No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G12590 AT3G12590 |
| fragaria_vesca | FvH4_7g21970 FvH4_7g21970 FvH4_7g21970 FvH4_7g21970 FvH4_7g21970 FvH4_7g21970 FvH4_7g21970 FvH4_7g21970 FvH4_7g22001 FvH4_7g22001 |
| malus_domestica | MD01G1124000.v1.1 MD07G1194200.v1.1 |
| prunus_persica | Prupe.2G231600_v2.0.a1 Prupe.2G231600_v2.0.a1 Prupe.2G231600_v2.0.a1 Prupe.2G231600_v2.0.a1 Prupe.2G231600_v2.0.a1 Prupe.2G231600_v2.0.a1 Prupe.2G231600_v2.0.a1 Prupe.2G231600_v2.0.a1 Prupe.2G231600_v2.0.a1 Prupe.2G231600_v2.0.a1 |
| pyrus_communis | pycom01g15050 pycom07g18300 |
| rosa_chinensis | RchiOBHm_Chr1g0366301 |
| rosa_laevigata | RLG00000027354 |
| rosa_multiflora | Rmu_co8229963.1_g000001 Rmu_co8389475.1_g000001 Rmu_ssc0000250.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00290010 Rroxscaffold_4G00290260 |
| rosa_rugosa | Rorug01G0328600 Rorug01G0328600 Rorug01G0328700.1 |
| rosa_samantha | Rh1AG336900 Rh1BG298500 Rh1CG313800 Rh1DG329900 |
| rosa_wichuraiana | Rw1G029870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 282, 1850 |
| AarI | CACCTGC | 1 cut(s) | 59 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1403 |
| Acc36I | ACCTGC | 2 cut(s) | 59, 2562 |
| AccB1I | GGYRCC | 1 cut(s) | 2435 |
| AccBSI | CCGCTC | 1 cut(s) | 146 |
| AccII | CGCG | 1 cut(s) | 173 |
| AclWI | GGATC | 2 cut(s) | 496, 3374 |
| AcoI | YGGCCR | 2 cut(s) | 150, 3233 |
| AcsI | RAATTY | 4 cut(s) | 234, 1879, 2584, 3413 |
| AcuI | CTGAAG | 8 cut(s) | 35, 1968, 2223, 2637, 2646, 3509, 3572, 3590 |
| AdeI | CACNNNGTG | 1 cut(s) | 734 |
| AfaI | GTAC | 7 cut(s) | 543, 1129, 1944, 1975, 2826, 3373, 3512 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 148, 1066, 3178 |
| AflII | CTTAAG | 1 cut(s) | 1448 |
| AflIII | ACRYGT | 3 cut(s) | 1398, 1478, 1929 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 160 |
| AjnI | CCWGG | 4 cut(s) | 95, 3075, 3316, 3393 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 429, 461 |
| AleI | CACNNNNGTG | 1 cut(s) | 1218 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2363, 2395 |
| Alw21I | GWGCWC | 4 cut(s) | 216, 1175, 2974, 3547 |
| AlwI | GGATC | 2 cut(s) | 496, 3374 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1646, 3383 |
| Ama87I | CYCGRG | 4 cut(s) | 35, 1185, 2843, 3445 |
| AoxI | GGCC | 5 cut(s) | 150, 1138, 3112, 3180, 3233 |
| ApoI | RAATTY | 4 cut(s) | 234, 1879, 2584, 3413 |
| AseI | ATTAAT | 1 cut(s) | 2922 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 199, 1896, 2754 |
| AspLEI | GCGC | 5 cut(s) | 141, 835, 855, 2200, 2882 |
| AspS9I | GGNCC | 3 cut(s) | 449, 702, 1139 |
| AsuC2I | CCSGG | 3 cut(s) | 36, 37, 1417 |
| AsuHPI | GGTGA | 2 cut(s) | 1180, 3065 |
| AvaI | CYCGRG | 4 cut(s) | 35, 1185, 2843, 3445 |
| AvaII | GGWCC | 2 cut(s) | 449, 702 |
| AxyI | CCTNAGG | 1 cut(s) | 883 |
| BaeGI | GKGCMC | 2 cut(s) | 565, 1661 |
| BalI | TGGCCA | 1 cut(s) | 3235 |
| BanI | GGYRCC | 1 cut(s) | 2435 |
| BanII | GRGCYC | 5 cut(s) | 35, 652, 2485, 2974, 3547 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 381, 413 |
| BauI | CACGAG | 1 cut(s) | 3207 |
| BbsI | GAAGAC | 2 cut(s) | 678, 929 |
| Bbv12I | GWGCWC | 4 cut(s) | 216, 1175, 2974, 3547 |
| BbvCI | CCTCAGC | 2 cut(s) | 1251, 1666 |
| BccI | CCATC | 8 cut(s) | 262, 636, 800, 1360, 2532, 2721, 2983, 3028 |
| BceAI | ACGGC | 4 cut(s) | 528, 1083, 2318, 2423 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 243, 277, 392, 426, 3444, 3478 |
| BciT130I | CCWGG | 4 cut(s) | 97, 3077, 3318, 3395 |
| BclI | TGATCA | 1 cut(s) | 1039 |
| BcnI | CCSGG | 3 cut(s) | 36, 37, 1417 |
| BfaI | CTAG | 8 cut(s) | 251, 384, 546, 941, 1326, 1862, 2283, 3134 |
| BfmI | CTRYAG | 4 cut(s) | 401, 1216, 1272, 3375 |
| BfoI | RGCGCY | 2 cut(s) | 856, 2883 |
| BfrI | CTTAAG | 1 cut(s) | 1448 |
| BfuAI | ACCTGC | 2 cut(s) | 59, 2562 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2683 |
| BglII | AGATCT | 3 cut(s) | 104, 817, 3107 |
| BlpI | GCTNAGC | 1 cut(s) | 3546 |
| Bme1390I | CCNGG | 7 cut(s) | 36, 37, 97, 1417, 3077, 3318, 3395 |
| Bme18I | GGWCC | 2 cut(s) | 449, 702 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 160 |
| BmeT110I | CYCGRG | 4 cut(s) | 35, 1185, 2843, 3445 |
| BmgT120I | GGNCC | 3 cut(s) | 449, 702, 1139 |
| BmiI | GGNNCC | 7 cut(s) | 32, 132, 196, 649, 1954, 2437, 3311 |
| BmrFI | CCNGG | 7 cut(s) | 36, 37, 97, 1417, 3077, 3318, 3395 |
| BmrI | ACTGGG | 2 cut(s) | 1055, 3639 |
| BmuI | ACTGGG | 2 cut(s) | 1055, 3639 |
| BoxI | GACNNNNGTC | 1 cut(s) | 447 |
| BpiI | GAAGAC | 2 cut(s) | 678, 929 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 451, 483 |
| BpmI | CTGGAG | 3 cut(s) | 79, 666, 2154 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1251, 1666 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3546 |
| BpuEI | CTTGAG | 4 cut(s) | 1569, 1834, 2275, 2986 |
| BpuMI | CCSGG | 3 cut(s) | 36, 37, 1417 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2867 |
| BsaI | GGTCTC | 1 cut(s) | 597 |
| BsaWI | WCCGGW | 4 cut(s) | 22, 456, 1165, 1821 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 75, 105, 3153, 3183 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 148, 1066, 3178 |
| Bse118I | RCCGGY | 1 cut(s) | 2636 |
| Bse1I | ACTGG | 5 cut(s) | 1061, 1204, 2137, 3099, 3634 |
| Bse21I | CCTNAGG | 1 cut(s) | 883 |
| Bse3DI | GCAATG | 5 cut(s) | 303, 1266, 1900, 2827, 3270 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2867 |
| BseBI | CCWGG | 4 cut(s) | 97, 3077, 3318, 3395 |
| BseGI | GGATG | 7 cut(s) | 628, 878, 1162, 1366, 3039, 3085, 3439 |
| BseJI | GATNNNNATC | 1 cut(s) | 2867 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 148, 1066, 3178 |
| BseMI | GCAATG | 5 cut(s) | 303, 1266, 1900, 2827, 3270 |
| BseMII | CTCAG | 7 cut(s) | 1242, 1275, 1680, 2133, 2435, 3130, 3560 |
| BseNI | ACTGG | 5 cut(s) | 1061, 1204, 2137, 3099, 3634 |
| BseRI | GAGGAG | 9 cut(s) | 90, 93, 96, 99, 102, 157, 206, 1757, 2272 |
| BseSI | GKGCMC | 2 cut(s) | 565, 1661 |
| BseYI | CCCAGC | 1 cut(s) | 325 |
| BsgI | GTGCAG | 4 cut(s) | 87, 711, 972, 3276 |
| Bsh1236I | CGCG | 1 cut(s) | 173 |
| Bsh1285I | CGRYCG | 1 cut(s) | 476 |
| BshFI | GGCC | 5 cut(s) | 152, 1140, 3114, 3182, 3235 |
| BshNI | GGYRCC | 1 cut(s) | 2435 |
| BsiEI | CGRYCG | 1 cut(s) | 476 |
| BsiHKAI | GWGCWC | 4 cut(s) | 216, 1175, 2974, 3547 |
| BsiHKCI | CYCGRG | 4 cut(s) | 35, 1185, 2843, 3445 |
| BslFI | GGGAC | 4 cut(s) | 52, 257, 901, 1432 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 148, 1066, 3178 |
| BsmBI | CGTCTC | 1 cut(s) | 2846 |
| BsmFI | GGGAC | 4 cut(s) | 52, 257, 901, 1432 |
| BsmI | GAATGC | 4 cut(s) | 443, 933, 1306, 2536 |
| BsnI | GGCC | 5 cut(s) | 152, 1140, 3114, 3182, 3235 |
| Bso31I | GGTCTC | 1 cut(s) | 597 |
| BsoBI | CYCGRG | 4 cut(s) | 35, 1185, 2843, 3445 |
| Bsp1286I | GDGCHC | 9 cut(s) | 35, 216, 565, 652, 1175, 1661, 2485, 2974, 3547 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3546 |
| Bsp19I | CCATGG | 1 cut(s) | 190 |
| BspANI | GGCC | 5 cut(s) | 152, 1140, 3114, 3182, 3235 |
| BspCNI | CTCAG | 7 cut(s) | 1243, 1276, 1679, 2134, 2436, 3129, 3559 |
| BspFNI | CGCG | 1 cut(s) | 173 |
| BspHI | TCATGA | 4 cut(s) | 2644, 2760, 2871, 3139 |
| BspLI | GGNNCC | 7 cut(s) | 32, 132, 196, 649, 1954, 2437, 3311 |
| BspMAI | CTGCAG | 3 cut(s) | 405, 1276, 3379 |
| BspMI | ACCTGC | 2 cut(s) | 59, 2562 |
| BspPI | GGATC | 2 cut(s) | 496, 3374 |
| BspT107I | GGYRCC | 1 cut(s) | 2435 |
| BspTI | CTTAAG | 1 cut(s) | 1448 |
| BspTNI | GGTCTC | 1 cut(s) | 597 |
| BsrBI | CCGCTC | 1 cut(s) | 146 |
| BsrDI | GCAATG | 5 cut(s) | 303, 1266, 1900, 2827, 3270 |
| BsrFI | RCCGGY | 1 cut(s) | 2636 |
| BsrI | ACTGG | 5 cut(s) | 1061, 1204, 2137, 3099, 3634 |
| BssAI | RCCGGY | 1 cut(s) | 2636 |
| BssSI | CACGAG | 1 cut(s) | 3207 |
| BssT1I | CCWWGG | 4 cut(s) | 190, 1001, 1513, 2889 |
| Bst2BI | CACGAG | 1 cut(s) | 3207 |
| Bst2UI | CCWGG | 4 cut(s) | 97, 3077, 3318, 3395 |
| Bst6I | CTCTTC | 5 cut(s) | 384, 678, 1569, 1734, 3298 |
| BstAFI | CTTAAG | 1 cut(s) | 1448 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 335, 3383 |
| BstC8I | GCNNGC | 4 cut(s) | 857, 1617, 1907, 3612 |
| BstDSI | CCRYGG | 3 cut(s) | 171, 190, 470 |
| BstEII | GGTNACC | 1 cut(s) | 1546 |
| BstF5I | GGATG | 7 cut(s) | 628, 878, 1162, 1366, 3039, 3085, 3439 |
| BstFNI | CGCG | 1 cut(s) | 173 |
| BstH2I | RGCGCY | 2 cut(s) | 856, 2883 |
| BstHHI | GCGC | 5 cut(s) | 141, 835, 855, 2200, 2882 |
| BstMCI | CGRYCG | 1 cut(s) | 476 |
| BstNI | CCWGG | 4 cut(s) | 97, 3077, 3318, 3395 |
| BstNSI | RCATGY | 6 cut(s) | 1402, 1482, 1921, 1933, 2617, 3523 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 447 |
| BstPI | GGTNACC | 1 cut(s) | 1546 |
| BstSCI | CCNGG | 7 cut(s) | 34, 35, 95, 1415, 3075, 3316, 3393 |
| BstSFI | CTRYAG | 4 cut(s) | 401, 1216, 1272, 3375 |
| BstSLI | GKGCMC | 2 cut(s) | 565, 1661 |
| BstUI | CGCG | 1 cut(s) | 173 |
| BstV2I | GAAGAC | 2 cut(s) | 678, 929 |
| BstX2I | RGATCY | 4 cut(s) | 104, 817, 3107, 3379 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 2804, 3199, 3401 |
| BstYI | RGATCY | 4 cut(s) | 104, 817, 3107, 3379 |
| Bsu36I | CCTNAGG | 1 cut(s) | 883 |
| BsuRI | GGCC | 5 cut(s) | 152, 1140, 3114, 3182, 3235 |
| BtgI | CCRYGG | 3 cut(s) | 171, 190, 470 |
| BtgZI | GCGATG | 1 cut(s) | 2166 |
| BtsCI | GGATG | 7 cut(s) | 628, 878, 1162, 1366, 3039, 3085, 3439 |
| BtsI | GCAGTG | 3 cut(s) | 1374, 2815, 2865 |
| BveI | ACCTGC | 2 cut(s) | 59, 2562 |
| Cac8I | GCNNGC | 4 cut(s) | 857, 1617, 1907, 3612 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1646, 3383 |
| CciI | TCATGA | 4 cut(s) | 2644, 2760, 2871, 3139 |
| CfoI | GCGC | 5 cut(s) | 141, 835, 855, 2200, 2882 |
| Cfr10I | RCCGGY | 1 cut(s) | 2636 |
| Cfr13I | GGNCC | 3 cut(s) | 449, 702, 1139 |
| Cfr42I | CCGCGG | 1 cut(s) | 174 |
| Cfr9I | CCCGGG | 1 cut(s) | 35 |
| CseI | GACGC | 2 cut(s) | 543, 1363 |
| Csp6I | GTAC | 7 cut(s) | 542, 1128, 1943, 1974, 2825, 3372, 3511 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 327, 362 |
| CviQI | GTAC | 7 cut(s) | 542, 1128, 1943, 1974, 2825, 3372, 3511 |
| DraIII | CACNNNGTG | 1 cut(s) | 734 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1403 |
| DriI | GACNNNNNGTC | 1 cut(s) | 160 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1403 |
| EaeI | YGGCCR | 2 cut(s) | 150, 3233 |
| Eam1104I | CTCTTC | 5 cut(s) | 384, 678, 1569, 1734, 3298 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 160 |
| EarI | CTCTTC | 5 cut(s) | 384, 678, 1569, 1734, 3298 |
| EciI | GGCGGA | 1 cut(s) | 75 |
| Ecl136II | GAGCTC | 2 cut(s) | 2972, 3545 |
| Eco130I | CCWWGG | 4 cut(s) | 190, 1001, 1513, 2889 |
| Eco24I | GRGCYC | 5 cut(s) | 35, 652, 2485, 2974, 3547 |
| Eco31I | GGTCTC | 1 cut(s) | 597 |
| Eco32I | GATATC | 1 cut(s) | 2288 |
| Eco47I | GGWCC | 2 cut(s) | 449, 702 |
| Eco53kI | GAGCTC | 2 cut(s) | 2972, 3545 |
| Eco57I | CTGAAG | 8 cut(s) | 35, 1968, 2223, 2637, 2646, 3509, 3572, 3590 |
| Eco81I | CCTNAGG | 1 cut(s) | 883 |
| Eco88I | CYCGRG | 4 cut(s) | 35, 1185, 2843, 3445 |
| Eco91I | GGTNACC | 1 cut(s) | 1546 |
| EcoICRI | GAGCTC | 2 cut(s) | 2972, 3545 |
| EcoO109I | RGGNCCY | 1 cut(s) | 702 |
| EcoO65I | GGTNACC | 1 cut(s) | 1546 |
| EcoRI | GAATTC | 2 cut(s) | 234, 2584 |
| EcoRII | CCWGG | 4 cut(s) | 95, 3075, 3316, 3393 |
| EcoRV | GATATC | 1 cut(s) | 2288 |
| EcoT14I | CCWWGG | 4 cut(s) | 190, 1001, 1513, 2889 |
| EcoT22I | ATGCAT | 2 cut(s) | 933, 2278 |
| EcoT38I | GRGCYC | 5 cut(s) | 35, 652, 2485, 2974, 3547 |
| ErhI | CCWWGG | 4 cut(s) | 190, 1001, 1513, 2889 |
| Esp3I | CGTCTC | 1 cut(s) | 2846 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2503, 2535 |
| FaqI | GGGAC | 4 cut(s) | 52, 257, 901, 1432 |
| FauI | CCCGC | 1 cut(s) | 3398 |
| FbaI | TGATCA | 1 cut(s) | 1039 |
| FokI | GGATG | 7 cut(s) | 615, 865, 1169, 1373, 3046, 3092, 3446 |
| FriOI | GRGCYC | 5 cut(s) | 35, 652, 2485, 2974, 3547 |
| FspBI | CTAG | 8 cut(s) | 251, 384, 546, 941, 1326, 1862, 2283, 3134 |
| GlaI | GCGC | 5 cut(s) | 140, 834, 854, 2199, 2881 |
| GsaI | CCCAGC | 1 cut(s) | 329 |
| GsuI | CTGGAG | 3 cut(s) | 79, 666, 2154 |
| HaeII | RGCGCY | 2 cut(s) | 856, 2883 |
| HaeIII | GGCC | 5 cut(s) | 152, 1140, 3114, 3182, 3235 |
| HgaI | GACGC | 2 cut(s) | 543, 1363 |
| HhaI | GCGC | 5 cut(s) | 141, 835, 855, 2200, 2882 |
| Hin6I | GCGC | 5 cut(s) | 139, 833, 853, 2198, 2880 |
| HinP1I | GCGC | 5 cut(s) | 139, 833, 853, 2198, 2880 |
| HincII | GTYRAC | 2 cut(s) | 998, 3055 |
| HindII | GTYRAC | 2 cut(s) | 998, 3055 |
| HindIII | AAGCTT | 4 cut(s) | 225, 1907, 2205, 2225 |
| HphI | GGTGA | 2 cut(s) | 1180, 3065 |
| Hpy166II | GTNNAC | 5 cut(s) | 424, 998, 1223, 2300, 3055 |
| Hpy8I | GTNNAC | 5 cut(s) | 424, 998, 1223, 2300, 3055 |
| Hpy99I | CGWCG | 1 cut(s) | 268 |
| HpyAV | CCTTC | 9 cut(s) | 270, 377, 1065, 1943, 2189, 2426, 2507, 2573, 3323 |
| HpyCH4IV | ACGT | 1 cut(s) | 840 |
| HpySE526I | ACGT | 1 cut(s) | 840 |
| HspAI | GCGC | 5 cut(s) | 139, 833, 853, 2198, 2880 |
| Ksp22I | TGATCA | 1 cut(s) | 1039 |
| KspI | CCGCGG | 1 cut(s) | 174 |
| LmnI | GCTCC | 7 cut(s) | 30, 130, 219, 316, 647, 1993, 2977 |
| MaeI | CTAG | 8 cut(s) | 251, 384, 546, 941, 1326, 1862, 2283, 3134 |
| MaeII | ACGT | 1 cut(s) | 840 |
| MaeIII | GTNAC | 8 cut(s) | 1063, 1211, 1546, 2137, 2549, 2939, 3202, 3351 |
| MbiI | CCGCTC | 1 cut(s) | 146 |
| MfeI | CAATTG | 2 cut(s) | 1671, 1979 |
| MflI | RGATCY | 4 cut(s) | 104, 817, 3107, 3379 |
| MhlI | GDGCHC | 9 cut(s) | 35, 216, 565, 652, 1175, 1661, 2485, 2974, 3547 |
| MlsI | TGGCCA | 1 cut(s) | 3235 |
| MluNI | TGGCCA | 1 cut(s) | 3235 |
| MlyI | GAGTC | 3 cut(s) | 99, 2145, 3437 |
| MmeI | TCCRAC | 2 cut(s) | 2298, 3271 |
| Mox20I | TGGCCA | 1 cut(s) | 3235 |
| Mph1103I | ATGCAT | 2 cut(s) | 933, 2278 |
| MroXI | GAANNNNTTC | 3 cut(s) | 199, 1896, 2754 |
| MscI | TGGCCA | 1 cut(s) | 3235 |
| MseI | TTAA | 8 cut(s) | 708, 1331, 1449, 1461, 2223, 2546, 2780, 2922 |
| MslI | CAYNNNNRTG | 6 cut(s) | 767, 1218, 2529, 2637, 2808, 3078 |
| Msp20I | TGGCCA | 1 cut(s) | 3235 |
| MspA1I | CMGCKG | 5 cut(s) | 136, 173, 1088, 3218, 3610 |
| MspCI | CTTAAG | 1 cut(s) | 1448 |
| MspR9I | CCNGG | 7 cut(s) | 36, 37, 97, 1417, 3077, 3318, 3395 |
| MunI | CAATTG | 2 cut(s) | 1671, 1979 |
| Mva1269I | GAATGC | 4 cut(s) | 443, 933, 1306, 2536 |
| MvaI | CCWGG | 4 cut(s) | 97, 3077, 3318, 3395 |
| MvnI | CGCG | 1 cut(s) | 173 |
| NciI | CCSGG | 3 cut(s) | 36, 37, 1417 |
| NcoI | CCATGG | 1 cut(s) | 190 |
| NlaIV | GGNNCC | 7 cut(s) | 32, 132, 196, 649, 1954, 2437, 3311 |
| NmeAIII | GCCGAG | 2 cut(s) | 167, 334 |
| NmuCI | GTSAC | 4 cut(s) | 1211, 2137, 2549, 2939 |
| NsiI | ATGCAT | 2 cut(s) | 933, 2278 |
| NspI | RCATGY | 6 cut(s) | 1402, 1482, 1921, 1933, 2617, 3523 |
| OliI | CACNNNNGTG | 1 cut(s) | 1218 |
| PaeR7I | CTCGAG | 2 cut(s) | 2843, 3445 |
| PagI | TCATGA | 4 cut(s) | 2644, 2760, 2871, 3139 |
| PaqCI | CACCTGC | 1 cut(s) | 59 |
| PciI | ACATGT | 3 cut(s) | 1398, 1478, 1929 |
| PctI | GAATGC | 4 cut(s) | 443, 933, 1306, 2536 |
| PdmI | GAANNNNTTC | 3 cut(s) | 199, 1896, 2754 |
| PfoI | TCCNGGA | 2 cut(s) | 1415, 3393 |
| PleI | GAGTC | 3 cut(s) | 98, 2144, 3437 |
| PpsI | GAGTC | 3 cut(s) | 98, 2144, 3437 |
| PpuMI | RGGWCCY | 1 cut(s) | 702 |
| PscI | ACATGT | 3 cut(s) | 1398, 1478, 1929 |
| PshAI | GACNNNNGTC | 1 cut(s) | 447 |
| PshBI | ATTAAT | 1 cut(s) | 2922 |
| PsiI | TTATAA | 2 cut(s) | 282, 1850 |
| Psp124BI | GAGCTC | 2 cut(s) | 2974, 3547 |
| Psp5II | RGGWCCY | 1 cut(s) | 702 |
| Psp6I | CCWGG | 4 cut(s) | 95, 3075, 3316, 3393 |
| PspEI | GGTNACC | 1 cut(s) | 1546 |
| PspFI | CCCAGC | 1 cut(s) | 325 |
| PspGI | CCWGG | 4 cut(s) | 95, 3075, 3316, 3393 |
| PspN4I | GGNNCC | 7 cut(s) | 32, 132, 196, 649, 1954, 2437, 3311 |
| PspPI | GGNCC | 3 cut(s) | 449, 702, 1139 |
| PspPPI | RGGWCCY | 1 cut(s) | 702 |
| PspXI | VCTCGAGB | 1 cut(s) | 3445 |
| PstI | CTGCAG | 3 cut(s) | 405, 1276, 3379 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1646, 3383 |
| PsuI | RGATCY | 4 cut(s) | 104, 817, 3107, 3379 |
| PvuII | CAGCTG | 2 cut(s) | 3218, 3610 |
| RsaI | GTAC | 7 cut(s) | 543, 1129, 1944, 1975, 2826, 3373, 3512 |
| RsaNI | GTAC | 7 cut(s) | 542, 1128, 1943, 1974, 2825, 3372, 3511 |
| RseI | CAYNNNNRTG | 6 cut(s) | 767, 1218, 2529, 2637, 2808, 3078 |
| SacI | GAGCTC | 2 cut(s) | 2974, 3547 |
| SacII | CCGCGG | 1 cut(s) | 174 |
| SaqAI | TTAA | 8 cut(s) | 708, 1331, 1449, 1461, 2223, 2546, 2780, 2922 |
| Sau96I | GGNCC | 3 cut(s) | 449, 702, 1139 |
| SchI | GAGTC | 3 cut(s) | 99, 2145, 3437 |
| ScrFI | CCNGG | 7 cut(s) | 36, 37, 97, 1417, 3077, 3318, 3395 |
| SduI | GDGCHC | 9 cut(s) | 35, 216, 565, 652, 1175, 1661, 2485, 2974, 3547 |
| SfcI | CTRYAG | 4 cut(s) | 401, 1216, 1272, 3375 |
| Sfr274I | CTCGAG | 2 cut(s) | 2843, 3445 |
| Sfr303I | CCGCGG | 1 cut(s) | 174 |
| SgrBI | CCGCGG | 1 cut(s) | 174 |
| SinI | GGWCC | 2 cut(s) | 449, 702 |
| SlaI | CTCGAG | 2 cut(s) | 2843, 3445 |
| SmaI | CCCGGG | 1 cut(s) | 37 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 767, 1218, 2529, 2637, 2808, 3078 |
| SmlI | CTYRAG | 7 cut(s) | 1448, 1584, 1813, 2254, 2843, 2965, 3445 |
| SmoI | CTYRAG | 7 cut(s) | 1448, 1584, 1813, 2254, 2843, 2965, 3445 |
| SspI | AATATT | 3 cut(s) | 1702, 2121, 2926 |
| SspMI | CTAG | 8 cut(s) | 251, 384, 546, 941, 1326, 1862, 2283, 3134 |
| SstI | GAGCTC | 2 cut(s) | 2974, 3547 |
| StyD4I | CCNGG | 7 cut(s) | 34, 35, 95, 1415, 3075, 3316, 3393 |
| StyI | CCWWGG | 4 cut(s) | 190, 1001, 1513, 2889 |
| TaiI | ACGT | 1 cut(s) | 843 |
| TaqI | TCGA | 6 cut(s) | 44, 232, 263, 2188, 2844, 3446 |
| TatI | WGTACW | 1 cut(s) | 3371 |
| TauI | GCSGC | 6 cut(s) | 127, 136, 176, 179, 1088, 1367 |
| Tru1I | TTAA | 8 cut(s) | 708, 1331, 1449, 1461, 2223, 2546, 2780, 2922 |
| Tru9I | TTAA | 8 cut(s) | 708, 1331, 1449, 1461, 2223, 2546, 2780, 2922 |
| TseFI | GTSAC | 4 cut(s) | 1211, 2137, 2549, 2939 |
| Tsp45I | GTSAC | 4 cut(s) | 1211, 2137, 2549, 2939 |
| TspGWI | ACGGA | 5 cut(s) | 2466, 2842, 3046, 3054, 3570 |
| TspMI | CCCGGG | 1 cut(s) | 35 |
| Vha464I | CTTAAG | 1 cut(s) | 1448 |
| VpaK11BI | GGWCC | 2 cut(s) | 449, 702 |
| VspI | ATTAAT | 1 cut(s) | 2922 |
| XapI | RAATTY | 4 cut(s) | 234, 1879, 2584, 3413 |
| XbaI | TCTAGA | 5 cut(s) | 940, 1325, 1861, 2282, 3133 |
| XceI | RCATGY | 6 cut(s) | 1402, 1482, 1921, 1933, 2617, 3523 |
| XhoI | CTCGAG | 2 cut(s) | 2843, 3445 |
| XmaI | CCCGGG | 1 cut(s) | 35 |
| XmnI | GAANNNNTTC | 3 cut(s) | 199, 1896, 2754 |
| XspI | CTAG | 8 cut(s) | 251, 384, 546, 941, 1326, 1862, 2283, 3134 |
| Zsp2I | ATGCAT | 2 cut(s) | 933, 2278 |