Prupe.2G202200_v2.0.a1
NAC Family

(NAC) domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0007535
Physical Location & Seq
Reverse (-)
23848561 .. 23850429
1869 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G202200.1

Sequence Viewer

Length: 1476 bp
ATGAGCAGCAGTAGCAGCACAACAACAACAGAAGCATGGGTGCTGGACTTGCTGCCTGAGTTCAGATTCCGTCCCTCTGATGAGAAAATGGTGAACCTTTTATGGAAGAAGATAAATGGCAAGGACTACCAAGTCATGCCTGAAATCAATTACAAGCCTTGGGATTTACCTGATAATGAATCTATCCCACTTTTTCTTCGCTTCTTGAAGCAGCTGATGCAGGGCAAGGCCTCCATCATTCCTGAAATCGATTTCTACAAGCACGAGCCTTGGGATTTAGCTGGTAATCTGTCTCTCTCTCTCTTCACTTTCCATTTTCTAATTTCCAAGACTTGTTTTGTGTTGCATTTTGCAGGAGCAGGACTCATGTTCCCAGATTCTCCATATCAAGCTAGGACGTGGTTCTGCTTCAGCCGACCTGATTACAAATACGTCGACAGTCCTCGCCGCAACAGGCTCACAGAGAAGGGCTTCTGGAAAATCACAGGCCAGCCACGAGAAGTCAAGTCTCGACAACTCTCCAAATCGCTCACTTGCAAAAAGAAGACCTTGACCTTCCATTTAGGTCGTCCGAAAAAGTCGAGCAAGACAGACTGGGTCAAGCAGGAGTATTATCTCACTCCAAATGACCCGGGTTCTAACCCCAATCAGCTGAGTGGCCTTGTTCTTTACCGCGTCAAGTATAGGTCAGCTGACTATGAGTCTGATAATAACTATGTGCTTGGAACTGGCAATCTTAATGATGGTGAACCTGGTGGCTTTGTTTCATCTGATTTTGATGATATGATTCAAGAGCCATGTGATCAGCAAGAACATCTGGATTCACCTTCTCCTCCTCCTGAGCCGCCTCGGCCACACCAGCTACCTCAGTTGGGAAATGTTCATGGTAGTACTGGTGACTACATTGCCTCTAATTCTGATAACCAAGCTGCTGCTATCCATCATATGATTACAGACGAAGAAGAACTTCTGGCCTACAAAGAGCTTGAACGTGTTCTTCTTGGCAGTGGCAATCCTGATGATGGTGAAGCTCGTACCTGTGTTTCATCTGATATGCTTAGAGAGTTATGTGCTCAGCTAGGAGAAGATCTGGATTCACCCTTTCCTCCTCCTGGGCCACCTGAGCTGGGAAATGCTCCTGATGTCTATACTGATGAATGCAGGAGCTGGCCATCCCCAATTGAGGATAATGATTCTTCTCTTCCAAACAAGAATAATATTCCAACCAATTATGACAGCAAACCAGTTAGCAACACAGCCTCTAACTTCGAGAATCAAACTAAAGATGAAAGGATTCCTGAGGTTTATTCTCAATCAGAAGAAAATCTGCAATCGTTCTTTCGTTCACTTGAGGTAGAGAATTACACATTGCCTTCCCCAATATTATACGTGGAACAGGGAGATGTTCTGCATGCCAATAACTATATTGGATGCAATGAGTCGCAATATGCGGCTCTTTTCCCACAAAGTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

492

Amino Acids

55.69

Weight (kDa)

4.85

Isoelectric Point (pI)

54.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 131
AccI GTMKAC 1 cut(s) 435
AccII CGCG 1 cut(s) 675
AciI CCGC 4 cut(s) 448, 673, 845, 1451
AcoI YGGCCR 2 cut(s) 851, 1169
AcuI CTGAAG 1 cut(s) 394
AfaI GTAC 2 cut(s) 892, 1036
AfiI CCNNNNNNNGG 5 cut(s) 872, 1022, 1112, 1127, 1183
AflIII ACRYGT 1 cut(s) 991
AgsI TTSAA 3 cut(s) 208, 791, 989
AhdI GACNNNNNGTC 1 cut(s) 700
AjiI CACGTC 1 cut(s) 399
AjnI CCWGG 2 cut(s) 751, 1111
Alw21I GWGCWC 1 cut(s) 1075
Alw26I GTCTC 2 cut(s) 297, 513
AlwNI CAGNNNCTG 1 cut(s) 1167
Ama87I CYCGRG 1 cut(s) 631
AoxI GGCC 7 cut(s) 228, 487, 658, 851, 972, 1115, 1169
ApeKI GCWGC 6 cut(s) 6, 15, 52, 211, 929, 932
Asp700I GAANNNNTTC 4 cut(s) 470, 966, 993, 1293
AspS9I GGNCC 1 cut(s) 1115
AsuC2I CCSGG 2 cut(s) 632, 633
AsuHPI GGTGA 6 cut(s) 103, 758, 816, 908, 1037, 1089
AvaI CYCGRG 1 cut(s) 631
AxyI CCTNAGG 1 cut(s) 1299
BalI TGGCCA 1 cut(s) 1171
BauI CACGAG 2 cut(s) 263, 495
BbsI GAAGAC 1 cut(s) 551
Bbv12I GWGCWC 1 cut(s) 1075
BbvI GCAGC 6 cut(s) 18, 27, 39, 223, 916, 919
BccI CCATC 5 cut(s) 242, 737, 948, 1016, 1180
BciT130I CCWGG 2 cut(s) 753, 1113
BclI TGATCA 1 cut(s) 802
BcnI CCSGG 2 cut(s) 632, 633
BcoDI GTCTC 2 cut(s) 297, 513
BfaI CTAG 2 cut(s) 393, 1079
BglI GCCNNNNNGGC 1 cut(s) 850
BglII AGATCT 1 cut(s) 1087
BisI GCNGC 9 cut(s) 7, 16, 53, 212, 448, 845, 930, 933, 1452
BlpI GCTNAGC 1 cut(s) 1074
BlsI GCNGC 9 cut(s) 8, 17, 54, 213, 449, 846, 931, 934, 1453
BmcAI AGTACT 1 cut(s) 892
Bme1390I CCNGG 4 cut(s) 632, 633, 753, 1113
BmeRI GACNNNNNGTC 1 cut(s) 700
BmeT110I CYCGRG 1 cut(s) 631
BmgBI CACGTC 1 cut(s) 399
BmgT120I GGNCC 1 cut(s) 1115
BmrFI CCNGG 4 cut(s) 632, 633, 753, 1113
BmrI ACTGGG 1 cut(s) 604
BmsI GCATC 2 cut(s) 207, 1421
BmuI ACTGGG 1 cut(s) 604
BpiI GAAGAC 1 cut(s) 551
BplI GAGNNNNNCTC 2 cut(s) 348, 380
Bpu10I CCTNAGC 2 cut(s) 840, 1122
Bpu1102I GCTNAGC 1 cut(s) 1074
BpuEI CTTGAG 1 cut(s) 1370
BpuMI CCSGG 2 cut(s) 632, 633
Bsa29I ATCGAT 1 cut(s) 249
BsaAI YACGTR 1 cut(s) 1390
BsaJI CCNNGG 5 cut(s) 158, 269, 631, 848, 1112
Bsc4I CCNNNNNNNGG 5 cut(s) 872, 1022, 1112, 1127, 1183
Bse1I ACTGG 4 cut(s) 599, 733, 898, 1244
Bse21I CCTNAGG 1 cut(s) 1299
Bse3DI GCAATG 3 cut(s) 903, 1367, 1441
BseBI CCWGG 2 cut(s) 753, 1113
BseCI ATCGAT 1 cut(s) 249
BseDI CCNNGG 5 cut(s) 158, 269, 631, 848, 1112
BseGI GGATG 2 cut(s) 1172, 1436
BseLI CCNNNNNNNGG 5 cut(s) 872, 1022, 1112, 1127, 1183
BseMI GCAATG 3 cut(s) 903, 1367, 1441
BseMII CTCAG 7 cut(s) 48, 644, 831, 881, 1088, 1113, 1290
BseNI ACTGG 4 cut(s) 599, 733, 898, 1244
BseRI GAGGAG 3 cut(s) 822, 825, 1098
BseXI GCAGC 6 cut(s) 18, 27, 39, 223, 916, 919
BseYI CCCAGC 1 cut(s) 1126
Bsh1236I CGCG 1 cut(s) 675
BshFI GGCC 7 cut(s) 230, 489, 660, 853, 974, 1117, 1171
BshVI ATCGAT 1 cut(s) 249
BsiHKAI GWGCWC 1 cut(s) 1075
BsiHKCI CYCGRG 1 cut(s) 631
BsiSI CCGG 1 cut(s) 632
BslFI GGGAC 1 cut(s) 57
BslI CCNNNNNNNGG 5 cut(s) 872, 1022, 1112, 1127, 1183
BsmAI GTCTC 2 cut(s) 297, 513
BsmFI GGGAC 1 cut(s) 57
BsmI GAATGC 1 cut(s) 1163
BsnI GGCC 7 cut(s) 230, 489, 660, 853, 974, 1117, 1171
BsoBI CYCGRG 1 cut(s) 631
Bsp1286I GDGCHC 1 cut(s) 1075
Bsp143I GATC 2 cut(s) 802, 1087
Bsp1720I GCTNAGC 1 cut(s) 1074
BspACI CCGC 4 cut(s) 448, 673, 845, 1451
BspANI GGCC 7 cut(s) 230, 489, 660, 853, 974, 1117, 1171
BspCNI CTCAG 7 cut(s) 49, 645, 832, 880, 1087, 1114, 1291
BspDI ATCGAT 1 cut(s) 249
BspFNI CGCG 1 cut(s) 675
BsrDI GCAATG 3 cut(s) 903, 1367, 1441
BsrI ACTGG 4 cut(s) 599, 733, 898, 1244
BssECI CCNNGG 5 cut(s) 158, 269, 631, 848, 1112
BssMI GATC 2 cut(s) 802, 1087
BssSI CACGAG 2 cut(s) 263, 495
BssT1I CCWWGG 2 cut(s) 158, 269
Bst2BI CACGAG 2 cut(s) 263, 495
Bst2UI CCWGG 2 cut(s) 753, 1113
Bst4CI ACNGT 1 cut(s) 440
Bst6I CTCTTC 2 cut(s) 308, 1206
BstAPI GCANNNNNTGC 1 cut(s) 217
BstBAI YACGTR 1 cut(s) 1390
BstC8I GCNNGC 3 cut(s) 491, 1169, 1413
BstDEI CTNAG 8 cut(s) 57, 653, 840, 867, 1058, 1074, 1122, 1299
BstF5I GGATG 2 cut(s) 1172, 1436
BstFNI CGCG 1 cut(s) 675
BstKTI GATC 2 cut(s) 805, 1090
BstMAI GTCTC 2 cut(s) 297, 513
BstMBI GATC 2 cut(s) 802, 1087
BstMWI GCNNNNNNNGC 7 cut(s) 12, 15, 49, 217, 850, 859, 1123
BstNI CCWGG 2 cut(s) 753, 1113
BstNSI RCATGY 1 cut(s) 1415
BstSCI CCNGG 4 cut(s) 630, 631, 751, 1111
BstUI CGCG 1 cut(s) 675
BstV1I GCAGC 6 cut(s) 18, 27, 39, 223, 916, 919
BstV2I GAAGAC 1 cut(s) 551
BstX2I RGATCY 1 cut(s) 1087
BstYI RGATCY 1 cut(s) 1087
Bsu15I ATCGAT 1 cut(s) 249
Bsu36I CCTNAGG 1 cut(s) 1299
BsuRI GGCC 7 cut(s) 230, 489, 660, 853, 974, 1117, 1171
BsuTUI ATCGAT 1 cut(s) 249
BtrI CACGTC 1 cut(s) 399
BtsCI GGATG 2 cut(s) 1172, 1436
BtsI GCAGTG 1 cut(s) 1012
BtsIMutI CAGTG 1 cut(s) 1012
Cac8I GCNNGC 3 cut(s) 491, 1169, 1413
CaiI CAGNNNCTG 1 cut(s) 1167
Cfr13I GGNCC 1 cut(s) 1115
Cfr9I CCCGGG 1 cut(s) 631
ClaI ATCGAT 1 cut(s) 249
CseI GACGC 1 cut(s) 664
CsiI ACCWGGT 1 cut(s) 751
Csp6I GTAC 2 cut(s) 891, 1035
CviAII CATG 6 cut(s) 36, 136, 367, 798, 884, 1412
CviQI GTAC 2 cut(s) 891, 1035
DdeI CTNAG 8 cut(s) 57, 653, 840, 867, 1058, 1074, 1122, 1299
DpnI GATC 2 cut(s) 804, 1089
DpnII GATC 2 cut(s) 802, 1087
DrdI GACNNNNNNGTC 1 cut(s) 131
DriI GACNNNNNGTC 1 cut(s) 700
DseDI GACNNNNNNGTC 1 cut(s) 131
EaeI YGGCCR 2 cut(s) 851, 1169
Eam1104I CTCTTC 2 cut(s) 308, 1206
Eam1105I GACNNNNNGTC 1 cut(s) 700
EarI CTCTTC 2 cut(s) 308, 1206
Eco130I CCWWGG 2 cut(s) 158, 269
Eco147I AGGCCT 1 cut(s) 230
Eco57I CTGAAG 1 cut(s) 394
Eco81I CCTNAGG 1 cut(s) 1299
Eco88I CYCGRG 1 cut(s) 631
EcoRII CCWGG 2 cut(s) 751, 1111
EcoT14I CCWWGG 2 cut(s) 158, 269
ErhI CCWWGG 2 cut(s) 158, 269
FaeI CATG 6 cut(s) 39, 139, 370, 801, 887, 1415
FalI AAGNNNNNCTT 4 cut(s) 533, 565, 951, 983
FaqI GGGAC 1 cut(s) 57
FatI CATG 6 cut(s) 35, 135, 366, 797, 883, 1411
FauNDI CATATG 1 cut(s) 945
FbaI TGATCA 1 cut(s) 802
FblI GTMKAC 1 cut(s) 435
Fnu4HI GCNGC 9 cut(s) 7, 16, 53, 212, 448, 845, 930, 933, 1452
FokI GGATG 2 cut(s) 1159, 1443
Fsp4HI GCNGC 9 cut(s) 7, 16, 53, 212, 448, 845, 930, 933, 1452
FspBI CTAG 2 cut(s) 393, 1079
GluI GCNGC 9 cut(s) 7, 16, 53, 212, 448, 845, 930, 933, 1452
GsaI CCCAGC 1 cut(s) 1130
HaeIII GGCC 7 cut(s) 230, 489, 660, 853, 974, 1117, 1171
HapII CCGG 1 cut(s) 632
HgaI GACGC 1 cut(s) 664
Hin1II CATG 6 cut(s) 39, 139, 370, 801, 887, 1415
HincII GTYRAC 1 cut(s) 436
HindII GTYRAC 1 cut(s) 436
HpaII CCGG 1 cut(s) 632
HphI GGTGA 6 cut(s) 103, 758, 816, 908, 1037, 1089
Hpy166II GTNNAC 4 cut(s) 94, 436, 749, 1346
Hpy188I TCNGA 8 cut(s) 65, 79, 573, 706, 772, 919, 1051, 1318
Hpy8I GTNNAC 4 cut(s) 94, 436, 749, 1346
Hpy99I CGWCG 1 cut(s) 437
HpyAV CCTTC 4 cut(s) 460, 565, 837, 1383
HpyCH4III ACNGT 1 cut(s) 440
HpyCH4IV ACGT 4 cut(s) 398, 432, 991, 1389
HpyCH4V TGCA 8 cut(s) 220, 346, 353, 537, 1161, 1330, 1411, 1434
HpyF10VI GCNNNNNNNGC 7 cut(s) 12, 15, 49, 217, 850, 859, 1123
HpyF3I CTNAG 8 cut(s) 57, 653, 840, 867, 1058, 1074, 1122, 1299
HpySE526I ACGT 4 cut(s) 398, 432, 991, 1389
Hsp92II CATG 6 cut(s) 39, 139, 370, 801, 887, 1415
Ksp22I TGATCA 1 cut(s) 802
Kzo9I GATC 2 cut(s) 802, 1087
LmnI GCTCC 3 cut(s) 356, 1141, 1164
Lsp1109I GCAGC 6 cut(s) 18, 27, 39, 223, 916, 919
LweI GCATC 2 cut(s) 207, 1421
MabI ACCWGGT 1 cut(s) 751
MaeI CTAG 2 cut(s) 393, 1079
MaeII ACGT 4 cut(s) 398, 432, 991, 1389
MaeIII GTNAC 1 cut(s) 896
MalI GATC 2 cut(s) 804, 1089
MboI GATC 2 cut(s) 802, 1087
MfeI CAATTG 1 cut(s) 1179
MflI RGATCY 1 cut(s) 1087
MhlI GDGCHC 1 cut(s) 1075
MlsI TGGCCA 1 cut(s) 1171
MluCI AATT 6 cut(s) 148, 321, 913, 1179, 1228, 1360
MluNI TGGCCA 1 cut(s) 1171
MlyI GAGTC 3 cut(s) 357, 710, 1448
MmeI TCCRAC 1 cut(s) 1247
Mox20I TGGCCA 1 cut(s) 1171
MroXI GAANNNNTTC 4 cut(s) 470, 966, 993, 1293
MscI TGGCCA 1 cut(s) 1171
MseI TTAA 1 cut(s) 738
Msp20I TGGCCA 1 cut(s) 1171
MspA1I CMGCKG 3 cut(s) 214, 652, 692
MspI CCGG 1 cut(s) 632
MspR9I CCNGG 4 cut(s) 632, 633, 753, 1113
MunI CAATTG 1 cut(s) 1179
Mva1269I GAATGC 1 cut(s) 1163
MvaI CCWGG 2 cut(s) 753, 1113
MvnI CGCG 1 cut(s) 675
MwoI GCNNNNNNNGC 7 cut(s) 12, 15, 49, 217, 850, 859, 1123
NciI CCSGG 2 cut(s) 632, 633
NdeI CATATG 1 cut(s) 945
NdeII GATC 2 cut(s) 802, 1087
NlaIII CATG 6 cut(s) 39, 139, 370, 801, 887, 1415
NmeAIII GCCGAG 1 cut(s) 829
NmuCI GTSAC 1 cut(s) 896
NspI RCATGY 1 cut(s) 1415
PaeI GCATGC 1 cut(s) 1415
PceI AGGCCT 1 cut(s) 230
PctI GAATGC 1 cut(s) 1163
PdmI GAANNNNTTC 4 cut(s) 470, 966, 993, 1293
PfeI GAWTC 9 cut(s) 66, 179, 377, 787, 821, 1094, 1193, 1273, 1294
PflFI GACNNNGTC 1 cut(s) 596
PkrI GCNGC 9 cut(s) 8, 17, 54, 213, 449, 846, 931, 934, 1453
PleI GAGTC 3 cut(s) 357, 709, 1447
PpsI GAGTC 3 cut(s) 357, 709, 1447
Ppu21I YACGTR 1 cut(s) 1390
Psp6I CCWGG 2 cut(s) 751, 1111
PspFI CCCAGC 1 cut(s) 1126
PspGI CCWGG 2 cut(s) 751, 1111
PspPI GGNCC 1 cut(s) 1115
PstNI CAGNNNCTG 1 cut(s) 1167
PsuI RGATCY 1 cut(s) 1087
PsyI GACNNNGTC 1 cut(s) 596
PvuII CAGCTG 3 cut(s) 214, 652, 692
RsaI GTAC 2 cut(s) 892, 1036
RsaNI GTAC 2 cut(s) 891, 1035
SalI GTCGAC 1 cut(s) 434
SaqAI TTAA 1 cut(s) 738
SatI GCNGC 9 cut(s) 7, 16, 53, 212, 448, 845, 930, 933, 1452
Sau3AI GATC 2 cut(s) 802, 1087
Sau96I GGNCC 1 cut(s) 1115
ScaI AGTACT 1 cut(s) 892
SchI GAGTC 3 cut(s) 357, 710, 1448
ScrFI CCNGG 4 cut(s) 632, 633, 753, 1113
SduI GDGCHC 1 cut(s) 1075
SexAI ACCWGGT 1 cut(s) 751
SfaNI GCATC 2 cut(s) 207, 1421
SmaI CCCGGG 1 cut(s) 633
SmlI CTYRAG 1 cut(s) 1349
SmoI CTYRAG 1 cut(s) 1349
SphI GCATGC 1 cut(s) 1415
Sse9I AATT 6 cut(s) 148, 321, 913, 1179, 1228, 1360
SseBI AGGCCT 1 cut(s) 230
SsiI CCGC 4 cut(s) 448, 673, 845, 1451
SspI AATATT 2 cut(s) 1219, 1383
SspMI CTAG 2 cut(s) 393, 1079
StuI AGGCCT 1 cut(s) 230
StyD4I CCNGG 4 cut(s) 630, 631, 751, 1111
StyI CCWWGG 2 cut(s) 158, 269
TaaI ACNGT 1 cut(s) 440
TaiI ACGT 4 cut(s) 401, 435, 994, 1392
TaqI TCGA 5 cut(s) 249, 435, 511, 581, 1269
TasI AATT 6 cut(s) 148, 321, 913, 1179, 1228, 1360
TatI WGTACW 1 cut(s) 890
TauI GCSGC 3 cut(s) 450, 847, 1454
TfiI GAWTC 9 cut(s) 66, 179, 377, 787, 821, 1094, 1193, 1273, 1294
Tru1I TTAA 1 cut(s) 738
Tru9I TTAA 1 cut(s) 738
TscAI CASTG 1 cut(s) 1012
TseFI GTSAC 1 cut(s) 896
TseI GCWGC 6 cut(s) 6, 15, 52, 211, 929, 932
Tsp45I GTSAC 1 cut(s) 896
TspDTI ATGAA 6 cut(s) 192, 756, 872, 1035, 1170, 1302
TspGWI ACGGA 1 cut(s) 59
TspMI CCCGGG 1 cut(s) 631
TspRI CASTG 1 cut(s) 1012
Tth111I GACNNNGTC 1 cut(s) 596
XceI RCATGY 1 cut(s) 1415
XmaI CCCGGG 1 cut(s) 631
XmiI GTMKAC 1 cut(s) 435
XmnI GAANNNNTTC 4 cut(s) 470, 966, 993, 1293
XspI CTAG 2 cut(s) 393, 1079
ZrmI AGTACT 1 cut(s) 892
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.