(s) 288
Hin1II CATG 5 cut(s) 110, 271, 809, 989, 1628
Hin6I GCGC 1 cut(s) 286
HinP1I GCGC 1 cut(s) 286
HincII GTYRAC 1 cut(s) 1855
HindII GTYRAC 1 cut(s) 1855
HindIII AAGCTT 1 cut(s) 1463
HinfI GANTC 4 cut(s) 441, 476, 1213, 1705
HpaII CCGG 5 cut(s) 13, 236, 448, 1640, 1700
HphI GGTGA 2 cut(s) 436, 1678
Hpy166II GTNNAC 4 cut(s) 991, 1016, 1436, 1855
Hpy188I TCNGA 5 cut(s) 100, 313, 1221, 1350, 1749
Hpy188III TCNNGA 6 cut(s) 68, 251, 358, 514, 1091, 1733
Hpy8I GTNNAC 4 cut(s) 991, 1016, 1436, 1855
Hpy99I CGWCG 1 cut(s) 104
HpyAV CCTTC 3 cut(s) 507, 1367, 1831
HpyCH4III ACNGT 8 cut(s) 74, 104, 466, 747, 766, 1129, 1433, 1549
HpyCH4IV ACGT 2 cut(s) 1383, 1851
HpyCH4V TGCA 8 cut(s) 31, 121, 164, 428, 703, 857, 1600, 1753
HpyF10VI GCNNNNNNNGC 3 cut(s) 16, 434, 1234
HpyF3I CTNAG 4 cut(s) 650, 684, 771, 1553
HpySE526I ACGT 2 cut(s) 1383, 1851
Hsp92II CATG 5 cut(s) 110, 271, 809, 989, 1628
HspAI GCGC 1 cut(s) 286
Ksp22I TGATCA 1 cut(s) 1668
Kzo9I GATC 8 cut(s) 95, 174, 583, 877, 1357, 1668, 1729, 1772
LguI GCTCTTC 1 cut(s) 518
LmnI GCTCC 3 cut(s) 15, 800, 1177
Lsp1109I GCAGC 1 cut(s) 615
LweI GCATC 4 cut(s) 40, 1069, 1159, 1740
MaeI CTAG 2 cut(s) 47, 438
MaeII ACGT 2 cut(s) 1383, 1851
MaeIII GTNAC 4 cut(s) 134, 260, 1184, 1474
MalI GATC 8 cut(s) 97, 176, 585, 879, 1359, 1670, 1731, 1774
MboI GATC 8 cut(s) 95, 174, 583, 877, 1357, 1668, 1729, 1772
MboII GAAGA 5 cut(s) 535, 553, 1624, 1807, 1922
MflI RGATCY 2 cut(s) 95, 174
MhlI GDGCHC 1 cut(s) 805
MlsI TGGCCA 1 cut(s) 339
MluCI AATT 9 cut(s) 83, 111, 246, 668, 785, 1085, 1440, 1572, 1883
MluNI TGGCCA 1 cut(s) 339
MmeI TCCRAC 1 cut(s) 123
Mox20I TGGCCA 1 cut(s) 339
Mph1103I ATGCAT 1 cut(s) 123
MscI TGGCCA 1 cut(s) 339
MslI CAYNNNNRTG 1 cut(s) 449
Msp20I TGGCCA 1 cut(s) 339
MspA1I CMGCKG 2 cut(s) 291, 1723
MspCI CTTAAG 3 cut(s) 1585, 1817, 1832
MspI CCGG 5 cut(s) 13, 236, 448, 1640, 1700
MspR9I CCNGG 5 cut(s) 236, 410, 448, 449, 1701
MvaI CCWGG 1 cut(s) 410
MvnI CGCG 1 cut(s) 56
MwoI GCNNNNNNNGC 3 cut(s) 16, 434, 1234
NciI CCSGG 4 cut(s) 236, 448, 449, 1701
NdeI CATATG 1 cut(s) 1177
NdeII GATC 8 cut(s) 95, 174, 583, 877, 1357, 1668, 1729, 1772
NlaIII CATG 5 cut(s) 110, 271, 809, 989, 1628
NlaIV GGNNCC 4 cut(s) 187, 273, 646, 1660
NmeAIII GCCGAG 1 cut(s) 1332
NmuCI GTSAC 1 cut(s) 1474
NsiI ATGCAT 1 cut(s) 123
OliI CACNNNNGTG 1 cut(s) 449
PceI AGGCCT 1 cut(s) 496
PciSI GCTCTTC 1 cut(s) 518
PfeI GAWTC 4 cut(s) 441, 476, 1213, 1705
PflMI CCANNNNNTGG 2 cut(s) 227, 1487
PkrI GCNGC 3 cut(s) 290, 404, 605
PshBI ATTAAT 2 cut(s) 86, 114
PsiI TTATAA 1 cut(s) 828
Psp124BI GAGCTC 1 cut(s) 805
Psp6I CCWGG 1 cut(s) 408
PspGI CCWGG 1 cut(s) 408
PspN4I GGNNCC 4 cut(s) 187, 273, 646, 1660
PspPI GGNCC 6 cut(s) 70, 186, 271, 1513, 1565, 1659
PstNI CAGNNNCTG 1 cut(s) 770
PsuI RGATCY 2 cut(s) 95, 174
PvuII CAGCTG 1 cut(s) 1723
RsaI GTAC 6 cut(s) 367, 1007, 1126, 1551, 1695, 1921
RsaNI GTAC 6 cut(s) 366, 1006, 1125, 1550, 1694, 1920
RseI CAYNNNNRTG 1 cut(s) 449
SacI GAGCTC 1 cut(s) 805
SapI GCTCTTC 1 cut(s) 518
SatI GCNGC 3 cut(s) 289, 403, 604
Sau3AI GATC 8 cut(s) 95, 174, 583, 877, 1357, 1668, 1729, 1772
Sau96I GGNCC 6 cut(s) 70, 186, 271, 1513, 1565, 1659
ScaI AGTACT 2 cut(s) 367, 1551
ScrFI CCNGG 5 cut(s) 236, 410, 448, 449, 1701
SduI GDGCHC 1 cut(s) 805
SfaNI GCATC 4 cut(s) 40, 1069, 1159, 1740
SfcI CTRYAG 1 cut(s) 743
SinI GGWCC 2 cut(s) 70, 271
SmaI CCCGGG 1 cut(s) 449
SmiMI CAYNNNNRTG 1 cut(s) 449
SmlI CTYRAG 3 cut(s) 1585, 1817, 1832
SmoI CTYRAG 3 cut(s) 1585, 1817, 1832
Sse9I AATT 9 cut(s) 83, 111, 246, 668, 785, 1085, 1440, 1572, 1883
SseBI AGGCCT 1 cut(s) 496
SsiI CCGC 5 cut(s) 54, 289, 383, 403, 549
SspMI CTAG 2 cut(s) 47, 438
SstI GAGCTC 1 cut(s) 805
StuI AGGCCT 1 cut(s) 496
StyD4I CCNGG 5 cut(s) 234, 408, 446, 447, 1699
StyI CCWWGG 2 cut(s) 882, 1662
TaaI ACNGT 8 cut(s) 74, 104, 466, 747, 766, 1129, 1433, 1549
TaiI ACGT 2 cut(s) 1386, 1854
TaqI TCGA 3 cut(s) 323, 870, 1360
TasI AATT 9 cut(s) 83, 111, 246, 668, 785, 1085, 1440, 1572, 1883
TatI WGTACW 4 cut(s) 365, 1005, 1549, 1693
TauI GCSGC 2 cut(s) 291, 405
TfiI GAWTC 4 cut(s) 441, 476, 1213, 1705
TscAI CASTG 4 cut(s) 752, 771, 1436, 1479
TseFI GTSAC 1 cut(s) 1474
TseI GCWGC 1 cut(s) 603
Tsp45I GTSAC 1 cut(s) 1474
TspDTI ATGAA 5 cut(s) 963, 1484, 1625, 1859, 1875
TspGWI ACGGA 1 cut(s) 1356
TspMI CCCGGG 1 cut(s) 447
TspRI CASTG 4 cut(s) 752, 771, 1436, 1479
Van91I CCANNNNNTGG 2 cut(s) 227, 1487
Vha464I CTTAAG 3 cut(s) 1585, 1817, 1832
VpaK11BI GGWCC 2 cut(s) 70, 271
VspI ATTAAT 2 cut(s) 86, 114
XapI RAATTY 2 cut(s) 668, 1085
XcmI CCANNNNNNNNNTGG 2 cut(s) 347, 416
XmaI CCCGGG 1 cut(s) 447
XmiI GTMKAC 1 cut(s) 1015
XspI CTAG 2 cut(s) 47, 438
ZrmI AGTACT 2 cut(s) 367, 1551
Zsp2I ATGCAT 1 cut(s) 123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.