Prupe.2G201900_v2.0.a1
NAC Family

(NAC) domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0007535
Physical Location & Seq
Reverse (-)
23827555 .. 23834195
6641 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G201900.1

Sequence Viewer

Length: 1374 bp
ATGAGCAGCACAACAACAGAAGCATGGGTGCTGGACTTGCAGCGTGGGCTCAGATACCATCCCCATGAGGAGGAAATGGTGAACCTTTTGAAGAAGCAGGAGGAGGGCAAGGCCTCCCAAGCCCGCCACATCATCCCATACATTGATTTCTATAAGTACGAGCCTAGGGAATTAGCTGGACTCATGTTGCCAGACTCTCCATATCAACCTAGGATGTGGTTTTCCTTCAGCCGACCTCATCACAAATACAACAACAGTCCTCGCTGCAATAGGCTCACAGCGAAGGGCTTCTGGAAAATCACAGGAAAGCCACGAGAAATCAAGTCTCGACAACTCTCCAAATCGGTCACTTGCAAAAAGAGGACCTTGACCTTCCATTTAGGTCGTCCGTCTAAGTGGAGCAAGACCGGCTGGGTCAAGCAGGAGTATTATCTCACTTCAACTGTCCCGGGTTCTAATCTGAGTGGCCTTGTTCTTTTCCGCATGAAGAATAAGTCAGCTCACTATGAGTCTGATACTAAGCAGCAGCAGGATGTTTCAATCTTTGATGAATCAGCTGATCCTGCTATTGGTGGCGACATGGCCTCTGATTCTCAAGATGATCAAGCTGCTGCAAATCATATGATTCCGGAGGCCGAAGAACATCTGCTTGGAAGTGGCAATCATAATGATGGTGAACCTGGTGGCTTTGTTTCATCTGATTTTGATATAATGCAAGAGTTATGTGCTCAGCTAGGACTTGAGCCGCCTCAGCCACACCAGCTACCTCAGCTGGGAAATGTTCCTGGTACTGGTGACTACCTCGCCTCAAATTCTGATAACCAAGCTGCTGCTATCCAACCTATGATTACAGACGAAGAAGAACTTCTGGCCTACAAAGAGCTAGAACGTGTTCTTCTTGACAGTGGCAATCCTGATAATGGTGAACCTGGTAGCTGTGTTTCATCTGATATGCGTCAAGAGTCATGTGCTCAGCCAGGAGAAGATCTGGATTCACCCGTTCTGTCACCTCGGCCACCTGAGCTGGGAAATGCTCCTGATGTCTATACTGATGAATGCGGTAGCTGGCCATCCCAAATTGAGGATAATGATTCTTCTCTTCCAAACAAGGATAATATTCCAACCAATTATGACAGCAAACCAATTAGCAACACAGCCTCTGACTTCGAGAATCAAACTAAAGATGAAAGGATTCCCGAGGTTTATTCTGAATCAGAAGAAAATCTGCAATTGTTCTTTCGTTCACTTGAGGTAGAGGATTACACATTGCCTTCCTCAATATTATACGTGGAACAGGGAGATGTTCTGCATGCCAATAACTATATTGGATGCAATGAGTCGCAAGATGCGGCTCTTTTCCCACAAAGTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

458

Amino Acids

51.16

Weight (kDa)

4.69

Isoelectric Point (pI)

59.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 628
AciI CCGC 5 cut(s) 124, 481, 746, 1059, 1349
AclWI GGATC 1 cut(s) 554
AcoI YGGCCR 2 cut(s) 1013, 1067
AcsI RAATTY 1 cut(s) 811
AcuI CTGAAG 1 cut(s) 211
AfaI GTAC 2 cut(s) 158, 790
AfiI CCNNNNNNNGG 7 cut(s) 70, 569, 773, 791, 920, 1025, 1081
AflIII ACRYGT 1 cut(s) 889
AgsI TTSAA 3 cut(s) 91, 441, 540
AjnI CCWGG 4 cut(s) 679, 784, 928, 976
AjuI GAANNNNNNNTTGG 2 cut(s) 633, 665
Alw21I GWGCWC 2 cut(s) 730, 973
Alw26I GTCTC 1 cut(s) 330
AlwI GGATC 1 cut(s) 554
AlwNI CAGNNNCTG 1 cut(s) 1160
Ama87I CYCGRG 2 cut(s) 448, 1196
Aor13HI TCCGGA 1 cut(s) 628
AoxI GGCC 7 cut(s) 111, 466, 582, 633, 870, 1013, 1067
ApeKI GCWGC 9 cut(s) 6, 40, 264, 523, 526, 608, 611, 827, 830
ApoI RAATTY 1 cut(s) 811
Asp700I GAANNNNTTC 4 cut(s) 287, 864, 891, 1191
AspA2I CCTAGG 2 cut(s) 164, 209
AspS9I GGNCC 1 cut(s) 363
AsuC2I CCSGG 2 cut(s) 449, 450
AsuHPI GGTGA 6 cut(s) 91, 686, 806, 935, 987, 999
AvaI CYCGRG 2 cut(s) 448, 1196
AvaII GGWCC 1 cut(s) 363
AvrII CCTAGG 2 cut(s) 164, 209
BalI TGGCCA 1 cut(s) 1069
BanII GRGCYC 1 cut(s) 51
BauI CACGAG 1 cut(s) 312
Bbv12I GWGCWC 2 cut(s) 730, 973
BbvCI CCTCAGC 2 cut(s) 750, 768
BbvI GCAGC 9 cut(s) 18, 52, 251, 535, 538, 595, 598, 814, 817
BccI CCATC 3 cut(s) 66, 665, 1078
BciT130I CCWGG 4 cut(s) 681, 786, 930, 978
BclI TGATCA 1 cut(s) 601
BcnI CCSGG 2 cut(s) 449, 450
BcoDI GTCTC 1 cut(s) 330
BfaI CTAG 4 cut(s) 165, 210, 734, 884
BglII AGATCT 1 cut(s) 985
BlnI CCTAGG 2 cut(s) 164, 209
BlpI GCTNAGC 2 cut(s) 729, 972
Bme1390I CCNGG 6 cut(s) 449, 450, 681, 786, 930, 978
Bme18I GGWCC 1 cut(s) 363
BmeT110I CYCGRG 2 cut(s) 448, 1196
BmgT120I GGNCC 1 cut(s) 363
BmrFI CCNGG 6 cut(s) 449, 450, 681, 786, 930, 978
BmsI GCATC 2 cut(s) 1319, 1336
Bpu10I CCTNAGC 3 cut(s) 750, 768, 1020
Bpu1102I GCTNAGC 2 cut(s) 729, 972
BpuEI CTTGAG 3 cut(s) 579, 761, 1268
BpuMI CCSGG 2 cut(s) 449, 450
BsaAI YACGTR 1 cut(s) 1288
BsaJI CCNNGG 5 cut(s) 164, 209, 448, 1010, 1197
BsaWI WCCGGW 1 cut(s) 628
Bsc4I CCNNNNNNNGG 7 cut(s) 70, 569, 773, 791, 920, 1025, 1081
Bse118I RCCGGY 1 cut(s) 407
Bse1I ACTGG 1 cut(s) 796
Bse3DI GCAATG 2 cut(s) 1265, 1339
BseAI TCCGGA 1 cut(s) 628
BseBI CCWGG 4 cut(s) 681, 786, 930, 978
BseDI CCNNGG 5 cut(s) 164, 209, 448, 1010, 1197
BseGI GGATG 6 cut(s) 58, 132, 219, 538, 1070, 1334
BseLI CCNNNNNNNGG 7 cut(s) 70, 569, 773, 791, 920, 1025, 1081
BseMI GCAATG 2 cut(s) 1265, 1339
BseMII CTCAG 7 cut(s) 64, 452, 743, 764, 782, 986, 1011
BseNI ACTGG 1 cut(s) 796
BseRI GAGGAG 2 cut(s) 83, 116
BseXI GCAGC 9 cut(s) 18, 52, 251, 535, 538, 595, 598, 814, 817
BseYI CCCAGC 3 cut(s) 411, 772, 1024
BshFI GGCC 7 cut(s) 113, 468, 584, 635, 872, 1015, 1069
BsiHKAI GWGCWC 2 cut(s) 730, 973
BsiHKCI CYCGRG 2 cut(s) 448, 1196
BsiSI CCGG 3 cut(s) 408, 449, 629
BslFI GGGAC 1 cut(s) 431
BslI CCNNNNNNNGG 7 cut(s) 70, 569, 773, 791, 920, 1025, 1081
BsmAI GTCTC 1 cut(s) 330
BsmFI GGGAC 1 cut(s) 431
BsmI GAATGC 1 cut(s) 1061
BsnI GGCC 7 cut(s) 113, 468, 584, 635, 872, 1015, 1069
BsoBI CYCGRG 2 cut(s) 448, 1196
Bsp1286I GDGCHC 3 cut(s) 51, 730, 973
Bsp13I TCCGGA 1 cut(s) 628
Bsp143I GATC 3 cut(s) 559, 601, 985
Bsp1720I GCTNAGC 2 cut(s) 729, 972
BspACI CCGC 5 cut(s) 124, 481, 746, 1059, 1349
BspANI GGCC 7 cut(s) 113, 468, 584, 635, 872, 1015, 1069
BspCNI CTCAG 7 cut(s) 63, 453, 742, 763, 781, 985, 1012
BspEI TCCGGA 1 cut(s) 628
BspPI GGATC 1 cut(s) 554
BsrDI GCAATG 2 cut(s) 1265, 1339
BsrFI RCCGGY 1 cut(s) 407
BsrI ACTGG 1 cut(s) 796
BssAI RCCGGY 1 cut(s) 407
BssECI CCNNGG 5 cut(s) 164, 209, 448, 1010, 1197
BssMI GATC 3 cut(s) 559, 601, 985
BssSI CACGAG 1 cut(s) 312
BssT1I CCWWGG 2 cut(s) 164, 209
Bst2BI CACGAG 1 cut(s) 312
Bst2UI CCWGG 4 cut(s) 681, 786, 930, 978
Bst4CI ACNGT 3 cut(s) 257, 445, 905
Bst6I CTCTTC 1 cut(s) 1104
BstBAI YACGTR 1 cut(s) 1288
BstC8I GCNNGC 3 cut(s) 124, 1067, 1311
BstDEI CTNAG 9 cut(s) 50, 393, 461, 519, 729, 750, 768, 972, 1020
BstF5I GGATG 6 cut(s) 58, 132, 219, 538, 1070, 1334
BstKTI GATC 3 cut(s) 562, 604, 988
BstMAI GTCTC 1 cut(s) 330
BstMBI GATC 3 cut(s) 559, 601, 985
BstMWI GCNNNNNNNGC 9 cut(s) 37, 46, 119, 408, 563, 751, 760, 769, 1021
BstNI CCWGG 4 cut(s) 681, 786, 930, 978
BstNSI RCATGY 1 cut(s) 1313
BstSCI CCNGG 6 cut(s) 447, 448, 679, 784, 928, 976
BstV1I GCAGC 9 cut(s) 18, 52, 251, 535, 538, 595, 598, 814, 817
BstX2I RGATCY 1 cut(s) 985
BstYI RGATCY 1 cut(s) 985
BsuRI GGCC 7 cut(s) 113, 468, 584, 635, 872, 1015, 1069
BtsCI GGATG 6 cut(s) 58, 132, 219, 538, 1070, 1334
BtsIMutI CAGTG 1 cut(s) 910
Cac8I GCNNGC 3 cut(s) 124, 1067, 1311
CaiI CAGNNNCTG 1 cut(s) 1160
Cfr10I RCCGGY 1 cut(s) 407
Cfr13I GGNCC 1 cut(s) 363
Cfr9I CCCGGG 1 cut(s) 448
CseI GACGC 1 cut(s) 944
CsiI ACCWGGT 2 cut(s) 679, 928
Csp6I GTAC 2 cut(s) 157, 789
CviAII CATG 7 cut(s) 24, 65, 184, 484, 580, 966, 1310
CviQI GTAC 2 cut(s) 157, 789
DdeI CTNAG 9 cut(s) 50, 393, 461, 519, 729, 750, 768, 972, 1020
DpnI GATC 3 cut(s) 561, 603, 987
DpnII GATC 3 cut(s) 559, 601, 985
EaeI YGGCCR 2 cut(s) 1013, 1067
Eam1104I CTCTTC 1 cut(s) 1104
EarI CTCTTC 1 cut(s) 1104
Eco130I CCWWGG 2 cut(s) 164, 209
Eco147I AGGCCT 1 cut(s) 113
Eco24I GRGCYC 1 cut(s) 51
Eco47I GGWCC 1 cut(s) 363
Eco57I CTGAAG 1 cut(s) 211
Eco88I CYCGRG 2 cut(s) 448, 1196
EcoO109I RGGNCCY 1 cut(s) 363
EcoRII CCWGG 4 cut(s) 679, 784, 928, 976
EcoT14I CCWWGG 2 cut(s) 164, 209
EcoT38I GRGCYC 1 cut(s) 51
ErhI CCWWGG 2 cut(s) 164, 209
FaeI CATG 7 cut(s) 27, 68, 187, 487, 583, 969, 1313
FalI AAGNNNNNCTT 4 cut(s) 350, 382, 849, 881
FaqI GGGAC 1 cut(s) 431
FatI CATG 7 cut(s) 23, 64, 183, 483, 579, 965, 1309
FauI CCCGC 1 cut(s) 131
FauNDI CATATG 1 cut(s) 621
FbaI TGATCA 1 cut(s) 601
FokI GGATG 6 cut(s) 45, 119, 226, 545, 1057, 1341
FriOI GRGCYC 1 cut(s) 51
FspBI CTAG 4 cut(s) 165, 210, 734, 884
GsaI CCCAGC 3 cut(s) 415, 776, 1028
HaeIII GGCC 7 cut(s) 113, 468, 584, 635, 872, 1015, 1069
HapII CCGG 3 cut(s) 408, 449, 629
HgaI GACGC 1 cut(s) 944
Hin1II CATG 7 cut(s) 27, 68, 187, 487, 583, 969, 1313
HpaII CCGG 3 cut(s) 408, 449, 629
HphI GGTGA 6 cut(s) 91, 686, 806, 935, 987, 999
Hpy166II GTNNAC 4 cut(s) 82, 677, 926, 1244
Hpy8I GTNNAC 4 cut(s) 82, 677, 926, 1244
HpyAV CCTTC 4 cut(s) 235, 277, 382, 1281
HpyCH4III ACNGT 3 cut(s) 257, 445, 905
HpyCH4IV ACGT 2 cut(s) 889, 1287
HpyCH4V TGCA 8 cut(s) 40, 267, 354, 614, 715, 1228, 1309, 1332
HpyF10VI GCNNNNNNNGC 9 cut(s) 37, 46, 119, 408, 563, 751, 760, 769, 1021
HpyF3I CTNAG 9 cut(s) 50, 393, 461, 519, 729, 750, 768, 972, 1020
HpySE526I ACGT 2 cut(s) 889, 1287
Hsp92II CATG 7 cut(s) 27, 68, 187, 487, 583, 969, 1313
Kpn2I TCCGGA 1 cut(s) 628
Ksp22I TGATCA 1 cut(s) 601
Kzo9I GATC 3 cut(s) 559, 601, 985
LmnI GCTCC 2 cut(s) 399, 1039
Lsp1109I GCAGC 9 cut(s) 18, 52, 251, 535, 538, 595, 598, 814, 817
LweI GCATC 2 cut(s) 1319, 1336
MabI ACCWGGT 2 cut(s) 679, 928
MaeI CTAG 4 cut(s) 165, 210, 734, 884
MaeII ACGT 2 cut(s) 889, 1287
MaeIII GTNAC 3 cut(s) 346, 794, 1005
MalI GATC 3 cut(s) 561, 603, 987
MboI GATC 3 cut(s) 559, 601, 985
MfeI CAATTG 1 cut(s) 1229
MflI RGATCY 1 cut(s) 985
MhlI GDGCHC 3 cut(s) 51, 730, 973
MlsI TGGCCA 1 cut(s) 1069
MluCI AATT 6 cut(s) 170, 811, 1077, 1126, 1143, 1229
MluNI TGGCCA 1 cut(s) 1069
MlyI GAGTC 5 cut(s) 174, 188, 518, 971, 1346
MmeI TCCRAC 2 cut(s) 862, 1145
Mox20I TGGCCA 1 cut(s) 1069
MroI TCCGGA 1 cut(s) 628
MroXI GAANNNNTTC 4 cut(s) 287, 864, 891, 1191
MscI TGGCCA 1 cut(s) 1069
MslI CAYNNNNRTG 2 cut(s) 63, 669
Msp20I TGGCCA 1 cut(s) 1069
MspA1I CMGCKG 2 cut(s) 557, 772
MspI CCGG 3 cut(s) 408, 449, 629
MspR9I CCNGG 6 cut(s) 449, 450, 681, 786, 930, 978
MunI CAATTG 1 cut(s) 1229
Mva1269I GAATGC 1 cut(s) 1061
MvaI CCWGG 4 cut(s) 681, 786, 930, 978
MwoI GCNNNNNNNGC 9 cut(s) 37, 46, 119, 408, 563, 751, 760, 769, 1021
NciI CCSGG 2 cut(s) 449, 450
NdeI CATATG 1 cut(s) 621
NdeII GATC 3 cut(s) 559, 601, 985
NlaIII CATG 7 cut(s) 27, 68, 187, 487, 583, 969, 1313
NmeAIII GCCGAG 1 cut(s) 991
NmuCI GTSAC 3 cut(s) 346, 794, 1005
NspI RCATGY 1 cut(s) 1313
PaeI GCATGC 1 cut(s) 1313
PceI AGGCCT 1 cut(s) 113
PctI GAATGC 1 cut(s) 1061
PdmI GAANNNNTTC 4 cut(s) 287, 864, 891, 1191
PfeI GAWTC 8 cut(s) 551, 590, 625, 992, 1091, 1171, 1192, 1211
PleI GAGTC 5 cut(s) 174, 188, 517, 970, 1345
PpsI GAGTC 5 cut(s) 174, 188, 517, 970, 1345
Ppu21I YACGTR 1 cut(s) 1288
PpuMI RGGWCCY 1 cut(s) 363
Psp5II RGGWCCY 1 cut(s) 363
Psp6I CCWGG 4 cut(s) 679, 784, 928, 976
PspFI CCCAGC 3 cut(s) 411, 772, 1024
PspGI CCWGG 4 cut(s) 679, 784, 928, 976
PspPI GGNCC 1 cut(s) 363
PspPPI RGGWCCY 1 cut(s) 363
PstNI CAGNNNCTG 1 cut(s) 1160
PsuI RGATCY 1 cut(s) 985
PvuII CAGCTG 2 cut(s) 557, 772
RsaI GTAC 2 cut(s) 158, 790
RsaNI GTAC 2 cut(s) 157, 789
RseI CAYNNNNRTG 2 cut(s) 63, 669
Sau3AI GATC 3 cut(s) 559, 601, 985
Sau96I GGNCC 1 cut(s) 363
SchI GAGTC 5 cut(s) 174, 188, 518, 971, 1346
ScrFI CCNGG 6 cut(s) 449, 450, 681, 786, 930, 978
SduI GDGCHC 3 cut(s) 51, 730, 973
SexAI ACCWGGT 2 cut(s) 679, 928
SfaNI GCATC 2 cut(s) 1319, 1336
SinI GGWCC 1 cut(s) 363
SmaI CCCGGG 1 cut(s) 450
SmiMI CAYNNNNRTG 2 cut(s) 63, 669
SmlI CTYRAG 3 cut(s) 594, 740, 1247
SmoI CTYRAG 3 cut(s) 594, 740, 1247
SphI GCATGC 1 cut(s) 1313
Sse9I AATT 6 cut(s) 170, 811, 1077, 1126, 1143, 1229
SseBI AGGCCT 1 cut(s) 113
SsiI CCGC 5 cut(s) 124, 481, 746, 1059, 1349
SspI AATATT 2 cut(s) 1117, 1281
SspMI CTAG 4 cut(s) 165, 210, 734, 884
StuI AGGCCT 1 cut(s) 113
StyD4I CCNGG 6 cut(s) 447, 448, 679, 784, 928, 976
StyI CCWWGG 2 cut(s) 164, 209
TaaI ACNGT 3 cut(s) 257, 445, 905
TaiI ACGT 2 cut(s) 892, 1290
TaqI TCGA 2 cut(s) 328, 1167
TaqII GACCGA 1 cut(s) 334
TasI AATT 6 cut(s) 170, 811, 1077, 1126, 1143, 1229
TauI GCSGC 2 cut(s) 748, 1352
TfiI GAWTC 8 cut(s) 551, 590, 625, 992, 1091, 1171, 1192, 1211
TscAI CASTG 1 cut(s) 910
TseFI GTSAC 3 cut(s) 346, 794, 1005
TseI GCWGC 9 cut(s) 6, 40, 264, 523, 526, 608, 611, 827, 830
Tsp45I GTSAC 3 cut(s) 346, 794, 1005
TspDTI ATGAA 6 cut(s) 500, 564, 684, 933, 1068, 1200
TspGWI ACGGA 1 cut(s) 378
TspMI CCCGGG 1 cut(s) 448
TspRI CASTG 1 cut(s) 910
VpaK11BI GGWCC 1 cut(s) 363
XapI RAATTY 1 cut(s) 811
XceI RCATGY 1 cut(s) 1313
XmaI CCCGGG 1 cut(s) 448
XmaJI CCTAGG 2 cut(s) 164, 209
XmnI GAANNNNTTC 4 cut(s) 287, 864, 891, 1191
XspI CTAG 4 cut(s) 165, 210, 734, 884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.