Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0005221

Physical Location & Seq

Genomic Coordinates Forward (+)

34851080 .. 34855528

Gene Structure 4449 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1286700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGAATTTTCAGCAAGAGAAGTTCGTCAGGTTTCAGGACTGCACTGCAGAGAAAAATGTTGAGCCATTATATTCTCCAGATGATGATATGCCACCAGGGAAGTTCAGAAGAACGATTAACTCGGTCTCAGCCAAATTCCAAAGACGCTTGGAATCTGGTTCTGAGCTGATTAAAAAGTCATGGAAATCTTATTCAATTGACAGTGTTGTCGCCAACAGCTTTGGTGGTAGAATTCTTGATCCTCAAGGGCCATTCCTTCAGAAGTGGAATAAGATATTTGTATTGGCATGTATTGTTGCTGTCTCCCTTGATCCCTTGTTCTTTTACATCCCGGTGATTGATGATGCAAACAAGTGCCTTGGTTTGGACAGGAAGATGGAGATAACAGCTAGTGTTTTGCGTTCATTCACAGATATATTTTATATTGTTCACATAATTTTCCAGTTTCGTACTGGATTTATTGCTCCTTCTTCTCGAGTGTTTGGAAGAGGTGTTTTAGTTCAAGATGCTTGGGCCATTGCAAGGAGGTATCTCTCATCATACTTCGTAATTGACATTCTTGCAGTCCTGCCTCTCCCACAAGTGGTTATTCTAATTTTCATTCCCAAATTGGGAGGCTCAAGAACGTTGAATACAAAGAATTTGTTGAAGTTTGTGGTTTTGTTCCAGTATCTTCCAAGGTTTATACGAATATATCCATTGTATAGAGAAGTCACAAGGGCATCTGGTATACTTACCGAAACTGCTTGGGCAGGAGCTGCATTTAATCTTTTTCTTTACATGCTTGCCAGTCATGTACTGGGAGCCTTTTGGTACTTGGTCTCTATAGAACGTGAAACCACGTGCTGGAAAGCAGCATGTGGGAACAATGCAACCATATGCTCGGGCAAGGATTTATACTGTGATACCGCGAGCTGGAATGCTTCCACATTCTTAAATTCTTCCTGCCCAATACAAGATGAAGACAAATTAAAGTTCGATTTTGGAATATTCCTTGATGCCCTTCAATCTGGTATTGTTGAGTCAAGCACGGATTTTCCTCAGAAATTCTTTTACTGTTTTTGGTGGGGCCTACGGAATTTGAGTTCCCTTGGTCAGAACCTTGCAACCAGTACATATGTATGGGAAATCTGCTTTGCAATCTTCATTTCTATCGCTGGATTGGTGCTATTTTCATTTCTCATCGGAAATATGCAGACATATTTGCAGTCTACAACCACAAGATTGGAGGAAATGAGAGTGAAAAGGAGAGATGCTGAACAATGGATGTCCCACCGCTTGCTACCCAATGATTTGAGAGAGCGCATCAGGCGGTACGAACAATATAAATGGCAAGAAACCAGAGGCGTTGATGAACAGAATTTGATATGTAATCTTCCGAAGGATCTTAGAAGGGACATAAAGCGCCATCTCTGTTTGGCTCTGCTTATGAGAGTGCCAATGTTCGAGAAAATGGATGAACAACTGCTCGATGCAATGTGTGACCGTCTCAAGCCGGTACTGTATACAGAGGCAAGCTATATCGTTCGGGAGGGAGACCCAGTCGACGAAATGCTCTTTATTATGCGGGGCAGGCTATTGACTATGACCACAAATGGTGGAAGAACCGGTTTCTTCAACTCAGAGTATCTCAAGGCCGGTGACTTTTGCGGCGAAGAACTTTTGACATGGGCTCTTGATCCCCACCCATCAGCTAATCTTCCCATCTCGACCAGAACTGTCCAAGCCCTTAGTGAAGTTGAAGCCTTTGCTTTAAAAGCGGATGACTTGAAGTTTGTAGCCTCTCAGTTCAGGAGACTCCACAGCAAGCAGCTCCGGCACACATTCAGGTTATACTCACAACAGTGGAGGACTTGGGCAGCCACTTTTATACAAGCAGCGTGGCGCCGCCATATGAAGAAGAAGCTAGAAGAGTCTCTGCAGGAAGAGGAGAATAGGCTGCAAGATGCATTGGCCAAGGCCGAGGCCAGCTCCCCAAGTCTAGGCGCCACCATTTATGCCTCCCGTTTTGCTGCTAATATACTGCGTACTTTACGGCGCAGTGGTACACGGAAGGCAAGGGTGCCAGAGAGACTACCGGCCATGCTACTTCAGAAGCCGGCGGAGCCTGATTTTACTGCTGAAGAACAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0008150 GO:0016020 GO:0016021 GO:0031224 GO:0031226 GO:0042391 GO:0044425 GO:0044459 GO:0044464 GO:0065007 GO:0065008 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

711

Amino Acids

81.8

Weight (kDa)

9.04

Isoelectric Point (pI)

51.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	90 - 408	3.6e-17	Ion transport protein
cNMP_binding	PF00027	502 - 593	1.3e-06	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53130
fragaria_vesca	FvH4_2g31110 FvH4_7g31200 FvH4_7g31200 FvH4_7g31200 FvH4_7g31200
malus_domestica	MD01G1217100.v1.1 MD01G1217300.v1.1 MD07G1286700.v1.1
prunus_persica	Prupe.2G308700_v2.0.a1 Prupe.2G308700_v2.0.a1 Prupe.2G308700_v2.0.a1
pyrus_communis	pycom01g22750 pycom07g26000
rosa_chinensis	RchiOBHm_Chr1g0380261 RchiOBHm_Chr1g0380301
rosa_laevigata	RLG00000026314
rosa_multiflora	Rmu_sc0001232.1_g000031 Rmu_sc0002387.1_g000001 Rmu_sc0002387.1_g000009 Rmu_sc0003249.1_g000001
rosa_roxburghii	Rroxscaffold_4G00279530
rosa_rugosa	Rorug01G0419600 Rorug01G0419700
rosa_samantha	Rh1AG444200 Rh1AG444300 Rh1CG412900
rosa_wichuraiana	Rw1G038580 Rw1G038650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	206
AccB1I	GGYRCC	3 cut(s)	1884, 1985, 2062
AccB7I	CCANNNNNTGG	1 cut(s)	846
AccI	GTMKAC	4 cut(s)	730, 1211, 1505, 1545
AccII	CGCG	1 cut(s)	911
AciI	CCGC	8 cut(s)	909, 1276, 1312, 1567, 1650, 1760, 1888, 2102
AclI	AACGTT	1 cut(s)	626
AclWI	GGATC	4 cut(s)	233, 305, 1392, 1673
AcoI	YGGCCR	2 cut(s)	1953, 2079
AcsI	RAATTY	8 cut(s)	4, 134, 231, 640, 937, 1046, 1078, 1360
AcuI	CTGAAG	2 cut(s)	242, 2075
AcvI	CACGTG	1 cut(s)	843
AcyI	GRCGYC	2 cut(s)	1885, 1986
AfaI	GTAC	8 cut(s)	451, 798, 815, 1114, 1316, 1500, 2029, 2047
AfiI	CCNNNNNNNGG	7 cut(s)	364, 522, 583, 611, 846, 915, 1982
AgeI	ACCGGT	1 cut(s)	1607
AgsI	TTSAA	8 cut(s)	195, 503, 631, 649, 1007, 1618, 1742, 1771
AjnI	CCWGG	1 cut(s)	94
AleI	CACNNNNGTG	1 cut(s)	1843
AloI	GAACNNNNNNTCC	2 cut(s)	1069, 1101
Alw26I	GTCTC	8 cut(s)	130, 307, 826, 1493, 1530, 1789, 1920, 2065
AlwI	GGATC	4 cut(s)	233, 305, 1392, 1673
AlwNI	CAGNNNCTG	1 cut(s)	758
Ama87I	CYCGRG	2 cut(s)	474, 883
AoxI	GGCC	8 cut(s)	248, 513, 1069, 1635, 1953, 1959, 1965, 2079
ApeKI	GCWGC	7 cut(s)	758, 854, 1810, 1859, 1877, 1939, 2012
ApoI	RAATTY	8 cut(s)	4, 134, 231, 640, 937, 1046, 1078, 1360
ArsI	GACNNNNNNTTYG	2 cut(s)	1757, 1789
AsiGI	ACCGGT	1 cut(s)	1607
AspLEI	GCGC	5 cut(s)	1305, 1407, 1887, 1988, 2040
AspS9I	GGNCC	3 cut(s)	248, 513, 1069
AsuC2I	CCSGG	1 cut(s)	332
AsuHPI	GGTGA	2 cut(s)	346, 1652
AvaI	CYCGRG	2 cut(s)	474, 883
BalI	TGGCCA	1 cut(s)	1955
BanI	GGYRCC	3 cut(s)	1884, 1985, 2062
BanII	GRGCYC	1 cut(s)	1675
BbrPI	CACGTG	1 cut(s)	843
BbsI	GAAGAC	1 cut(s)	969
BbvI	GCAGC	7 cut(s)	745, 866, 1822, 1871, 1889, 1926, 1999
BccI	CCATC	4 cut(s)	370, 1416, 1696, 1712
BceAI	ACGGC	1 cut(s)	2051
BciT130I	CCWGG	1 cut(s)	96
BcnI	CCSGG	1 cut(s)	332
BcoDI	GTCTC	8 cut(s)	130, 307, 826, 1493, 1530, 1789, 1920, 2065
BfaI	CTAG	3 cut(s)	390, 1907, 1982
BfmI	CTRYAG	3 cut(s)	45, 825, 1919
BfoI	RGCGCY	3 cut(s)	1408, 1888, 1989
BisI	GCNGC	9 cut(s)	759, 855, 1651, 1811, 1860, 1878, 1888, 1940, 2013
BlsI	GCNGC	9 cut(s)	760, 856, 1652, 1812, 1861, 1879, 1889, 1941, 2014
Bme1390I	CCNGG	2 cut(s)	96, 332
BmeT110I	CYCGRG	2 cut(s)	474, 883
BmgT120I	GGNCC	3 cut(s)	248, 513, 1069
BmiI	GGNNCC	6 cut(s)	805, 1070, 1886, 1987, 2064, 2106
BmrFI	CCNGG	2 cut(s)	96, 332
BmrI	ACTGGG	2 cut(s)	809, 1535
BmsI	GCATC	8 cut(s)	334, 496, 731, 988, 1243, 1314, 1462, 1936
BmuI	ACTGGG	2 cut(s)	809, 1535
BpiI	GAAGAC	1 cut(s)	969
BplI	GAGNNNNNCTC	2 cut(s)	1955, 1987
BpmI	CTGGAG	1 cut(s)	60
BpuEI	CTTGAG	4 cut(s)	228, 604, 1475, 1616
BpuMI	CCSGG	1 cut(s)	332
BsaAI	YACGTR	1 cut(s)	843
BsaHI	GRCGYC	2 cut(s)	1885, 1986
BsaI	GGTCTC	3 cut(s)	130, 826, 1530
BsaJI	CCNNGG	6 cut(s)	95, 358, 677, 1090, 1956, 1962
BsaWI	WCCGGW	1 cut(s)	1607
BsaXI	ACNNNNNCTCC	2 cut(s)	1527, 1557
Bsc4I	CCNNNNNNNGG	7 cut(s)	364, 522, 583, 611, 846, 915, 1982
Bse118I	RCCGGY	5 cut(s)	1495, 1607, 1637, 2077, 2098
Bse1I	ACTGG	7 cut(s)	442, 457, 667, 789, 804, 1110, 1541
Bse3DI	GCAATG	2 cut(s)	516, 1482
BseBI	CCWGG	1 cut(s)	96
BseDI	CCNNGG	6 cut(s)	95, 358, 677, 1090, 1956, 1962
BseGI	GGATG	4 cut(s)	327, 1272, 1462, 1768
BseLI	CCNNNNNNNGG	7 cut(s)	364, 522, 583, 611, 846, 915, 1982
BseMI	GCAATG	2 cut(s)	516, 1482
BseMII	CTCAG	5 cut(s)	141, 153, 1055, 1635, 1799
BseNI	ACTGG	7 cut(s)	442, 457, 667, 789, 804, 1110, 1541
BseRI	GAGGAG	1 cut(s)	1943
BseXI	GCAGC	7 cut(s)	745, 866, 1822, 1871, 1889, 1926, 1999
BsgI	GTGCAG	1 cut(s)	25
Bsh1236I	CGCG	1 cut(s)	911
BshFI	GGCC	8 cut(s)	250, 515, 1071, 1637, 1955, 1961, 1967, 2081
BshNI	GGYRCC	3 cut(s)	1884, 1985, 2062
BshTI	ACCGGT	1 cut(s)	1607
BsiHKCI	CYCGRG	2 cut(s)	474, 883
BsiSI	CCGG	7 cut(s)	332, 1496, 1608, 1638, 1816, 2078, 2099
BslFI	GGGAC	2 cut(s)	1255, 1409
BslI	CCNNNNNNNGG	7 cut(s)	364, 522, 583, 611, 846, 915, 1982
BsmAI	GTCTC	8 cut(s)	130, 307, 826, 1493, 1530, 1789, 1920, 2065
BsmBI	CGTCTC	1 cut(s)	1493
BsmFI	GGGAC	2 cut(s)	1255, 1409
BsmI	GAATGC	1 cut(s)	925
BsnI	GGCC	8 cut(s)	250, 515, 1071, 1637, 1955, 1961, 1967, 2081
Bso31I	GGTCTC	3 cut(s)	130, 826, 1530
BsoBI	CYCGRG	2 cut(s)	474, 883
Bsp1286I	GDGCHC	1 cut(s)	1675
Bsp143I	GATC	4 cut(s)	238, 310, 1384, 1678
BspACI	CCGC	8 cut(s)	909, 1276, 1312, 1567, 1650, 1760, 1888, 2102
BspANI	GGCC	8 cut(s)	250, 515, 1071, 1637, 1955, 1961, 1967, 2081
BspCNI	CTCAG	5 cut(s)	140, 154, 1054, 1634, 1798
BspFNI	CGCG	1 cut(s)	911
BspLI	GGNNCC	6 cut(s)	805, 1070, 1886, 1987, 2064, 2106
BspMAI	CTGCAG	2 cut(s)	49, 1923
BspPI	GGATC	4 cut(s)	233, 305, 1392, 1673
BspT107I	GGYRCC	3 cut(s)	1884, 1985, 2062
BspTNI	GGTCTC	3 cut(s)	130, 826, 1530
BsrDI	GCAATG	2 cut(s)	516, 1482
BsrFI	RCCGGY	5 cut(s)	1495, 1607, 1637, 2077, 2098
BsrI	ACTGG	7 cut(s)	442, 457, 667, 789, 804, 1110, 1541
BssAI	RCCGGY	5 cut(s)	1495, 1607, 1637, 2077, 2098
BssECI	CCNNGG	6 cut(s)	95, 358, 677, 1090, 1956, 1962
BssMI	GATC	4 cut(s)	238, 310, 1384, 1678
BssNAI	GTATAC	2 cut(s)	731, 1506
BssNI	GRCGYC	2 cut(s)	1885, 1986
BssT1I	CCWWGG	4 cut(s)	358, 677, 1090, 1956
Bst1107I	GTATAC	2 cut(s)	731, 1506
Bst2UI	CCWGG	1 cut(s)	96
Bst4CI	ACNGT	7 cut(s)	203, 902, 1058, 1487, 1503, 1720, 1845
Bst6I	CTCTTC	3 cut(s)	481, 1905, 1920
BstACI	GRCGYC	2 cut(s)	1885, 1986
BstAPI	GCANNNNNTGC	1 cut(s)	758
BstBAI	YACGTR	1 cut(s)	843
BstC8I	GCNNGC	8 cut(s)	786, 913, 1280, 1516, 1574, 1808, 1969, 2100
BstDEI	CTNAG	7 cut(s)	127, 162, 1041, 1388, 1621, 1730, 1785
BstF5I	GGATG	4 cut(s)	327, 1272, 1462, 1768
BstFNI	CGCG	1 cut(s)	911
BstH2I	RGCGCY	3 cut(s)	1408, 1888, 1989
BstHHI	GCGC	5 cut(s)	1305, 1407, 1887, 1988, 2040
BstKTI	GATC	4 cut(s)	241, 313, 1387, 1681
BstMAI	GTCTC	8 cut(s)	130, 307, 826, 1493, 1530, 1789, 1920, 2065
BstMBI	GATC	4 cut(s)	238, 310, 1384, 1678
BstMWI	GCNNNNNNNGC	6 cut(s)	758, 1309, 1573, 1757, 1816, 2104
BstNI	CCWGG	1 cut(s)	96
BstNSI	RCATGY	3 cut(s)	291, 784, 861
BstSCI	CCNGG	2 cut(s)	94, 330
BstSFI	CTRYAG	3 cut(s)	45, 825, 1919
BstUI	CGCG	1 cut(s)	911
BstV1I	GCAGC	7 cut(s)	745, 866, 1822, 1871, 1889, 1926, 1999
BstV2I	GAAGAC	1 cut(s)	969
BstX2I	RGATCY	1 cut(s)	1384
BstXI	CCANNNNNNTGG	1 cut(s)	1225
BstYI	RGATCY	1 cut(s)	1384
BstZ17I	GTATAC	2 cut(s)	731, 1506
BsuRI	GGCC	8 cut(s)	250, 515, 1071, 1637, 1955, 1961, 1967, 2081
BtsCI	GGATG	4 cut(s)	327, 1272, 1462, 1768
BtsI	GCAGTG	2 cut(s)	42, 2047
BtsIMutI	CAGTG	4 cut(s)	42, 208, 1850, 2047
Cac8I	GCNNGC	8 cut(s)	786, 913, 1280, 1516, 1574, 1808, 1969, 2100
CaiI	CAGNNNCTG	1 cut(s)	758
CfoI	GCGC	5 cut(s)	1305, 1407, 1887, 1988, 2040
Cfr10I	RCCGGY	5 cut(s)	1495, 1607, 1637, 2077, 2098
Cfr13I	GGNCC	3 cut(s)	248, 513, 1069
CseI	GACGC	1 cut(s)	153
Csp6I	GTAC	8 cut(s)	450, 797, 814, 1113, 1315, 1499, 2028, 2046
CspAI	ACCGGT	1 cut(s)	1607
CspCI	CAANNNNNGTGG	2 cut(s)	1862, 1897
CviAII	CATG	7 cut(s)	180, 288, 781, 794, 858, 1668, 2083
CviQI	GTAC	8 cut(s)	450, 797, 814, 1113, 1315, 1499, 2028, 2046
DdeI	CTNAG	7 cut(s)	127, 162, 1041, 1388, 1621, 1730, 1785
DinI	GGCGCC	2 cut(s)	1886, 1987
DpnI	GATC	4 cut(s)	240, 312, 1386, 1680
DpnII	GATC	4 cut(s)	238, 310, 1384, 1678
DraI	TTTAAA	1 cut(s)	1755
DrdI	GACNNNNNNGTC	1 cut(s)	206
DseDI	GACNNNNNNGTC	1 cut(s)	206
EaeI	YGGCCR	2 cut(s)	1953, 2079
Eam1104I	CTCTTC	3 cut(s)	481, 1905, 1920
EarI	CTCTTC	3 cut(s)	481, 1905, 1920
EciI	GGCGGA	1 cut(s)	2117
Eco130I	CCWWGG	4 cut(s)	358, 677, 1090, 1956
Eco24I	GRGCYC	1 cut(s)	1675
Eco31I	GGTCTC	3 cut(s)	130, 826, 1530
Eco57I	CTGAAG	2 cut(s)	242, 2075
Eco72I	CACGTG	1 cut(s)	843
Eco88I	CYCGRG	2 cut(s)	474, 883
EcoO109I	RGGNCCY	1 cut(s)	1069
EcoRI	GAATTC	1 cut(s)	231
EcoRII	CCWGG	1 cut(s)	94
EcoT14I	CCWWGG	4 cut(s)	358, 677, 1090, 1956
EcoT22I	ATGCAT	1 cut(s)	1951
EcoT38I	GRGCYC	1 cut(s)	1675
EgeI	GGCGCC	2 cut(s)	1886, 1987
EheI	GGCGCC	2 cut(s)	1886, 1987
ErhI	CCWWGG	4 cut(s)	358, 677, 1090, 1956
Esp3I	CGTCTC	1 cut(s)	1493
FaeI	CATG	7 cut(s)	183, 291, 784, 797, 861, 1671, 2086
FaqI	GGGAC	2 cut(s)	1255, 1409
FatI	CATG	7 cut(s)	179, 287, 780, 793, 857, 1667, 2082
FauI	CCCGC	1 cut(s)	1560
FauNDI	CATATG	3 cut(s)	878, 1117, 1893
FblI	GTMKAC	4 cut(s)	730, 1211, 1505, 1545
Fnu4HI	GCNGC	9 cut(s)	759, 855, 1651, 1811, 1860, 1878, 1888, 1940, 2013
FokI	GGATG	4 cut(s)	314, 1279, 1469, 1775
FriOI	GRGCYC	1 cut(s)	1675
Fsp4HI	GCNGC	9 cut(s)	759, 855, 1651, 1811, 1860, 1878, 1888, 1940, 2013
FspBI	CTAG	3 cut(s)	390, 1907, 1982
GlaI	GCGC	5 cut(s)	1304, 1406, 1886, 1987, 2039
GluI	GCNGC	9 cut(s)	759, 855, 1651, 1811, 1860, 1878, 1888, 1940, 2013
GsuI	CTGGAG	1 cut(s)	60
HaeII	RGCGCY	3 cut(s)	1408, 1888, 1989
HaeIII	GGCC	8 cut(s)	250, 515, 1071, 1637, 1955, 1961, 1967, 2081
HapII	CCGG	7 cut(s)	332, 1496, 1608, 1638, 1816, 2078, 2099
HgaI	GACGC	1 cut(s)	153
HhaI	GCGC	5 cut(s)	1305, 1407, 1887, 1988, 2040
Hin1I	GRCGYC	2 cut(s)	1885, 1986
Hin1II	CATG	7 cut(s)	183, 291, 784, 797, 861, 1671, 2086
Hin6I	GCGC	5 cut(s)	1303, 1405, 1885, 1986, 2038
HinP1I	GCGC	5 cut(s)	1303, 1405, 1885, 1986, 2038
HincII	GTYRAC	1 cut(s)	1546
HindII	GTYRAC	1 cut(s)	1546
HinfI	GANTC	4 cut(s)	152, 1022, 1797, 1913
HpaII	CCGG	7 cut(s)	332, 1496, 1608, 1638, 1816, 2078, 2099
HphI	GGTGA	2 cut(s)	346, 1652
Hpy166II	GTNNAC	6 cut(s)	430, 731, 1212, 1506, 1546, 2048
Hpy188I	TCNGA	9 cut(s)	107, 163, 261, 1044, 1098, 1187, 1380, 1624, 2094
Hpy8I	GTNNAC	6 cut(s)	430, 731, 1212, 1506, 1546, 2048
Hpy99I	CGWCG	1 cut(s)	1550
HpyAV	CCTTC	6 cut(s)	266, 477, 1013, 1375, 1386, 2047
HpyCH4III	ACNGT	7 cut(s)	203, 902, 1058, 1487, 1503, 1720, 1845
HpyCH4IV	ACGT	3 cut(s)	626, 832, 842
HpyF10VI	GCNNNNNNNGC	6 cut(s)	758, 1309, 1573, 1757, 1816, 2104
HpyF3I	CTNAG	7 cut(s)	127, 162, 1041, 1388, 1621, 1730, 1785
HpySE526I	ACGT	3 cut(s)	626, 832, 842
Hsp92I	GRCGYC	2 cut(s)	1885, 1986
Hsp92II	CATG	7 cut(s)	183, 291, 784, 797, 861, 1671, 2086
HspAI	GCGC	5 cut(s)	1303, 1405, 1885, 1986, 2038
KasI	GGCGCC	2 cut(s)	1884, 1985
KroI	GCCGGC	1 cut(s)	2098
KroNI	GCCGGC	1 cut(s)	2100
Kzo9I	GATC	4 cut(s)	238, 310, 1384, 1678
LmnI	GCTCC	6 cut(s)	469, 755, 803, 1818, 1976, 2104
Lsp1109I	GCAGC	7 cut(s)	745, 866, 1822, 1871, 1889, 1926, 1999
LweI	GCATC	8 cut(s)	334, 496, 731, 988, 1243, 1314, 1462, 1936
MaeI	CTAG	3 cut(s)	390, 1907, 1982
MaeII	ACGT	3 cut(s)	626, 832, 842
MaeIII	GTNAC	3 cut(s)	712, 1481, 1640
MalI	GATC	4 cut(s)	240, 312, 1386, 1680
MboI	GATC	4 cut(s)	238, 310, 1384, 1678
MfeI	CAATTG	1 cut(s)	195
MflI	RGATCY	1 cut(s)	1384
MhlI	GDGCHC	1 cut(s)	1675
MlsI	TGGCCA	1 cut(s)	1955
MluNI	TGGCCA	1 cut(s)	1955
Mly113I	GGCGCC	2 cut(s)	1885, 1986
MlyI	GAGTC	3 cut(s)	1031, 1791, 1922
Mox20I	TGGCCA	1 cut(s)	1955
Mph1103I	ATGCAT	1 cut(s)	1951
MroNI	GCCGGC	1 cut(s)	2098
MscI	TGGCCA	1 cut(s)	1955
MseI	TTAA	6 cut(s)	117, 171, 765, 935, 971, 1754
MslI	CAYNNNNRTG	3 cut(s)	332, 1120, 1843
Msp20I	TGGCCA	1 cut(s)	1955
MspI	CCGG	7 cut(s)	332, 1496, 1608, 1638, 1816, 2078, 2099
MspR9I	CCNGG	2 cut(s)	96, 332
MunI	CAATTG	1 cut(s)	195
Mva1269I	GAATGC	1 cut(s)	925
MvaI	CCWGG	1 cut(s)	96
MvnI	CGCG	1 cut(s)	911
MwoI	GCNNNNNNNGC	6 cut(s)	758, 1309, 1573, 1757, 1816, 2104
NaeI	GCCGGC	1 cut(s)	2100
NarI	GGCGCC	2 cut(s)	1885, 1986
NciI	CCSGG	1 cut(s)	332
NdeI	CATATG	3 cut(s)	878, 1117, 1893
NdeII	GATC	4 cut(s)	238, 310, 1384, 1678
NgoMIV	GCCGGC	1 cut(s)	2098
NlaIII	CATG	7 cut(s)	183, 291, 784, 797, 861, 1671, 2086
NlaIV	GGNNCC	6 cut(s)	805, 1070, 1886, 1987, 2064, 2106
NmeAIII	GCCGAG	1 cut(s)	1987
NmuCI	GTSAC	3 cut(s)	712, 1481, 1640
NsiI	ATGCAT	1 cut(s)	1951
NspI	RCATGY	3 cut(s)	291, 784, 861
OliI	CACNNNNGTG	1 cut(s)	1843
PaeR7I	CTCGAG	1 cut(s)	474
PctI	GAATGC	1 cut(s)	925
PdiI	GCCGGC	1 cut(s)	2100
PfeI	GAWTC	1 cut(s)	152
PflFI	GACNNNGTC	1 cut(s)	1541
PflMI	CCANNNNNTGG	1 cut(s)	846
PinAI	ACCGGT	1 cut(s)	1607
PkrI	GCNGC	9 cut(s)	760, 856, 1652, 1812, 1861, 1879, 1889, 1941, 2014
PleI	GAGTC	3 cut(s)	1030, 1791, 1921
PluTI	GGCGCC	2 cut(s)	1888, 1989
PmaCI	CACGTG	1 cut(s)	843
PmlI	CACGTG	1 cut(s)	843
PpsI	GAGTC	3 cut(s)	1030, 1791, 1921
Ppu21I	YACGTR	1 cut(s)	843
Psp1406I	AACGTT	1 cut(s)	626
Psp6I	CCWGG	1 cut(s)	94
PspCI	CACGTG	1 cut(s)	843
PspGI	CCWGG	1 cut(s)	94
PspN4I	GGNNCC	6 cut(s)	805, 1070, 1886, 1987, 2064, 2106
PspPI	GGNCC	3 cut(s)	248, 513, 1069
PsrI	GAACNNNNNNTAC	2 cut(s)	616, 648
PstI	CTGCAG	2 cut(s)	49, 1923
PstNI	CAGNNNCTG	1 cut(s)	758
PsuI	RGATCY	1 cut(s)	1384
PsyI	GACNNNGTC	1 cut(s)	1541
RsaI	GTAC	8 cut(s)	451, 798, 815, 1114, 1316, 1500, 2029, 2047
RsaNI	GTAC	8 cut(s)	450, 797, 814, 1113, 1315, 1499, 2028, 2046
RseI	CAYNNNNRTG	3 cut(s)	332, 1120, 1843
SalI	GTCGAC	1 cut(s)	1544
SaqAI	TTAA	6 cut(s)	117, 171, 765, 935, 971, 1754
SatI	GCNGC	9 cut(s)	759, 855, 1651, 1811, 1860, 1878, 1888, 1940, 2013
Sau3AI	GATC	4 cut(s)	238, 310, 1384, 1678
Sau96I	GGNCC	3 cut(s)	248, 513, 1069
SchI	GAGTC	3 cut(s)	1031, 1791, 1922
ScrFI	CCNGG	2 cut(s)	96, 332
SduI	GDGCHC	1 cut(s)	1675
SfaNI	GCATC	8 cut(s)	334, 496, 731, 988, 1243, 1314, 1462, 1936
SfcI	CTRYAG	3 cut(s)	45, 825, 1919
SfoI	GGCGCC	2 cut(s)	1886, 1987
Sfr274I	CTCGAG	1 cut(s)	474
SlaI	CTCGAG	1 cut(s)	474
SmiMI	CAYNNNNRTG	3 cut(s)	332, 1120, 1843
SmlI	CTYRAG	5 cut(s)	243, 474, 619, 1490, 1631
SmoI	CTYRAG	5 cut(s)	243, 474, 619, 1490, 1631
SsiI	CCGC	8 cut(s)	909, 1276, 1312, 1567, 1650, 1760, 1888, 2102
SspDI	GGCGCC	2 cut(s)	1884, 1985
SspI	AATATT	1 cut(s)	990
SspMI	CTAG	3 cut(s)	390, 1907, 1982
StyD4I	CCNGG	2 cut(s)	94, 330
StyI	CCWWGG	4 cut(s)	358, 677, 1090, 1956
TaaI	ACNGT	7 cut(s)	203, 902, 1058, 1487, 1503, 1720, 1845
TaiI	ACGT	3 cut(s)	629, 835, 845
TaqI	TCGA	6 cut(s)	475, 978, 1446, 1470, 1545, 1709
TaqII	GACCGA	1 cut(s)	112
TatI	WGTACW	2 cut(s)	796, 1112
TauI	GCSGC	2 cut(s)	1653, 1890
TfiI	GAWTC	1 cut(s)	152
Tru1I	TTAA	6 cut(s)	117, 171, 765, 935, 971, 1754
Tru9I	TTAA	6 cut(s)	117, 171, 765, 935, 971, 1754
TscAI	CASTG	4 cut(s)	49, 208, 1850, 2047
TseFI	GTSAC	3 cut(s)	712, 1481, 1640
TseI	GCWGC	7 cut(s)	758, 854, 1810, 1859, 1877, 1939, 2012
Tsp45I	GTSAC	3 cut(s)	712, 1481, 1640
TspDTI	ATGAA	9 cut(s)	17, 393, 589, 975, 1135, 1164, 1368, 1473, 1910
TspGWI	ACGGA	3 cut(s)	1046, 1090, 2065
TspRI	CASTG	4 cut(s)	49, 208, 1850, 2047
Tth111I	GACNNNGTC	1 cut(s)	1541
Van91I	CCANNNNNTGG	1 cut(s)	846
XapI	RAATTY	8 cut(s)	4, 134, 231, 640, 937, 1046, 1078, 1360
XceI	RCATGY	3 cut(s)	291, 784, 861
XcmI	CCANNNNNNNNNTGG	2 cut(s)	449, 796
XhoI	CTCGAG	1 cut(s)	474
XmiI	GTMKAC	4 cut(s)	730, 1211, 1505, 1545
XspI	CTAG	3 cut(s)	390, 1907, 1982
Zsp2I	ATGCAT	1 cut(s)	1951

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.