Rh6DG219000

Belongs to the actin family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
38961914 .. 38970240
8327 bp
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UTR
Exon/CDS
Intron
Rh6DG219000.1

Sequence Viewer

Length: 225 bp
ATGGGTGGAAGACAAAGAGGAAGACAGAGATTGAAGCTTACTCACAAGAGCCATGATTCAGACTGGAATGGAGGAGAAATTAGTGTTTGTGTTTATGTTGCGAATATAGCATTGAGAGACTGCCTATTGGTTGATCCTAAAGAGCTTGCAGACCCATCTTTTAACTCCCAGCAACAGAGGGAAAGGTTCTCACATCTTTTGCATCTGGCTGTGCTACCTCATTAG

Protein Analysis

74

Amino Acids

8.45

Weight (kDa)

8.8

Isoelectric Point (pI)

40.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 128
AgsI TTSAA 1 cut(s) 34
AluBI AGCT 2 cut(s) 37, 145
AluI AGCT 2 cut(s) 37, 145
Alw26I GTCTC 1 cut(s) 111
AlwI GGATC 1 cut(s) 128
BbsI GAAGAC 2 cut(s) 16, 28
BccI CCATC 1 cut(s) 163
BcoDI GTCTC 1 cut(s) 111
BmsI GCATC 1 cut(s) 211
BpiI GAAGAC 2 cut(s) 16, 28
Bse1I ACTGG 1 cut(s) 68
BseNI ACTGG 1 cut(s) 68
BseRI GAGGAG 1 cut(s) 87
BseYI CCCAGC 1 cut(s) 168
BsmAI GTCTC 1 cut(s) 111
Bsp143I GATC 1 cut(s) 133
BspPI GGATC 1 cut(s) 128
BsrI ACTGG 1 cut(s) 68
BssMI GATC 1 cut(s) 133
BstC8I GCNNGC 1 cut(s) 147
BstKTI GATC 1 cut(s) 136
BstMAI GTCTC 1 cut(s) 111
BstMBI GATC 1 cut(s) 133
BstMWI GCNNNNNNNGC 1 cut(s) 107
BstV2I GAAGAC 2 cut(s) 16, 28
Cac8I GCNNGC 1 cut(s) 147
CviAII CATG 1 cut(s) 53
CviJI RGCY 4 cut(s) 37, 51, 145, 209
CviKI_1 RGCY 4 cut(s) 37, 51, 145, 209
DpnI GATC 1 cut(s) 135
DpnII GATC 1 cut(s) 133
FaeI CATG 1 cut(s) 56
FaiI YATR 3 cut(s) 54, 96, 107
FatI CATG 1 cut(s) 52
GsaI CCCAGC 1 cut(s) 172
Hin1II CATG 1 cut(s) 56
HindIII AAGCTT 1 cut(s) 35
HinfI GANTC 1 cut(s) 56
Hpy188I TCNGA 1 cut(s) 61
HpyCH4V TGCA 2 cut(s) 149, 202
HpyF10VI GCNNNNNNNGC 1 cut(s) 107
Hsp92II CATG 1 cut(s) 56
Kzo9I GATC 1 cut(s) 133
LpnPI CCDG 3 cut(s) 49, 182, 191
LweI GCATC 1 cut(s) 211
MalI GATC 1 cut(s) 135
MboI GATC 1 cut(s) 133
MboII GAAGA 2 cut(s) 21, 33
MluCI AATT 1 cut(s) 78
MnlI CCTC 3 cut(s) 11, 65, 171
MseI TTAA 1 cut(s) 162
MwoI GCNNNNNNNGC 1 cut(s) 107
NdeII GATC 1 cut(s) 133
NlaIII CATG 1 cut(s) 56
PfeI GAWTC 1 cut(s) 56
PspFI CCCAGC 1 cut(s) 168
SaqAI TTAA 1 cut(s) 162
Sau3AI GATC 1 cut(s) 133
SetI ASST 4 cut(s) 39, 147, 188, 220
SfaNI GCATC 1 cut(s) 211
SgeI CNNG 6 cut(s) 58, 65, 76, 158, 181, 218
Sse9I AATT 1 cut(s) 78
TasI AATT 1 cut(s) 78
TfiI GAWTC 1 cut(s) 56
Tru1I TTAA 1 cut(s) 162
Tru9I TTAA 1 cut(s) 162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.