Prupe.2G202400_v2.0.a1
NAC Family

(NAC) domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0007535
Physical Location & Seq
Reverse (-)
23864645 .. 23868096
3452 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G202400.3

Sequence Viewer

Length: 1365 bp
ATGTATGTCCAGGAAGAGACCTTGGTTGGGAAGCTCAGGACTTTTGGGATGAAACACAAGTCCAAAACCGCAGTGACAGTGCTGTGGCTTGTGGTTGCAGGAGGGATGAGAAGCACAACAACAGAAGAATGGTTGCTTCCCTTGCTGCGTGGATTCAGATTCCATCCCCCTGAGGAGGAAATGGTGAACCTTTTGAGGAAGAAGATGGAGGGCCAGGGCTCCCAAACCATGCCTGAAATCGATTACGAGCCTTGGAATTTACCTGATAATGAATCTATCTCACTTTTTCTTCGCTTCTTGAAGCAGATGATGCAGGGTAAGGCCTCCCAAGCCTGCCACATCATCCCTCAAATCGATGTCTGCAAGTACGAGCCTTCGGATTTAGCTGAGCTCTTGTTCCCAGACTCTCCATATCAACCTAGGATGTGGTTTTCCTTCAGCCGACCTCATTACAAATCCATCAACAGTCTTCGTTACAACAGGGCCACAAAGAAGGGATTCTGGAAAATCACAGGCAAGCCACGAGAAATCAAGTCTCAACAACTCTCCAAATCGGTCACTTGCAAAAAGAGGACCTTGACATTCCATGAAGGTCGTGTGTCTAAGTCGACGAAGACCGACTGGGTCATGCAGGAGTATTATCTCACTCAAACTGAACCGGGTTCTATTCCCAATCAGCTGAGTGACTTTGTTCTCTGCCGCATGAAGAATAAGTCAGCTCATTATGAGTCAAATAATAAAAAGCTGAAGGATGATTCAATCTGTGATGAATCAGCTGATCCTGGTATTGGTGGCTACATGGCCTCTAATTCTGAAGATGATCAAGCTCCTGCAAATAATATGATTCTGGAGGCCGATAGACATCTGGCTGACAAAGAGCTAGAACATGATCTGCCTGGAAGTGGCAATCATGATGCTGGTGAACCTGGTGGCTGTGTTTCATCTGATTGTGATGATATGGTTCAAGAGCTAAGTGCTCAGCCAGGAGAATATCTGGATTTACCTTTTCCTCCACCTGAGCCACCTGAGCCGGGAAATGCTTCTGTGCCATCTCCGATTGGGAATAATGATTCTTCTCTTCCAAATAAGAATAATATTACAACCAATTATGACAGTAAACCAGTTAGCAACACCGCCTCTAATTTCAAGAATCAAACTAAAGATGAAAGGACGTCAGAGGTTTATTCTCAACCAGAAGAAGATCCGGAATCATTCTTACAACTTAAGCTAGACGATTACACATGGCTTTCAAGAATATTGCAGCCAGAACAGGGAAATCTTCTGCATGCCAATAACTCTATTGGATGCAATGAGTTGCAATCTCCATATCCGGAGACTGCGGCTCTTTTCCCACAATCTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

455

Amino Acids

51.26

Weight (kDa)

5.25

Isoelectric Point (pI)

59.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1175
AccI GTMKAC 1 cut(s) 608
AccIII TCCGGA 2 cut(s) 1204, 1330
AciI CCGC 4 cut(s) 69, 700, 1134, 1340
AclWI GGATC 2 cut(s) 773, 1196
AcsI RAATTY 1 cut(s) 256
AcuI CTGAAG 3 cut(s) 421, 767, 834
AcyI GRCGYC 1 cut(s) 1172
AfaI GTAC 1 cut(s) 368
AfiI CCNNNNNNNGG 6 cut(s) 27, 175, 788, 902, 1031, 1271
AflII CTTAAG 1 cut(s) 1223
AgsI TTSAA 5 cut(s) 301, 759, 965, 1147, 1251
AjnI CCWGG 6 cut(s) 9, 213, 781, 895, 925, 982
Alw21I GWGCWC 2 cut(s) 393, 979
Alw26I GTCTC 3 cut(s) 11, 540, 1328
AlwI GGATC 2 cut(s) 773, 1196
Aor13HI TCCGGA 2 cut(s) 1204, 1330
AoxI GGCC 5 cut(s) 211, 321, 483, 801, 852
ApeKI GCWGC 2 cut(s) 145, 1261
ApoI RAATTY 1 cut(s) 256
Asp700I GAANNNNTTC 2 cut(s) 497, 1039
AspA2I CCTAGG 1 cut(s) 419
AspS9I GGNCC 3 cut(s) 211, 483, 573
AsuC2I CCSGG 2 cut(s) 660, 1032
AsuHPI GGTGA 2 cut(s) 196, 932
AvaII GGWCC 1 cut(s) 573
AvrII CCTAGG 1 cut(s) 419
AxyI CCTNAGG 1 cut(s) 171
BanII GRGCYC 2 cut(s) 221, 393
BauI CACGAG 1 cut(s) 522
BbsI GAAGAC 2 cut(s) 461, 620
Bbv12I GWGCWC 2 cut(s) 393, 979
BbvI GCAGC 2 cut(s) 132, 1273
BccI CCATC 4 cut(s) 171, 199, 467, 1057
BciT130I CCWGG 6 cut(s) 11, 215, 783, 897, 927, 984
BclI TGATCA 1 cut(s) 820
BcnI CCSGG 2 cut(s) 660, 1032
BcoDI GTCTC 3 cut(s) 11, 540, 1328
BfaI CTAG 3 cut(s) 420, 881, 1229
BfrI CTTAAG 1 cut(s) 1223
BisI GCNGC 4 cut(s) 146, 700, 1262, 1341
BlnI CCTAGG 1 cut(s) 419
BlpI GCTNAGC 2 cut(s) 387, 978
BlsI GCNGC 4 cut(s) 147, 701, 1263, 1342
Bme1390I CCNGG 8 cut(s) 11, 215, 660, 783, 897, 927, 984, 1032
Bme18I GGWCC 1 cut(s) 573
BmgT120I GGNCC 3 cut(s) 211, 483, 573
BmiI GGNNCC 1 cut(s) 220
BmrFI CCNGG 8 cut(s) 11, 215, 660, 783, 897, 927, 984, 1032
BmrI ACTGGG 1 cut(s) 631
BmsI GCATC 3 cut(s) 300, 904, 1295
BmuI ACTGGG 1 cut(s) 631
BpiI GAAGAC 2 cut(s) 461, 620
BpmI CTGGAG 1 cut(s) 869
Bpu10I CCTNAGC 3 cut(s) 35, 1017, 1026
Bpu1102I GCTNAGC 2 cut(s) 387, 978
BpuMI CCSGG 2 cut(s) 660, 1032
Bsa29I ATCGAT 2 cut(s) 240, 354
BsaBI GATNNNNATC 1 cut(s) 861
BsaHI GRCGYC 1 cut(s) 1172
BsaI GGTCTC 1 cut(s) 11
BsaJI CCNNGG 4 cut(s) 21, 214, 251, 419
BsaWI WCCGGW 2 cut(s) 1204, 1330
Bsc4I CCNNNNNNNGG 6 cut(s) 27, 175, 788, 902, 1031, 1271
Bse1I ACTGG 2 cut(s) 626, 1121
Bse21I CCTNAGG 1 cut(s) 171
Bse3DI GCAATG 1 cut(s) 1315
Bse8I GATNNNNATC 1 cut(s) 861
BseAI TCCGGA 2 cut(s) 1204, 1330
BseBI CCWGG 6 cut(s) 11, 215, 783, 897, 927, 984
BseCI ATCGAT 2 cut(s) 240, 354
BseDI CCNNGG 4 cut(s) 21, 214, 251, 419
BseGI GGATG 7 cut(s) 54, 111, 163, 342, 429, 757, 1310
BseJI GATNNNNATC 1 cut(s) 861
BseLI CCNNNNNNNGG 6 cut(s) 27, 175, 788, 902, 1031, 1271
BseMI GCAATG 1 cut(s) 1315
BseMII CTCAG 7 cut(s) 49, 162, 378, 671, 992, 1008, 1017
BseNI ACTGG 2 cut(s) 626, 1121
BseRI GAGGAG 1 cut(s) 188
BseXI GCAGC 2 cut(s) 132, 1273
BshFI GGCC 5 cut(s) 213, 323, 485, 803, 854
BshVI ATCGAT 2 cut(s) 240, 354
BsiHKAI GWGCWC 2 cut(s) 393, 979
BsiSI CCGG 4 cut(s) 659, 1031, 1205, 1331
BslI CCNNNNNNNGG 6 cut(s) 27, 175, 788, 902, 1031, 1271
BsmAI GTCTC 3 cut(s) 11, 540, 1328
BsnI GGCC 5 cut(s) 213, 323, 485, 803, 854
Bso31I GGTCTC 1 cut(s) 11
Bsp1286I GDGCHC 3 cut(s) 221, 393, 979
Bsp13I TCCGGA 2 cut(s) 1204, 1330
Bsp143I GATC 4 cut(s) 778, 820, 889, 1201
Bsp1720I GCTNAGC 2 cut(s) 387, 978
BspACI CCGC 4 cut(s) 69, 700, 1134, 1340
BspANI GGCC 5 cut(s) 213, 323, 485, 803, 854
BspCNI CTCAG 7 cut(s) 48, 163, 379, 672, 991, 1009, 1018
BspDI ATCGAT 2 cut(s) 240, 354
BspEI TCCGGA 2 cut(s) 1204, 1330
BspHI TCATGA 1 cut(s) 910
BspLI GGNNCC 1 cut(s) 220
BspPI GGATC 2 cut(s) 773, 1196
BspTI CTTAAG 1 cut(s) 1223
BspTNI GGTCTC 1 cut(s) 11
BsrDI GCAATG 1 cut(s) 1315
BsrI ACTGG 2 cut(s) 626, 1121
BssECI CCNNGG 4 cut(s) 21, 214, 251, 419
BssMI GATC 4 cut(s) 778, 820, 889, 1201
BssNI GRCGYC 1 cut(s) 1172
BssSI CACGAG 1 cut(s) 522
BssT1I CCWWGG 3 cut(s) 21, 251, 419
Bst2BI CACGAG 1 cut(s) 522
Bst2UI CCWGG 6 cut(s) 11, 215, 783, 897, 927, 984
Bst4CI ACNGT 3 cut(s) 79, 467, 1115
Bst6I CTCTTC 2 cut(s) 9, 1083
BstACI GRCGYC 1 cut(s) 1172
BstAFI CTTAAG 1 cut(s) 1223
BstAPI GCANNNNNTGC 1 cut(s) 310
BstC8I GCNNGC 3 cut(s) 334, 518, 1287
BstDEI CTNAG 9 cut(s) 35, 171, 387, 603, 680, 971, 978, 1017, 1026
BstF5I GGATG 7 cut(s) 54, 111, 163, 342, 429, 757, 1310
BstKTI GATC 4 cut(s) 781, 823, 892, 1204
BstMAI GTCTC 3 cut(s) 11, 540, 1328
BstMBI GATC 4 cut(s) 778, 820, 889, 1201
BstMWI GCNNNNNNNGC 4 cut(s) 142, 310, 329, 1027
BstNI CCWGG 6 cut(s) 11, 215, 783, 897, 927, 984
BstNSI RCATGY 1 cut(s) 1289
BstSCI CCNGG 8 cut(s) 9, 213, 658, 781, 895, 925, 982, 1030
BstV1I GCAGC 2 cut(s) 132, 1273
BstV2I GAAGAC 2 cut(s) 461, 620
BstX2I RGATCY 1 cut(s) 1201
BstYI RGATCY 1 cut(s) 1201
Bsu15I ATCGAT 2 cut(s) 240, 354
Bsu36I CCTNAGG 1 cut(s) 171
BsuRI GGCC 5 cut(s) 213, 323, 485, 803, 854
BsuTUI ATCGAT 2 cut(s) 240, 354
BtsCI GGATG 7 cut(s) 54, 111, 163, 342, 429, 757, 1310
BtsI GCAGTG 1 cut(s) 78
BtsIMutI CAGTG 2 cut(s) 78, 84
Cac8I GCNNGC 3 cut(s) 334, 518, 1287
CciI TCATGA 1 cut(s) 910
Cfr13I GGNCC 3 cut(s) 211, 483, 573
ClaI ATCGAT 2 cut(s) 240, 354
CsiI ACCWGGT 1 cut(s) 925
Csp6I GTAC 1 cut(s) 367
CviAII CATG 9 cut(s) 229, 587, 628, 703, 799, 887, 911, 1242, 1286
CviQI GTAC 1 cut(s) 367
DdeI CTNAG 9 cut(s) 35, 171, 387, 603, 680, 971, 978, 1017, 1026
DpnI GATC 4 cut(s) 780, 822, 891, 1203
DpnII GATC 4 cut(s) 778, 820, 889, 1201
Eam1104I CTCTTC 2 cut(s) 9, 1083
EarI CTCTTC 2 cut(s) 9, 1083
Ecl136II GAGCTC 1 cut(s) 391
Eco130I CCWWGG 3 cut(s) 21, 251, 419
Eco147I AGGCCT 1 cut(s) 323
Eco24I GRGCYC 2 cut(s) 221, 393
Eco31I GGTCTC 1 cut(s) 11
Eco47I GGWCC 1 cut(s) 573
Eco53kI GAGCTC 1 cut(s) 391
Eco57I CTGAAG 3 cut(s) 421, 767, 834
Eco81I CCTNAGG 1 cut(s) 171
EcoICRI GAGCTC 1 cut(s) 391
EcoO109I RGGNCCY 1 cut(s) 573
EcoRII CCWGG 6 cut(s) 9, 213, 781, 895, 925, 982
EcoT14I CCWWGG 3 cut(s) 21, 251, 419
EcoT38I GRGCYC 2 cut(s) 221, 393
ErhI CCWWGG 3 cut(s) 21, 251, 419
FaeI CATG 9 cut(s) 232, 590, 631, 706, 802, 890, 914, 1245, 1289
FalI AAGNNNNNCTT 2 cut(s) 560, 592
FatI CATG 9 cut(s) 228, 586, 627, 702, 798, 886, 910, 1241, 1285
FbaI TGATCA 1 cut(s) 820
FblI GTMKAC 1 cut(s) 608
Fnu4HI GCNGC 4 cut(s) 146, 700, 1262, 1341
FokI GGATG 7 cut(s) 61, 118, 150, 329, 436, 764, 1317
FriOI GRGCYC 2 cut(s) 221, 393
Fsp4HI GCNGC 4 cut(s) 146, 700, 1262, 1341
FspBI CTAG 3 cut(s) 420, 881, 1229
GluI GCNGC 4 cut(s) 146, 700, 1262, 1341
GsuI CTGGAG 1 cut(s) 869
HaeIII GGCC 5 cut(s) 213, 323, 485, 803, 854
HapII CCGG 4 cut(s) 659, 1031, 1205, 1331
Hin1I GRCGYC 1 cut(s) 1172
Hin1II CATG 9 cut(s) 232, 590, 631, 706, 802, 890, 914, 1245, 1289
HincII GTYRAC 1 cut(s) 609
HindII GTYRAC 1 cut(s) 609
HpaII CCGG 4 cut(s) 659, 1031, 1205, 1331
HphI GGTGA 2 cut(s) 196, 932
Hpy166II GTNNAC 4 cut(s) 187, 609, 923, 1118
Hpy188I TCNGA 6 cut(s) 158, 379, 814, 946, 1056, 1177
Hpy8I GTNNAC 4 cut(s) 187, 609, 923, 1118
Hpy99I CGWCG 1 cut(s) 613
HpyAV CCTTC 5 cut(s) 384, 445, 487, 584, 742
HpyCH4III ACNGT 3 cut(s) 79, 467, 1115
HpyCH4IV ACGT 1 cut(s) 1172
HpyF10VI GCNNNNNNNGC 4 cut(s) 142, 310, 329, 1027
HpyF3I CTNAG 9 cut(s) 35, 171, 387, 603, 680, 971, 978, 1017, 1026
HpySE526I ACGT 1 cut(s) 1172
Hsp92I GRCGYC 1 cut(s) 1172
Hsp92II CATG 9 cut(s) 232, 590, 631, 706, 802, 890, 914, 1245, 1289
Kpn2I TCCGGA 2 cut(s) 1204, 1330
Ksp22I TGATCA 1 cut(s) 820
Kzo9I GATC 4 cut(s) 778, 820, 889, 1201
LmnI GCTCC 2 cut(s) 224, 832
Lsp1109I GCAGC 2 cut(s) 132, 1273
LweI GCATC 3 cut(s) 300, 904, 1295
MabI ACCWGGT 1 cut(s) 925
MaeI CTAG 3 cut(s) 420, 881, 1229
MaeII ACGT 1 cut(s) 1172
MaeIII GTNAC 4 cut(s) 73, 473, 556, 683
MalI GATC 4 cut(s) 780, 822, 891, 1203
MboI GATC 4 cut(s) 778, 820, 889, 1201
MflI RGATCY 1 cut(s) 1201
MhlI GDGCHC 3 cut(s) 221, 393, 979
MluCI AATT 4 cut(s) 256, 808, 1105, 1141
MlyI GAGTC 2 cut(s) 398, 737
MroI TCCGGA 2 cut(s) 1204, 1330
MroXI GAANNNNTTC 2 cut(s) 497, 1039
MseI TTAA 1 cut(s) 1224
MspA1I CMGCKG 2 cut(s) 679, 776
MspCI CTTAAG 1 cut(s) 1223
MspI CCGG 4 cut(s) 659, 1031, 1205, 1331
MspR9I CCNGG 8 cut(s) 11, 215, 660, 783, 897, 927, 984, 1032
MvaI CCWGG 6 cut(s) 11, 215, 783, 897, 927, 984
MwoI GCNNNNNNNGC 4 cut(s) 142, 310, 329, 1027
NciI CCSGG 2 cut(s) 660, 1032
NdeII GATC 4 cut(s) 778, 820, 889, 1201
NlaIII CATG 9 cut(s) 232, 590, 631, 706, 802, 890, 914, 1245, 1289
NlaIV GGNNCC 1 cut(s) 220
NmuCI GTSAC 3 cut(s) 73, 556, 683
NspI RCATGY 1 cut(s) 1289
PaeI GCATGC 1 cut(s) 1289
PagI TCATGA 1 cut(s) 910
PceI AGGCCT 1 cut(s) 323
PdmI GAANNNNTTC 2 cut(s) 497, 1039
PflFI GACNNNGTC 1 cut(s) 623
PfoI TCCNGGA 1 cut(s) 9
PkrI GCNGC 4 cut(s) 147, 701, 1263, 1342
PleI GAGTC 2 cut(s) 398, 736
PpsI GAGTC 2 cut(s) 398, 736
PpuMI RGGWCCY 1 cut(s) 573
Psp124BI GAGCTC 1 cut(s) 393
Psp5II RGGWCCY 1 cut(s) 573
Psp6I CCWGG 6 cut(s) 9, 213, 781, 895, 925, 982
PspGI CCWGG 6 cut(s) 9, 213, 781, 895, 925, 982
PspN4I GGNNCC 1 cut(s) 220
PspPI GGNCC 3 cut(s) 211, 483, 573
PspPPI RGGWCCY 1 cut(s) 573
PsuI RGATCY 1 cut(s) 1201
PsyI GACNNNGTC 1 cut(s) 623
PvuII CAGCTG 2 cut(s) 679, 776
RsaI GTAC 1 cut(s) 368
RsaNI GTAC 1 cut(s) 367
SacI GAGCTC 1 cut(s) 393
SalI GTCGAC 1 cut(s) 607
SaqAI TTAA 1 cut(s) 1224
SatI GCNGC 4 cut(s) 146, 700, 1262, 1341
Sau3AI GATC 4 cut(s) 778, 820, 889, 1201
Sau96I GGNCC 3 cut(s) 211, 483, 573
SchI GAGTC 2 cut(s) 398, 737
ScrFI CCNGG 8 cut(s) 11, 215, 660, 783, 897, 927, 984, 1032
SduI GDGCHC 3 cut(s) 221, 393, 979
SexAI ACCWGGT 1 cut(s) 925
SfaNI GCATC 3 cut(s) 300, 904, 1295
SinI GGWCC 1 cut(s) 573
SmlI CTYRAG 1 cut(s) 1223
SmoI CTYRAG 1 cut(s) 1223
SphI GCATGC 1 cut(s) 1289
Sse9I AATT 4 cut(s) 256, 808, 1105, 1141
SseBI AGGCCT 1 cut(s) 323
SsiI CCGC 4 cut(s) 69, 700, 1134, 1340
SspI AATATT 2 cut(s) 1096, 1257
SspMI CTAG 3 cut(s) 420, 881, 1229
SstI GAGCTC 1 cut(s) 393
StuI AGGCCT 1 cut(s) 323
StyD4I CCNGG 8 cut(s) 9, 213, 658, 781, 895, 925, 982, 1030
StyI CCWWGG 3 cut(s) 21, 251, 419
TaaI ACNGT 3 cut(s) 79, 467, 1115
TaiI ACGT 1 cut(s) 1175
TaqI TCGA 3 cut(s) 240, 354, 608
TaqII GACCGA 2 cut(s) 544, 632
TasI AATT 4 cut(s) 256, 808, 1105, 1141
TauI GCSGC 2 cut(s) 702, 1343
Tru1I TTAA 1 cut(s) 1224
Tru9I TTAA 1 cut(s) 1224
TscAI CASTG 2 cut(s) 78, 84
TseFI GTSAC 3 cut(s) 73, 556, 683
TseI GCWGC 2 cut(s) 145, 1261
Tsp45I GTSAC 3 cut(s) 73, 556, 683
TspDTI ATGAA 7 cut(s) 65, 285, 603, 719, 783, 930, 1179
TspRI CASTG 2 cut(s) 78, 84
Tth111I GACNNNGTC 1 cut(s) 623
Vha464I CTTAAG 1 cut(s) 1223
VpaK11BI GGWCC 1 cut(s) 573
XapI RAATTY 1 cut(s) 256
XceI RCATGY 1 cut(s) 1289
XmaJI CCTAGG 1 cut(s) 419
XmiI GTMKAC 1 cut(s) 608
XmnI GAANNNNTTC 2 cut(s) 497, 1039
XspI CTAG 3 cut(s) 420, 881, 1229
ZraI GACGTC 1 cut(s) 1173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.