Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0005544

Physical Location & Seq

Genomic Coordinates Forward (+)

55634220 .. 55640186

Gene Structure 5967 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG285100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGGCATTAAAGTCTGGAAGTGATCGCCGTTGTCCATGGCTGATTCTCCCTGCAACTCTTCTCATTGTCCTCCTTGCCTATGGAGCTCATGCTGAGGACATTTTTCTTCAATGGGACGTCGCCGTCGATACGAGTATCAGACCTGCATCCGTGGACCAACCGGTTATTACAATCAACGGGAAGTTTCCAGGGCCGCTTATCAATGCCACAACCAATGATATTGTTCATGTTAATGTGTTTAATAATATGGATGAAGAGCTGCTCATAACATGGAATGGGATACAACAAAGGCTAAACTCTTGGCAAGATGGAGTTTCCGGAACAAATTGTCCCATTCAGCCTTTTACAAACTGGACGTATGTGTTCCAACTCAAGGATCAAATTGGTACTTTTTCCTACTTTCCCTCCATCAACTTCCTCAAAGCTGGTGGGGGATTCGGTCCTATTCAGATCCATAATCGTCCCGTCATCCAAGTTCCATATCTGAAACCAGAAGCCGAGTTCAATCTTCTCATTGGTGATTGGTATGAGACGAGTTACAAGGATCTTAGATCCACACTCAGCAGCAAGCAAATGGCCGCCTTCAATAGTACCCCTGATAAAATCTTGATGAATGGAAAAGGATCATACGGGGATCCTCTAACAAAGGCGTATGAGTCCTTCACTGTTACATCAGGGAAGACATACCTAATTAGGATATCAAATGTTGGAAGTGCGTGGAGTTTGAATTTCTTGATTCAAAATCATCGAATGGTGCTGGTTGAAACAGAAGGATCCTATACTAATGAAATCACCTTGGATTCTCTTGATGTACATGTTGGACAGTCCTACTCTGTGCTTGTCACAGCTGATCAAGCCACTTCAGACTATTACATGGTAGCAACTCCTAAATTGCTTAAAATCACAGATATGACCAAATTTGGAATTGGTGTGCTGCACTATGATAGCTCCACCACAGCTGCTAGTGGACCTCTACCAATTGGCCCGGACCCTTTTGATATTGAACTATCCATCAATCAAGCCAACTCCATCAGATGGAACCTGACTACAGGGGCAGCAAGGCCTAATCCACAAGGATCCTTCAACGTTCATAATGTGACACTATCACAGACATTCATACTAAGTGCATCAACAGCAGAGATTGATGGTGCACCCAAGTTTACTGTCAACAATGTGTCTTACTTAACCCCAGATACACCATTGAAGTTGGCTGATCACTTGGTCAACGGTTCTGGAGTTTACGAGCTTGATGAATTCTCTACTAACTCTACAAATGGTAAACCTGAGCGTGGAGTTTTTGTTGCAAGTGGGATACACAAAGGGTGGATAGAACTTGTTTTCCACAATGATTTGGAGGTCATGGACTCTTGGCATTTGGATGGCTTCGGATTCTTTGTTGTTGGCTACGGCCGTGGAAAGTGGAGTGCTAAGTCGCGCTCAACCTACAACCTTTATGATCCAGTGGTGCGTTCTACTGTACAAGTGTACCCACGGAGGTGGAGTGCGGTTTATGCATACCTTGACAACACTGGAATGTGGAATTTGAGGTCACAGCACTTGAAAAATTGGTATTTGGGTGAAGAGCTATATGTGAGAGTCTATGATGCTGATCCCAACCCTGCAAAAGAGAGGCCTTCCCCTAATAACATTCTTCTTTGTGGAAAATTTGCCCCACCCACTCCTCCTTCTGGACCGTCTGCACCTCCTCCAAAGCCATCTAGTGCACCATCTTTGCAAATTACAGCAGCAGGGTACGTCTCATATTGTCATTATCTGCATTATTGCAACATTCATTCAAATATCCAGAGGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

604

Amino Acids

67.02

Weight (kDa)

6.05

Isoelectric Point (pI)

39.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	47 - 154	3.9e-36	Multicopper oxidase
Cu-oxidase	PF00394	168 - 316	5e-40	Multicopper oxidase
Cu-oxidase_2	PF07731	399 - 536	2e-27	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005544)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g18341 FvH4_7g18350
malus_domestica	MD01G1098800.v1.1 MD01G1099000.v1.1 MD07G1165500.v1.1 MD07G1165800.v1.1
prunus_persica	Prupe.2G205500_v2.0.a1 Prupe.2G205600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0362061 RchiOBHm_Chr1g0362091 RchiOBHm_Chr7g0206161
rosa_laevigata	RLG00000027672 RLG00000027676
rosa_multiflora	Rmu_co8403161.1_g000001 Rmu_sc0010614.1_g000004
rosa_roxburghii	Rroxscaffold_4G00294510 Rroxscaffold_4G00294540
rosa_rugosa	Rorug01G0293200 Rorug01G0293600
rosa_samantha	Rh1BG266700 Rh1BG267000 Rh1CG284800 Rh1CG285100 Rh1DG296700 Rh1DG297100 Rh7DG233000
rosa_wichuraiana	Rw1G027020 Rw1G027050 Rw7G019480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	122
AatII	GACGTC	1 cut(s)	120
Acc36I	ACCTGC	1 cut(s)	151
AccB7I	CCANNNNNTGG	1 cut(s)	1035
AccII	CGCG	1 cut(s)	1435
AccIII	TCCGGA	1 cut(s)	317
AciI	CCGC	3 cut(s)	194, 579, 1505
AclI	AACGTT	1 cut(s)	1086
AcoI	YGGCCR	2 cut(s)	576, 1408
AcsI	RAATTY	5 cut(s)	727, 917, 1253, 1540, 1664
AcuI	CTGAAG	1 cut(s)	846
AcyI	GRCGYC	1 cut(s)	117
AfaI	GTAC	6 cut(s)	388, 592, 813, 1479, 1487, 1754
AfiI	CCNNNNNNNGG	4 cut(s)	373, 1035, 1289, 1688
AflIII	ACRYGT	1 cut(s)	814
AgeI	ACCGGT	1 cut(s)	160
AjnI	CCWGG	1 cut(s)	187
AleI	CACNNNNGTG	1 cut(s)	1495
AloI	GAACNNNNNNTCC	4 cut(s)	313, 345, 1323, 1355
AluBI	AGCT	8 cut(s)	86, 259, 425, 848, 948, 959, 1246, 1585
AluI	AGCT	8 cut(s)	86, 259, 425, 848, 948, 959, 1246, 1585
Alw21I	GWGCWC	3 cut(s)	88, 1153, 1726
Alw26I	GTCTC	2 cut(s)	524, 1762
Alw44I	GTGCAC	2 cut(s)	1149, 1722
Aor13HI	TCCGGA	1 cut(s)	317
AoxI	GGCC	6 cut(s)	191, 576, 982, 1061, 1408, 1631
ApaLI	GTGCAC	2 cut(s)	1149, 1722
ApeKI	GCWGC	6 cut(s)	259, 564, 934, 959, 1055, 1745
ApoI	RAATTY	5 cut(s)	727, 917, 1253, 1540, 1664
AsiGI	ACCGGT	1 cut(s)	160
AspLEI	GCGC	1 cut(s)	1437
AspS9I	GGNCC	7 cut(s)	154, 191, 440, 968, 983, 988, 1691
AsuC2I	CCSGG	1 cut(s)	986
AsuHPI	GGTGA	3 cut(s)	530, 784, 1589
AvaII	GGWCC	5 cut(s)	154, 440, 968, 988, 1691
BaeGI	GKGCMC	2 cut(s)	1153, 1726
BaeI	ACNNNNGTAYC	2 cut(s)	1469, 1502
BamHI	GGATCC	3 cut(s)	634, 773, 1076
BanII	GRGCYC	1 cut(s)	88
BarI	GAAGNNNNNNTAC	2 cut(s)	644, 676
BbsI	GAAGAC	1 cut(s)	686
Bbv12I	GWGCWC	3 cut(s)	88, 1153, 1726
BbvCI	CCTCAGC	1 cut(s)	93
BbvI	GCAGC	6 cut(s)	246, 576, 921, 946, 1067, 1757
BccI	CCATC	9 cut(s)	302, 416, 1019, 1029, 1037, 1139, 1373, 1723, 1735
BceAI	ACGGC	4 cut(s)	12, 107, 1395, 1423
BciT130I	CCWGG	1 cut(s)	189
BciVI	GTATCC	2 cut(s)	273, 1305
BclI	TGATCA	2 cut(s)	850, 1213
BcnI	CCSGG	1 cut(s)	986
BcoDI	GTCTC	2 cut(s)	524, 1762
BfaI	CTAG	2 cut(s)	963, 1719
BfmI	CTRYAG	1 cut(s)	1047
BfuAI	ACCTGC	1 cut(s)	151
BfuI	GTATCC	2 cut(s)	273, 1305
BisI	GCNGC	8 cut(s)	194, 260, 565, 579, 935, 960, 1056, 1746
BlsI	GCNGC	8 cut(s)	195, 261, 566, 580, 936, 961, 1057, 1747
Bme1390I	CCNGG	2 cut(s)	189, 986
Bme18I	GGWCC	5 cut(s)	154, 440, 968, 988, 1691
BmgT120I	GGNCC	7 cut(s)	154, 191, 440, 968, 983, 988, 1691
BmiI	GGNNCC	5 cut(s)	636, 775, 990, 1040, 1078
BmrFI	CCNGG	2 cut(s)	189, 986
BmsI	GCATC	3 cut(s)	155, 1136, 1594
BpiI	GAAGAC	1 cut(s)	686
BpmI	CTGGAG	1 cut(s)	1254
Bpu10I	CCTNAGC	2 cut(s)	93, 1284
BpuEI	CTTGAG	1 cut(s)	356
BpuMI	CCSGG	1 cut(s)	986
BsaBI	GATNNNNATC	1 cut(s)	1608
BsaHI	GRCGYC	1 cut(s)	117
BsaJI	CCNNGG	6 cut(s)	35, 150, 188, 795, 1411, 1490
BsaWI	WCCGGW	2 cut(s)	160, 317
BsaXI	ACNNNNNCTCC	6 cut(s)	389, 419, 1284, 1314, 1486, 1516
Bsc4I	CCNNNNNNNGG	4 cut(s)	373, 1035, 1289, 1688
Bse118I	RCCGGY	1 cut(s)	160
Bse1I	ACTGG	3 cut(s)	356, 1460, 1534
Bse8I	GATNNNNATC	1 cut(s)	1608
BseAI	TCCGGA	1 cut(s)	317
BseBI	CCWGG	1 cut(s)	189
BseDI	CCNNGG	6 cut(s)	35, 150, 188, 795, 1411, 1490
BseGI	GGATG	4 cut(s)	146, 256, 468, 1384
BseJI	GATNNNNATC	1 cut(s)	1608
BseLI	CCNNNNNNNGG	4 cut(s)	373, 1035, 1289, 1688
BseMII	CTCAG	3 cut(s)	84, 574, 1275
BseNI	ACTGG	3 cut(s)	356, 1460, 1534
BseRI	GAGGAG	2 cut(s)	1671, 1695
BseSI	GKGCMC	2 cut(s)	1153, 1726
BseX3I	CGGCCG	1 cut(s)	1408
BseXI	GCAGC	6 cut(s)	246, 576, 921, 946, 1067, 1757
BsgI	GTGCAG	2 cut(s)	920, 1683
Bsh1236I	CGCG	1 cut(s)	1435
Bsh1285I	CGRYCG	1 cut(s)	1411
BshFI	GGCC	6 cut(s)	193, 578, 984, 1063, 1410, 1633
BshTI	ACCGGT	1 cut(s)	160
BsiEI	CGRYCG	1 cut(s)	1411
BsiHKAI	GWGCWC	3 cut(s)	88, 1153, 1726
BsiSI	CCGG	3 cut(s)	161, 318, 986
BslFI	GGGAC	3 cut(s)	128, 315, 447
BslI	CCNNNNNNNGG	4 cut(s)	373, 1035, 1289, 1688
BsmAI	GTCTC	2 cut(s)	524, 1762
BsmBI	CGTCTC	2 cut(s)	524, 1762
BsmFI	GGGAC	3 cut(s)	128, 315, 447
BsnI	GGCC	6 cut(s)	193, 578, 984, 1063, 1410, 1633
Bsp1286I	GDGCHC	3 cut(s)	88, 1153, 1726
Bsp13I	TCCGGA	1 cut(s)	317
Bsp1407I	TGTACA	2 cut(s)	811, 1477
Bsp19I	CCATGG	1 cut(s)	35
BspACI	CCGC	3 cut(s)	194, 579, 1505
BspANI	GGCC	6 cut(s)	193, 578, 984, 1063, 1410, 1633
BspCNI	CTCAG	3 cut(s)	85, 573, 1276
BspEI	TCCGGA	1 cut(s)	317
BspFNI	CGCG	1 cut(s)	1435
BspLI	GGNNCC	5 cut(s)	636, 775, 990, 1040, 1078
BspMI	ACCTGC	1 cut(s)	151
BspQI	GCTCTTC	2 cut(s)	249, 1575
BsrFI	RCCGGY	1 cut(s)	160
BsrGI	TGTACA	2 cut(s)	811, 1477
BsrI	ACTGG	3 cut(s)	356, 1460, 1534
BssAI	RCCGGY	1 cut(s)	160
BssECI	CCNNGG	6 cut(s)	35, 150, 188, 795, 1411, 1490
BssNI	GRCGYC	1 cut(s)	117
BssT1I	CCWWGG	2 cut(s)	35, 795
Bst2UI	CCWGG	1 cut(s)	189
Bst4CI	ACNGT	6 cut(s)	667, 825, 1165, 1229, 1477, 1695
Bst6I	CTCTTC	3 cut(s)	63, 249, 1575
BstACI	GRCGYC	1 cut(s)	117
BstAUI	TGTACA	2 cut(s)	811, 1477
BstC8I	GCNNGC	1 cut(s)	569
BstDEI	CTNAG	6 cut(s)	93, 548, 560, 1121, 1284, 1428
BstDSI	CCRYGG	4 cut(s)	35, 150, 1411, 1490
BstF5I	GGATG	4 cut(s)	146, 256, 468, 1384
BstFNI	CGCG	1 cut(s)	1435
BstHHI	GCGC	1 cut(s)	1437
BstMAI	GTCTC	2 cut(s)	524, 1762
BstMCI	CGRYCG	1 cut(s)	1411
BstMWI	GCNNNNNNNGC	4 cut(s)	83, 854, 1133, 1511
BstNI	CCWGG	1 cut(s)	189
BstNSI	RCATGY	1 cut(s)	818
BstSCI	CCNGG	2 cut(s)	187, 984
BstSFI	CTRYAG	1 cut(s)	1047
BstSLI	GKGCMC	2 cut(s)	1153, 1726
BstUI	CGCG	1 cut(s)	1435
BstV1I	GCAGC	6 cut(s)	246, 576, 921, 946, 1067, 1757
BstV2I	GAAGAC	1 cut(s)	686
BstX2I	RGATCY	6 cut(s)	450, 544, 551, 634, 773, 1076
BstXI	CCANNNNNNTGG	1 cut(s)	1497
BstYI	RGATCY	6 cut(s)	450, 544, 551, 634, 773, 1076
BstZI	CGGCCG	1 cut(s)	1408
BsuI	GTATCC	2 cut(s)	273, 1305
BsuRI	GGCC	6 cut(s)	193, 578, 984, 1063, 1410, 1633
BtgI	CCRYGG	4 cut(s)	35, 150, 1411, 1490
BtsCI	GGATG	4 cut(s)	146, 256, 468, 1384
BtsIMutI	CAGTG	3 cut(s)	663, 1467, 1527
BveI	ACCTGC	1 cut(s)	151
Cac8I	GCNNGC	1 cut(s)	569
CfoI	GCGC	1 cut(s)	1437
Cfr10I	RCCGGY	1 cut(s)	160
Cfr13I	GGNCC	7 cut(s)	154, 191, 440, 968, 983, 988, 1691
Csp6I	GTAC	6 cut(s)	387, 591, 812, 1478, 1486, 1753
CspAI	ACCGGT	1 cut(s)	160
CspCI	CAANNNNNGTGG	2 cut(s)	409, 444
CviAII	CATG	7 cut(s)	36, 89, 227, 270, 815, 874, 1360
CviQI	GTAC	6 cut(s)	387, 591, 812, 1478, 1486, 1753
DdeI	CTNAG	6 cut(s)	93, 548, 560, 1121, 1284, 1428
DrdI	GACNNNNNNGTC	1 cut(s)	122
DseDI	GACNNNNNNGTC	1 cut(s)	122
EaeI	YGGCCR	2 cut(s)	576, 1408
EagI	CGGCCG	1 cut(s)	1408
Eam1104I	CTCTTC	3 cut(s)	63, 249, 1575
EarI	CTCTTC	3 cut(s)	63, 249, 1575
Ecl136II	GAGCTC	1 cut(s)	86
EclXI	CGGCCG	1 cut(s)	1408
Eco130I	CCWWGG	2 cut(s)	35, 795
Eco147I	AGGCCT	2 cut(s)	1063, 1633
Eco24I	GRGCYC	1 cut(s)	88
Eco32I	GATATC	1 cut(s)	699
Eco47I	GGWCC	5 cut(s)	154, 440, 968, 988, 1691
Eco52I	CGGCCG	1 cut(s)	1408
Eco53kI	GAGCTC	1 cut(s)	86
Eco57I	CTGAAG	1 cut(s)	846
EcoICRI	GAGCTC	1 cut(s)	86
EcoRI	GAATTC	1 cut(s)	1253
EcoRII	CCWGG	1 cut(s)	187
EcoRV	GATATC	1 cut(s)	699
EcoT14I	CCWWGG	2 cut(s)	35, 795
EcoT22I	ATGCAT	1 cut(s)	1516
EcoT38I	GRGCYC	1 cut(s)	88
ErhI	CCWWGG	2 cut(s)	35, 795
Esp3I	CGTCTC	2 cut(s)	524, 1762
FaeI	CATG	7 cut(s)	39, 92, 230, 273, 818, 877, 1363
FaqI	GGGAC	3 cut(s)	128, 315, 447
FatI	CATG	7 cut(s)	35, 88, 226, 269, 814, 873, 1359
FbaI	TGATCA	2 cut(s)	850, 1213
Fnu4HI	GCNGC	8 cut(s)	194, 260, 565, 579, 935, 960, 1056, 1746
FokI	GGATG	4 cut(s)	133, 263, 455, 1391
FriOI	GRGCYC	1 cut(s)	88
Fsp4HI	GCNGC	8 cut(s)	194, 260, 565, 579, 935, 960, 1056, 1746
FspBI	CTAG	2 cut(s)	963, 1719
GlaI	GCGC	1 cut(s)	1436
GluI	GCNGC	8 cut(s)	194, 260, 565, 579, 935, 960, 1056, 1746
GsuI	CTGGAG	1 cut(s)	1254
HaeIII	GGCC	6 cut(s)	193, 578, 984, 1063, 1410, 1633
HapII	CCGG	3 cut(s)	161, 318, 986
HhaI	GCGC	1 cut(s)	1437
Hin1I	GRCGYC	1 cut(s)	117
Hin1II	CATG	7 cut(s)	39, 92, 230, 273, 818, 877, 1363
Hin6I	GCGC	1 cut(s)	1435
HinP1I	GCGC	1 cut(s)	1435
HincII	GTYRAC	2 cut(s)	1168, 1225
HindII	GTYRAC	2 cut(s)	1168, 1225
HinfI	GANTC	8 cut(s)	43, 435, 656, 736, 800, 1364, 1389, 1596
HpaII	CCGG	3 cut(s)	161, 318, 986
HphI	GGTGA	3 cut(s)	530, 784, 1589
Hpy188I	TCNGA	6 cut(s)	140, 450, 486, 865, 1034, 1388
Hpy188III	TCNNGA	8 cut(s)	15, 318, 607, 733, 806, 1233, 1689, 1804
Hpy99I	CGWCG	2 cut(s)	122, 128
HpyAV	CCTTC	6 cut(s)	592, 670, 764, 1090, 1644, 1695
HpyCH4III	ACNGT	6 cut(s)	667, 825, 1165, 1229, 1477, 1695
HpyCH4IV	ACGT	4 cut(s)	117, 356, 1086, 1755
HpyF10VI	GCNNNNNNNGC	4 cut(s)	83, 854, 1133, 1511
HpyF3I	CTNAG	6 cut(s)	93, 548, 560, 1121, 1284, 1428
HpySE526I	ACGT	4 cut(s)	117, 356, 1086, 1755
Hsp92I	GRCGYC	1 cut(s)	117
Hsp92II	CATG	7 cut(s)	39, 92, 230, 273, 818, 877, 1363
HspAI	GCGC	1 cut(s)	1435
Kpn2I	TCCGGA	1 cut(s)	317
Ksp22I	TGATCA	2 cut(s)	850, 1213
LguI	GCTCTTC	2 cut(s)	249, 1575
LmnI	GCTCC	2 cut(s)	83, 953
Lsp1109I	GCAGC	6 cut(s)	246, 576, 921, 946, 1067, 1757
LweI	GCATC	3 cut(s)	155, 1136, 1594
MaeI	CTAG	2 cut(s)	963, 1719
MaeII	ACGT	4 cut(s)	117, 356, 1086, 1755
MaeIII	GTNAC	5 cut(s)	536, 667, 841, 1096, 1548
MboII	GAAGA	7 cut(s)	50, 98, 266, 500, 691, 1592, 1643
MfeI	CAATTG	1 cut(s)	978
MflI	RGATCY	6 cut(s)	450, 544, 551, 634, 773, 1076
MhlI	GDGCHC	3 cut(s)	88, 1153, 1726
MlyI	GAGTC	3 cut(s)	665, 1358, 1605
MmeI	TCCRAC	3 cut(s)	391, 688, 799
Mph1103I	ATGCAT	1 cut(s)	1516
MroI	TCCGGA	1 cut(s)	317
MseI	TTAA	5 cut(s)	8, 231, 240, 897, 1184
MslI	CAYNNNNRTG	5 cut(s)	231, 908, 1377, 1495, 1532
MspA1I	CMGCKG	2 cut(s)	848, 959
MspI	CCGG	3 cut(s)	161, 318, 986
MspR9I	CCNGG	2 cut(s)	189, 986
MunI	CAATTG	1 cut(s)	978
MvaI	CCWGG	1 cut(s)	189
MvnI	CGCG	1 cut(s)	1435
MwoI	GCNNNNNNNGC	4 cut(s)	83, 854, 1133, 1511
NciI	CCSGG	1 cut(s)	986
NcoI	CCATGG	1 cut(s)	35
NlaIII	CATG	7 cut(s)	39, 92, 230, 273, 818, 877, 1363
NlaIV	GGNNCC	5 cut(s)	636, 775, 990, 1040, 1078
NmeAIII	GCCGAG	1 cut(s)	523
NmuCI	GTSAC	3 cut(s)	841, 1096, 1548
NsiI	ATGCAT	1 cut(s)	1516
NspI	RCATGY	1 cut(s)	818
OliI	CACNNNNGTG	1 cut(s)	1495
PceI	AGGCCT	2 cut(s)	1063, 1633
PciI	ACATGT	1 cut(s)	814
PciSI	GCTCTTC	2 cut(s)	249, 1575
PcsI	WCGNNNNNNNCGW	1 cut(s)	123
PfeI	GAWTC	5 cut(s)	43, 435, 736, 800, 1389
PflMI	CCANNNNNTGG	1 cut(s)	1035
PinAI	ACCGGT	1 cut(s)	160
PkrI	GCNGC	8 cut(s)	195, 261, 566, 580, 936, 961, 1057, 1747
PleI	GAGTC	3 cut(s)	664, 1358, 1604
PpsI	GAGTC	3 cut(s)	664, 1358, 1604
PscI	ACATGT	1 cut(s)	814
Psp124BI	GAGCTC	1 cut(s)	88
Psp1406I	AACGTT	1 cut(s)	1086
Psp6I	CCWGG	1 cut(s)	187
PspGI	CCWGG	1 cut(s)	187
PspN4I	GGNNCC	5 cut(s)	636, 775, 990, 1040, 1078
PspPI	GGNCC	7 cut(s)	154, 191, 440, 968, 983, 988, 1691
PsuI	RGATCY	6 cut(s)	450, 544, 551, 634, 773, 1076
PvuII	CAGCTG	2 cut(s)	848, 959
RsaI	GTAC	6 cut(s)	388, 592, 813, 1479, 1487, 1754
RsaNI	GTAC	6 cut(s)	387, 591, 812, 1478, 1486, 1753
RseI	CAYNNNNRTG	5 cut(s)	231, 908, 1377, 1495, 1532
SacI	GAGCTC	1 cut(s)	88
SapI	GCTCTTC	2 cut(s)	249, 1575
SaqAI	TTAA	5 cut(s)	8, 231, 240, 897, 1184
SatI	GCNGC	8 cut(s)	194, 260, 565, 579, 935, 960, 1056, 1746
Sau96I	GGNCC	7 cut(s)	154, 191, 440, 968, 983, 988, 1691
SchI	GAGTC	3 cut(s)	665, 1358, 1605
ScrFI	CCNGG	2 cut(s)	189, 986
SduI	GDGCHC	3 cut(s)	88, 1153, 1726
SfaNI	GCATC	3 cut(s)	155, 1136, 1594
SfcI	CTRYAG	1 cut(s)	1047
SinI	GGWCC	5 cut(s)	154, 440, 968, 988, 1691
SmiMI	CAYNNNNRTG	5 cut(s)	231, 908, 1377, 1495, 1532
SmlI	CTYRAG	1 cut(s)	371
SmoI	CTYRAG	1 cut(s)	371
SseBI	AGGCCT	2 cut(s)	1063, 1633
SsiI	CCGC	3 cut(s)	194, 579, 1505
SspMI	CTAG	2 cut(s)	963, 1719
SstI	GAGCTC	1 cut(s)	88
StuI	AGGCCT	2 cut(s)	1063, 1633
StyD4I	CCNGG	2 cut(s)	187, 984
StyI	CCWWGG	2 cut(s)	35, 795
TaaI	ACNGT	6 cut(s)	667, 825, 1165, 1229, 1477, 1695
TaiI	ACGT	4 cut(s)	120, 359, 1089, 1758
TaqI	TCGA	2 cut(s)	126, 748
TaqII	GACCGA	1 cut(s)	428
TatI	WGTACW	2 cut(s)	811, 1477
TauI	GCSGC	2 cut(s)	196, 581
TfiI	GAWTC	5 cut(s)	43, 435, 736, 800, 1389
Tru1I	TTAA	5 cut(s)	8, 231, 240, 897, 1184
Tru9I	TTAA	5 cut(s)	8, 231, 240, 897, 1184
TscAI	CASTG	3 cut(s)	670, 1467, 1534
TseFI	GTSAC	3 cut(s)	841, 1096, 1548
TseI	GCWGC	6 cut(s)	259, 564, 934, 959, 1055, 1745
Tsp45I	GTSAC	3 cut(s)	841, 1096, 1548
TspDTI	ATGAA	8 cut(s)	215, 267, 626, 801, 1079, 1105, 1266, 1781
TspGWI	ACGGA	2 cut(s)	139, 1507
TspRI	CASTG	3 cut(s)	670, 1467, 1534
Van91I	CCANNNNNTGG	1 cut(s)	1035
VneI	GTGCAC	2 cut(s)	1149, 1722
VpaK11BI	GGWCC	5 cut(s)	154, 440, 968, 988, 1691
XapI	RAATTY	5 cut(s)	727, 917, 1253, 1540, 1664
XceI	RCATGY	1 cut(s)	818
XspI	CTAG	2 cut(s)	963, 1719
ZraI	GACGTC	1 cut(s)	118
Zsp2I	ATGCAT	1 cut(s)	1516

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.