Rh7AG433800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
58392522 .. 58398136
5615 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG433800.1

Sequence Viewer

Length: 246 bp
ATGTTTTCATCGTTCTGCCCTAAACTAGAGAGGAATCATGGGGATGATGTCCTACAAGCTCTGGGCAATCTTCGAGATTCTAGGCGTGGAAATGGAGGCGCAGATCGACATTGTAAGGTCTTCCGCGAAAGCATCCAGGGCATAAAGCCGGTGACGGCTCGGTTCTCAAGGTCGGCGAGGAGAAGGAGATCAGAAAGCAGGGATATTGAAGAAGGAACTCCTCACTATATCCCAAGCTTGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

81

Amino Acids

9.28

Weight (kDa)

10.71

Isoelectric Point (pI)

87.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 126
AciI CCGC 1 cut(s) 124
AgsI TTSAA 1 cut(s) 209
AjnI CCWGG 1 cut(s) 135
AluBI AGCT 2 cut(s) 59, 237
AluI AGCT 2 cut(s) 59, 237
AspLEI GCGC 1 cut(s) 101
AsuHPI GGTGA 1 cut(s) 163
BbsI GAAGAC 1 cut(s) 112
BceAI ACGGC 1 cut(s) 171
BciT130I CCWGG 1 cut(s) 137
BfaI CTAG 2 cut(s) 26, 81
Bme1390I CCNGG 1 cut(s) 137
BmrFI CCNGG 1 cut(s) 137
BmsI GCATC 1 cut(s) 141
BpiI GAAGAC 1 cut(s) 112
BpuEI CTTGAG 1 cut(s) 151
BsaJI CCNNGG 1 cut(s) 136
Bse118I RCCGGY 1 cut(s) 148
BseBI CCWGG 1 cut(s) 137
BseDI CCNNGG 1 cut(s) 136
BseGI GGATG 2 cut(s) 49, 132
BseRI GAGGAG 2 cut(s) 193, 210
Bsh1236I CGCG 1 cut(s) 126
BsiSI CCGG 1 cut(s) 149
Bsp143I GATC 2 cut(s) 103, 188
BspACI CCGC 1 cut(s) 124
BspFNI CGCG 1 cut(s) 126
BsrFI RCCGGY 1 cut(s) 148
BssAI RCCGGY 1 cut(s) 148
BssECI CCNNGG 1 cut(s) 136
BssMI GATC 2 cut(s) 103, 188
Bst2UI CCWGG 1 cut(s) 137
BstF5I GGATG 2 cut(s) 49, 132
BstFNI CGCG 1 cut(s) 126
BstHHI GCGC 1 cut(s) 101
BstKTI GATC 2 cut(s) 106, 191
BstMBI GATC 2 cut(s) 103, 188
BstMWI GCNNNNNNNGC 1 cut(s) 138
BstNI CCWGG 1 cut(s) 137
BstSCI CCNGG 1 cut(s) 135
BstUI CGCG 1 cut(s) 126
BstV2I GAAGAC 1 cut(s) 112
BtsCI GGATG 2 cut(s) 49, 132
CfoI GCGC 1 cut(s) 101
Cfr10I RCCGGY 1 cut(s) 148
CviAII CATG 1 cut(s) 38
CviJI RGCY 4 cut(s) 59, 148, 158, 237
CviKI_1 RGCY 4 cut(s) 59, 148, 158, 237
DpnI GATC 2 cut(s) 105, 190
DpnII GATC 2 cut(s) 103, 188
EcoRII CCWGG 1 cut(s) 135
FaeI CATG 1 cut(s) 41
FaiI YATR 3 cut(s) 39, 143, 228
FatI CATG 1 cut(s) 37
FokI GGATG 2 cut(s) 56, 119
FspBI CTAG 2 cut(s) 26, 81
GlaI GCGC 1 cut(s) 100
HapII CCGG 1 cut(s) 149
HhaI GCGC 1 cut(s) 101
Hin1II CATG 1 cut(s) 41
Hin6I GCGC 1 cut(s) 99
HinP1I GCGC 1 cut(s) 99
HindIII AAGCTT 1 cut(s) 235
HinfI GANTC 2 cut(s) 34, 77
HpaII CCGG 1 cut(s) 149
HphI GGTGA 1 cut(s) 163
Hpy188I TCNGA 1 cut(s) 193
Hpy188III TCNNGA 1 cut(s) 74
HpyAV CCTTC 2 cut(s) 177, 206
HpyF10VI GCNNNNNNNGC 1 cut(s) 138
Hsp92II CATG 1 cut(s) 41
HspAI GCGC 1 cut(s) 99
Kzo9I GATC 2 cut(s) 103, 188
LpnPI CCDG 5 cut(s) 47, 122, 149, 162, 184
LweI GCATC 1 cut(s) 141
MaeI CTAG 2 cut(s) 26, 81
MaeIII GTNAC 1 cut(s) 151
MalI GATC 2 cut(s) 105, 190
MboI GATC 2 cut(s) 103, 188
MboII GAAGA 3 cut(s) 62, 112, 221
MnlI CCTC 5 cut(s) 24, 89, 171, 231, 234
MslI CAYNNNNRTG 1 cut(s) 42
MspI CCGG 1 cut(s) 149
MspR9I CCNGG 1 cut(s) 137
MvaI CCWGG 1 cut(s) 137
MvnI CGCG 1 cut(s) 126
MwoI GCNNNNNNNGC 1 cut(s) 138
NdeII GATC 2 cut(s) 103, 188
NlaIII CATG 1 cut(s) 41
NmuCI GTSAC 1 cut(s) 151
PfeI GAWTC 2 cut(s) 34, 77
Psp6I CCWGG 1 cut(s) 135
PspGI CCWGG 1 cut(s) 135
RseI CAYNNNNRTG 1 cut(s) 42
Sau3AI GATC 2 cut(s) 103, 188
ScrFI CCNGG 1 cut(s) 137
SetI ASST 5 cut(s) 61, 120, 173, 239, 245
SfaNI GCATC 1 cut(s) 141
SmiMI CAYNNNNRTG 1 cut(s) 42
SmlI CTYRAG 2 cut(s) 166, 238
SmoI CTYRAG 2 cut(s) 166, 238
SsiI CCGC 1 cut(s) 124
SspMI CTAG 2 cut(s) 26, 81
StyD4I CCNGG 1 cut(s) 135
TaqI TCGA 2 cut(s) 73, 106
TfiI GAWTC 2 cut(s) 34, 77
TseFI GTSAC 1 cut(s) 151
Tsp45I GTSAC 1 cut(s) 151
XspI CTAG 2 cut(s) 26, 81
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.