Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0005544

Physical Location & Seq

Genomic Coordinates Reverse (-)

24028901 .. 24031521

Gene Structure 2621 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1165500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

ATGGCATGGCCAAGTGTTCCTGCAGCTCTTCTCATATTCTTTGCCCTAGCAGTTTCTGCTGAGGATATATTTCTTGACTGGCACGTCACACTTGACACAAGTATCAAACCGGCATCTGTCGACCAACCTGTTATCGCCATCAACGGGCAGTTTCCGGGGCCGCTAATCAATGGCACAACCAATGATATGTTTCATATCAATGTGTTTAATGAAATGGATGAACCGCTGCTCATAACTTGGTGTGGCCAAATATCGAATGGCATACAACAAAGACTAAACTCTTGGCAAGATGGGGTATCAGGCACAAACTGTCCTATTCTTCCTGGCAACAACTGGACTTACATGTTCCAGTTCAAGGATCAAATTGGCACTTTTTCCTACTTCCCCTCACTCAAATTCCAGAAAGCTGGAGGAGCTTTTGGTCCGATTCGCGTCAATAATCGCGCAGTTATCCAAGTACCATTTCCGAAACCAGAAGCAGAATTTGATCTTCTCATTGGTGACTGGTACGAAAGAAGCTACAAGGAAGTTAGGTCCTTGATGAGCACCAAGACCATGGCCTACAACAGCACCCCTGATAAAATTTTGATGAATGGAAAAGGCGCGTATTTGGTACCTCCTACAGAAGGCCATGAGTCTTTAAATGTTACAAAGGGGAAGACTTACAGAATTAGGATATCAAATGTTGGGACTACATGGAGCTTCAATTTTAGGATTCAAAGTCACAGAATGGTTTTGGTTGAAACAGAAGGATCCTATACAAATAAAATTACATTGGACTCTCTTGATGTTCATGTTGGGCAGTCCTACTCTGTGCTTGTCACAGCTGACCAAACTGTTTCAGACTATTACATGATGGCAAGTCCTAAACTGTTCAATGCTACAGATGTGAGCAAATTTGGCATTGGTGTACTGCATTATGATAACTCCACCACACCTGCCAGTGGGCCTCTTCCAACTGGTCCTGACCCATTCGATCGAGAATTCTCCATCAATCAAGCTAAGTCCATTAGGTTGAACTTGACCACAGGGGCTGCAAGGCCTAATCCGCAAGGATCCTTCAATGTACATAATGTGACATTGTCACAGACATTCATATTGCATTCATCCACTGCAGAGATTTTTGGTTTACCTCAGTTTACAGTCAACAATGTGTCTTACTTGGCCCCAGACACACCACTAAAGTTGGCTGATCAGTTTCTCAATGGGTCGGGAATTTACGATCTTGATAAATTTTCTACCAACTCTTCAAATGTTGAATCCGTACGTGGAGTTTTTGTTGCCACGGGGACCCATAAAGGGTGGATAGAACTTGTTTTCCAGAATGATTTGGAGGACATGGATGCTTGGCACTTGGATGGATTTGGATTCTTTGTTGTTGGTTTTGGAGCTGGAAAATGGAAGCCTGAGTCGCGCTCTACTTACAACCTTTATGATCCAGTCGTGCGATCTACTGTGCAAGTGTACCCTGGCGAATGGAGTGCAGTTTATGCATACCTTGACAACCCAGGAATGTGGAATTTGAGGTCACAACACCTGAAAAATTGGTATTTAGGGGAGGAGCTTTATGTGAGGGTGTATGATGCTGATCCCAACCCTGCCAAGGAAAGGCCTCCTCCATCTAACCTCCTTCTATGTGGTCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

549

Amino Acids

61.11

Weight (kDa)

5.41

Isoelectric Point (pI)

31.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	35 - 148	1.7e-32	Multicopper oxidase
Cu-oxidase	PF00394	164 - 309	1.3e-39	Multicopper oxidase
Cu-oxidase_2	PF07731	394 - 529	6.6e-28	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005544)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g18341 FvH4_7g18350
malus_domestica	MD01G1098800.v1.1 MD01G1099000.v1.1 MD07G1165500.v1.1 MD07G1165800.v1.1
prunus_persica	Prupe.2G205500_v2.0.a1 Prupe.2G205600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0362061 RchiOBHm_Chr1g0362091 RchiOBHm_Chr7g0206161
rosa_laevigata	RLG00000027672 RLG00000027676
rosa_multiflora	Rmu_co8403161.1_g000001 Rmu_sc0010614.1_g000004
rosa_roxburghii	Rroxscaffold_4G00294510 Rroxscaffold_4G00294540
rosa_rugosa	Rorug01G0293200 Rorug01G0293600
rosa_samantha	Rh1BG266700 Rh1BG267000 Rh1CG284800 Rh1CG285100 Rh1DG296700 Rh1DG297100 Rh7DG233000
rosa_wichuraiana	Rw1G027020 Rw1G027050 Rw7G019480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	946
AasI	GACNNNNNNGTC	1 cut(s)	83
Acc36I	ACCTGC	1 cut(s)	946
Acc65I	GGTACC	1 cut(s)	613
AccB1I	GGYRCC	1 cut(s)	613
AccI	GTMKAC	1 cut(s)	120
AccII	CGCG	4 cut(s)	432, 444, 605, 1414
AciI	CCGC	3 cut(s)	161, 224, 1049
AclWI	GGATC	7 cut(s)	366, 747, 760, 1050, 1063, 1430, 1583
AcoI	YGGCCR	2 cut(s)	8, 244
AcsI	RAATTY	8 cut(s)	395, 482, 582, 896, 983, 1215, 1232, 1519
AfaI	GTAC	7 cut(s)	459, 509, 615, 912, 1068, 1266, 1466
AfiI	CCNNNNNNNGG	7 cut(s)	144, 355, 626, 944, 1299, 1603, 1608
AflIII	ACRYGT	1 cut(s)	342
AgsI	TTSAA	9 cut(s)	355, 706, 719, 743, 877, 1018, 1063, 1251, 1259
AjiI	CACGTC	1 cut(s)	85
AjnI	CCWGG	3 cut(s)	322, 1468, 1507
AjuI	GAANNNNNNNTTGG	2 cut(s)	447, 479
AloI	GAACNNNNNNTCC	2 cut(s)	1302, 1334
AluBI	AGCT	9 cut(s)	26, 407, 416, 519, 702, 827, 1001, 1391, 1564
AluI	AGCT	9 cut(s)	26, 407, 416, 519, 702, 827, 1001, 1391, 1564
Alw21I	GWGCWC	1 cut(s)	548
AlwI	GGATC	7 cut(s)	366, 747, 760, 1050, 1063, 1430, 1583
AlwNI	CAGNNNCTG	2 cut(s)	56, 1034
AoxI	GGCC	9 cut(s)	8, 158, 244, 558, 628, 947, 1040, 1164, 1610
ApeKI	GCWGC	3 cut(s)	23, 226, 1034
ApoI	RAATTY	8 cut(s)	395, 482, 582, 896, 983, 1215, 1232, 1519
Asp718I	GGTACC	1 cut(s)	613
AspLEI	GCGC	3 cut(s)	446, 605, 1416
AspS9I	GGNCC	7 cut(s)	158, 422, 534, 947, 962, 1165, 1290
AsuC2I	CCSGG	1 cut(s)	156
AsuHPI	GGTGA	1 cut(s)	512
AvaII	GGWCC	4 cut(s)	422, 534, 962, 1290
BaeI	ACNNNNGTAYC	2 cut(s)	85, 118
BalI	TGGCCA	2 cut(s)	10, 246
BamHI	GGATCC	2 cut(s)	752, 1055
BanI	GGYRCC	1 cut(s)	613
BbsI	GAAGAC	1 cut(s)	665
Bbv12I	GWGCWC	1 cut(s)	548
BbvCI	CCTCAGC	1 cut(s)	60
BbvI	GCAGC	3 cut(s)	35, 213, 1021
BccI	CCATC	6 cut(s)	146, 284, 850, 998, 1352, 1627
BcgI	CGANNNNNNTGC	2 cut(s)	1463, 1497
BciT130I	CCWGG	3 cut(s)	324, 1470, 1509
BclI	TGATCA	1 cut(s)	1192
BcnI	CCSGG	1 cut(s)	156
BfaI	CTAG	1 cut(s)	47
BfmI	CTRYAG	4 cut(s)	21, 621, 882, 1113
BfuAI	ACCTGC	1 cut(s)	946
BisI	GCNGC	4 cut(s)	24, 161, 227, 1035
BlsI	GCNGC	4 cut(s)	25, 162, 228, 1036
Bme1390I	CCNGG	4 cut(s)	156, 324, 1470, 1509
Bme18I	GGWCC	4 cut(s)	422, 534, 962, 1290
BmgBI	CACGTC	1 cut(s)	85
BmgT120I	GGNCC	7 cut(s)	158, 422, 534, 947, 962, 1165, 1290
BmiI	GGNNCC	7 cut(s)	159, 615, 754, 1057, 1167, 1291, 1292
BmrFI	CCNGG	4 cut(s)	156, 324, 1470, 1509
BmsI	GCATC	3 cut(s)	122, 1333, 1573
BpiI	GAAGAC	1 cut(s)	665
BplI	GAGNNNNNCTC	2 cut(s)	1400, 1432
BpmI	CTGGAG	1 cut(s)	429
Bpu10I	CCTNAGC	1 cut(s)	60
BpuMI	CCSGG	1 cut(s)	156
BsaAI	YACGTR	1 cut(s)	1268
BsaBI	GATNNNNATC	1 cut(s)	1587
BsaJI	CCNNGG	6 cut(s)	155, 555, 1284, 1468, 1507, 1602
BsaXI	ACNNNNNCTCC	2 cut(s)	1263, 1293
Bsc4I	CCNNNNNNNGG	7 cut(s)	144, 355, 626, 944, 1299, 1603, 1608
Bse118I	RCCGGY	1 cut(s)	109
Bse1I	ACTGG	7 cut(s)	83, 338, 349, 509, 942, 964, 1439
Bse8I	GATNNNNATC	1 cut(s)	1587
BseBI	CCWGG	3 cut(s)	324, 1470, 1509
BseDI	CCNNGG	6 cut(s)	155, 555, 1284, 1468, 1507, 1602
BseGI	GGATG	4 cut(s)	223, 1106, 1348, 1363
BseJI	GATNNNNATC	1 cut(s)	1587
BseLI	CCNNNNNNNGG	7 cut(s)	144, 355, 626, 944, 1299, 1603, 1608
BseMII	CTCAG	3 cut(s)	51, 1148, 1398
BseNI	ACTGG	7 cut(s)	83, 338, 349, 509, 942, 964, 1439
BseRI	GAGGAG	3 cut(s)	426, 1574, 1605
BseXI	GCAGC	3 cut(s)	35, 213, 1021
BsgI	GTGCAG	1 cut(s)	1503
Bsh1236I	CGCG	4 cut(s)	432, 444, 605, 1414
Bsh1285I	CGRYCG	1 cut(s)	979
BshFI	GGCC	9 cut(s)	10, 160, 246, 560, 630, 949, 1042, 1166, 1612
BshNI	GGYRCC	1 cut(s)	613
BsiEI	CGRYCG	1 cut(s)	979
BsiHKAI	GWGCWC	1 cut(s)	548
BsiSI	CCGG	2 cut(s)	110, 155
BsiWI	CGTACG	1 cut(s)	1264
BslFI	GGGAC	2 cut(s)	703, 1303
BslI	CCNNNNNNNGG	7 cut(s)	144, 355, 626, 944, 1299, 1603, 1608
BsmFI	GGGAC	2 cut(s)	703, 1303
BsmI	GAATGC	1 cut(s)	1102
BsnI	GGCC	9 cut(s)	10, 160, 246, 560, 630, 949, 1042, 1166, 1612
Bsp1286I	GDGCHC	1 cut(s)	548
Bsp1407I	TGTACA	1 cut(s)	1066
Bsp19I	CCATGG	1 cut(s)	555
BspACI	CCGC	3 cut(s)	161, 224, 1049
BspANI	GGCC	9 cut(s)	10, 160, 246, 560, 630, 949, 1042, 1166, 1612
BspCNI	CTCAG	3 cut(s)	52, 1147, 1399
BspFNI	CGCG	4 cut(s)	432, 444, 605, 1414
BspLI	GGNNCC	7 cut(s)	159, 615, 754, 1057, 1167, 1291, 1292
BspMAI	CTGCAG	2 cut(s)	25, 1117
BspMI	ACCTGC	1 cut(s)	946
BspPI	GGATC	7 cut(s)	366, 747, 760, 1050, 1063, 1430, 1583
BspQI	GCTCTTC	1 cut(s)	33
BspT107I	GGYRCC	1 cut(s)	613
BsrFI	RCCGGY	1 cut(s)	109
BsrGI	TGTACA	1 cut(s)	1066
BsrI	ACTGG	7 cut(s)	83, 338, 349, 509, 942, 964, 1439
BssAI	RCCGGY	1 cut(s)	109
BssECI	CCNNGG	6 cut(s)	155, 555, 1284, 1468, 1507, 1602
BssT1I	CCWWGG	2 cut(s)	555, 1602
Bst2UI	CCWGG	3 cut(s)	324, 1470, 1509
Bst4CI	ACNGT	5 cut(s)	311, 838, 873, 1144, 1456
Bst6I	CTCTTC	3 cut(s)	33, 957, 1252
BstAPI	GCANNNNNTGC	2 cut(s)	56, 1490
BstAUI	TGTACA	1 cut(s)	1066
BstBAI	YACGTR	1 cut(s)	1268
BstDEI	CTNAG	4 cut(s)	60, 1002, 1134, 1407
BstDSI	CCRYGG	2 cut(s)	555, 1284
BstENI	CCTNNNNNAGG	1 cut(s)	624
BstF5I	GGATG	4 cut(s)	223, 1106, 1348, 1363
BstFNI	CGCG	4 cut(s)	432, 444, 605, 1414
BstHHI	GCGC	3 cut(s)	446, 605, 1416
BstMCI	CGRYCG	1 cut(s)	979
BstMWI	GCNNNNNNNGC	6 cut(s)	56, 413, 900, 1048, 1411, 1490
BstNI	CCWGG	3 cut(s)	324, 1470, 1509
BstNSI	RCATGY	1 cut(s)	346
BstSCI	CCNGG	4 cut(s)	154, 322, 1468, 1507
BstSFI	CTRYAG	4 cut(s)	21, 621, 882, 1113
BstUI	CGCG	4 cut(s)	432, 444, 605, 1414
BstV1I	GCAGC	3 cut(s)	35, 213, 1021
BstV2I	GAAGAC	1 cut(s)	665
BstX2I	RGATCY	2 cut(s)	752, 1055
BstXI	CCANNNNNNTGG	3 cut(s)	407, 556, 1515
BstYI	RGATCY	2 cut(s)	752, 1055
BsuRI	GGCC	9 cut(s)	10, 160, 246, 560, 630, 949, 1042, 1166, 1612
BtgI	CCRYGG	2 cut(s)	555, 1284
BtrI	CACGTC	1 cut(s)	85
BtsCI	GGATG	4 cut(s)	223, 1106, 1348, 1363
BtsI	GCAGTG	1 cut(s)	1110
BtsIMutI	CAGTG	2 cut(s)	949, 1110
BveI	ACCTGC	1 cut(s)	946
CaiI	CAGNNNCTG	2 cut(s)	56, 1034
CfoI	GCGC	3 cut(s)	446, 605, 1416
Cfr10I	RCCGGY	1 cut(s)	109
Cfr13I	GGNCC	7 cut(s)	158, 422, 534, 947, 962, 1165, 1290
CseI	GACGC	1 cut(s)	421
Csp6I	GTAC	7 cut(s)	458, 508, 614, 911, 1067, 1265, 1465
CspCI	CAANNNNNGTGG	2 cut(s)	1167, 1202
CviAII	CATG	8 cut(s)	6, 343, 556, 632, 696, 794, 853, 1339
CviQI	GTAC	7 cut(s)	458, 508, 614, 911, 1067, 1265, 1465
DdeI	CTNAG	4 cut(s)	60, 1002, 1134, 1407
DraI	TTTAAA	1 cut(s)	642
DrdI	GACNNNNNNGTC	1 cut(s)	83
DseDI	GACNNNNNNGTC	1 cut(s)	83
EaeI	YGGCCR	2 cut(s)	8, 244
Eam1104I	CTCTTC	3 cut(s)	33, 957, 1252
EarI	CTCTTC	3 cut(s)	33, 957, 1252
Eco130I	CCWWGG	2 cut(s)	555, 1602
Eco147I	AGGCCT	2 cut(s)	1042, 1612
Eco32I	GATATC	1 cut(s)	678
Eco47I	GGWCC	4 cut(s)	422, 534, 962, 1290
EcoNI	CCTNNNNNAGG	1 cut(s)	624
EcoO109I	RGGNCCY	2 cut(s)	534, 1290
EcoRI	GAATTC	1 cut(s)	983
EcoRII	CCWGG	3 cut(s)	322, 1468, 1507
EcoRV	GATATC	1 cut(s)	678
EcoT14I	CCWWGG	2 cut(s)	555, 1602
EcoT22I	ATGCAT	1 cut(s)	1495
ErhI	CCWWGG	2 cut(s)	555, 1602
FaeI	CATG	8 cut(s)	9, 346, 559, 635, 699, 797, 856, 1342
FaqI	GGGAC	2 cut(s)	703, 1303
FatI	CATG	8 cut(s)	5, 342, 555, 631, 695, 793, 852, 1338
FbaI	TGATCA	1 cut(s)	1192
FblI	GTMKAC	1 cut(s)	120
Fnu4HI	GCNGC	4 cut(s)	24, 161, 227, 1035
FokI	GGATG	4 cut(s)	230, 1093, 1355, 1370
Fsp4HI	GCNGC	4 cut(s)	24, 161, 227, 1035
FspBI	CTAG	1 cut(s)	47
GlaI	GCGC	3 cut(s)	445, 604, 1415
GluI	GCNGC	4 cut(s)	24, 161, 227, 1035
GsuI	CTGGAG	1 cut(s)	429
HaeIII	GGCC	9 cut(s)	10, 160, 246, 560, 630, 949, 1042, 1166, 1612
HapII	CCGG	2 cut(s)	110, 155
HgaI	GACGC	1 cut(s)	421
HhaI	GCGC	3 cut(s)	446, 605, 1416
Hin1II	CATG	8 cut(s)	9, 346, 559, 635, 699, 797, 856, 1342
Hin6I	GCGC	3 cut(s)	444, 603, 1414
HinP1I	GCGC	3 cut(s)	444, 603, 1414
HincII	GTYRAC	2 cut(s)	121, 1147
HindII	GTYRAC	2 cut(s)	121, 1147
HinfI	GANTC	7 cut(s)	427, 635, 715, 779, 1259, 1368, 1409
HpaII	CCGG	2 cut(s)	110, 155
HphI	GGTGA	1 cut(s)	512
Hpy166II	GTNNAC	6 cut(s)	121, 911, 1130, 1140, 1147, 1465
Hpy188I	TCNGA	3 cut(s)	426, 468, 844
Hpy188III	TCNNGA	8 cut(s)	74, 400, 785, 965, 980, 1212, 1226, 1321
Hpy8I	GTNNAC	6 cut(s)	121, 911, 1130, 1140, 1147, 1465
HpyAV	CCTTC	4 cut(s)	620, 743, 1069, 1640
HpyCH4III	ACNGT	5 cut(s)	311, 838, 873, 1144, 1456
HpyCH4IV	ACGT	2 cut(s)	84, 1267
HpyCH4V	TGCA	8 cut(s)	23, 916, 1037, 1102, 1115, 1459, 1484, 1493
HpyF10VI	GCNNNNNNNGC	6 cut(s)	56, 413, 900, 1048, 1411, 1490
HpyF3I	CTNAG	4 cut(s)	60, 1002, 1134, 1407
HpySE526I	ACGT	2 cut(s)	84, 1267
Hsp92II	CATG	8 cut(s)	9, 346, 559, 635, 699, 797, 856, 1342
HspAI	GCGC	3 cut(s)	444, 603, 1414
KflI	GGGWCCC	1 cut(s)	1290
KpnI	GGTACC	1 cut(s)	617
Ksp22I	TGATCA	1 cut(s)	1192
LguI	GCTCTTC	1 cut(s)	33
LmnI	GCTCC	4 cut(s)	413, 699, 1388, 1561
Lsp1109I	GCAGC	3 cut(s)	35, 213, 1021
LweI	GCATC	3 cut(s)	122, 1333, 1573
MaeI	CTAG	1 cut(s)	47
MaeII	ACGT	2 cut(s)	84, 1267
MaeIII	GTNAC	8 cut(s)	85, 500, 646, 722, 820, 1075, 1083, 1527
MboII	GAAGA	6 cut(s)	20, 311, 482, 670, 944, 1239
MflI	RGATCY	2 cut(s)	752, 1055
MhlI	GDGCHC	1 cut(s)	548
MlsI	TGGCCA	2 cut(s)	10, 246
MluNI	TGGCCA	2 cut(s)	10, 246
MlyI	GAGTC	3 cut(s)	644, 773, 1418
MmeI	TCCRAC	1 cut(s)	980
Mox20I	TGGCCA	2 cut(s)	10, 246
Mph1103I	ATGCAT	1 cut(s)	1495
MscI	TGGCCA	2 cut(s)	10, 246
MseI	TTAA	2 cut(s)	207, 641
MslI	CAYNNNNRTG	2 cut(s)	198, 1356
Msp20I	TGGCCA	2 cut(s)	10, 246
MspA1I	CMGCKG	2 cut(s)	226, 827
MspI	CCGG	2 cut(s)	110, 155
MspR9I	CCNGG	4 cut(s)	156, 324, 1470, 1509
Mva1269I	GAATGC	1 cut(s)	1102
MvaI	CCWGG	3 cut(s)	324, 1470, 1509
MvnI	CGCG	4 cut(s)	432, 444, 605, 1414
MwoI	GCNNNNNNNGC	6 cut(s)	56, 413, 900, 1048, 1411, 1490
NciI	CCSGG	1 cut(s)	156
NcoI	CCATGG	1 cut(s)	555
NlaIII	CATG	8 cut(s)	9, 346, 559, 635, 699, 797, 856, 1342
NlaIV	GGNNCC	7 cut(s)	159, 615, 754, 1057, 1167, 1291, 1292
NmuCI	GTSAC	7 cut(s)	85, 500, 722, 820, 1075, 1083, 1527
NsiI	ATGCAT	1 cut(s)	1495
NspI	RCATGY	1 cut(s)	346
PaqCI	CACCTGC	1 cut(s)	946
PceI	AGGCCT	2 cut(s)	1042, 1612
PciI	ACATGT	1 cut(s)	342
PciSI	GCTCTTC	1 cut(s)	33
PctI	GAATGC	1 cut(s)	1102
PfeI	GAWTC	4 cut(s)	427, 715, 1259, 1368
Pfl23II	CGTACG	1 cut(s)	1264
PflFI	GACNNNGTC	1 cut(s)	1081
PkrI	GCNGC	4 cut(s)	25, 162, 228, 1036
Ple19I	CGATCG	1 cut(s)	979
PleI	GAGTC	3 cut(s)	643, 773, 1417
PpsI	GAGTC	3 cut(s)	643, 773, 1417
Ppu21I	YACGTR	1 cut(s)	1268
PpuMI	RGGWCCY	2 cut(s)	534, 1290
PscI	ACATGT	1 cut(s)	342
Psp5II	RGGWCCY	2 cut(s)	534, 1290
Psp6I	CCWGG	3 cut(s)	322, 1468, 1507
PspGI	CCWGG	3 cut(s)	322, 1468, 1507
PspLI	CGTACG	1 cut(s)	1264
PspN4I	GGNNCC	7 cut(s)	159, 615, 754, 1057, 1167, 1291, 1292
PspPI	GGNCC	7 cut(s)	158, 422, 534, 947, 962, 1165, 1290
PspPPI	RGGWCCY	2 cut(s)	534, 1290
PstI	CTGCAG	2 cut(s)	25, 1117
PstNI	CAGNNNCTG	2 cut(s)	56, 1034
PsuI	RGATCY	2 cut(s)	752, 1055
PsyI	GACNNNGTC	1 cut(s)	1081
PvuI	CGATCG	1 cut(s)	979
PvuII	CAGCTG	1 cut(s)	827
RsaI	GTAC	7 cut(s)	459, 509, 615, 912, 1068, 1266, 1466
RsaNI	GTAC	7 cut(s)	458, 508, 614, 911, 1067, 1265, 1465
RseI	CAYNNNNRTG	2 cut(s)	198, 1356
SalI	GTCGAC	1 cut(s)	119
SapI	GCTCTTC	1 cut(s)	33
SaqAI	TTAA	2 cut(s)	207, 641
SatI	GCNGC	4 cut(s)	24, 161, 227, 1035
Sau96I	GGNCC	7 cut(s)	158, 422, 534, 947, 962, 1165, 1290
SchI	GAGTC	3 cut(s)	644, 773, 1418
ScrFI	CCNGG	4 cut(s)	156, 324, 1470, 1509
SduI	GDGCHC	1 cut(s)	548
SfaNI	GCATC	3 cut(s)	122, 1333, 1573
SfcI	CTRYAG	4 cut(s)	21, 621, 882, 1113
SinI	GGWCC	4 cut(s)	422, 534, 962, 1290
SmiMI	CAYNNNNRTG	2 cut(s)	198, 1356
SseBI	AGGCCT	2 cut(s)	1042, 1612
SsiI	CCGC	3 cut(s)	161, 224, 1049
SspMI	CTAG	1 cut(s)	47
StuI	AGGCCT	2 cut(s)	1042, 1612
StyD4I	CCNGG	4 cut(s)	154, 322, 1468, 1507
StyI	CCWWGG	2 cut(s)	555, 1602
TaaI	ACNGT	5 cut(s)	311, 838, 873, 1144, 1456
TaiI	ACGT	2 cut(s)	87, 1270
TaqI	TCGA	4 cut(s)	120, 254, 975, 979
TatI	WGTACW	2 cut(s)	910, 1066
TauI	GCSGC	1 cut(s)	163
TfiI	GAWTC	4 cut(s)	427, 715, 1259, 1368
Tru1I	TTAA	2 cut(s)	207, 641
Tru9I	TTAA	2 cut(s)	207, 641
TscAI	CASTG	2 cut(s)	949, 1117
TseFI	GTSAC	7 cut(s)	85, 500, 722, 820, 1075, 1083, 1527
TseI	GCWGC	3 cut(s)	23, 226, 1034
Tsp45I	GTSAC	7 cut(s)	85, 500, 722, 820, 1075, 1083, 1527
TspDTI	ATGAA	7 cut(s)	182, 225, 234, 605, 782, 1084, 1095
TspGWI	ACGGA	1 cut(s)	1252
TspRI	CASTG	2 cut(s)	949, 1117
Tth111I	GACNNNGTC	1 cut(s)	1081
VpaK11BI	GGWCC	4 cut(s)	422, 534, 962, 1290
XagI	CCTNNNNNAGG	1 cut(s)	624
XapI	RAATTY	8 cut(s)	395, 482, 582, 896, 983, 1215, 1232, 1519
XceI	RCATGY	1 cut(s)	346
XcmI	CCANNNNNNNNNTGG	1 cut(s)	254
XmiI	GTMKAC	1 cut(s)	120
XspI	CTAG	1 cut(s)	47
Zsp2I	ATGCAT	1 cut(s)	1495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.