MD07G1163000.v1.1
NAC Family

(NAC) domain-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
23807937 .. 23809065
1129 bp
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UTR
Exon/CDS
Intron
MD07G1163000.v1.1.491

Sequence Viewer

Length: 189 bp
ATGGGAAACATCAGTAGCAGCACCACCACATCAACAACCGCACAATCGGTGCCGGACATGGTGGCTGCGATCAGATTCCATCCCACTGAAAAGGAAATGGCAGACTTCTTGAGGAAGAAGATGAAATATAACAACTCCCAAGCCTGCCACTTCCTCCCTGTCATCGATGTCTGCAAGTTCGAGCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

63

Amino Acids

6.95

Weight (kDa)

7.82

Isoelectric Point (pI)

64.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 49
AciI CCGC 1 cut(s) 39
ApeKI GCWGC 2 cut(s) 18, 65
BanI GGYRCC 1 cut(s) 49
BbvI GCAGC 2 cut(s) 30, 52
BccI CCATC 1 cut(s) 87
BisI GCNGC 2 cut(s) 19, 66
BlsI GCNGC 2 cut(s) 20, 67
BmiI GGNNCC 1 cut(s) 51
BpuEI CTTGAG 1 cut(s) 130
Bsa29I ATCGAT 1 cut(s) 165
BseCI ATCGAT 1 cut(s) 165
BseGI GGATG 1 cut(s) 79
BseXI GCAGC 2 cut(s) 30, 52
BshNI GGYRCC 1 cut(s) 49
BshVI ATCGAT 1 cut(s) 165
BsiSI CCGG 1 cut(s) 53
Bsp143I GATC 1 cut(s) 69
BspACI CCGC 1 cut(s) 39
BspDI ATCGAT 1 cut(s) 165
BspLI GGNNCC 1 cut(s) 51
BspT107I GGYRCC 1 cut(s) 49
BssMI GATC 1 cut(s) 69
BstC8I GCNNGC 1 cut(s) 145
BstDEI CTNAG 1 cut(s) 186
BstF5I GGATG 1 cut(s) 79
BstKTI GATC 1 cut(s) 72
BstMBI GATC 1 cut(s) 69
BstV1I GCAGC 2 cut(s) 30, 52
Bsu15I ATCGAT 1 cut(s) 165
BsuTUI ATCGAT 1 cut(s) 165
BtsCI GGATG 1 cut(s) 79
BtsIMutI CAGTG 1 cut(s) 84
Cac8I GCNNGC 1 cut(s) 145
ClaI ATCGAT 1 cut(s) 165
CviAII CATG 1 cut(s) 58
CviJI RGCY 3 cut(s) 65, 143, 184
CviKI_1 RGCY 3 cut(s) 65, 143, 184
DdeI CTNAG 1 cut(s) 186
DpnI GATC 1 cut(s) 71
DpnII GATC 1 cut(s) 69
FaeI CATG 1 cut(s) 61
FaiI YATR 2 cut(s) 59, 129
FatI CATG 1 cut(s) 57
Fnu4HI GCNGC 2 cut(s) 19, 66
FokI GGATG 1 cut(s) 66
Fsp4HI GCNGC 2 cut(s) 19, 66
GluI GCNGC 2 cut(s) 19, 66
HapII CCGG 1 cut(s) 53
Hin1II CATG 1 cut(s) 61
HinfI GANTC 1 cut(s) 75
HpaII CCGG 1 cut(s) 53
Hpy188I TCNGA 1 cut(s) 74
Hpy188III TCNNGA 1 cut(s) 109
HpyCH4V TGCA 1 cut(s) 174
HpyF3I CTNAG 1 cut(s) 186
Hsp92II CATG 1 cut(s) 61
Kzo9I GATC 1 cut(s) 69
LpnPI CCDG 3 cut(s) 66, 157, 171
Lsp1109I GCAGC 2 cut(s) 30, 52
MalI GATC 1 cut(s) 71
MboI GATC 1 cut(s) 69
MboII GAAGA 2 cut(s) 127, 130
MnlI CCTC 2 cut(s) 105, 164
MspI CCGG 1 cut(s) 53
NdeII GATC 1 cut(s) 69
NlaIII CATG 1 cut(s) 61
NlaIV GGNNCC 1 cut(s) 51
PfeI GAWTC 1 cut(s) 75
PkrI GCNGC 2 cut(s) 20, 67
PspN4I GGNNCC 1 cut(s) 51
SatI GCNGC 2 cut(s) 19, 66
Sau3AI GATC 1 cut(s) 69
SgeI CNNG 6 cut(s) 65, 70, 121, 152, 156, 170
SmlI CTYRAG 1 cut(s) 109
SmoI CTYRAG 1 cut(s) 109
SsiI CCGC 1 cut(s) 39
TaqI TCGA 2 cut(s) 165, 180
TfiI GAWTC 1 cut(s) 75
TscAI CASTG 1 cut(s) 91
TseI GCWGC 2 cut(s) 18, 65
TspDTI ATGAA 1 cut(s) 137
TspRI CASTG 1 cut(s) 91
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.