Rw7G019480

Monocopper oxidase-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0005544
Physical Location & Seq
Reverse (-)
21583159 .. 21584440
1282 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G019480.1

Sequence Viewer

Length: 870 bp
ATGACCAAATTTGGAATTGGTGTGCTGCACTATGATAACTCCACCACAGCTGCTAGTGGACCACTACTAATTGGCCATGATCCTTGTGATATAGAACTATCCATCAGTCAAGCCAACTCCATCAAGTGGAACCTGACTACAGGGGCAGCAAGGCCTAATCCACAAGGATCCTTCAACGTTCATAATGTGACACTATCACAGACATTCATACTAAGTGCATCAACAGCAGAGATTGATGGTGCACCCAAGTTTACTGTCAACAATGTGTCTTACTTGACCCCAGATACACCATTGAAGTTGGCTGATCACTTGGTCAACGGTTCTGGAGTTTACGAGCTTGATGAATTCTCTACTAACTCTACAAATATTAAACCTGAGCGTGGAGTTTTTGTTGCAAGTGGGATACACAAAGGGTGGATAGAACTTGTTTTGCACAATGATTTGGAGGTCATGGACTCTTGGCATTTATATGGCTTCAGATTCTTTGTTGTTGGCTATGGCCGTGGAAAGTGGAGTGCTAAGTCGCGCTCAACCTACAACCTTTATGATCCAGTGGTGCGTTCTACTATACAAGTGTACCCCAAGAGGTGGAGTGCAGTTTATGCATACCTTGATAACACTGGAATGTGGAATTTGAGGTCACAGCACTTGAAAAATTGGTATTTGGGTGAAGAGCTATATGTGAGAGTTTATGATGTTGATCCCAACCTTGGAAAAGAAAGGCCTTCCCCTAATAACATTCTTCTTTGTGGAAAATTTGCCCCACCCACTTCTCCTTCTGGACCGTCTGCGCCTCCTCCAAAGCCATCTAGTGCACCATCTTTGCAAATTATAGCAGCAGGGTACGTACTAATCAGACAAACTAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

289

Amino Acids

31.86

Weight (kDa)

7.78

Isoelectric Point (pI)

45.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_2 PF07731 96 - 232 7.2e-27 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 126, 588
AccII CGCG 1 cut(s) 526
AclI AACGTT 1 cut(s) 177
AclWI GGATC 5 cut(s) 74, 162, 175, 542, 695
AcoI YGGCCR 2 cut(s) 73, 499
AcsI RAATTY 4 cut(s) 8, 344, 631, 755
AcuI CTGAAG 1 cut(s) 460
AfaI GTAC 3 cut(s) 578, 845, 849
AfiI CCNNNNNNNGG 4 cut(s) 126, 380, 588, 710
AgsI TTSAA 3 cut(s) 175, 295, 652
AluBI AGCT 4 cut(s) 50, 337, 676, 867
AluI AGCT 4 cut(s) 50, 337, 676, 867
Alw21I GWGCWC 2 cut(s) 244, 817
Alw44I GTGCAC 2 cut(s) 240, 813
AlwI GGATC 5 cut(s) 74, 162, 175, 542, 695
AoxI GGCC 4 cut(s) 73, 152, 499, 722
ApaLI GTGCAC 2 cut(s) 240, 813
ApeKI GCWGC 4 cut(s) 25, 50, 146, 836
ApoI RAATTY 4 cut(s) 8, 344, 631, 755
AspLEI GCGC 2 cut(s) 528, 793
AspS9I GGNCC 2 cut(s) 59, 782
AsuHPI GGTGA 1 cut(s) 680
AvaII GGWCC 2 cut(s) 59, 782
BaeGI GKGCMC 2 cut(s) 244, 817
BaeI ACNNNNGTAYC 2 cut(s) 560, 593
BalI TGGCCA 1 cut(s) 75
BamHI GGATCC 1 cut(s) 167
Bbv12I GWGCWC 2 cut(s) 244, 817
BbvI GCAGC 4 cut(s) 12, 37, 158, 848
BccI CCATC 5 cut(s) 110, 128, 230, 814, 826
BceAI ACGGC 1 cut(s) 486
BciVI GTATCC 1 cut(s) 396
BclI TGATCA 1 cut(s) 304
BfaI CTAG 4 cut(s) 54, 810, 864, 868
BfmI CTRYAG 1 cut(s) 138
BfuI GTATCC 1 cut(s) 396
BisI GCNGC 4 cut(s) 26, 51, 147, 837
BlsI GCNGC 4 cut(s) 27, 52, 148, 838
Bme18I GGWCC 2 cut(s) 59, 782
BmgT120I GGNCC 2 cut(s) 59, 782
BmiI GGNNCC 2 cut(s) 131, 169
BmsI GCATC 1 cut(s) 227
BpmI CTGGAG 1 cut(s) 345
Bpu10I CCTNAGC 1 cut(s) 375
BsaAI YACGTR 1 cut(s) 847
BsaBI GATNNNNATC 1 cut(s) 699
BsaJI CCNNGG 2 cut(s) 502, 709
BsaXI ACNNNNNCTCC 2 cut(s) 375, 405
Bsc4I CCNNNNNNNGG 4 cut(s) 126, 380, 588, 710
Bse1I ACTGG 2 cut(s) 551, 625
Bse8I GATNNNNATC 1 cut(s) 699
BseDI CCNNGG 2 cut(s) 502, 709
BseJI GATNNNNATC 1 cut(s) 699
BseLI CCNNNNNNNGG 4 cut(s) 126, 380, 588, 710
BseMII CTCAG 1 cut(s) 366
BseNI ACTGG 2 cut(s) 551, 625
BseRI GAGGAG 1 cut(s) 786
BseSI GKGCMC 2 cut(s) 244, 817
BseXI GCAGC 4 cut(s) 12, 37, 158, 848
BsgI GTGCAG 2 cut(s) 11, 615
Bsh1236I CGCG 1 cut(s) 526
BshFI GGCC 4 cut(s) 75, 154, 501, 724
BsiHKAI GWGCWC 2 cut(s) 244, 817
BslI CCNNNNNNNGG 4 cut(s) 126, 380, 588, 710
BsnI GGCC 4 cut(s) 75, 154, 501, 724
Bsp1286I GDGCHC 2 cut(s) 244, 817
Bsp143I GATC 5 cut(s) 79, 167, 304, 547, 700
BspANI GGCC 4 cut(s) 75, 154, 501, 724
BspCNI CTCAG 1 cut(s) 367
BspFNI CGCG 1 cut(s) 526
BspLI GGNNCC 2 cut(s) 131, 169
BspPI GGATC 5 cut(s) 74, 162, 175, 542, 695
BspQI GCTCTTC 1 cut(s) 666
BsrI ACTGG 2 cut(s) 551, 625
BssECI CCNNGG 2 cut(s) 502, 709
BssMI GATC 5 cut(s) 79, 167, 304, 547, 700
BssT1I CCWWGG 1 cut(s) 709
Bst4CI ACNGT 3 cut(s) 256, 320, 786
Bst6I CTCTTC 1 cut(s) 666
BstAPI GCANNNNNTGC 1 cut(s) 602
BstBAI YACGTR 1 cut(s) 847
BstDEI CTNAG 3 cut(s) 212, 375, 519
BstDSI CCRYGG 1 cut(s) 502
BstFNI CGCG 1 cut(s) 526
BstHHI GCGC 2 cut(s) 528, 793
BstKTI GATC 5 cut(s) 82, 170, 307, 550, 703
BstMBI GATC 5 cut(s) 79, 167, 304, 547, 700
BstMWI GCNNNNNNNGC 2 cut(s) 224, 602
BstSFI CTRYAG 1 cut(s) 138
BstSLI GKGCMC 2 cut(s) 244, 817
BstSNI TACGTA 1 cut(s) 847
BstUI CGCG 1 cut(s) 526
BstV1I GCAGC 4 cut(s) 12, 37, 158, 848
BstX2I RGATCY 1 cut(s) 167
BstYI RGATCY 1 cut(s) 167
BsuI GTATCC 1 cut(s) 396
BsuRI GGCC 4 cut(s) 75, 154, 501, 724
BtgI CCRYGG 1 cut(s) 502
BtsIMutI CAGTG 2 cut(s) 558, 618
CfoI GCGC 2 cut(s) 528, 793
Cfr13I GGNCC 2 cut(s) 59, 782
Csp6I GTAC 3 cut(s) 577, 844, 848
CviAII CATG 2 cut(s) 77, 451
CviQI GTAC 3 cut(s) 577, 844, 848
DdeI CTNAG 3 cut(s) 212, 375, 519
DpnI GATC 5 cut(s) 81, 169, 306, 549, 702
DpnII GATC 5 cut(s) 79, 167, 304, 547, 700
EaeI YGGCCR 2 cut(s) 73, 499
Eam1104I CTCTTC 1 cut(s) 666
EarI CTCTTC 1 cut(s) 666
Eco105I TACGTA 1 cut(s) 847
Eco130I CCWWGG 1 cut(s) 709
Eco147I AGGCCT 2 cut(s) 154, 724
Eco47I GGWCC 2 cut(s) 59, 782
Eco57I CTGAAG 1 cut(s) 460
EcoRI GAATTC 1 cut(s) 344
EcoT14I CCWWGG 1 cut(s) 709
EcoT22I ATGCAT 1 cut(s) 607
ErhI CCWWGG 1 cut(s) 709
FaeI CATG 2 cut(s) 80, 454
FatI CATG 2 cut(s) 76, 450
FbaI TGATCA 1 cut(s) 304
Fnu4HI GCNGC 4 cut(s) 26, 51, 147, 837
Fsp4HI GCNGC 4 cut(s) 26, 51, 147, 837
FspBI CTAG 4 cut(s) 54, 810, 864, 868
GlaI GCGC 2 cut(s) 527, 792
GluI GCNGC 4 cut(s) 26, 51, 147, 837
GsuI CTGGAG 1 cut(s) 345
HaeIII GGCC 4 cut(s) 75, 154, 501, 724
HhaI GCGC 2 cut(s) 528, 793
Hin1II CATG 2 cut(s) 80, 454
Hin6I GCGC 2 cut(s) 526, 791
HinP1I GCGC 2 cut(s) 526, 791
HincII GTYRAC 2 cut(s) 259, 316
HindII GTYRAC 2 cut(s) 259, 316
HinfI GANTC 2 cut(s) 455, 480
HphI GGTGA 1 cut(s) 680
Hpy166II GTNNAC 8 cut(s) 59, 242, 252, 259, 316, 331, 577, 815
Hpy188I TCNGA 2 cut(s) 479, 857
Hpy188III TCNNGA 2 cut(s) 324, 780
Hpy8I GTNNAC 8 cut(s) 59, 242, 252, 259, 316, 331, 577, 815
HpyAV CCTTC 3 cut(s) 181, 735, 786
HpyCH4III ACNGT 3 cut(s) 256, 320, 786
HpyCH4IV ACGT 2 cut(s) 177, 846
HpyCH4V TGCA 9 cut(s) 28, 218, 242, 395, 433, 596, 605, 815, 826
HpyF10VI GCNNNNNNNGC 2 cut(s) 224, 602
HpyF3I CTNAG 3 cut(s) 212, 375, 519
HpySE526I ACGT 2 cut(s) 177, 846
Hsp92II CATG 2 cut(s) 80, 454
HspAI GCGC 2 cut(s) 526, 791
Ksp22I TGATCA 1 cut(s) 304
Kzo9I GATC 5 cut(s) 79, 167, 304, 547, 700
LguI GCTCTTC 1 cut(s) 666
LpnPI CCDG 9 cut(s) 126, 146, 294, 309, 387, 564, 606, 765, 825
Lsp1109I GCAGC 4 cut(s) 12, 37, 158, 848
LweI GCATC 1 cut(s) 227
MaeI CTAG 4 cut(s) 54, 810, 864, 868
MaeII ACGT 2 cut(s) 177, 846
MaeIII GTNAC 2 cut(s) 187, 639
MalI GATC 5 cut(s) 81, 169, 306, 549, 702
MboI GATC 5 cut(s) 79, 167, 304, 547, 700
MboII GAAGA 2 cut(s) 683, 734
MflI RGATCY 1 cut(s) 167
MhlI GDGCHC 2 cut(s) 244, 817
MlsI TGGCCA 1 cut(s) 75
MluCI AATT 8 cut(s) 8, 15, 69, 344, 631, 655, 755, 828
MluNI TGGCCA 1 cut(s) 75
MlyI GAGTC 1 cut(s) 449
MnlI CCTC 5 cut(s) 439, 579, 630, 804, 807
Mox20I TGGCCA 1 cut(s) 75
Mph1103I ATGCAT 1 cut(s) 607
MscI TGGCCA 1 cut(s) 75
MseI TTAA 1 cut(s) 369
MslI CAYNNNNRTG 2 cut(s) 468, 623
Msp20I TGGCCA 1 cut(s) 75
MspA1I CMGCKG 1 cut(s) 50
MvnI CGCG 1 cut(s) 526
MwoI GCNNNNNNNGC 2 cut(s) 224, 602
NdeII GATC 5 cut(s) 79, 167, 304, 547, 700
NlaIII CATG 2 cut(s) 80, 454
NlaIV GGNNCC 2 cut(s) 131, 169
NmuCI GTSAC 2 cut(s) 187, 639
NsiI ATGCAT 1 cut(s) 607
PceI AGGCCT 2 cut(s) 154, 724
PciSI GCTCTTC 1 cut(s) 666
PfeI GAWTC 1 cut(s) 480
PflMI CCANNNNNTGG 2 cut(s) 126, 588
PkrI GCNGC 4 cut(s) 27, 52, 148, 838
PleI GAGTC 1 cut(s) 449
PpsI GAGTC 1 cut(s) 449
Ppu21I YACGTR 1 cut(s) 847
Psp1406I AACGTT 1 cut(s) 177
PspN4I GGNNCC 2 cut(s) 131, 169
PspPI GGNCC 2 cut(s) 59, 782
PsuI RGATCY 1 cut(s) 167
PvuII CAGCTG 1 cut(s) 50
RsaI GTAC 3 cut(s) 578, 845, 849
RsaNI GTAC 3 cut(s) 577, 844, 848
RseI CAYNNNNRTG 2 cut(s) 468, 623
SapI GCTCTTC 1 cut(s) 666
SaqAI TTAA 1 cut(s) 369
SatI GCNGC 4 cut(s) 26, 51, 147, 837
Sau3AI GATC 5 cut(s) 79, 167, 304, 547, 700
Sau96I GGNCC 2 cut(s) 59, 782
SchI GAGTC 1 cut(s) 449
SduI GDGCHC 2 cut(s) 244, 817
SfaNI GCATC 1 cut(s) 227
SfcI CTRYAG 1 cut(s) 138
SinI GGWCC 2 cut(s) 59, 782
SmiMI CAYNNNNRTG 2 cut(s) 468, 623
SnaBI TACGTA 1 cut(s) 847
Sse9I AATT 8 cut(s) 8, 15, 69, 344, 631, 655, 755, 828
SseBI AGGCCT 2 cut(s) 154, 724
SspI AATATT 1 cut(s) 367
SspMI CTAG 4 cut(s) 54, 810, 864, 868
StuI AGGCCT 2 cut(s) 154, 724
StyI CCWWGG 1 cut(s) 709
TaaI ACNGT 3 cut(s) 256, 320, 786
TaiI ACGT 2 cut(s) 180, 849
TasI AATT 8 cut(s) 8, 15, 69, 344, 631, 655, 755, 828
TfiI GAWTC 1 cut(s) 480
Tru1I TTAA 1 cut(s) 369
Tru9I TTAA 1 cut(s) 369
TscAI CASTG 2 cut(s) 558, 625
TseFI GTSAC 2 cut(s) 187, 639
TseI GCWGC 4 cut(s) 25, 50, 146, 836
Tsp45I GTSAC 2 cut(s) 187, 639
TspDTI ATGAA 3 cut(s) 170, 196, 357
TspRI CASTG 2 cut(s) 558, 625
Van91I CCANNNNNTGG 2 cut(s) 126, 588
VneI GTGCAC 2 cut(s) 240, 813
VpaK11BI GGWCC 2 cut(s) 59, 782
XapI RAATTY 4 cut(s) 8, 344, 631, 755
XspI CTAG 4 cut(s) 54, 810, 864, 868
Zsp2I ATGCAT 1 cut(s) 607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.