Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0005544

Physical Location & Seq

Genomic Coordinates Forward (+)

54345110 .. 54347854

Gene Structure 2745 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G027020.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGGCCTATACTGGCCTGATCAAATGCGCAATATTGGTTTTAGCTCTTGTTGCTAGAGCCAATGCTATTCATATTTATCTTGATTGGGATGTGACCCTTGACAGCACTATCAAGCCTGTGTCTATGGATCAACCTGTCATCACCATAAATGGAAAGTTTCCAGGGCCTCTTATCAATGCCACAACCAATGACTTTGTTCATGTCAATGTCTTTAACAACATGGATGAGCCTCTACTATTTACATGGAATGGTATACAGCAAAGGCTAAACTCATGGCAAGATGGAGTTTCAGGAACAAATTGTCCGATTCTACCTGGTACAAACTGGACTTATGTGTTCCAAACCAAGGACCAGATTGGTAGCTTCTTCTACTTTCCATCCATCAACTTCCATAAGGCTGCTGGAGGGTTTGGAGCTATTCGTGTTATTAACCGCAAAGTCATTGCCGTCCCCTTCCCTGCACCAGAGGCAGAATTTGATCTCCTCATTGGTGATTGGTCTTATGACAGCTACAAGACAATTAGGTCACAGATGGATACTAGCGAGACGGCTTATTACACCTTTCCAGATATTATGTTGATGAATGGCAAAGGCCCTCTAGATAATCAAATGTCAAAAGACCATGAGTCCTTCGATGTCACACAAGGGAAGACATACAGGCTGAGAATATCAAATGTGGGGAATGCTGTGAGTTTCAATTTCAGGATTCAGAACCATCAAATGGTGTTGGTTGAAACAGAAGGGTCATATACTAATCAGATTACTTTGGATTCTCTGGATGTACATGTTGGTCAATCCTACTCAGTTCTTGTCACAGCAAATCAAGATGAGGCTGACTATTACATGGTGGCATCTCCCAAGCTGCTCAACACCTCTGATTTTAGCAGCCTGGTGGGCGTAGGGGTGTTGCACTATTCGAATTCTGTCTCAACAGTAGGCGGACCGCTGCCAGAAGGGCCTGACCCATTTGATGTCAATTTTTCGATGAATCAGGCCCGGTCTATTAGGTGGAACTTAACTGCTGGAGCTGCAAGGCCTAATCCACAAGGTAGCTTCAACGTCTCAAATGTGACCCTATCCCAAACCTTCGTCCTAGAAAGTACAGTGGCTCAAATTCATAATCTACCACGTTATGTTGTCAACAATGTGTCATATGACACTGTAACGACCCCGCTGAAACTCGCTGATTACTTTGTCAATGGTTCCGGTGTGTATCAACTTGATTCTTTTCCAGTGAAATCAGTCAACCCCGATGCTGGTTATGGAGTATTTGTAGTGACTGGAATCCACAAAGGGTGGATAGAAATAGTGTTTAAAAACAACCTGGCTGCCATGGATTCTTGGCATTTGGATGGTTACGGATTTTTTGTTGTTGGGTTCGGCATTGGAGATTGGACTACAGAATCACGGAGCACGTACAACCTCTACGATCCTGTTGTAAGATCAACCGTGCAAGTGTACCCGGGAGCATGGACTGCAGTGTATGCATTCCTAGACAACCCTGGAATGTGGAACTTGAGGTCACAACTACTGAAGCACTGGTACTTGGGACAAGAACTCTACGTACGAGTTTTTGATGCTGATCCTGACCCTGCTAAGGAGCGCCCGCCACCTGATAACCTCCTTCTATGTGGTAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009653 GO:0009826 GO:0009932 GO:0009987 GO:0016020 GO:0016043 GO:0016049 GO:0016491 GO:0016722 GO:0030054 GO:0030312 GO:0031090 GO:0031224 GO:0031225 GO:0031226 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046658 GO:0048046 GO:0048589 GO:0048856 GO:0048869 GO:0055044 GO:0055114 GO:0060560 GO:0071840 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

546

Amino Acids

60.76

Weight (kDa)

5.05

Isoelectric Point (pI)

32.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	38 - 145	3.1e-37	Multicopper oxidase
Cu-oxidase	PF00394	161 - 308	1.1e-39	Multicopper oxidase
Cu-oxidase_2	PF07731	393 - 526	1.3e-28	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005544)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g18341 FvH4_7g18350
malus_domestica	MD01G1098800.v1.1 MD01G1099000.v1.1 MD07G1165500.v1.1 MD07G1165800.v1.1
prunus_persica	Prupe.2G205500_v2.0.a1 Prupe.2G205600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0362061 RchiOBHm_Chr1g0362091 RchiOBHm_Chr7g0206161
rosa_laevigata	RLG00000027672 RLG00000027676
rosa_multiflora	Rmu_co8403161.1_g000001 Rmu_sc0010614.1_g000004
rosa_roxburghii	Rroxscaffold_4G00294510 Rroxscaffold_4G00294540
rosa_rugosa	Rorug01G0293200 Rorug01G0293600
rosa_samantha	Rh1BG266700 Rh1BG267000 Rh1CG284800 Rh1CG285100 Rh1DG296700 Rh1DG297100 Rh7DG233000
rosa_wichuraiana	Rw1G027020 Rw1G027050 Rw7G019480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	523
Acc16I	TGCGCA	1 cut(s)	28
AccB7I	CCANNNNNTGG	1 cut(s)	721
AccI	GTMKAC	1 cut(s)	253
AciI	CCGC	5 cut(s)	433, 939, 944, 1172, 1607
AclWI	GGATC	3 cut(s)	135, 1424, 1577
AcsI	RAATTY	3 cut(s)	473, 919, 1113
AcuI	CTGAAG	1 cut(s)	1553
AfaI	GTAC	7 cut(s)	319, 783, 1102, 1418, 1460, 1544, 1566
AfiI	CCNNNNNNNGG	4 cut(s)	346, 721, 1256, 1597
AflIII	ACRYGT	1 cut(s)	784
AgsI	TTSAA	3 cut(s)	697, 734, 1057
AhdI	GACNNNNNGTC	1 cut(s)	625
AjnI	CCWGG	5 cut(s)	160, 313, 888, 1323, 1501
AloI	GAACNNNNNNTCC	2 cut(s)	286, 318
AluBI	AGCT	7 cut(s)	44, 363, 416, 510, 862, 1028, 1053
AluI	AGCT	7 cut(s)	44, 363, 416, 510, 862, 1028, 1053
Alw21I	GWGCWC	1 cut(s)	1415
Alw26I	GTCTC	3 cut(s)	539, 931, 1066
AlwI	GGATC	3 cut(s)	135, 1424, 1577
Ama87I	CYCGRG	1 cut(s)	1462
AoxI	GGCC	7 cut(s)	3, 13, 164, 592, 956, 993, 1034
ApeKI	GCWGC	6 cut(s)	398, 862, 885, 946, 1028, 1328
ApoI	RAATTY	3 cut(s)	473, 919, 1113
AspLEI	GCGC	2 cut(s)	29, 1605
AspS9I	GGNCC	6 cut(s)	164, 349, 593, 941, 956, 994
AsuC2I	CCSGG	3 cut(s)	997, 1463, 1464
AsuHPI	GGTGA	2 cut(s)	133, 503
AsuII	TTCGAA	1 cut(s)	917
AvaI	CYCGRG	1 cut(s)	1462
AvaII	GGWCC	2 cut(s)	349, 941
BarI	GAAGNNNNNNTAC	2 cut(s)	1526, 1558
BbsI	GAAGAC	1 cut(s)	656
Bbv12I	GWGCWC	1 cut(s)	1415
BbvI	GCAGC	6 cut(s)	385, 849, 897, 933, 1015, 1315
BccI	CCATC	6 cut(s)	275, 385, 389, 526, 723, 1346
BceAI	ACGGC	2 cut(s)	431, 564
BciT130I	CCWGG	5 cut(s)	162, 315, 890, 1325, 1503
BciVI	GTATCC	1 cut(s)	529
BclI	TGATCA	1 cut(s)	18
BcnI	CCSGG	3 cut(s)	997, 1463, 1464
BcoDI	GTCTC	3 cut(s)	539, 931, 1066
BfaI	CTAG	6 cut(s)	54, 540, 599, 1094, 1493, 1639
BfmI	CTRYAG	2 cut(s)	1398, 1476
BfoI	RGCGCY	1 cut(s)	1606
BfuI	GTATCC	1 cut(s)	529
BglI	GCCNNNNNGGC	2 cut(s)	894, 955
BisI	GCNGC	6 cut(s)	399, 863, 886, 947, 1029, 1329
BlsI	GCNGC	6 cut(s)	400, 864, 887, 948, 1030, 1330
Bme1390I	CCNGG	8 cut(s)	162, 315, 890, 997, 1325, 1463, 1464, 1503
Bme18I	GGWCC	2 cut(s)	349, 941
BmeRI	GACNNNNNGTC	1 cut(s)	625
BmeT110I	CYCGRG	1 cut(s)	1462
BmgT120I	GGNCC	6 cut(s)	164, 349, 593, 941, 956, 994
BmiI	GGNNCC	1 cut(s)	1204
BmrFI	CCNGG	8 cut(s)	162, 315, 890, 997, 1325, 1463, 1464, 1503
BmsI	GCATC	3 cut(s)	860, 1243, 1567
BpiI	GAAGAC	1 cut(s)	656
BpmI	CTGGAG	2 cut(s)	423, 1044
Bpu10I	CCTNAGC	1 cut(s)	1596
Bpu14I	TTCGAA	1 cut(s)	917
BpuEI	CTTGAG	1 cut(s)	1537
BpuMI	CCSGG	3 cut(s)	997, 1463, 1464
BsaAI	YACGTR	2 cut(s)	1416, 1564
BsaBI	GATNNNNATC	1 cut(s)	1581
BsaJI	CCNNGG	5 cut(s)	161, 345, 1332, 1462, 1501
BsaWI	WCCGGW	1 cut(s)	1205
BsaXI	ACNNNNNCTCC	2 cut(s)	1257, 1287
Bsc4I	CCNNNNNNNGG	4 cut(s)	346, 721, 1256, 1597
Bse1I	ACTGG	5 cut(s)	16, 329, 1232, 1285, 1544
Bse3DI	GCAATG	1 cut(s)	441
Bse8I	GATNNNNATC	1 cut(s)	1581
BseBI	CCWGG	5 cut(s)	162, 315, 890, 1325, 1503
BseDI	CCNNGG	5 cut(s)	161, 345, 1332, 1462, 1501
BseGI	GGATG	5 cut(s)	94, 229, 377, 784, 1357
BseJI	GATNNNNATC	1 cut(s)	1581
BseLI	CCNNNNNNNGG	4 cut(s)	346, 721, 1256, 1597
BseMI	GCAATG	1 cut(s)	441
BseMII	CTCAG	2 cut(s)	653, 816
BseNI	ACTGG	5 cut(s)	16, 329, 1232, 1285, 1544
BseRI	GAGGAG	1 cut(s)	473
BseXI	GCAGC	6 cut(s)	385, 849, 897, 933, 1015, 1315
BsgI	GTGCAG	1 cut(s)	444
BshFI	GGCC	7 cut(s)	5, 15, 166, 594, 958, 995, 1036
BsiHKAI	GWGCWC	1 cut(s)	1415
BsiHKCI	CYCGRG	1 cut(s)	1462
BsiSI	CCGG	3 cut(s)	997, 1206, 1463
BsiWI	CGTACG	1 cut(s)	1564
BslFI	GGGAC	2 cut(s)	434, 1563
BslI	CCNNNNNNNGG	4 cut(s)	346, 721, 1256, 1597
BsmAI	GTCTC	3 cut(s)	539, 931, 1066
BsmBI	CGTCTC	2 cut(s)	539, 1066
BsmFI	GGGAC	2 cut(s)	434, 1563
BsmI	GAATGC	2 cut(s)	688, 1487
BsnI	GGCC	7 cut(s)	5, 15, 166, 594, 958, 995, 1036
BsoBI	CYCGRG	1 cut(s)	1462
Bsp119I	TTCGAA	1 cut(s)	917
Bsp1286I	GDGCHC	1 cut(s)	1415
Bsp1407I	TGTACA	1 cut(s)	781
Bsp143I	GATC	6 cut(s)	18, 127, 478, 1429, 1442, 1582
Bsp19I	CCATGG	1 cut(s)	1332
BspACI	CCGC	5 cut(s)	433, 939, 944, 1172, 1607
BspANI	GGCC	7 cut(s)	5, 15, 166, 594, 958, 995, 1036
BspCNI	CTCAG	2 cut(s)	654, 815
BspLI	GGNNCC	1 cut(s)	1204
BspMAI	CTGCAG	1 cut(s)	1480
BspPI	GGATC	3 cut(s)	135, 1424, 1577
BspT104I	TTCGAA	1 cut(s)	917
BsrDI	GCAATG	1 cut(s)	441
BsrGI	TGTACA	1 cut(s)	781
BsrI	ACTGG	5 cut(s)	16, 329, 1232, 1285, 1544
BssECI	CCNNGG	5 cut(s)	161, 345, 1332, 1462, 1501
BssMI	GATC	6 cut(s)	18, 127, 478, 1429, 1442, 1582
BssNAI	GTATAC	1 cut(s)	254
BssT1I	CCWWGG	2 cut(s)	345, 1332
Bst1107I	GTATAC	1 cut(s)	254
Bst2UI	CCWGG	5 cut(s)	162, 315, 890, 1325, 1503
Bst4CI	ACNGT	4 cut(s)	934, 1105, 1162, 1450
BstAPI	GCANNNNNTGC	2 cut(s)	1475, 1484
BstAUI	TGTACA	1 cut(s)	781
BstBAI	YACGTR	2 cut(s)	1416, 1564
BstBI	TTCGAA	1 cut(s)	917
BstC8I	GCNNGC	1 cut(s)	1607
BstDEI	CTNAG	3 cut(s)	662, 802, 1596
BstDSI	CCRYGG	1 cut(s)	1332
BstF5I	GGATG	5 cut(s)	94, 229, 377, 784, 1357
BstH2I	RGCGCY	1 cut(s)	1606
BstHHI	GCGC	2 cut(s)	29, 1605
BstKTI	GATC	6 cut(s)	21, 130, 481, 1432, 1445, 1585
BstMAI	GTCTC	3 cut(s)	539, 931, 1066
BstMBI	GATC	6 cut(s)	18, 127, 478, 1429, 1442, 1582
BstMWI	GCNNNNNNNGC	7 cut(s)	50, 467, 894, 955, 1028, 1475, 1484
BstNI	CCWGG	5 cut(s)	162, 315, 890, 1325, 1503
BstNSI	RCATGY	1 cut(s)	788
BstSCI	CCNGG	8 cut(s)	160, 313, 888, 995, 1323, 1461, 1462, 1501
BstSFI	CTRYAG	2 cut(s)	1398, 1476
BstSNI	TACGTA	1 cut(s)	1564
BstV1I	GCAGC	6 cut(s)	385, 849, 897, 933, 1015, 1315
BstV2I	GAAGAC	1 cut(s)	656
BstZ17I	GTATAC	1 cut(s)	254
BsuI	GTATCC	1 cut(s)	529
BsuRI	GGCC	7 cut(s)	5, 15, 166, 594, 958, 995, 1036
BtgI	CCRYGG	1 cut(s)	1332
BtsCI	GGATG	5 cut(s)	94, 229, 377, 784, 1357
BtsI	GCAGTG	1 cut(s)	1485
BtsIMutI	CAGTG	5 cut(s)	1110, 1158, 1239, 1485, 1537
Cac8I	GCNNGC	1 cut(s)	1607
CfoI	GCGC	2 cut(s)	29, 1605
Cfr13I	GGNCC	6 cut(s)	164, 349, 593, 941, 956, 994
Cfr9I	CCCGGG	1 cut(s)	1462
CpoI	CGGWCCG	1 cut(s)	941
CsiI	ACCWGGT	1 cut(s)	313
Csp6I	GTAC	7 cut(s)	318, 782, 1101, 1417, 1459, 1543, 1565
CspI	CGGWCCG	1 cut(s)	941
CviAII	CATG	9 cut(s)	200, 220, 243, 273, 623, 785, 844, 1333, 1470
CviQI	GTAC	7 cut(s)	318, 782, 1101, 1417, 1459, 1543, 1565
DdeI	CTNAG	3 cut(s)	662, 802, 1596
DpnI	GATC	6 cut(s)	20, 129, 480, 1431, 1444, 1584
DpnII	GATC	6 cut(s)	18, 127, 478, 1429, 1442, 1582
DraI	TTTAAA	1 cut(s)	1315
DrdI	GACNNNNNNGTC	1 cut(s)	523
DriI	GACNNNNNGTC	1 cut(s)	625
DseDI	GACNNNNNNGTC	1 cut(s)	523
Eam1105I	GACNNNNNGTC	1 cut(s)	625
EciI	GGCGGA	1 cut(s)	954
Eco105I	TACGTA	1 cut(s)	1564
Eco130I	CCWWGG	2 cut(s)	345, 1332
Eco147I	AGGCCT	1 cut(s)	1036
Eco47I	GGWCC	2 cut(s)	349, 941
Eco57I	CTGAAG	1 cut(s)	1553
Eco88I	CYCGRG	1 cut(s)	1462
EcoO109I	RGGNCCY	3 cut(s)	164, 593, 956
EcoRI	GAATTC	1 cut(s)	919
EcoRII	CCWGG	5 cut(s)	160, 313, 888, 1323, 1501
EcoT14I	CCWWGG	2 cut(s)	345, 1332
EcoT22I	ATGCAT	1 cut(s)	1489
ErhI	CCWWGG	2 cut(s)	345, 1332
Esp3I	CGTCTC	2 cut(s)	539, 1066
FaeI	CATG	9 cut(s)	203, 223, 246, 276, 626, 788, 847, 1336, 1473
FaqI	GGGAC	2 cut(s)	434, 1563
FatI	CATG	9 cut(s)	199, 219, 242, 272, 622, 784, 843, 1332, 1469
FauI	CCCGC	2 cut(s)	1179, 1614
FauNDI	CATATG	1 cut(s)	1153
FbaI	TGATCA	1 cut(s)	18
FblI	GTMKAC	1 cut(s)	253
Fnu4HI	GCNGC	6 cut(s)	399, 863, 886, 947, 1029, 1329
FokI	GGATG	5 cut(s)	101, 236, 364, 791, 1364
Fsp4HI	GCNGC	6 cut(s)	399, 863, 886, 947, 1029, 1329
FspBI	CTAG	6 cut(s)	54, 540, 599, 1094, 1493, 1639
FspI	TGCGCA	1 cut(s)	28
GlaI	GCGC	2 cut(s)	28, 1604
GluI	GCNGC	6 cut(s)	399, 863, 886, 947, 1029, 1329
GsuI	CTGGAG	2 cut(s)	423, 1044
HaeII	RGCGCY	1 cut(s)	1606
HaeIII	GGCC	7 cut(s)	5, 15, 166, 594, 958, 995, 1036
HapII	CCGG	3 cut(s)	997, 1206, 1463
HhaI	GCGC	2 cut(s)	29, 1605
Hin1II	CATG	9 cut(s)	203, 223, 246, 276, 626, 788, 847, 1336, 1473
Hin6I	GCGC	2 cut(s)	27, 1603
HinP1I	GCGC	2 cut(s)	27, 1603
HincII	GTYRAC	2 cut(s)	1141, 1246
HindII	GTYRAC	2 cut(s)	1141, 1246
HinfI	GANTC	9 cut(s)	307, 626, 706, 770, 988, 1223, 1284, 1337, 1403
HpaII	CCGG	3 cut(s)	997, 1206, 1463
HphI	GGTGA	2 cut(s)	133, 503
Hpy166II	GTNNAC	4 cut(s)	254, 1141, 1246, 1459
Hpy188I	TCNGA	4 cut(s)	306, 711, 759, 877
Hpy188III	TCNNGA	8 cut(s)	80, 291, 566, 599, 703, 776, 824, 1586
Hpy8I	GTNNAC	4 cut(s)	254, 1141, 1246, 1459
HpyAV	CCTTC	6 cut(s)	463, 640, 734, 947, 1096, 1634
HpyCH4III	ACNGT	4 cut(s)	934, 1105, 1162, 1450
HpyCH4IV	ACGT	4 cut(s)	1059, 1129, 1415, 1563
HpyCH4V	TGCA	6 cut(s)	461, 910, 1031, 1453, 1478, 1487
HpyF10VI	GCNNNNNNNGC	7 cut(s)	50, 467, 894, 955, 1028, 1475, 1484
HpyF3I	CTNAG	3 cut(s)	662, 802, 1596
HpySE526I	ACGT	4 cut(s)	1059, 1129, 1415, 1563
Hsp92II	CATG	9 cut(s)	203, 223, 246, 276, 626, 788, 847, 1336, 1473
HspAI	GCGC	2 cut(s)	27, 1603
Ksp22I	TGATCA	1 cut(s)	18
Kzo9I	GATC	6 cut(s)	18, 127, 478, 1429, 1442, 1582
LmnI	GCTCC	5 cut(s)	413, 1025, 1410, 1466, 1600
Lsp1109I	GCAGC	6 cut(s)	385, 849, 897, 933, 1015, 1315
LweI	GCATC	3 cut(s)	860, 1243, 1567
MabI	ACCWGGT	1 cut(s)	313
MaeI	CTAG	6 cut(s)	54, 540, 599, 1094, 1493, 1639
MaeII	ACGT	4 cut(s)	1059, 1129, 1415, 1563
MalI	GATC	6 cut(s)	20, 129, 480, 1431, 1444, 1584
MboI	GATC	6 cut(s)	18, 127, 478, 1429, 1442, 1582
MboII	GAAGA	2 cut(s)	358, 661
MhlI	GDGCHC	1 cut(s)	1415
MluCI	AATT	7 cut(s)	298, 473, 519, 697, 919, 976, 1113
MlyI	GAGTC	1 cut(s)	635
Mph1103I	ATGCAT	1 cut(s)	1489
MseI	TTAA	4 cut(s)	213, 429, 1016, 1314
MslI	CAYNNNNRTG	2 cut(s)	204, 1350
MspA1I	CMGCKG	2 cut(s)	946, 1174
MspI	CCGG	3 cut(s)	997, 1206, 1463
MspR9I	CCNGG	8 cut(s)	162, 315, 890, 997, 1325, 1463, 1464, 1503
Mva1269I	GAATGC	2 cut(s)	688, 1487
MvaI	CCWGG	5 cut(s)	162, 315, 890, 1325, 1503
MwoI	GCNNNNNNNGC	7 cut(s)	50, 467, 894, 955, 1028, 1475, 1484
NciI	CCSGG	3 cut(s)	997, 1463, 1464
NcoI	CCATGG	1 cut(s)	1332
NdeI	CATATG	1 cut(s)	1153
NdeII	GATC	6 cut(s)	18, 127, 478, 1429, 1442, 1582
NlaIII	CATG	9 cut(s)	203, 223, 246, 276, 626, 788, 847, 1336, 1473
NlaIV	GGNNCC	1 cut(s)	1204
NmuCI	GTSAC	7 cut(s)	91, 525, 637, 811, 1069, 1276, 1521
NsbI	TGCGCA	1 cut(s)	28
NsiI	ATGCAT	1 cut(s)	1489
NspI	RCATGY	1 cut(s)	788
NspV	TTCGAA	1 cut(s)	917
PceI	AGGCCT	1 cut(s)	1036
PciI	ACATGT	1 cut(s)	784
PctI	GAATGC	2 cut(s)	688, 1487
PfeI	GAWTC	8 cut(s)	307, 706, 770, 988, 1223, 1284, 1337, 1403
Pfl23II	CGTACG	1 cut(s)	1564
PflMI	CCANNNNNTGG	1 cut(s)	721
PkrI	GCNGC	6 cut(s)	400, 864, 887, 948, 1030, 1330
PleI	GAGTC	1 cut(s)	634
PpsI	GAGTC	1 cut(s)	634
Ppu21I	YACGTR	2 cut(s)	1416, 1564
PscI	ACATGT	1 cut(s)	784
Psp6I	CCWGG	5 cut(s)	160, 313, 888, 1323, 1501
PspGI	CCWGG	5 cut(s)	160, 313, 888, 1323, 1501
PspLI	CGTACG	1 cut(s)	1564
PspN4I	GGNNCC	1 cut(s)	1204
PspPI	GGNCC	6 cut(s)	164, 349, 593, 941, 956, 994
PsrI	GAACNNNNNNTAC	2 cut(s)	1548, 1580
PstI	CTGCAG	1 cut(s)	1480
RsaI	GTAC	7 cut(s)	319, 783, 1102, 1418, 1460, 1544, 1566
RsaNI	GTAC	7 cut(s)	318, 782, 1101, 1417, 1459, 1543, 1565
RseI	CAYNNNNRTG	2 cut(s)	204, 1350
Rsr2I	CGGWCCG	1 cut(s)	941
RsrII	CGGWCCG	1 cut(s)	941
SaqAI	TTAA	4 cut(s)	213, 429, 1016, 1314
SatI	GCNGC	6 cut(s)	399, 863, 886, 947, 1029, 1329
Sau3AI	GATC	6 cut(s)	18, 127, 478, 1429, 1442, 1582
Sau96I	GGNCC	6 cut(s)	164, 349, 593, 941, 956, 994
SchI	GAGTC	1 cut(s)	635
ScrFI	CCNGG	8 cut(s)	162, 315, 890, 997, 1325, 1463, 1464, 1503
SduI	GDGCHC	1 cut(s)	1415
SexAI	ACCWGGT	1 cut(s)	313
SfaNI	GCATC	3 cut(s)	860, 1243, 1567
SfcI	CTRYAG	2 cut(s)	1398, 1476
SfuI	TTCGAA	1 cut(s)	917
SinI	GGWCC	2 cut(s)	349, 941
SmaI	CCCGGG	1 cut(s)	1464
SmiMI	CAYNNNNRTG	2 cut(s)	204, 1350
SmlI	CTYRAG	1 cut(s)	1516
SmoI	CTYRAG	1 cut(s)	1516
SnaBI	TACGTA	1 cut(s)	1564
Sse9I	AATT	7 cut(s)	298, 473, 519, 697, 919, 976, 1113
SseBI	AGGCCT	1 cut(s)	1036
SsiI	CCGC	5 cut(s)	433, 939, 944, 1172, 1607
SspI	AATATT	1 cut(s)	33
SspMI	CTAG	6 cut(s)	54, 540, 599, 1094, 1493, 1639
StuI	AGGCCT	1 cut(s)	1036
StyD4I	CCNGG	8 cut(s)	160, 313, 888, 995, 1323, 1461, 1462, 1501
StyI	CCWWGG	2 cut(s)	345, 1332
TaaI	ACNGT	4 cut(s)	934, 1105, 1162, 1450
TaiI	ACGT	4 cut(s)	1062, 1132, 1418, 1566
TaqI	TCGA	3 cut(s)	633, 917, 983
TasI	AATT	7 cut(s)	298, 473, 519, 697, 919, 976, 1113
TatI	WGTACW	2 cut(s)	781, 1100
TfiI	GAWTC	8 cut(s)	307, 706, 770, 988, 1223, 1284, 1337, 1403
Tru1I	TTAA	4 cut(s)	213, 429, 1016, 1314
Tru9I	TTAA	4 cut(s)	213, 429, 1016, 1314
TscAI	CASTG	5 cut(s)	1110, 1165, 1239, 1485, 1544
TseFI	GTSAC	7 cut(s)	91, 525, 637, 811, 1069, 1276, 1521
TseI	GCWGC	6 cut(s)	398, 862, 885, 946, 1028, 1328
Tsp45I	GTSAC	7 cut(s)	91, 525, 637, 811, 1069, 1276, 1521
TspDTI	ATGAA	5 cut(s)	59, 188, 596, 1001, 1106
TspGWI	ACGGA	2 cut(s)	1374, 1423
TspMI	CCCGGG	1 cut(s)	1462
TspRI	CASTG	5 cut(s)	1110, 1165, 1239, 1485, 1544
Van91I	CCANNNNNTGG	1 cut(s)	721
VpaK11BI	GGWCC	2 cut(s)	349, 941
XapI	RAATTY	3 cut(s)	473, 919, 1113
XbaI	TCTAGA	1 cut(s)	598
XceI	RCATGY	1 cut(s)	788
XcmI	CCANNNNNNNNNTGG	1 cut(s)	398
XmaI	CCCGGG	1 cut(s)	1462
XmiI	GTMKAC	1 cut(s)	253
XspI	CTAG	6 cut(s)	54, 540, 599, 1094, 1493, 1639
Zsp2I	ATGCAT	1 cut(s)	1489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.