Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD03G1067400.v1.1 MD07G1131900.v1.1 MD07G1146700.v1.1 MD11G1096900.v1.1 MD14G1181800.v1.1 |
| prunus_persica | Prupe.2G224400_v2.0.a1 Prupe.3G163200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0277791 RchiOBHm_Chr6g0282951 |
| rosa_multiflora | Rmu_sc0004140.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00399880 |
| rosa_rugosa | Rorug06G0385900 |
| rosa_samantha | Rh2AG556600 Rh5AG417400 Rh6DG219000 Rh7AG433800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 12 |
| AciI | CCGC | 5 cut(s) | 12, 99, 106, 126, 136 |
| AclWI | GGATC | 2 cut(s) | 146, 155 |
| AcyI | GRCGYC | 1 cut(s) | 129 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 125 |
| AjnI | CCWGG | 1 cut(s) | 81 |
| AluBI | AGCT | 1 cut(s) | 116 |
| AluI | AGCT | 1 cut(s) | 116 |
| AlwI | GGATC | 2 cut(s) | 146, 155 |
| BbvCI | CCTCAGC | 1 cut(s) | 68 |
| BccI | CCATC | 1 cut(s) | 110 |
| BceAI | ACGGC | 1 cut(s) | 93 |
| BciT130I | CCWGG | 1 cut(s) | 83 |
| BfaI | CTAG | 1 cut(s) | 113 |
| BisI | GCNGC | 2 cut(s) | 13, 127 |
| BlsI | GCNGC | 2 cut(s) | 14, 128 |
| Bme1390I | CCNGG | 1 cut(s) | 83 |
| BmiI | GGNNCC | 1 cut(s) | 46 |
| BmrFI | CCNGG | 1 cut(s) | 83 |
| BmsI | GCATC | 1 cut(s) | 96 |
| Bpu10I | CCTNAGC | 1 cut(s) | 68 |
| BsaHI | GRCGYC | 1 cut(s) | 129 |
| BsaJI | CCNNGG | 1 cut(s) | 82 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 125 |
| BseBI | CCWGG | 1 cut(s) | 83 |
| BseDI | CCNNGG | 1 cut(s) | 82 |
| BseGI | GGATG | 2 cut(s) | 78, 102 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 125 |
| BseMII | CTCAG | 1 cut(s) | 59 |
| BseRI | GAGGAG | 1 cut(s) | 57 |
| BseYI | CCCAGC | 1 cut(s) | 31 |
| Bsh1236I | CGCG | 1 cut(s) | 12 |
| BslFI | GGGAC | 1 cut(s) | 86 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 125 |
| BsmFI | GGGAC | 1 cut(s) | 86 |
| Bsp143I | GATC | 2 cut(s) | 138, 160 |
| BspACI | CCGC | 5 cut(s) | 12, 99, 106, 126, 136 |
| BspCNI | CTCAG | 1 cut(s) | 60 |
| BspFNI | CGCG | 1 cut(s) | 12 |
| BspLI | GGNNCC | 1 cut(s) | 46 |
| BspPI | GGATC | 2 cut(s) | 146, 155 |
| BssECI | CCNNGG | 1 cut(s) | 82 |
| BssMI | GATC | 2 cut(s) | 138, 160 |
| BssNI | GRCGYC | 1 cut(s) | 129 |
| Bst2UI | CCWGG | 1 cut(s) | 83 |
| BstACI | GRCGYC | 1 cut(s) | 129 |
| BstC8I | GCNNGC | 1 cut(s) | 99 |
| BstDEI | CTNAG | 1 cut(s) | 68 |
| BstF5I | GGATG | 2 cut(s) | 78, 102 |
| BstFNI | CGCG | 1 cut(s) | 12 |
| BstKTI | GATC | 2 cut(s) | 141, 163 |
| BstMBI | GATC | 2 cut(s) | 138, 160 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 21 |
| BstNI | CCWGG | 1 cut(s) | 83 |
| BstSCI | CCNGG | 1 cut(s) | 81 |
| BstUI | CGCG | 1 cut(s) | 12 |
| BtsCI | GGATG | 2 cut(s) | 78, 102 |
| Cac8I | GCNNGC | 1 cut(s) | 99 |
| CseI | GACGC | 2 cut(s) | 18, 118 |
| CviJI | RGCY | 4 cut(s) | 31, 47, 97, 116 |
| CviKI_1 | RGCY | 4 cut(s) | 31, 47, 97, 116 |
| DdeI | CTNAG | 1 cut(s) | 68 |
| DpnI | GATC | 2 cut(s) | 140, 162 |
| DpnII | GATC | 2 cut(s) | 138, 160 |
| EciI | GGCGGA | 1 cut(s) | 95 |
| EcoRII | CCWGG | 1 cut(s) | 81 |
| FaiI | YATR | 1 cut(s) | 92 |
| FaqI | GGGAC | 1 cut(s) | 86 |
| FauI | CCCGC | 1 cut(s) | 106 |
| Fnu4HI | GCNGC | 2 cut(s) | 13, 127 |
| FokI | GGATG | 2 cut(s) | 65, 89 |
| Fsp4HI | GCNGC | 2 cut(s) | 13, 127 |
| FspBI | CTAG | 1 cut(s) | 113 |
| GluI | GCNGC | 2 cut(s) | 13, 127 |
| GsaI | CCCAGC | 1 cut(s) | 35 |
| HgaI | GACGC | 2 cut(s) | 18, 118 |
| Hin1I | GRCGYC | 1 cut(s) | 129 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 21 |
| HpyF3I | CTNAG | 1 cut(s) | 68 |
| Hsp92I | GRCGYC | 1 cut(s) | 129 |
| Kzo9I | GATC | 2 cut(s) | 138, 160 |
| LmnI | GCTCC | 2 cut(s) | 44, 121 |
| LpnPI | CCDG | 4 cut(s) | 17, 68, 95, 133 |
| LweI | GCATC | 1 cut(s) | 96 |
| MaeI | CTAG | 1 cut(s) | 113 |
| MalI | GATC | 2 cut(s) | 140, 162 |
| MboI | GATC | 2 cut(s) | 138, 160 |
| MboII | GAAGA | 1 cut(s) | 137 |
| MnlI | CCTC | 5 cut(s) | 14, 21, 35, 45, 63 |
| MspR9I | CCNGG | 1 cut(s) | 83 |
| MvaI | CCWGG | 1 cut(s) | 83 |
| MvnI | CGCG | 1 cut(s) | 12 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 21 |
| NdeII | GATC | 2 cut(s) | 138, 160 |
| NlaIV | GGNNCC | 1 cut(s) | 46 |
| PkrI | GCNGC | 2 cut(s) | 14, 128 |
| Psp6I | CCWGG | 1 cut(s) | 81 |
| PspFI | CCCAGC | 1 cut(s) | 31 |
| PspGI | CCWGG | 1 cut(s) | 81 |
| PspN4I | GGNNCC | 1 cut(s) | 46 |
| SatI | GCNGC | 2 cut(s) | 13, 127 |
| Sau3AI | GATC | 2 cut(s) | 138, 160 |
| ScrFI | CCNGG | 1 cut(s) | 83 |
| SetI | ASST | 2 cut(s) | 66, 118 |
| SfaNI | GCATC | 1 cut(s) | 96 |
| SsiI | CCGC | 5 cut(s) | 12, 99, 106, 126, 136 |
| SspMI | CTAG | 1 cut(s) | 113 |
| StyD4I | CCNGG | 1 cut(s) | 81 |
| TauI | GCSGC | 2 cut(s) | 15, 129 |
| TspGWI | ACGGA | 1 cut(s) | 153 |
| XspI | CTAG | 1 cut(s) | 113 |