pycom07g15800
NAC Family

(NAC) domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0007535
Physical Location & Seq
Reverse (-)
18339495 .. 18341366
1872 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g15800.4

Sequence Viewer

Length: 1479 bp
ATGTTTGCTGATTCTGCTTTTCAAGCTAAGGCGTGGTACTCCTTCAGCCTGTGTGATTACAAATACACAAATAGTCTTCGCTGCAACAGAGTCACAAAGCATGGCTTCTGGAAGATCACAGGCAAGCCGCAGGATATCAGCTCAAAATACTTCACTTGCAAAAAGAGGACATTAACCTTCCAAACCAAGACCTTCGAAGAAGGTGGGGCGTCTAAATTCGGTTCTAGTCCCTGTCAGGAGAGGGATGTGAAGAGGGACTATGCTCTCTGCCTCCTGAAGTATAAGCCGGTTTATTCTAAGTCTGATAAAAAGAAGCCTGAGGGAACATCGGTCTGTGATGATTTAGCTGATCTTGGTAATTGTGGCTACATTGCCTCTAGTCCCGGAGATGATCACGCCGCTTCTGCTGCTGCAATGAATCATATGACTCCAGATACAGAAGTTTTGACATATAAAGAGCTAGAAGATGATCTACTTGGCAATGGAAATCATGACCATGGTGAACCTGGTGGCGGCGTCTCATCTGATTCTATTGATCAAGCTCTACGTGACATGATTCATGAGGTTTGGTTTTATGTCCCCTCACATACTCTGCTAGGAGGATATCTGGATTCACCCTTTCCTCCTCCCGAGACACCTCAGCTGCATCAACCACCTCACCTTGGAAATGCTCCTGATATCTATAGTCATGAATTACTTGATCCTGGCACTGGTGGCTGCATCACCTATAATACTAATAACCAAGCTGCTGCCATGAATCATATGATTCCCGTCACTGAAGAAATTCTGGCACACAAACAGCTAGATAGTTGTGTGTTTGGCAGTGGCGATCATGATGTTGGTGAACTTGGTAGCAGCATTTCATCTGATTTTAATAATCCAGCTGTAGATGATATGATTCTTGACGTAAGTACGAATACACGTTTTAAACATTCTGATGTGAACTTGGTCATACGAATTACAAGACGTATATCTAATTTAACAATTGGCTTTTTTTTTTTTGTGAATCTTATAATATGGCAGTGTTGTTGTCAGCTAGGAAAAGAATTGGATTCACCCTTATCTCCTCCCGAGCCACCTCAGCCACATCAGCCACATAGGCCACACCAGCTGGGAAATGTTCTGGACATTCATAGTAGCAAATTCAGTCACTGGACATCTCCAATTGGGGATAATGATTCGTATGTTACTAATACAAATAACATTGCAACCAATTATGACAACGAACCAGTTATGAACATCGCTTATAATTCTAAAAATCACGCTACAAACGAATGGATTTCCGAGGTTTATTCTCAGGCAGAAGAAAATTGGGGATCAACTTTTCAACCGTTTGATCAGCTACAGAATTACAGATTGCAGTCACCAATATTGTTCTCAAAACCGGGAGAGCTTCTGCATGCCAATAACTATATTGGATGCATTGAGTTGCAATCTTTAGCTATGGAGATTGCAACTCTTTCTCCACAAAGTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

493

Amino Acids

54.76

Weight (kDa)

5.25

Isoelectric Point (pI)

45.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1013, 1248
AciI CCGC 3 cut(s) 128, 399, 513
AclWI GGATC 2 cut(s) 695, 1324
AcsI RAATTY 3 cut(s) 215, 783, 1142
AcuI CTGAAG 3 cut(s) 28, 296, 798
AcyI GRCGYC 2 cut(s) 209, 516
AfaI GTAC 2 cut(s) 38, 913
AfiI CCNNNNNNNGG 3 cut(s) 512, 662, 710
AflIII ACRYGT 1 cut(s) 920
AgsI TTSAA 2 cut(s) 23, 1328
AjnI CCWGG 2 cut(s) 505, 703
Alw26I GTCTC 2 cut(s) 523, 626
AlwI GGATC 2 cut(s) 695, 1324
AlwNI CAGNNNCTG 1 cut(s) 1152
Ama87I CYCGRG 2 cut(s) 629, 1070
AoxI GGCC 1 cut(s) 1100
ApeKI GCWGC 8 cut(s) 81, 407, 410, 643, 717, 746, 749, 855
ApoI RAATTY 3 cut(s) 215, 783, 1142
Asp700I GAANNNNTTC 1 cut(s) 783
AsuC2I CCSGG 2 cut(s) 384, 1386
AsuHPI GGTGA 7 cut(s) 512, 606, 650, 715, 854, 1047, 1356
AsuII TTCGAA 1 cut(s) 195
AvaI CYCGRG 2 cut(s) 629, 1070
AxyI CCTNAGG 1 cut(s) 318
BaeI ACNNNNGTAYC 2 cut(s) 426, 459
BarI GAAGNNNNNNTAC 2 cut(s) 456, 488
BbsI GAAGAC 1 cut(s) 68
BbvCI CCTCAGC 2 cut(s) 639, 1080
BbvI GCAGC 8 cut(s) 68, 394, 397, 630, 704, 733, 736, 867
BciT130I CCWGG 2 cut(s) 507, 705
BclI TGATCA 3 cut(s) 391, 535, 1336
BcnI CCSGG 2 cut(s) 384, 1386
BcoDI GTCTC 2 cut(s) 523, 626
BfaI CTAG 6 cut(s) 225, 378, 461, 596, 803, 1037
BfmI CTRYAG 3 cut(s) 682, 885, 1343
BglI GCCNNNNNGGC 1 cut(s) 1099
Bme1390I CCNGG 4 cut(s) 384, 507, 705, 1386
BmeT110I CYCGRG 2 cut(s) 629, 1070
BmrFI CCNGG 4 cut(s) 384, 507, 705, 1386
BmsI GCATC 3 cut(s) 655, 729, 1409
BpiI GAAGAC 1 cut(s) 68
BpmI CTGGAG 1 cut(s) 414
Bpu10I CCTNAGC 3 cut(s) 27, 639, 1080
Bpu14I TTCGAA 1 cut(s) 195
BpuMI CCSGG 2 cut(s) 384, 1386
BsaAI YACGTR 1 cut(s) 548
BsaHI GRCGYC 2 cut(s) 209, 516
BsaJI CCNNGG 3 cut(s) 496, 661, 1284
BsaXI ACNNNNNCTCC 2 cut(s) 1447, 1477
Bsc4I CCNNNNNNNGG 3 cut(s) 512, 662, 710
Bse118I RCCGGY 1 cut(s) 286
Bse1I ACTGG 3 cut(s) 715, 1157, 1229
Bse21I CCTNAGG 1 cut(s) 318
Bse3DI GCAATG 4 cut(s) 369, 420, 487, 1203
BseBI CCWGG 2 cut(s) 507, 705
BseDI CCNNGG 3 cut(s) 496, 661, 1284
BseGI GGATG 2 cut(s) 250, 1424
BseLI CCNNNNNNNGG 3 cut(s) 512, 662, 710
BseMI GCAATG 4 cut(s) 369, 420, 487, 1203
BseMII CTCAG 4 cut(s) 309, 653, 1094, 1310
BseNI ACTGG 3 cut(s) 715, 1157, 1229
BseRI GAGGAG 2 cut(s) 615, 1056
BseXI GCAGC 8 cut(s) 68, 394, 397, 630, 704, 733, 736, 867
BseYI CCCAGC 1 cut(s) 1111
BshFI GGCC 1 cut(s) 1102
BsiHKCI CYCGRG 2 cut(s) 629, 1070
BsiSI CCGG 3 cut(s) 287, 384, 1385
BslFI GGGAC 4 cut(s) 213, 269, 366, 563
BslI CCNNNNNNNGG 3 cut(s) 512, 662, 710
BsmAI GTCTC 2 cut(s) 523, 626
BsmBI CGTCTC 1 cut(s) 523
BsmFI GGGAC 4 cut(s) 213, 269, 366, 563
BsnI GGCC 1 cut(s) 1102
BsoBI CYCGRG 2 cut(s) 629, 1070
Bsp119I TTCGAA 1 cut(s) 195
Bsp143I GATC 9 cut(s) 114, 349, 391, 469, 535, 700, 829, 1316, 1336
Bsp19I CCATGG 1 cut(s) 496
BspACI CCGC 3 cut(s) 128, 399, 513
BspANI GGCC 1 cut(s) 1102
BspCNI CTCAG 4 cut(s) 310, 652, 1093, 1309
BspHI TCATGA 4 cut(s) 490, 559, 688, 832
BspPI GGATC 2 cut(s) 695, 1324
BspT104I TTCGAA 1 cut(s) 195
BsrDI GCAATG 4 cut(s) 369, 420, 487, 1203
BsrFI RCCGGY 1 cut(s) 286
BsrI ACTGG 3 cut(s) 715, 1157, 1229
BssAI RCCGGY 1 cut(s) 286
BssECI CCNNGG 3 cut(s) 496, 661, 1284
BssMI GATC 9 cut(s) 114, 349, 391, 469, 535, 700, 829, 1316, 1336
BssNI GRCGYC 2 cut(s) 209, 516
BssT1I CCWWGG 2 cut(s) 496, 661
Bst2UI CCWGG 2 cut(s) 507, 705
Bst4CI ACNGT 1 cut(s) 1332
Bst6I CTCTTC 1 cut(s) 245
BstACI GRCGYC 2 cut(s) 209, 516
BstBAI YACGTR 1 cut(s) 548
BstBI TTCGAA 1 cut(s) 195
BstC8I GCNNGC 2 cut(s) 125, 1401
BstDEI CTNAG 6 cut(s) 27, 297, 318, 639, 1080, 1296
BstDSI CCRYGG 1 cut(s) 496
BstF5I GGATG 2 cut(s) 250, 1424
BstKTI GATC 9 cut(s) 117, 352, 394, 472, 538, 703, 832, 1319, 1339
BstMAI GTCTC 2 cut(s) 523, 626
BstMBI GATC 9 cut(s) 114, 349, 391, 469, 535, 700, 829, 1316, 1336
BstMWI GCNNNNNNNGC 9 cut(s) 14, 23, 404, 407, 714, 1081, 1090, 1099, 1108
BstNI CCWGG 2 cut(s) 507, 705
BstNSI RCATGY 1 cut(s) 1403
BstSCI CCNGG 4 cut(s) 382, 505, 703, 1384
BstSFI CTRYAG 3 cut(s) 682, 885, 1343
BstV1I GCAGC 8 cut(s) 68, 394, 397, 630, 704, 733, 736, 867
BstV2I GAAGAC 1 cut(s) 68
Bsu36I CCTNAGG 1 cut(s) 318
BsuRI GGCC 1 cut(s) 1102
BtgI CCRYGG 1 cut(s) 496
BtgZI GCGATG 1 cut(s) 1225
BtsCI GGATG 2 cut(s) 250, 1424
BtsI GCAGTG 2 cut(s) 829, 1028
BtsIMutI CAGTG 5 cut(s) 708, 774, 829, 1028, 1150
Cac8I GCNNGC 2 cut(s) 125, 1401
CaiI CAGNNNCTG 1 cut(s) 1152
CciI TCATGA 4 cut(s) 490, 559, 688, 832
Cfr10I RCCGGY 1 cut(s) 286
CseI GACGC 2 cut(s) 198, 505
CsiI ACCWGGT 1 cut(s) 505
Csp6I GTAC 2 cut(s) 37, 912
CviAII CATG 9 cut(s) 101, 491, 497, 553, 560, 689, 754, 833, 1400
CviQI GTAC 2 cut(s) 37, 912
DdeI CTNAG 6 cut(s) 27, 297, 318, 639, 1080, 1296
DpnI GATC 9 cut(s) 116, 351, 393, 471, 537, 702, 831, 1318, 1338
DpnII GATC 9 cut(s) 114, 349, 391, 469, 535, 700, 829, 1316, 1336
DraI TTTAAA 1 cut(s) 928
Eam1104I CTCTTC 1 cut(s) 245
EarI CTCTTC 1 cut(s) 245
Eco130I CCWWGG 2 cut(s) 496, 661
Eco32I GATATC 3 cut(s) 136, 605, 679
Eco57I CTGAAG 3 cut(s) 28, 296, 798
Eco81I CCTNAGG 1 cut(s) 318
Eco88I CYCGRG 2 cut(s) 629, 1070
EcoRII CCWGG 2 cut(s) 505, 703
EcoRV GATATC 3 cut(s) 136, 605, 679
EcoT14I CCWWGG 2 cut(s) 496, 661
EcoT22I ATGCAT 1 cut(s) 1424
ErhI CCWWGG 2 cut(s) 496, 661
Esp3I CGTCTC 1 cut(s) 523
FaeI CATG 9 cut(s) 104, 494, 500, 556, 563, 692, 757, 836, 1403
FalI AAGNNNNNCTT 2 cut(s) 89, 121
FaqI GGGAC 4 cut(s) 213, 269, 366, 563
FatI CATG 9 cut(s) 100, 490, 496, 552, 559, 688, 753, 832, 1399
FauNDI CATATG 2 cut(s) 423, 762
FbaI TGATCA 3 cut(s) 391, 535, 1336
FokI GGATG 2 cut(s) 257, 1431
FspBI CTAG 6 cut(s) 225, 378, 461, 596, 803, 1037
GsaI CCCAGC 1 cut(s) 1115
GsuI CTGGAG 1 cut(s) 414
HaeIII GGCC 1 cut(s) 1102
HapII CCGG 3 cut(s) 287, 384, 1385
HgaI GACGC 2 cut(s) 198, 505
Hin1I GRCGYC 2 cut(s) 209, 516
Hin1II CATG 9 cut(s) 104, 494, 500, 556, 563, 692, 757, 836, 1403
HpaII CCGG 3 cut(s) 287, 384, 1385
HphI GGTGA 7 cut(s) 512, 606, 650, 715, 854, 1047, 1356
Hpy166II GTNNAC 3 cut(s) 503, 845, 943
Hpy188I TCNGA 5 cut(s) 304, 526, 868, 937, 1285
Hpy8I GTNNAC 3 cut(s) 503, 845, 943
HpyAV CCTTC 4 cut(s) 52, 187, 194, 202
HpyCH4III ACNGT 1 cut(s) 1332
HpyCH4IV ACGT 4 cut(s) 547, 906, 922, 967
HpyF10VI GCNNNNNNNGC 9 cut(s) 14, 23, 404, 407, 714, 1081, 1090, 1099, 1108
HpyF3I CTNAG 6 cut(s) 27, 297, 318, 639, 1080, 1296
HpySE526I ACGT 4 cut(s) 547, 906, 922, 967
Hsp92I GRCGYC 2 cut(s) 209, 516
Hsp92II CATG 9 cut(s) 104, 494, 500, 556, 563, 692, 757, 836, 1403
Ksp22I TGATCA 3 cut(s) 391, 535, 1336
Kzo9I GATC 9 cut(s) 114, 349, 391, 469, 535, 700, 829, 1316, 1336
LmnI GCTCC 1 cut(s) 676
Lsp1109I GCAGC 8 cut(s) 68, 394, 397, 630, 704, 733, 736, 867
LweI GCATC 3 cut(s) 655, 729, 1409
MabI ACCWGGT 1 cut(s) 505
MaeI CTAG 6 cut(s) 225, 378, 461, 596, 803, 1037
MaeII ACGT 4 cut(s) 547, 906, 922, 967
MaeIII GTNAC 6 cut(s) 91, 548, 772, 1148, 1186, 1362
MalI GATC 9 cut(s) 116, 351, 393, 471, 537, 702, 831, 1318, 1338
MboI GATC 9 cut(s) 114, 349, 391, 469, 535, 700, 829, 1316, 1336
MboII GAAGA 7 cut(s) 68, 124, 209, 262, 476, 791, 1316
MfeI CAATTG 2 cut(s) 984, 1164
MlyI GAGTC 2 cut(s) 99, 421
Mph1103I ATGCAT 1 cut(s) 1424
MroXI GAANNNNTTC 1 cut(s) 783
MseI TTAA 4 cut(s) 173, 873, 927, 980
MslI CAYNNNNRTG 2 cut(s) 495, 936
MspA1I CMGCKG 3 cut(s) 643, 884, 1111
MspI CCGG 3 cut(s) 287, 384, 1385
MspR9I CCNGG 4 cut(s) 384, 507, 705, 1386
MunI CAATTG 2 cut(s) 984, 1164
MvaI CCWGG 2 cut(s) 507, 705
MwoI GCNNNNNNNGC 9 cut(s) 14, 23, 404, 407, 714, 1081, 1090, 1099, 1108
NciI CCSGG 2 cut(s) 384, 1386
NcoI CCATGG 1 cut(s) 496
NdeI CATATG 2 cut(s) 423, 762
NdeII GATC 9 cut(s) 114, 349, 391, 469, 535, 700, 829, 1316, 1336
NlaIII CATG 9 cut(s) 104, 494, 500, 556, 563, 692, 757, 836, 1403
NmuCI GTSAC 5 cut(s) 91, 548, 772, 1148, 1362
NsiI ATGCAT 1 cut(s) 1424
NspI RCATGY 1 cut(s) 1403
NspV TTCGAA 1 cut(s) 195
PaeI GCATGC 1 cut(s) 1403
PagI TCATGA 4 cut(s) 490, 559, 688, 832
PcsI WCGNNNNNNNCGW 1 cut(s) 1269
PdmI GAANNNNTTC 1 cut(s) 783
PfoI TCCNGGA 1 cut(s) 382
PleI GAGTC 2 cut(s) 98, 421
PpsI GAGTC 2 cut(s) 98, 421
Ppu21I YACGTR 1 cut(s) 548
PsiI TTATAA 2 cut(s) 1013, 1248
Psp6I CCWGG 2 cut(s) 505, 703
PspFI CCCAGC 1 cut(s) 1111
PspGI CCWGG 2 cut(s) 505, 703
PstNI CAGNNNCTG 1 cut(s) 1152
PvuII CAGCTG 3 cut(s) 643, 884, 1111
RsaI GTAC 2 cut(s) 38, 913
RsaNI GTAC 2 cut(s) 37, 912
RseI CAYNNNNRTG 2 cut(s) 495, 936
SaqAI TTAA 4 cut(s) 173, 873, 927, 980
Sau3AI GATC 9 cut(s) 114, 349, 391, 469, 535, 700, 829, 1316, 1336
SchI GAGTC 2 cut(s) 99, 421
ScrFI CCNGG 4 cut(s) 384, 507, 705, 1386
SexAI ACCWGGT 1 cut(s) 505
SfaNI GCATC 3 cut(s) 655, 729, 1409
SfcI CTRYAG 3 cut(s) 682, 885, 1343
SfuI TTCGAA 1 cut(s) 195
SmiMI CAYNNNNRTG 2 cut(s) 495, 936
SphI GCATGC 1 cut(s) 1403
SsiI CCGC 3 cut(s) 128, 399, 513
SspI AATATT 1 cut(s) 1371
SspMI CTAG 6 cut(s) 225, 378, 461, 596, 803, 1037
StyD4I CCNGG 4 cut(s) 382, 505, 703, 1384
StyI CCWWGG 2 cut(s) 496, 661
TaaI ACNGT 1 cut(s) 1332
TaiI ACGT 4 cut(s) 550, 909, 925, 970
TaqI TCGA 1 cut(s) 195
TaqII GACCGA 1 cut(s) 319
TauI GCSGC 3 cut(s) 130, 401, 516
Tru1I TTAA 4 cut(s) 173, 873, 927, 980
Tru9I TTAA 4 cut(s) 173, 873, 927, 980
TscAI CASTG 5 cut(s) 715, 781, 829, 1028, 1157
TseFI GTSAC 5 cut(s) 91, 548, 772, 1148, 1362
TseI GCWGC 8 cut(s) 81, 407, 410, 643, 717, 746, 749, 855
Tsp45I GTSAC 5 cut(s) 91, 548, 772, 1148, 1362
TspDTI ATGAA 7 cut(s) 431, 548, 705, 770, 852, 1121, 1250
TspRI CASTG 5 cut(s) 715, 781, 829, 1028, 1157
XapI RAATTY 3 cut(s) 215, 783, 1142
XceI RCATGY 1 cut(s) 1403
XcmI CCANNNNNNNNNTGG 1 cut(s) 503
XmnI GAANNNNTTC 1 cut(s) 783
XspI CTAG 6 cut(s) 225, 378, 461, 596, 803, 1037
Zsp2I ATGCAT 1 cut(s) 1424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.