Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD03G1067400.v1.1 MD07G1131900.v1.1 MD07G1146700.v1.1 MD11G1096900.v1.1 MD14G1181800.v1.1 |
| prunus_persica | Prupe.2G224400_v2.0.a1 Prupe.3G163200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0277791 RchiOBHm_Chr6g0282951 |
| rosa_multiflora | Rmu_sc0004140.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00399880 |
| rosa_rugosa | Rorug06G0385900 |
| rosa_samantha | Rh2AG556600 Rh5AG417400 Rh6DG219000 Rh7AG433800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 150 |
| AccII | CGCG | 1 cut(s) | 12 |
| AcyI | GRCGYC | 1 cut(s) | 147 |
| AfaI | GTAC | 1 cut(s) | 185 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 112 |
| AgsI | TTSAA | 1 cut(s) | 193 |
| AjnI | CCWGG | 1 cut(s) | 81 |
| AspLEI | GCGC | 1 cut(s) | 160 |
| BbvCI | CCTCAGC | 1 cut(s) | 68 |
| BccI | CCATC | 2 cut(s) | 130, 136 |
| BceAI | ACGGC | 1 cut(s) | 105 |
| BciT130I | CCWGG | 1 cut(s) | 83 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 126 |
| Bme1390I | CCNGG | 1 cut(s) | 83 |
| BmiI | GGNNCC | 1 cut(s) | 46 |
| BmrFI | CCNGG | 1 cut(s) | 83 |
| BmsI | GCATC | 1 cut(s) | 96 |
| Bpu10I | CCTNAGC | 1 cut(s) | 68 |
| BsaHI | GRCGYC | 1 cut(s) | 147 |
| BsaJI | CCNNGG | 2 cut(s) | 82, 121 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 112 |
| Bse1I | ACTGG | 1 cut(s) | 10 |
| BseBI | CCWGG | 1 cut(s) | 83 |
| BseDI | CCNNGG | 2 cut(s) | 82, 121 |
| BseGI | GGATG | 3 cut(s) | 78, 102, 147 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 112 |
| BseMII | CTCAG | 1 cut(s) | 59 |
| BseNI | ACTGG | 1 cut(s) | 10 |
| BseRI | GAGGAG | 1 cut(s) | 57 |
| BseYI | CCCAGC | 1 cut(s) | 31 |
| Bsh1236I | CGCG | 1 cut(s) | 12 |
| BslFI | GGGAC | 1 cut(s) | 86 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 112 |
| BsmFI | GGGAC | 1 cut(s) | 86 |
| BspCNI | CTCAG | 1 cut(s) | 60 |
| BspFNI | CGCG | 1 cut(s) | 12 |
| BspLI | GGNNCC | 1 cut(s) | 46 |
| BsrI | ACTGG | 1 cut(s) | 10 |
| BssECI | CCNNGG | 2 cut(s) | 82, 121 |
| BssNI | GRCGYC | 1 cut(s) | 147 |
| Bst2UI | CCWGG | 1 cut(s) | 83 |
| BstACI | GRCGYC | 1 cut(s) | 147 |
| BstC8I | GCNNGC | 1 cut(s) | 118 |
| BstDEI | CTNAG | 1 cut(s) | 68 |
| BstDSI | CCRYGG | 1 cut(s) | 121 |
| BstF5I | GGATG | 3 cut(s) | 78, 102, 147 |
| BstFNI | CGCG | 1 cut(s) | 12 |
| BstHHI | GCGC | 1 cut(s) | 160 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 126, 166 |
| BstNI | CCWGG | 1 cut(s) | 83 |
| BstSCI | CCNGG | 1 cut(s) | 81 |
| BstUI | CGCG | 1 cut(s) | 12 |
| BtgI | CCRYGG | 1 cut(s) | 121 |
| BtsCI | GGATG | 3 cut(s) | 78, 102, 147 |
| Cac8I | GCNNGC | 1 cut(s) | 118 |
| CfoI | GCGC | 1 cut(s) | 160 |
| CseI | GACGC | 1 cut(s) | 18 |
| Csp6I | GTAC | 1 cut(s) | 184 |
| CviJI | RGCY | 4 cut(s) | 31, 47, 97, 116 |
| CviKI_1 | RGCY | 4 cut(s) | 31, 47, 97, 116 |
| CviQI | GTAC | 1 cut(s) | 184 |
| DdeI | CTNAG | 1 cut(s) | 68 |
| EcoRII | CCWGG | 1 cut(s) | 81 |
| FaiI | YATR | 1 cut(s) | 156 |
| FaqI | GGGAC | 1 cut(s) | 86 |
| FokI | GGATG | 3 cut(s) | 65, 89, 154 |
| GlaI | GCGC | 1 cut(s) | 159 |
| GsaI | CCCAGC | 1 cut(s) | 35 |
| HgaI | GACGC | 1 cut(s) | 18 |
| HhaI | GCGC | 1 cut(s) | 160 |
| Hin1I | GRCGYC | 1 cut(s) | 147 |
| Hin6I | GCGC | 1 cut(s) | 158 |
| HinP1I | GCGC | 1 cut(s) | 158 |
| HinfI | GANTC | 1 cut(s) | 178 |
| Hpy99I | CGWCG | 2 cut(s) | 111, 152 |
| HpyCH4IV | ACGT | 1 cut(s) | 147 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 126, 166 |
| HpyF3I | CTNAG | 1 cut(s) | 68 |
| HpySE526I | ACGT | 1 cut(s) | 147 |
| Hsp92I | GRCGYC | 1 cut(s) | 147 |
| HspAI | GCGC | 1 cut(s) | 158 |
| LmnI | GCTCC | 1 cut(s) | 44 |
| LpnPI | CCDG | 6 cut(s) | 17, 68, 95, 98, 155, 160 |
| LweI | GCATC | 1 cut(s) | 96 |
| MaeII | ACGT | 1 cut(s) | 147 |
| MlyI | GAGTC | 1 cut(s) | 172 |
| MnlI | CCTC | 5 cut(s) | 14, 21, 35, 45, 63 |
| MseI | TTAA | 1 cut(s) | 162 |
| MslI | CAYNNNNRTG | 1 cut(s) | 134 |
| MspR9I | CCNGG | 1 cut(s) | 83 |
| MvaI | CCWGG | 1 cut(s) | 83 |
| MvnI | CGCG | 1 cut(s) | 12 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 126, 166 |
| NlaIV | GGNNCC | 1 cut(s) | 46 |
| PflFI | GACNNNGTC | 1 cut(s) | 149 |
| PleI | GAGTC | 1 cut(s) | 172 |
| PpsI | GAGTC | 1 cut(s) | 172 |
| Psp6I | CCWGG | 1 cut(s) | 81 |
| PspFI | CCCAGC | 1 cut(s) | 31 |
| PspGI | CCWGG | 1 cut(s) | 81 |
| PspN4I | GGNNCC | 1 cut(s) | 46 |
| PsyI | GACNNNGTC | 1 cut(s) | 149 |
| RsaI | GTAC | 1 cut(s) | 185 |
| RsaNI | GTAC | 1 cut(s) | 184 |
| RseI | CAYNNNNRTG | 1 cut(s) | 134 |
| SaqAI | TTAA | 1 cut(s) | 162 |
| SchI | GAGTC | 1 cut(s) | 172 |
| ScrFI | CCNGG | 1 cut(s) | 83 |
| SetI | ASST | 2 cut(s) | 66, 150 |
| SfaNI | GCATC | 1 cut(s) | 96 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 134 |
| StyD4I | CCNGG | 1 cut(s) | 81 |
| TaiI | ACGT | 1 cut(s) | 150 |
| Tru1I | TTAA | 1 cut(s) | 162 |
| Tru9I | TTAA | 1 cut(s) | 162 |
| TspGWI | ACGGA | 1 cut(s) | 95 |
| Tth111I | GACNNNGTC | 1 cut(s) | 149 |
| ZraI | GACGTC | 1 cut(s) | 148 |