Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0005544

Physical Location & Seq

Genomic Coordinates Forward (+)

55606839 .. 55610035

Gene Structure 3197 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG284800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGGCCTATACTGGCCTGATCAAATGCGCAATATTGGTTTTAGCTCTTGTTGCTAGAGCCAATGCTATTCATATTTATCTTGATTGGGATGTGACCCTTGACAGCACTATCAAGCCTGTGTCTATGGATCAACCTGTCATCACCATAAATGGAAAGTTTCCAGGGCCTCTTATCAATGCCACAACCAATGACTTTGTTCATGTCAATGTCTTTAACAACATGGATGAGCCTCTACTATTTACATGGAATGGTATACAGCAAAGGCTAAACTCATGGCAAGATGGAGTTTCAGGAACAAATTGTCCGATTCTACCTGGTACAAACTGGACTTATGTGTTCCAAACCAAGGACCAGATTGGTAGCTTCTTCTACTTTCCATCCATCAACTTCCATAAGGCTGCTGGAGGGTTTGGAGCTATTCGTGTTATTAACCGCAAAGTCATTGCCGTCCCCTTCCCTGCACCAGAGGCAGAATTTGATCTCCTCATTGGTGATTGGTCTTATGACAGCTACAAGACAATTAGGTCACAGATGGATACTAGCGAGACGGCTTATTACACCTTTCCAGATATTATGTTGATGAATGGCAAAGGCCCTCTAGATAATCAAATGTCAAAAGACCATGAGTCCTTCGATGTCACACAAGGGAAGACATACAGGCTGAGAATATCAAATGTGGGGAATGCTGTGAGTTTCAATTTCAGGATTCAGAACCATCAAATGGTGTTGGTTGAAACAGAAGGGTCATATACTAATCAGATTACTTTGGATTCTCTGGATGTACATGTTGGTCAATCCTACTCAGTTCTTGTCACAGCAAATCAAGATGAGGCTGACTATTACATGGTGGCATCTCCCAAGCTGCTCAACACCTCTGATTTTAGCAGCCTGGTGGGCGTAGGGGTGTTGCACTATTCGAATTCTGTCTCAACAGTAGGCGGACCGCTGCCAGAAGGGCCTGACCCATTTGATGTCAATTTTTCGATGAATCAGGCCCGGTCTATTAGGTGGAACTTAACTGCTGGAGCTGCAAGGCCTAATCCACAAGGTAGCTTCAACGTCTCAAATGTGACCCTATCCCAAACCTTCGTCCTAGAAAGTACAGTGGCTCAAATTCATAATCTACCACGTTATGTTGTCAACAATGTGTCATATGACACTGTAACGACCCCGCTGAAACTCGCTGATTACTTTGTCAATGGTTCCGGTGTGTATCAACTTGATTCTTTTCCAGTGAAATCAGTCAACCCCGATGCTGGTTATGGAGTATTTGTAGTGACTGGAATCCACAAAGGGTGGATAGAAATAGTGTTTAAAAACAACCTGGCTGCCATGGATTCTTGGCATTTGGATGGTTACGGATTTTTTGTTGTTGGGTTCGGCATTGGAGATTGGACTACAGAATCACGGAGCACGTACAACCTCTACGATCCTGTTGTAAGATCAACCGTGCAAGTGTACCCGGGAGCATGGACTGCAGTGTATGCATTCCTAGACAACCCTGGAATGTGGAACTTGAGGTCACAACTACTGAAGCACTGGTACTTGGGACAAGAACTCTACGTACGAGTTTTTGATGCTGATCCTGACCCTGCTAAGGAGCGCCCGCCACCTGATAACCTCCTTCTATGTGGGATTTTTTCTGATTCTCCTCCAGCCCCAGCTCCAGGTCCATGGACAGGAGAGTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009653 GO:0009826 GO:0009932 GO:0009987 GO:0016020 GO:0016043 GO:0016049 GO:0016491 GO:0016722 GO:0030054 GO:0030312 GO:0031090 GO:0031224 GO:0031225 GO:0031226 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046658 GO:0048046 GO:0048589 GO:0048856 GO:0048869 GO:0055044 GO:0055114 GO:0060560 GO:0071840 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

563

Amino Acids

62.54

Weight (kDa)

4.94

Isoelectric Point (pI)

33.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	38 - 145	3.3e-37	Multicopper oxidase
Cu-oxidase	PF00394	161 - 308	1.1e-39	Multicopper oxidase
Cu-oxidase_2	PF07731	393 - 526	1.4e-28	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005544)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g18341 FvH4_7g18350
malus_domestica	MD01G1098800.v1.1 MD01G1099000.v1.1 MD07G1165500.v1.1 MD07G1165800.v1.1
prunus_persica	Prupe.2G205500_v2.0.a1 Prupe.2G205600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0362061 RchiOBHm_Chr1g0362091 RchiOBHm_Chr7g0206161
rosa_laevigata	RLG00000027672 RLG00000027676
rosa_multiflora	Rmu_co8403161.1_g000001 Rmu_sc0010614.1_g000004
rosa_roxburghii	Rroxscaffold_4G00294510 Rroxscaffold_4G00294540
rosa_rugosa	Rorug01G0293200 Rorug01G0293600
rosa_samantha	Rh1BG266700 Rh1BG267000 Rh1CG284800 Rh1CG285100 Rh1DG296700 Rh1DG297100 Rh7DG233000
rosa_wichuraiana	Rw1G027020 Rw1G027050 Rw7G019480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	523
Acc16I	TGCGCA	1 cut(s)	28
AccB7I	CCANNNNNTGG	1 cut(s)	721
AccI	GTMKAC	1 cut(s)	253
AciI	CCGC	5 cut(s)	433, 939, 944, 1172, 1607
AclWI	GGATC	3 cut(s)	135, 1424, 1577
AcsI	RAATTY	3 cut(s)	473, 919, 1113
AcuI	CTGAAG	1 cut(s)	1553
AfaI	GTAC	7 cut(s)	319, 783, 1102, 1418, 1460, 1544, 1566
AfiI	CCNNNNNNNGG	6 cut(s)	346, 721, 1256, 1597, 1667, 1679
AflIII	ACRYGT	1 cut(s)	784
AgsI	TTSAA	3 cut(s)	697, 734, 1057
AhdI	GACNNNNNGTC	1 cut(s)	625
AjnI	CCWGG	6 cut(s)	160, 313, 888, 1323, 1501, 1666
AloI	GAACNNNNNNTCC	2 cut(s)	286, 318
AluBI	AGCT	8 cut(s)	44, 363, 416, 510, 862, 1028, 1053, 1664
AluI	AGCT	8 cut(s)	44, 363, 416, 510, 862, 1028, 1053, 1664
Alw21I	GWGCWC	1 cut(s)	1415
Alw26I	GTCTC	3 cut(s)	539, 931, 1066
AlwI	GGATC	3 cut(s)	135, 1424, 1577
Ama87I	CYCGRG	1 cut(s)	1462
AoxI	GGCC	7 cut(s)	3, 13, 164, 592, 956, 993, 1034
ApeKI	GCWGC	6 cut(s)	398, 862, 885, 946, 1028, 1328
ApoI	RAATTY	3 cut(s)	473, 919, 1113
AspLEI	GCGC	2 cut(s)	29, 1605
AspS9I	GGNCC	7 cut(s)	164, 349, 593, 941, 956, 994, 1670
AsuC2I	CCSGG	3 cut(s)	997, 1463, 1464
AsuHPI	GGTGA	2 cut(s)	133, 503
AsuII	TTCGAA	1 cut(s)	917
AvaI	CYCGRG	1 cut(s)	1462
AvaII	GGWCC	3 cut(s)	349, 941, 1670
BarI	GAAGNNNNNNTAC	2 cut(s)	1526, 1558
BbsI	GAAGAC	1 cut(s)	656
Bbv12I	GWGCWC	1 cut(s)	1415
BbvI	GCAGC	6 cut(s)	385, 849, 897, 933, 1015, 1315
BccI	CCATC	6 cut(s)	275, 385, 389, 526, 723, 1346
BceAI	ACGGC	2 cut(s)	431, 564
BciT130I	CCWGG	6 cut(s)	162, 315, 890, 1325, 1503, 1668
BciVI	GTATCC	1 cut(s)	529
BclI	TGATCA	1 cut(s)	18
BcnI	CCSGG	3 cut(s)	997, 1463, 1464
BcoDI	GTCTC	3 cut(s)	539, 931, 1066
BfaI	CTAG	5 cut(s)	54, 540, 599, 1094, 1493
BfmI	CTRYAG	2 cut(s)	1398, 1476
BfoI	RGCGCY	1 cut(s)	1606
BfuI	GTATCC	1 cut(s)	529
BglI	GCCNNNNNGGC	2 cut(s)	894, 955
BisI	GCNGC	6 cut(s)	399, 863, 886, 947, 1029, 1329
BlsI	GCNGC	6 cut(s)	400, 864, 887, 948, 1030, 1330
Bme1390I	CCNGG	9 cut(s)	162, 315, 890, 997, 1325, 1463, 1464, 1503, 1668
Bme18I	GGWCC	3 cut(s)	349, 941, 1670
BmeRI	GACNNNNNGTC	1 cut(s)	625
BmeT110I	CYCGRG	1 cut(s)	1462
BmgT120I	GGNCC	7 cut(s)	164, 349, 593, 941, 956, 994, 1670
BmiI	GGNNCC	1 cut(s)	1204
BmrFI	CCNGG	9 cut(s)	162, 315, 890, 997, 1325, 1463, 1464, 1503, 1668
BmsI	GCATC	3 cut(s)	860, 1243, 1567
BpiI	GAAGAC	1 cut(s)	656
BpmI	CTGGAG	4 cut(s)	423, 1044, 1638, 1650
Bpu10I	CCTNAGC	1 cut(s)	1596
Bpu14I	TTCGAA	1 cut(s)	917
BpuEI	CTTGAG	1 cut(s)	1537
BpuMI	CCSGG	3 cut(s)	997, 1463, 1464
BsaAI	YACGTR	2 cut(s)	1416, 1564
BsaBI	GATNNNNATC	1 cut(s)	1581
BsaJI	CCNNGG	6 cut(s)	161, 345, 1332, 1462, 1501, 1673
BsaWI	WCCGGW	1 cut(s)	1205
BsaXI	ACNNNNNCTCC	2 cut(s)	1257, 1287
Bsc4I	CCNNNNNNNGG	6 cut(s)	346, 721, 1256, 1597, 1667, 1679
Bse1I	ACTGG	5 cut(s)	16, 329, 1232, 1285, 1544
Bse3DI	GCAATG	1 cut(s)	441
Bse8I	GATNNNNATC	1 cut(s)	1581
BseBI	CCWGG	6 cut(s)	162, 315, 890, 1325, 1503, 1668
BseDI	CCNNGG	6 cut(s)	161, 345, 1332, 1462, 1501, 1673
BseGI	GGATG	5 cut(s)	94, 229, 377, 784, 1357
BseJI	GATNNNNATC	1 cut(s)	1581
BseLI	CCNNNNNNNGG	6 cut(s)	346, 721, 1256, 1597, 1667, 1679
BseMI	GCAATG	1 cut(s)	441
BseMII	CTCAG	2 cut(s)	653, 816
BseNI	ACTGG	5 cut(s)	16, 329, 1232, 1285, 1544
BseRI	GAGGAG	2 cut(s)	473, 1641
BseXI	GCAGC	6 cut(s)	385, 849, 897, 933, 1015, 1315
BseYI	CCCAGC	1 cut(s)	1660
BsgI	GTGCAG	1 cut(s)	444
BshFI	GGCC	7 cut(s)	5, 15, 166, 594, 958, 995, 1036
BsiHKAI	GWGCWC	1 cut(s)	1415
BsiHKCI	CYCGRG	1 cut(s)	1462
BsiSI	CCGG	3 cut(s)	997, 1206, 1463
BsiWI	CGTACG	1 cut(s)	1564
BslFI	GGGAC	2 cut(s)	434, 1563
BslI	CCNNNNNNNGG	6 cut(s)	346, 721, 1256, 1597, 1667, 1679
BsmAI	GTCTC	3 cut(s)	539, 931, 1066
BsmBI	CGTCTC	2 cut(s)	539, 1066
BsmFI	GGGAC	2 cut(s)	434, 1563
BsmI	GAATGC	2 cut(s)	688, 1487
BsnI	GGCC	7 cut(s)	5, 15, 166, 594, 958, 995, 1036
BsoBI	CYCGRG	1 cut(s)	1462
Bsp119I	TTCGAA	1 cut(s)	917
Bsp1286I	GDGCHC	1 cut(s)	1415
Bsp1407I	TGTACA	1 cut(s)	781
Bsp143I	GATC	6 cut(s)	18, 127, 478, 1429, 1442, 1582
Bsp19I	CCATGG	2 cut(s)	1332, 1673
BspACI	CCGC	5 cut(s)	433, 939, 944, 1172, 1607
BspANI	GGCC	7 cut(s)	5, 15, 166, 594, 958, 995, 1036
BspCNI	CTCAG	2 cut(s)	654, 815
BspLI	GGNNCC	1 cut(s)	1204
BspMAI	CTGCAG	1 cut(s)	1480
BspPI	GGATC	3 cut(s)	135, 1424, 1577
BspT104I	TTCGAA	1 cut(s)	917
BsrDI	GCAATG	1 cut(s)	441
BsrGI	TGTACA	1 cut(s)	781
BsrI	ACTGG	5 cut(s)	16, 329, 1232, 1285, 1544
BssECI	CCNNGG	6 cut(s)	161, 345, 1332, 1462, 1501, 1673
BssMI	GATC	6 cut(s)	18, 127, 478, 1429, 1442, 1582
BssNAI	GTATAC	1 cut(s)	254
BssT1I	CCWWGG	3 cut(s)	345, 1332, 1673
Bst1107I	GTATAC	1 cut(s)	254
Bst2UI	CCWGG	6 cut(s)	162, 315, 890, 1325, 1503, 1668
Bst4CI	ACNGT	4 cut(s)	934, 1105, 1162, 1450
BstAPI	GCANNNNNTGC	2 cut(s)	1475, 1484
BstAUI	TGTACA	1 cut(s)	781
BstBAI	YACGTR	2 cut(s)	1416, 1564
BstBI	TTCGAA	1 cut(s)	917
BstC8I	GCNNGC	1 cut(s)	1607
BstDEI	CTNAG	3 cut(s)	662, 802, 1596
BstDSI	CCRYGG	2 cut(s)	1332, 1673
BstF5I	GGATG	5 cut(s)	94, 229, 377, 784, 1357
BstH2I	RGCGCY	1 cut(s)	1606
BstHHI	GCGC	2 cut(s)	29, 1605
BstKTI	GATC	6 cut(s)	21, 130, 481, 1432, 1445, 1585
BstMAI	GTCTC	3 cut(s)	539, 931, 1066
BstMBI	GATC	6 cut(s)	18, 127, 478, 1429, 1442, 1582
BstMWI	GCNNNNNNNGC	7 cut(s)	50, 467, 894, 955, 1028, 1475, 1484
BstNI	CCWGG	6 cut(s)	162, 315, 890, 1325, 1503, 1668
BstNSI	RCATGY	1 cut(s)	788
BstSCI	CCNGG	9 cut(s)	160, 313, 888, 995, 1323, 1461, 1462, 1501, 1666
BstSFI	CTRYAG	2 cut(s)	1398, 1476
BstSNI	TACGTA	1 cut(s)	1564
BstV1I	GCAGC	6 cut(s)	385, 849, 897, 933, 1015, 1315
BstV2I	GAAGAC	1 cut(s)	656
BstXI	CCANNNNNNTGG	1 cut(s)	1674
BstZ17I	GTATAC	1 cut(s)	254
BsuI	GTATCC	1 cut(s)	529
BsuRI	GGCC	7 cut(s)	5, 15, 166, 594, 958, 995, 1036
BtgI	CCRYGG	2 cut(s)	1332, 1673
BtsCI	GGATG	5 cut(s)	94, 229, 377, 784, 1357
BtsI	GCAGTG	1 cut(s)	1485
BtsIMutI	CAGTG	5 cut(s)	1110, 1158, 1239, 1485, 1537
Cac8I	GCNNGC	1 cut(s)	1607
CfoI	GCGC	2 cut(s)	29, 1605
Cfr13I	GGNCC	7 cut(s)	164, 349, 593, 941, 956, 994, 1670
Cfr9I	CCCGGG	1 cut(s)	1462
CpoI	CGGWCCG	1 cut(s)	941
CsiI	ACCWGGT	1 cut(s)	313
Csp6I	GTAC	7 cut(s)	318, 782, 1101, 1417, 1459, 1543, 1565
CspI	CGGWCCG	1 cut(s)	941
CviQI	GTAC	7 cut(s)	318, 782, 1101, 1417, 1459, 1543, 1565
DdeI	CTNAG	3 cut(s)	662, 802, 1596
DpnI	GATC	6 cut(s)	20, 129, 480, 1431, 1444, 1584
DpnII	GATC	6 cut(s)	18, 127, 478, 1429, 1442, 1582
DraI	TTTAAA	1 cut(s)	1315
DrdI	GACNNNNNNGTC	1 cut(s)	523
DriI	GACNNNNNGTC	1 cut(s)	625
DseDI	GACNNNNNNGTC	1 cut(s)	523
Eam1105I	GACNNNNNGTC	1 cut(s)	625
EciI	GGCGGA	1 cut(s)	954
Eco105I	TACGTA	1 cut(s)	1564
Eco130I	CCWWGG	3 cut(s)	345, 1332, 1673
Eco147I	AGGCCT	1 cut(s)	1036
Eco47I	GGWCC	3 cut(s)	349, 941, 1670
Eco57I	CTGAAG	1 cut(s)	1553
Eco88I	CYCGRG	1 cut(s)	1462
EcoO109I	RGGNCCY	3 cut(s)	164, 593, 956
EcoRI	GAATTC	1 cut(s)	919
EcoRII	CCWGG	6 cut(s)	160, 313, 888, 1323, 1501, 1666
EcoT14I	CCWWGG	3 cut(s)	345, 1332, 1673
EcoT22I	ATGCAT	1 cut(s)	1489
ErhI	CCWWGG	3 cut(s)	345, 1332, 1673
Esp3I	CGTCTC	2 cut(s)	539, 1066
FaqI	GGGAC	2 cut(s)	434, 1563
FauI	CCCGC	2 cut(s)	1179, 1614
FauNDI	CATATG	1 cut(s)	1153
FbaI	TGATCA	1 cut(s)	18
FblI	GTMKAC	1 cut(s)	253
Fnu4HI	GCNGC	6 cut(s)	399, 863, 886, 947, 1029, 1329
FokI	GGATG	5 cut(s)	101, 236, 364, 791, 1364
Fsp4HI	GCNGC	6 cut(s)	399, 863, 886, 947, 1029, 1329
FspBI	CTAG	5 cut(s)	54, 540, 599, 1094, 1493
FspI	TGCGCA	1 cut(s)	28
GlaI	GCGC	2 cut(s)	28, 1604
GluI	GCNGC	6 cut(s)	399, 863, 886, 947, 1029, 1329
GsaI	CCCAGC	1 cut(s)	1664
GsuI	CTGGAG	4 cut(s)	423, 1044, 1638, 1650
HaeII	RGCGCY	1 cut(s)	1606
HaeIII	GGCC	7 cut(s)	5, 15, 166, 594, 958, 995, 1036
HapII	CCGG	3 cut(s)	997, 1206, 1463
HhaI	GCGC	2 cut(s)	29, 1605
Hin6I	GCGC	2 cut(s)	27, 1603
HinP1I	GCGC	2 cut(s)	27, 1603
HincII	GTYRAC	2 cut(s)	1141, 1246
HindII	GTYRAC	2 cut(s)	1141, 1246
HpaII	CCGG	3 cut(s)	997, 1206, 1463
HphI	GGTGA	2 cut(s)	133, 503
Hpy166II	GTNNAC	4 cut(s)	254, 1141, 1246, 1459
Hpy188I	TCNGA	5 cut(s)	306, 711, 759, 877, 1645
Hpy188III	TCNNGA	8 cut(s)	80, 291, 566, 599, 703, 776, 824, 1586
Hpy8I	GTNNAC	4 cut(s)	254, 1141, 1246, 1459
HpyAV	CCTTC	6 cut(s)	463, 640, 734, 947, 1096, 1634
HpyCH4III	ACNGT	4 cut(s)	934, 1105, 1162, 1450
HpyCH4IV	ACGT	4 cut(s)	1059, 1129, 1415, 1563
HpyCH4V	TGCA	6 cut(s)	461, 910, 1031, 1453, 1478, 1487
HpyF10VI	GCNNNNNNNGC	7 cut(s)	50, 467, 894, 955, 1028, 1475, 1484
HpyF3I	CTNAG	3 cut(s)	662, 802, 1596
HpySE526I	ACGT	4 cut(s)	1059, 1129, 1415, 1563
HspAI	GCGC	2 cut(s)	27, 1603
Ksp22I	TGATCA	1 cut(s)	18
Kzo9I	GATC	6 cut(s)	18, 127, 478, 1429, 1442, 1582
LmnI	GCTCC	6 cut(s)	413, 1025, 1410, 1466, 1600, 1669
Lsp1109I	GCAGC	6 cut(s)	385, 849, 897, 933, 1015, 1315
LweI	GCATC	3 cut(s)	860, 1243, 1567
MabI	ACCWGGT	1 cut(s)	313
MaeI	CTAG	5 cut(s)	54, 540, 599, 1094, 1493
MaeII	ACGT	4 cut(s)	1059, 1129, 1415, 1563
MaeIII	GTNAC	9 cut(s)	91, 525, 637, 811, 1069, 1162, 1276, 1355, 1521
MalI	GATC	6 cut(s)	20, 129, 480, 1431, 1444, 1584
MboI	GATC	6 cut(s)	18, 127, 478, 1429, 1442, 1582
MboII	GAAGA	2 cut(s)	358, 661
MhlI	GDGCHC	1 cut(s)	1415
MluCI	AATT	7 cut(s)	298, 473, 519, 697, 919, 976, 1113
MlyI	GAGTC	1 cut(s)	635
Mph1103I	ATGCAT	1 cut(s)	1489
MseI	TTAA	4 cut(s)	213, 429, 1016, 1314
MslI	CAYNNNNRTG	2 cut(s)	204, 1350
MspA1I	CMGCKG	2 cut(s)	946, 1174
MspI	CCGG	3 cut(s)	997, 1206, 1463
MspR9I	CCNGG	9 cut(s)	162, 315, 890, 997, 1325, 1463, 1464, 1503, 1668
Mva1269I	GAATGC	2 cut(s)	688, 1487
MvaI	CCWGG	6 cut(s)	162, 315, 890, 1325, 1503, 1668
MwoI	GCNNNNNNNGC	7 cut(s)	50, 467, 894, 955, 1028, 1475, 1484
NciI	CCSGG	3 cut(s)	997, 1463, 1464
NcoI	CCATGG	2 cut(s)	1332, 1673
NdeI	CATATG	1 cut(s)	1153
NdeII	GATC	6 cut(s)	18, 127, 478, 1429, 1442, 1582
NlaIV	GGNNCC	1 cut(s)	1204
NmuCI	GTSAC	7 cut(s)	91, 525, 637, 811, 1069, 1276, 1521
NsbI	TGCGCA	1 cut(s)	28
NsiI	ATGCAT	1 cut(s)	1489
NspI	RCATGY	1 cut(s)	788
NspV	TTCGAA	1 cut(s)	917
PceI	AGGCCT	1 cut(s)	1036
PciI	ACATGT	1 cut(s)	784
PctI	GAATGC	2 cut(s)	688, 1487
PfeI	GAWTC	9 cut(s)	307, 706, 770, 988, 1223, 1284, 1337, 1403, 1646
Pfl23II	CGTACG	1 cut(s)	1564
PflMI	CCANNNNNTGG	1 cut(s)	721
PkrI	GCNGC	6 cut(s)	400, 864, 887, 948, 1030, 1330
PleI	GAGTC	1 cut(s)	634
PpsI	GAGTC	1 cut(s)	634
Ppu21I	YACGTR	2 cut(s)	1416, 1564
PscI	ACATGT	1 cut(s)	784
Psp6I	CCWGG	6 cut(s)	160, 313, 888, 1323, 1501, 1666
PspFI	CCCAGC	1 cut(s)	1660
PspGI	CCWGG	6 cut(s)	160, 313, 888, 1323, 1501, 1666
PspLI	CGTACG	1 cut(s)	1564
PspN4I	GGNNCC	1 cut(s)	1204
PspPI	GGNCC	7 cut(s)	164, 349, 593, 941, 956, 994, 1670
PsrI	GAACNNNNNNTAC	2 cut(s)	1548, 1580
PstI	CTGCAG	1 cut(s)	1480
RsaI	GTAC	7 cut(s)	319, 783, 1102, 1418, 1460, 1544, 1566
RsaNI	GTAC	7 cut(s)	318, 782, 1101, 1417, 1459, 1543, 1565
RseI	CAYNNNNRTG	2 cut(s)	204, 1350
Rsr2I	CGGWCCG	1 cut(s)	941
RsrII	CGGWCCG	1 cut(s)	941
SaqAI	TTAA	4 cut(s)	213, 429, 1016, 1314
SatI	GCNGC	6 cut(s)	399, 863, 886, 947, 1029, 1329
Sau3AI	GATC	6 cut(s)	18, 127, 478, 1429, 1442, 1582
Sau96I	GGNCC	7 cut(s)	164, 349, 593, 941, 956, 994, 1670
SchI	GAGTC	1 cut(s)	635
ScrFI	CCNGG	9 cut(s)	162, 315, 890, 997, 1325, 1463, 1464, 1503, 1668
SduI	GDGCHC	1 cut(s)	1415
SexAI	ACCWGGT	1 cut(s)	313
SfaNI	GCATC	3 cut(s)	860, 1243, 1567
SfcI	CTRYAG	2 cut(s)	1398, 1476
SfuI	TTCGAA	1 cut(s)	917
SinI	GGWCC	3 cut(s)	349, 941, 1670
SmaI	CCCGGG	1 cut(s)	1464
SmiMI	CAYNNNNRTG	2 cut(s)	204, 1350
SmlI	CTYRAG	1 cut(s)	1516
SmoI	CTYRAG	1 cut(s)	1516
SnaBI	TACGTA	1 cut(s)	1564
Sse9I	AATT	7 cut(s)	298, 473, 519, 697, 919, 976, 1113
SseBI	AGGCCT	1 cut(s)	1036
SsiI	CCGC	5 cut(s)	433, 939, 944, 1172, 1607
SspI	AATATT	1 cut(s)	33
SspMI	CTAG	5 cut(s)	54, 540, 599, 1094, 1493
StuI	AGGCCT	1 cut(s)	1036
StyD4I	CCNGG	9 cut(s)	160, 313, 888, 995, 1323, 1461, 1462, 1501, 1666
StyI	CCWWGG	3 cut(s)	345, 1332, 1673
TaaI	ACNGT	4 cut(s)	934, 1105, 1162, 1450
TaiI	ACGT	4 cut(s)	1062, 1132, 1418, 1566
TaqI	TCGA	3 cut(s)	633, 917, 983
TasI	AATT	7 cut(s)	298, 473, 519, 697, 919, 976, 1113
TatI	WGTACW	2 cut(s)	781, 1100
TfiI	GAWTC	9 cut(s)	307, 706, 770, 988, 1223, 1284, 1337, 1403, 1646
Tru1I	TTAA	4 cut(s)	213, 429, 1016, 1314
Tru9I	TTAA	4 cut(s)	213, 429, 1016, 1314
TscAI	CASTG	5 cut(s)	1110, 1165, 1239, 1485, 1544
TseFI	GTSAC	7 cut(s)	91, 525, 637, 811, 1069, 1276, 1521
TseI	GCWGC	6 cut(s)	398, 862, 885, 946, 1028, 1328
Tsp45I	GTSAC	7 cut(s)	91, 525, 637, 811, 1069, 1276, 1521
TspDTI	ATGAA	5 cut(s)	59, 188, 596, 1001, 1106
TspGWI	ACGGA	2 cut(s)	1374, 1423
TspMI	CCCGGG	1 cut(s)	1462
TspRI	CASTG	5 cut(s)	1110, 1165, 1239, 1485, 1544
Van91I	CCANNNNNTGG	1 cut(s)	721
VpaK11BI	GGWCC	3 cut(s)	349, 941, 1670
XapI	RAATTY	3 cut(s)	473, 919, 1113
XbaI	TCTAGA	1 cut(s)	598
XceI	RCATGY	1 cut(s)	788
XcmI	CCANNNNNNNNNTGG	1 cut(s)	398
XmaI	CCCGGG	1 cut(s)	1462
XmiI	GTMKAC	1 cut(s)	253
XspI	CTAG	5 cut(s)	54, 540, 599, 1094, 1493
Zsp2I	ATGCAT	1 cut(s)	1489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.