Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0005544

Physical Location & Seq

Genomic Coordinates Reverse (-)

13818340 .. 13829635

Gene Structure 11296 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027672

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGGCATCAAAGTCTGGAAGTGATCGCCGTTGTCCATGGCTGATTCTCCCTGCAACTCTTCTCATTGTCCTCCTTGCCTATGGAGCTCATGCTGTGGACATTTTTCTTCAATGGGACGTCGCCGTCAATACGAGCATCAGACCTGCATCCGTGGACCAACCGGTGATTACAATCAATGGGAAGTTTCCAGGGCCGCTTATCAACGCCACAACCAATGATATTGTTCATGTTAATGTGTTTAATCATATGGATGAAGACCTGCTCATAACATGGAATGGGATACAACAAAGGCTAAACTCTTGGCAAGATGGAGTTTCCGGAACAAATTGTCCCATTCAGCCTTTTACAAACTGGACGTATGTGTTCCAACTCAAGGATCAAATTGGTACTTTTTCCTACTTTCCTTCCATCAACTTCCTCAAAGCTGGTGGGGGATTCGGTCCGATTCAGATCCATAATCGTCCCGTTGTCCAAGTTCCATATCTGAAACCGGAAGCCGAGTTCGATCTTCTCATTGGTGATTGGTATGAGACGAGTTACAAGGATCTTAGGTCCATACTCAGCAGCAAGCAAATGGCCGCCTACAATAGTACCCCTGATAAAATCTTGATGAATGGAAAAGGATCATACGGGGATCCTCTAACAAAGGCGTATGAGTCCTTCACTGTTACACCAGGGAAGACATACCTAATTAGGATATCAAATGTTGGAAGTGCGTGGAGTTTGAATTTCTTGATTCAAAATCATCGAATGGTGCTGGTTGAAACAGAAGGATCCTATACTAATGAAATCACCTTGGATTCTCTTGATATACATGTTGGACAGTCCTACTCTGTGCTTGTCACAGCTGATCAAGCCACTTCAGACTATTACATGGTAGCAACTCCTAAATTGCTTAAAATCACAGATACGACCAAATTTGGAATTGGTGTGCTGCACTATGATAGCTCCACCACAGCTGCTAGTGGACCTCTACCAATTGGCCCTGACCCTTTTGATATAGAACTATCCATCAATCAAGCCAACTCCATCAGGTGGAACCTGACTACAGGGGCAGCAAGGCCTAATCCACAAGGATCCTTCAACGTTCATAATGTGACACTATCACAGACATTCATACTAAGTGCATCAACAGCAGAGATTGATGGTGCACCCAAGTTTACTGTCAACAATGTGTCTTACTTAACCCCAGATACACCATTGAAGTTGGCTGATCACTTGGTCAACGGTTCTGGAGTTTACGAGCTTGATGAATTCTCTACTAACTCTACAAATGTTAAACCTGAGCGTGGAGTTTTTGTTGCAAGTGGGATACACAATGGGTGGATAGAACTTGTTTTCCACAATGATTTGGAGGTCATGGACTCTTGGCATTTGGATGGCTTCGGATTCTTTGTTGTTGGCTACGGCCGTGGAAAGTGGAGTGCTAAGTCGCGCTCAACCTACAACCTTTATGATCCAGTGGTGCGTTCTACTGTACAAGTGTACCCACGGAGGTGGAGTGCGGAAAATTTGCCCCGCCCACTCCTCCTTCTGGACCGTCTGCGCCTCCTCCAAAGCATTCTAGTGCACCATCTTTGCAAATTACAGCAGCAGGGTCTCATATTGCTGTTATCTGCATTGTCTCAGCATTCATTCAAATATCCAGAGTATCGGACCTGCATCTGTGGACCAACCGGCTTCATGGCTCTCTGCTTTCTACGACAGACCTTCGATTTTTTCCAGGAAGTGTTTAGTGGTTTGAGATTGTGTAAAGTTTCAGAGAGGAATTGGACATATTCATTTACTATCCCTGAAGAAAAAAAGAATGCGATACAAAAACTATTACTGCTGGGAAGATGGAGTTTGAGGCACAAATTGCCTATTCTGCCATATCATACCGGGATCAATCCTCTCACAAAAGCCTGTGAAACCTCATGTGTTGCACCAGGGAAGACATACCTAATTAGGATATCCAATGTTGGGAGTGCATGGAGTTTCAATTTCATGATTAAAACATCATCGAATGGTGCTGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

673

Amino Acids

74.96

Weight (kDa)

7.62

Isoelectric Point (pI)

34.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	46 - 154	6e-36	Multicopper oxidase
Cu-oxidase	PF00394	170 - 316	1.1e-40	Multicopper oxidase
Cu-oxidase_2	PF07731	399 - 501	8.1e-18	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005544)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g18341 FvH4_7g18350
malus_domestica	MD01G1098800.v1.1 MD01G1099000.v1.1 MD07G1165500.v1.1 MD07G1165800.v1.1
prunus_persica	Prupe.2G205500_v2.0.a1 Prupe.2G205600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0362061 RchiOBHm_Chr1g0362091 RchiOBHm_Chr7g0206161
rosa_laevigata	RLG00000027672 RLG00000027676
rosa_multiflora	Rmu_co8403161.1_g000001 Rmu_sc0010614.1_g000004
rosa_roxburghii	Rroxscaffold_4G00294510 Rroxscaffold_4G00294540
rosa_rugosa	Rorug01G0293200 Rorug01G0293600
rosa_samantha	Rh1BG266700 Rh1BG267000 Rh1CG284800 Rh1CG285100 Rh1DG296700 Rh1DG297100 Rh7DG233000
rosa_wichuraiana	Rw1G027020 Rw1G027050 Rw7G019480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	122
AatII	GACGTC	1 cut(s)	120
Acc36I	ACCTGC	3 cut(s)	151, 267, 1667
AccB7I	CCANNNNNTGG	1 cut(s)	1035
AccII	CGCG	1 cut(s)	1435
AccIII	TCCGGA	1 cut(s)	317
AciI	CCGC	4 cut(s)	194, 579, 1505, 1519
AclI	AACGTT	1 cut(s)	1086
AcoI	YGGCCR	2 cut(s)	576, 1408
AcsI	RAATTY	4 cut(s)	727, 917, 1253, 1510
AcuI	CTGAAG	2 cut(s)	846, 1815
AcyI	GRCGYC	1 cut(s)	117
AfaI	GTAC	4 cut(s)	388, 592, 1479, 1487
AfiI	CCNNNNNNNGG	5 cut(s)	373, 1035, 1289, 1534, 1962
AflIII	ACRYGT	1 cut(s)	814
AgeI	ACCGGT	1 cut(s)	160
AgsI	TTSAA	8 cut(s)	110, 727, 740, 764, 1084, 1204, 1639, 1981
AjnI	CCWGG	4 cut(s)	187, 673, 1722, 1927
AleI	CACNNNNGTG	1 cut(s)	1495
AloI	GAACNNNNNNTCC	6 cut(s)	313, 345, 485, 517, 1323, 1355
AluBI	AGCT	6 cut(s)	86, 425, 848, 948, 959, 1246
AluI	AGCT	6 cut(s)	86, 425, 848, 948, 959, 1246
Alw21I	GWGCWC	3 cut(s)	88, 1153, 1572
Alw26I	GTCTC	3 cut(s)	524, 1604, 1629
Alw44I	GTGCAC	2 cut(s)	1149, 1568
Aor13HI	TCCGGA	1 cut(s)	317
AoxI	GGCC	5 cut(s)	191, 576, 982, 1061, 1408
ApaLI	GTGCAC	2 cut(s)	1149, 1568
ApeKI	GCWGC	5 cut(s)	564, 934, 959, 1055, 1591
ApoI	RAATTY	4 cut(s)	727, 917, 1253, 1510
AsiGI	ACCGGT	1 cut(s)	160
AspLEI	GCGC	2 cut(s)	1437, 1548
AspS9I	GGNCC	9 cut(s)	154, 191, 440, 552, 968, 983, 1537, 1656, 1670
AsuC2I	CCSGG	1 cut(s)	1882
AsuHPI	GGTGA	3 cut(s)	175, 530, 784
AvaII	GGWCC	7 cut(s)	154, 440, 552, 968, 1537, 1656, 1670
BaeGI	GKGCMC	2 cut(s)	1153, 1572
BaeI	ACNNNNGTAYC	4 cut(s)	574, 607, 1469, 1502
BamHI	GGATCC	3 cut(s)	634, 773, 1076
BanII	GRGCYC	1 cut(s)	88
BarI	GAAGNNNNNNTAC	2 cut(s)	644, 676
BbsI	GAAGAC	3 cut(s)	261, 686, 1940
Bbv12I	GWGCWC	3 cut(s)	88, 1153, 1572
BbvI	GCAGC	5 cut(s)	576, 921, 946, 1067, 1603
BccI	CCATC	8 cut(s)	302, 416, 1019, 1037, 1139, 1373, 1581, 1833
BceAI	ACGGC	4 cut(s)	12, 107, 1395, 1423
BciT130I	CCWGG	4 cut(s)	189, 675, 1724, 1929
BciVI	GTATCC	2 cut(s)	273, 1305
BclI	TGATCA	2 cut(s)	850, 1213
BcnI	CCSGG	1 cut(s)	1882
BcoDI	GTCTC	3 cut(s)	524, 1604, 1629
BfaI	CTAG	2 cut(s)	963, 1565
BfmI	CTRYAG	1 cut(s)	1047
BfuAI	ACCTGC	3 cut(s)	151, 267, 1667
BfuI	GTATCC	2 cut(s)	273, 1305
BisI	GCNGC	7 cut(s)	194, 565, 579, 935, 960, 1056, 1592
BlsI	GCNGC	7 cut(s)	195, 566, 580, 936, 961, 1057, 1593
Bme1390I	CCNGG	5 cut(s)	189, 675, 1724, 1882, 1929
Bme18I	GGWCC	7 cut(s)	154, 440, 552, 968, 1537, 1656, 1670
BmgT120I	GGNCC	9 cut(s)	154, 191, 440, 552, 968, 983, 1537, 1656, 1670
BmiI	GGNNCC	4 cut(s)	636, 775, 1040, 1078
BmrFI	CCNGG	5 cut(s)	189, 675, 1724, 1882, 1929
BmsI	GCATC	5 cut(s)	14, 144, 155, 1136, 1671
BpiI	GAAGAC	3 cut(s)	261, 686, 1940
BpmI	CTGGAG	1 cut(s)	1254
Bpu10I	CCTNAGC	1 cut(s)	1284
BpuEI	CTTGAG	1 cut(s)	356
BpuMI	CCSGG	1 cut(s)	1882
BsaBI	GATNNNNATC	2 cut(s)	170, 449
BsaHI	GRCGYC	1 cut(s)	117
BsaI	GGTCTC	1 cut(s)	1604
BsaJI	CCNNGG	8 cut(s)	35, 150, 188, 674, 795, 1411, 1490, 1928
BsaWI	WCCGGW	3 cut(s)	160, 317, 490
BsaXI	ACNNNNNCTCC	4 cut(s)	1284, 1314, 1486, 1516
Bsc4I	CCNNNNNNNGG	5 cut(s)	373, 1035, 1289, 1534, 1962
Bse118I	RCCGGY	2 cut(s)	160, 1676
Bse1I	ACTGG	2 cut(s)	356, 1460
Bse8I	GATNNNNATC	2 cut(s)	170, 449
BseAI	TCCGGA	1 cut(s)	317
BseBI	CCWGG	4 cut(s)	189, 675, 1724, 1929
BseDI	CCNNGG	8 cut(s)	35, 150, 188, 674, 795, 1411, 1490, 1928
BseGI	GGATG	3 cut(s)	146, 256, 1384
BseJI	GATNNNNATC	2 cut(s)	170, 449
BseLI	CCNNNNNNNGG	5 cut(s)	373, 1035, 1289, 1534, 1962
BseMII	CTCAG	3 cut(s)	574, 1275, 1640
BseNI	ACTGG	2 cut(s)	356, 1460
BseRI	GAGGAG	2 cut(s)	1517, 1541
BseSI	GKGCMC	2 cut(s)	1153, 1572
BseX3I	CGGCCG	1 cut(s)	1408
BseXI	GCAGC	5 cut(s)	576, 921, 946, 1067, 1603
BseYI	CCCAGC	1 cut(s)	1831
BsgI	GTGCAG	1 cut(s)	920
Bsh1236I	CGCG	1 cut(s)	1435
Bsh1285I	CGRYCG	1 cut(s)	1411
BshFI	GGCC	5 cut(s)	193, 578, 984, 1063, 1410
BshTI	ACCGGT	1 cut(s)	160
BsiEI	CGRYCG	1 cut(s)	1411
BsiHKAI	GWGCWC	3 cut(s)	88, 1153, 1572
BsiSI	CCGG	5 cut(s)	161, 318, 491, 1677, 1881
BslFI	GGGAC	3 cut(s)	128, 315, 447
BslI	CCNNNNNNNGG	5 cut(s)	373, 1035, 1289, 1534, 1962
BsmAI	GTCTC	3 cut(s)	524, 1604, 1629
BsmBI	CGTCTC	1 cut(s)	524
BsmFI	GGGAC	3 cut(s)	128, 315, 447
BsmI	GAATGC	3 cut(s)	1560, 1630, 1813
BsnI	GGCC	5 cut(s)	193, 578, 984, 1063, 1410
Bso31I	GGTCTC	1 cut(s)	1604
Bsp1286I	GDGCHC	3 cut(s)	88, 1153, 1572
Bsp13I	TCCGGA	1 cut(s)	317
Bsp1407I	TGTACA	1 cut(s)	1477
Bsp19I	CCATGG	1 cut(s)	35
BspACI	CCGC	4 cut(s)	194, 579, 1505, 1519
BspANI	GGCC	5 cut(s)	193, 578, 984, 1063, 1410
BspCNI	CTCAG	3 cut(s)	573, 1276, 1639
BspEI	TCCGGA	1 cut(s)	317
BspFNI	CGCG	1 cut(s)	1435
BspHI	TCATGA	1 cut(s)	1986
BspLI	GGNNCC	4 cut(s)	636, 775, 1040, 1078
BspMI	ACCTGC	3 cut(s)	151, 267, 1667
BspTNI	GGTCTC	1 cut(s)	1604
BsrFI	RCCGGY	2 cut(s)	160, 1676
BsrGI	TGTACA	1 cut(s)	1477
BsrI	ACTGG	2 cut(s)	356, 1460
BssAI	RCCGGY	2 cut(s)	160, 1676
BssECI	CCNNGG	8 cut(s)	35, 150, 188, 674, 795, 1411, 1490, 1928
BssNI	GRCGYC	1 cut(s)	117
BssT1I	CCWWGG	2 cut(s)	35, 795
Bst2UI	CCWGG	4 cut(s)	189, 675, 1724, 1929
Bst4CI	ACNGT	6 cut(s)	667, 825, 1165, 1229, 1477, 1541
Bst6I	CTCTTC	1 cut(s)	63
BstACI	GRCGYC	1 cut(s)	117
BstAPI	GCANNNNNTGC	1 cut(s)	1858
BstAUI	TGTACA	1 cut(s)	1477
BstC8I	GCNNGC	1 cut(s)	569
BstDEI	CTNAG	6 cut(s)	548, 560, 1121, 1284, 1428, 1626
BstDSI	CCRYGG	4 cut(s)	35, 150, 1411, 1490
BstF5I	GGATG	3 cut(s)	146, 256, 1384
BstFNI	CGCG	1 cut(s)	1435
BstHHI	GCGC	2 cut(s)	1437, 1548
BstMAI	GTCTC	3 cut(s)	524, 1604, 1629
BstMCI	CGRYCG	1 cut(s)	1411
BstMWI	GCNNNNNNNGC	5 cut(s)	83, 854, 1133, 1858, 1867
BstNI	CCWGG	4 cut(s)	189, 675, 1724, 1929
BstNSI	RCATGY	1 cut(s)	818
BstSCI	CCNGG	5 cut(s)	187, 673, 1722, 1880, 1927
BstSFI	CTRYAG	1 cut(s)	1047
BstSLI	GKGCMC	2 cut(s)	1153, 1572
BstUI	CGCG	1 cut(s)	1435
BstV1I	GCAGC	5 cut(s)	576, 921, 946, 1067, 1603
BstV2I	GAAGAC	3 cut(s)	261, 686, 1940
BstX2I	RGATCY	5 cut(s)	450, 544, 634, 773, 1076
BstXI	CCANNNNNNTGG	1 cut(s)	1497
BstYI	RGATCY	5 cut(s)	450, 544, 634, 773, 1076
BstZI	CGGCCG	1 cut(s)	1408
BsuI	GTATCC	2 cut(s)	273, 1305
BsuRI	GGCC	5 cut(s)	193, 578, 984, 1063, 1410
BtgI	CCRYGG	4 cut(s)	35, 150, 1411, 1490
BtsCI	GGATG	3 cut(s)	146, 256, 1384
BtsIMutI	CAGTG	2 cut(s)	663, 1467
BveI	ACCTGC	3 cut(s)	151, 267, 1667
Cac8I	GCNNGC	1 cut(s)	569
CciI	TCATGA	1 cut(s)	1986
CfoI	GCGC	2 cut(s)	1437, 1548
Cfr10I	RCCGGY	2 cut(s)	160, 1676
Cfr13I	GGNCC	9 cut(s)	154, 191, 440, 552, 968, 983, 1537, 1656, 1670
CpoI	CGGWCCG	1 cut(s)	440
Csp6I	GTAC	4 cut(s)	387, 591, 1478, 1486
CspAI	ACCGGT	1 cut(s)	160
CspCI	CAANNNNNGTGG	2 cut(s)	409, 444
CspI	CGGWCCG	1 cut(s)	440
CviQI	GTAC	4 cut(s)	387, 591, 1478, 1486
DdeI	CTNAG	6 cut(s)	548, 560, 1121, 1284, 1428, 1626
DrdI	GACNNNNNNGTC	1 cut(s)	122
DseDI	GACNNNNNNGTC	1 cut(s)	122
EaeI	YGGCCR	2 cut(s)	576, 1408
EagI	CGGCCG	1 cut(s)	1408
Eam1104I	CTCTTC	1 cut(s)	63
EarI	CTCTTC	1 cut(s)	63
Ecl136II	GAGCTC	1 cut(s)	86
EclXI	CGGCCG	1 cut(s)	1408
Eco130I	CCWWGG	2 cut(s)	35, 795
Eco147I	AGGCCT	1 cut(s)	1063
Eco24I	GRGCYC	1 cut(s)	88
Eco31I	GGTCTC	1 cut(s)	1604
Eco32I	GATATC	2 cut(s)	699, 1953
Eco47I	GGWCC	7 cut(s)	154, 440, 552, 968, 1537, 1656, 1670
Eco52I	CGGCCG	1 cut(s)	1408
Eco53kI	GAGCTC	1 cut(s)	86
Eco57I	CTGAAG	2 cut(s)	846, 1815
EcoICRI	GAGCTC	1 cut(s)	86
EcoRI	GAATTC	1 cut(s)	1253
EcoRII	CCWGG	4 cut(s)	187, 673, 1722, 1927
EcoRV	GATATC	2 cut(s)	699, 1953
EcoT14I	CCWWGG	2 cut(s)	35, 795
EcoT38I	GRGCYC	1 cut(s)	88
ErhI	CCWWGG	2 cut(s)	35, 795
Esp3I	CGTCTC	1 cut(s)	524
FaqI	GGGAC	3 cut(s)	128, 315, 447
FauI	CCCGC	1 cut(s)	1526
FauNDI	CATATG	1 cut(s)	246
FbaI	TGATCA	2 cut(s)	850, 1213
Fnu4HI	GCNGC	7 cut(s)	194, 565, 579, 935, 960, 1056, 1592
FokI	GGATG	3 cut(s)	133, 263, 1391
FriOI	GRGCYC	1 cut(s)	88
Fsp4HI	GCNGC	7 cut(s)	194, 565, 579, 935, 960, 1056, 1592
FspBI	CTAG	2 cut(s)	963, 1565
GlaI	GCGC	2 cut(s)	1436, 1547
GluI	GCNGC	7 cut(s)	194, 565, 579, 935, 960, 1056, 1592
GsaI	CCCAGC	1 cut(s)	1835
GsuI	CTGGAG	1 cut(s)	1254
HaeIII	GGCC	5 cut(s)	193, 578, 984, 1063, 1410
HapII	CCGG	5 cut(s)	161, 318, 491, 1677, 1881
HhaI	GCGC	2 cut(s)	1437, 1548
Hin1I	GRCGYC	1 cut(s)	117
Hin6I	GCGC	2 cut(s)	1435, 1546
HinP1I	GCGC	2 cut(s)	1435, 1546
HincII	GTYRAC	2 cut(s)	1168, 1225
HindII	GTYRAC	2 cut(s)	1168, 1225
HinfI	GANTC	8 cut(s)	43, 435, 445, 656, 736, 800, 1364, 1389
HpaII	CCGG	5 cut(s)	161, 318, 491, 1677, 1881
HphI	GGTGA	3 cut(s)	175, 530, 784
Hpy188I	TCNGA	8 cut(s)	140, 444, 450, 486, 865, 1388, 1656, 1762
Hpy188III	TCNNGA	9 cut(s)	15, 318, 607, 733, 806, 1233, 1535, 1646, 1987
Hpy99I	CGWCG	1 cut(s)	122
HpyAV	CCTTC	6 cut(s)	414, 670, 764, 1090, 1541, 1720
HpyCH4III	ACNGT	6 cut(s)	667, 825, 1165, 1229, 1477, 1541
HpyCH4IV	ACGT	3 cut(s)	117, 356, 1086
HpyF10VI	GCNNNNNNNGC	5 cut(s)	83, 854, 1133, 1858, 1867
HpyF3I	CTNAG	6 cut(s)	548, 560, 1121, 1284, 1428, 1626
HpySE526I	ACGT	3 cut(s)	117, 356, 1086
Hsp92I	GRCGYC	1 cut(s)	117
HspAI	GCGC	2 cut(s)	1435, 1546
Kpn2I	TCCGGA	1 cut(s)	317
Ksp22I	TGATCA	2 cut(s)	850, 1213
LmnI	GCTCC	2 cut(s)	83, 953
Lsp1109I	GCAGC	5 cut(s)	576, 921, 946, 1067, 1603
LweI	GCATC	5 cut(s)	14, 144, 155, 1136, 1671
MaeI	CTAG	2 cut(s)	963, 1565
MaeII	ACGT	3 cut(s)	117, 356, 1086
MaeIII	GTNAC	4 cut(s)	536, 667, 841, 1096
MboII	GAAGA	8 cut(s)	50, 98, 266, 500, 691, 1808, 1848, 1945
MfeI	CAATTG	1 cut(s)	978
MflI	RGATCY	5 cut(s)	450, 544, 634, 773, 1076
MhlI	GDGCHC	3 cut(s)	88, 1153, 1572
MlyI	GAGTC	2 cut(s)	665, 1358
MmeI	TCCRAC	3 cut(s)	391, 688, 799
MroI	TCCGGA	1 cut(s)	317
MseI	TTAA	6 cut(s)	231, 240, 897, 1184, 1278, 1992
MslI	CAYNNNNRTG	5 cut(s)	231, 249, 1377, 1495, 1565
MspA1I	CMGCKG	2 cut(s)	848, 959
MspI	CCGG	5 cut(s)	161, 318, 491, 1677, 1881
MspR9I	CCNGG	5 cut(s)	189, 675, 1724, 1882, 1929
MunI	CAATTG	1 cut(s)	978
Mva1269I	GAATGC	3 cut(s)	1560, 1630, 1813
MvaI	CCWGG	4 cut(s)	189, 675, 1724, 1929
MvnI	CGCG	1 cut(s)	1435
MwoI	GCNNNNNNNGC	5 cut(s)	83, 854, 1133, 1858, 1867
NciI	CCSGG	1 cut(s)	1882
NcoI	CCATGG	1 cut(s)	35
NdeI	CATATG	1 cut(s)	246
NlaIV	GGNNCC	4 cut(s)	636, 775, 1040, 1078
NmeAIII	GCCGAG	1 cut(s)	523
NmuCI	GTSAC	2 cut(s)	841, 1096
NspI	RCATGY	1 cut(s)	818
OliI	CACNNNNGTG	1 cut(s)	1495
PagI	TCATGA	1 cut(s)	1986
PceI	AGGCCT	1 cut(s)	1063
PciI	ACATGT	1 cut(s)	814
PctI	GAATGC	3 cut(s)	1560, 1630, 1813
PfeI	GAWTC	6 cut(s)	43, 435, 445, 736, 800, 1389
PflMI	CCANNNNNTGG	1 cut(s)	1035
PfoI	TCCNGGA	1 cut(s)	1722
PinAI	ACCGGT	1 cut(s)	160
PkrI	GCNGC	7 cut(s)	195, 566, 580, 936, 961, 1057, 1593
PleI	GAGTC	2 cut(s)	664, 1358
PpsI	GAGTC	2 cut(s)	664, 1358
PscI	ACATGT	1 cut(s)	814
Psp124BI	GAGCTC	1 cut(s)	88
Psp1406I	AACGTT	1 cut(s)	1086
Psp6I	CCWGG	4 cut(s)	187, 673, 1722, 1927
PspFI	CCCAGC	1 cut(s)	1831
PspGI	CCWGG	4 cut(s)	187, 673, 1722, 1927
PspN4I	GGNNCC	4 cut(s)	636, 775, 1040, 1078
PspPI	GGNCC	9 cut(s)	154, 191, 440, 552, 968, 983, 1537, 1656, 1670
PsuI	RGATCY	5 cut(s)	450, 544, 634, 773, 1076
PvuII	CAGCTG	2 cut(s)	848, 959
RsaI	GTAC	4 cut(s)	388, 592, 1479, 1487
RsaNI	GTAC	4 cut(s)	387, 591, 1478, 1486
RseI	CAYNNNNRTG	5 cut(s)	231, 249, 1377, 1495, 1565
Rsr2I	CGGWCCG	1 cut(s)	440
RsrII	CGGWCCG	1 cut(s)	440
SacI	GAGCTC	1 cut(s)	88
SaqAI	TTAA	6 cut(s)	231, 240, 897, 1184, 1278, 1992
SatI	GCNGC	7 cut(s)	194, 565, 579, 935, 960, 1056, 1592
Sau96I	GGNCC	9 cut(s)	154, 191, 440, 552, 968, 983, 1537, 1656, 1670
SchI	GAGTC	2 cut(s)	665, 1358
ScrFI	CCNGG	5 cut(s)	189, 675, 1724, 1882, 1929
SduI	GDGCHC	3 cut(s)	88, 1153, 1572
SfaNI	GCATC	5 cut(s)	14, 144, 155, 1136, 1671
SfcI	CTRYAG	1 cut(s)	1047
SinI	GGWCC	7 cut(s)	154, 440, 552, 968, 1537, 1656, 1670
SmiMI	CAYNNNNRTG	5 cut(s)	231, 249, 1377, 1495, 1565
SmlI	CTYRAG	1 cut(s)	371
SmoI	CTYRAG	1 cut(s)	371
SseBI	AGGCCT	1 cut(s)	1063
SsiI	CCGC	4 cut(s)	194, 579, 1505, 1519
SspMI	CTAG	2 cut(s)	963, 1565
SstI	GAGCTC	1 cut(s)	88
StuI	AGGCCT	1 cut(s)	1063
StyD4I	CCNGG	5 cut(s)	187, 673, 1722, 1880, 1927
StyI	CCWWGG	2 cut(s)	35, 795
TaaI	ACNGT	6 cut(s)	667, 825, 1165, 1229, 1477, 1541
TaiI	ACGT	3 cut(s)	120, 359, 1089
TaqI	TCGA	4 cut(s)	504, 748, 1713, 2003
TaqII	GACCGA	1 cut(s)	428
TatI	WGTACW	1 cut(s)	1477
TauI	GCSGC	2 cut(s)	196, 581
TfiI	GAWTC	6 cut(s)	43, 435, 445, 736, 800, 1389
Tru1I	TTAA	6 cut(s)	231, 240, 897, 1184, 1278, 1992
Tru9I	TTAA	6 cut(s)	231, 240, 897, 1184, 1278, 1992
TscAI	CASTG	2 cut(s)	670, 1467
TseFI	GTSAC	2 cut(s)	841, 1096
TseI	GCWGC	5 cut(s)	564, 934, 959, 1055, 1591
Tsp45I	GTSAC	2 cut(s)	841, 1096
TspGWI	ACGGA	2 cut(s)	139, 1507
TspRI	CASTG	2 cut(s)	670, 1467
Van91I	CCANNNNNTGG	1 cut(s)	1035
VneI	GTGCAC	2 cut(s)	1149, 1568
VpaK11BI	GGWCC	7 cut(s)	154, 440, 552, 968, 1537, 1656, 1670
XapI	RAATTY	4 cut(s)	727, 917, 1253, 1510
XceI	RCATGY	1 cut(s)	818
XspI	CTAG	2 cut(s)	963, 1565
ZraI	GACGTC	1 cut(s)	118

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.