Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0005221

Physical Location & Seq

Genomic Coordinates Reverse (-)

52146351 .. 52150476

Gene Structure 4126 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0419600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGGAACGAGACGATGTAGATGGCTCTATTCAACAACACCAATCTCTCCCGCGTGCACAGCTTGACGCCCAAGCCTCCCTTCTGAGCTGCACGCTTTCATTGGACCACGTCGGCCAAGTTAGCCTCTCCTTCAACTCTGATGGGTTGTCTTGGAGATTGCTCGAGCCATTGGACAATGATGACTCAACTTGTTTGTGCATCAAATTTGCTTCAAAGGTTGCAACAACCGAGATCAAGTTTGCAGATGTGTATGCTGTTGAGCTGATCAACTATGGCGTGATTCATGGATCAAATGTCTCAAATGCTCGAAAATGCCTTAAGGGTCAACGTGTCTCTGAGACGTACCGCTTTACAGTGCATGGTTTCCAGAGCTCAAGGACTCTTCCGTCTGTTCGGGTCCTTGCTACATATACATTTGGTCATAAGGATCTCCATATATGTCAGATTTGGGTCAATCAAATCAAGGCTTCTCTGGACTTAGAGCAGGGGAGGCCAAAGAATCTTCTGGTTTTTGTTCATCCAAGGAGTGGGAAGGGAAATGGCTGCAAAACTTGGGACAGTGTGGCTCCTATATTCTCCCGTGCTAAAGTGAAAACAAAGGTGATTGTGACCGAAAGGGCAGGGCATGCATATGATGTGATGGCAACTATAGGGAACAAGGAGCTTATTTCATATGATGGAGTGATAGCTGTTGGTGGTGATGGTTTTTTCAACGAAATTCTTAATGGATTTCTTTCTTCAAGGCATAAAGCTCCATATCCACCAACTCCTTCAGATTTCCTTGATTCTGCTAGTTGTAATGAGAGTCTCATTGTAAATGATCCAAGTGAAACCGTTATTGAAGCTTCTTCTCAGAATAATGAGCAGTCTCCCCTCCTCTCAAGTTCAAGTATTAATGGCTCAGGAGTCTTAAATATCAATCAAGAGCCTGAGATTTCCCTCCCCAATGAACATTTAAGATTTGGACTCATTCCTGCTGGCTCAACTGATGCCATTGTGATGTGTACAACTGGGGCTCGAGATCCTATAACATCTGCATTTCACATTGTCCTCGGTAAAAGAGTGTGGCTTGATGTAGCCCAAGTTGTGAGGTGGAAAACAGAATCTACATCGGAGGTTGAACCTTATGTGCGCTATGCAGCTTCTTTTGCTGGGTATGGATTTTATGGAGATGTCATTACAGAGAGTGAAAAGTACCGTTGGATGGGACCTAAACGATATGATTATGCAGGAACAAGGGTGTTTATGAGGCACAGGTCCTATCAGGCAGAAATAGCATATTTAGATGTCAAATCAGAAGAACGAGATTCAACTTCTGAGAAAAATAATCTTGGTGGTCGCAAGAGACCATTTTGGAGCTCAAATAAATCTGAAAAGGTGATATGCCGTGCCAACTGCAACGTTTGTTGCACCAAGCCTATTCACGGGTCCACAGATGATTCCCATACGACCCCTAACTCACATGCAGGAGAGACAAAATGGTCCAGTTCCAAGGGAAAGTTTCTCAGTGTCGGTGCTGCAGTAATTTCTTGTAGAAATGAAAAAGCACCTGATGGTTTGGTGGCTGATGCGCATCTTTCAGATGGTTTCCTCCATCTCATATTGATCAAAGACTGTCCTCATGCTCTCTATCTTTGGCATCTTACACAGCTTGCAAGGAAAGGTGGAAATCCTTTTGATTTTAAGTTTGTGGAACACCACAAGACCCCTGCTTTTACATTTACTTCTTCTGGCAATGAGAGTGTTTGGAATTTGGATGGTGAAGCATTTCAAGCACATCAACTATCAGCACAAGTATTCCGGGGTCTTGTCAGCTTGTTCGCCACTGGTCCTGAAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0008150 GO:0016020 GO:0016021 GO:0031224 GO:0031226 GO:0042391 GO:0044425 GO:0044459 GO:0044464 GO:0065007 GO:0065008 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

613

Amino Acids

67.6

Weight (kDa)

6.74

Isoelectric Point (pI)

43.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAGK_cat	PF00781	168 - 251	1.4e-16	Diacylglycerol kinase catalytic domain
CERK_C	PF19280	477 - 568	4.2e-10	Ceramide kinase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53130
fragaria_vesca	FvH4_2g31110 FvH4_7g31200 FvH4_7g31200 FvH4_7g31200 FvH4_7g31200
malus_domestica	MD01G1217100.v1.1 MD01G1217300.v1.1 MD07G1286700.v1.1
prunus_persica	Prupe.2G308700_v2.0.a1 Prupe.2G308700_v2.0.a1 Prupe.2G308700_v2.0.a1
pyrus_communis	pycom01g22750 pycom07g26000
rosa_chinensis	RchiOBHm_Chr1g0380261 RchiOBHm_Chr1g0380301
rosa_laevigata	RLG00000026314
rosa_multiflora	Rmu_sc0001232.1_g000031 Rmu_sc0002387.1_g000001 Rmu_sc0002387.1_g000009 Rmu_sc0003249.1_g000001
rosa_roxburghii	Rroxscaffold_4G00279530
rosa_rugosa	Rorug01G0419600 Rorug01G0419700
rosa_samantha	Rh1AG444200 Rh1AG444300 Rh1CG412900
rosa_wichuraiana	Rw1G038580 Rw1G038650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	385, 1480
Acc16I	TGCGCA	1 cut(s)	1572
AccB7I	CCANNNNNTGG	1 cut(s)	527
AccII	CGCG	1 cut(s)	52
AciI	CCGC	2 cut(s)	50, 346
AclI	AACGTT	1 cut(s)	1401
AclWI	GGATC	4 cut(s)	295, 435, 815, 1016
AcoI	YGGCCR	1 cut(s)	112
AcsI	RAATTY	3 cut(s)	203, 717, 1750
AcuI	CTGAAG	1 cut(s)	756
AcyI	GRCGYC	1 cut(s)	66
AfaI	GTAC	3 cut(s)	344, 1006, 1196
AfiI	CCNNNNNNNGG	3 cut(s)	527, 1204, 1424
AflII	CTTAAG	1 cut(s)	317
AflIII	ACRYGT	1 cut(s)	328
AjiI	CACGTC	1 cut(s)	109
AjuI	GAANNNNNNNTTGG	2 cut(s)	63, 95
Alw21I	GWGCWC	3 cut(s)	58, 374, 1361
Alw26I	GTCTC	8 cut(s)	3, 301, 332, 337, 812, 873, 1339, 1466
Alw44I	GTGCAC	1 cut(s)	54
AlwI	GGATC	4 cut(s)	295, 435, 815, 1016
Ama87I	CYCGRG	2 cut(s)	161, 1017
AoxI	GGCC	2 cut(s)	112, 491
ApaLI	GTGCAC	1 cut(s)	54
ApeKI	GCWGC	4 cut(s)	87, 543, 1139, 1517
ApoI	RAATTY	3 cut(s)	203, 717, 1750
AseI	ATTAAT	1 cut(s)	894
Asp700I	GAANNNNTTC	1 cut(s)	1767
AspLEI	GCGC	2 cut(s)	1134, 1573
AspS9I	GGNCC	7 cut(s)	103, 397, 1208, 1257, 1428, 1482, 1829
AsuC2I	CCSGG	1 cut(s)	1802
AsuHPI	GGTGA	4 cut(s)	613, 710, 1390, 1772
AvaI	CYCGRG	2 cut(s)	161, 1017
AvaII	GGWCC	7 cut(s)	103, 397, 1208, 1257, 1428, 1482, 1829
BaeGI	GKGCMC	1 cut(s)	58
BanII	GRGCYC	3 cut(s)	374, 1018, 1361
Bbv12I	GWGCWC	3 cut(s)	58, 374, 1361
BbvI	GCAGC	4 cut(s)	74, 530, 1151, 1504
BceAI	ACGGC	1 cut(s)	1371
BclI	TGATCA	2 cut(s)	264, 1605
BcnI	CCSGG	1 cut(s)	1802
BcoDI	GTCTC	8 cut(s)	3, 301, 332, 337, 812, 873, 1339, 1466
BfaI	CTAG	1 cut(s)	792
BfmI	CTRYAG	2 cut(s)	648, 1518
BfrI	CTTAAG	1 cut(s)	317
BisI	GCNGC	4 cut(s)	88, 544, 1140, 1518
BlsI	GCNGC	4 cut(s)	89, 545, 1141, 1519
Bme1390I	CCNGG	1 cut(s)	1802
Bme18I	GGWCC	7 cut(s)	103, 397, 1208, 1257, 1428, 1482, 1829
BmeT110I	CYCGRG	2 cut(s)	161, 1017
BmgBI	CACGTC	1 cut(s)	109
BmgT120I	GGNCC	7 cut(s)	103, 397, 1208, 1257, 1428, 1482, 1829
BmiI	GGNNCC	4 cut(s)	398, 567, 1209, 1429
BmrFI	CCNGG	1 cut(s)	1802
BmrI	ACTGGG	1 cut(s)	1020
BmsI	GCATC	5 cut(s)	207, 979, 1558, 1582, 1648
BmuI	ACTGGG	1 cut(s)	1020
Bpu10I	CCTNAGC	1 cut(s)	901
BpuEI	CTTGAG	2 cut(s)	358, 865
BpuMI	CCSGG	1 cut(s)	1802
BsaBI	GATNNNNATC	1 cut(s)	1572
BsaHI	GRCGYC	1 cut(s)	66
BsaI	GGTCTC	1 cut(s)	1339
BsaJI	CCNNGG	4 cut(s)	521, 1051, 1491, 1801
Bsc4I	CCNNNNNNNGG	3 cut(s)	527, 1204, 1424
Bse1I	ACTGG	3 cut(s)	1015, 1485, 1831
Bse3DI	GCAATG	1 cut(s)	1741
Bse8I	GATNNNNATC	1 cut(s)	1572
BseDI	CCNNGG	4 cut(s)	521, 1051, 1491, 1801
BseGI	GGATG	3 cut(s)	517, 1209, 1762
BseJI	GATNNNNATC	1 cut(s)	1572
BseLI	CCNNNNNNNGG	3 cut(s)	527, 1204, 1424
BseMI	GCAATG	1 cut(s)	1741
BseMII	CTCAG	7 cut(s)	74, 327, 866, 915, 921, 1308, 1519
BseNI	ACTGG	3 cut(s)	1015, 1485, 1831
BseRI	GAGGAG	1 cut(s)	866
BseSI	GKGCMC	1 cut(s)	58
BseXI	GCAGC	4 cut(s)	74, 530, 1151, 1504
BseYI	CCCAGC	1 cut(s)	1151
BsgI	GTGCAG	1 cut(s)	73
Bsh1236I	CGCG	1 cut(s)	52
BshFI	GGCC	2 cut(s)	114, 493
BsiHKAI	GWGCWC	3 cut(s)	58, 374, 1361
BsiHKCI	CYCGRG	2 cut(s)	161, 1017
BsiSI	CCGG	1 cut(s)	1801
BslFI	GGGAC	2 cut(s)	569, 1221
BslI	CCNNNNNNNGG	3 cut(s)	527, 1204, 1424
BsmAI	GTCTC	8 cut(s)	3, 301, 332, 337, 812, 873, 1339, 1466
BsmBI	CGTCTC	2 cut(s)	3, 332
BsmFI	GGGAC	2 cut(s)	569, 1221
BsnI	GGCC	2 cut(s)	114, 493
Bso31I	GGTCTC	1 cut(s)	1339
BsoBI	CYCGRG	2 cut(s)	161, 1017
Bsp1286I	GDGCHC	4 cut(s)	58, 374, 1018, 1361
Bsp1407I	TGTACA	1 cut(s)	1004
Bsp143I	GATC	7 cut(s)	231, 264, 287, 427, 820, 1021, 1605
BspACI	CCGC	2 cut(s)	50, 346
BspANI	GGCC	2 cut(s)	114, 493
BspCNI	CTCAG	7 cut(s)	75, 328, 865, 914, 922, 1309, 1518
BspFNI	CGCG	1 cut(s)	52
BspLI	GGNNCC	4 cut(s)	398, 567, 1209, 1429
BspMAI	CTGCAG	1 cut(s)	1522
BspPI	GGATC	4 cut(s)	295, 435, 815, 1016
BspTI	CTTAAG	1 cut(s)	317
BspTNI	GGTCTC	1 cut(s)	1339
BsrDI	GCAATG	1 cut(s)	1741
BsrGI	TGTACA	1 cut(s)	1004
BsrI	ACTGG	3 cut(s)	1015, 1485, 1831
BssECI	CCNNGG	4 cut(s)	521, 1051, 1491, 1801
BssMI	GATC	7 cut(s)	231, 264, 287, 427, 820, 1021, 1605
BssNI	GRCGYC	1 cut(s)	66
BssT1I	CCWWGG	2 cut(s)	521, 1491
Bst4CI	ACNGT	5 cut(s)	355, 560, 835, 1199, 1616
Bst6I	CTCTTC	1 cut(s)	387
BstACI	GRCGYC	1 cut(s)	66
BstAFI	CTTAAG	1 cut(s)	317
BstAPI	GCANNNNNTGC	1 cut(s)	626
BstAUI	TGTACA	1 cut(s)	1004
BstC8I	GCNNGC	5 cut(s)	54, 92, 627, 979, 1653
BstDEI	CTNAG	8 cut(s)	83, 336, 478, 852, 901, 930, 1317, 1505
BstF5I	GGATG	3 cut(s)	517, 1209, 1762
BstFNI	CGCG	1 cut(s)	52
BstHHI	GCGC	2 cut(s)	1134, 1573
BstKTI	GATC	7 cut(s)	234, 267, 290, 430, 823, 1024, 1608
BstMAI	GTCTC	8 cut(s)	3, 301, 332, 337, 812, 873, 1339, 1466
BstMBI	GATC	7 cut(s)	231, 264, 287, 427, 820, 1021, 1605
BstMWI	GCNNNNNNNGC	7 cut(s)	58, 120, 490, 626, 1148, 1274, 1772
BstNSI	RCATGY	2 cut(s)	629, 1466
BstSCI	CCNGG	1 cut(s)	1800
BstSFI	CTRYAG	2 cut(s)	648, 1518
BstSLI	GKGCMC	1 cut(s)	58
BstUI	CGCG	1 cut(s)	52
BstV1I	GCAGC	4 cut(s)	74, 530, 1151, 1504
BstX2I	RGATCY	2 cut(s)	427, 1021
BstYI	RGATCY	2 cut(s)	427, 1021
BsuRI	GGCC	2 cut(s)	114, 493
BtrI	CACGTC	1 cut(s)	109
BtsCI	GGATG	3 cut(s)	517, 1209, 1762
BtsIMutI	CAGTG	4 cut(s)	360, 565, 1513, 1824
Cac8I	GCNNGC	5 cut(s)	54, 92, 627, 979, 1653
CfoI	GCGC	2 cut(s)	1134, 1573
Cfr13I	GGNCC	7 cut(s)	103, 397, 1208, 1257, 1428, 1482, 1829
CseI	GACGC	1 cut(s)	74
Csp6I	GTAC	3 cut(s)	343, 1005, 1195
CviAII	CATG	5 cut(s)	284, 359, 626, 1463, 1622
CviQI	GTAC	3 cut(s)	343, 1005, 1195
DdeI	CTNAG	8 cut(s)	83, 336, 478, 852, 901, 930, 1317, 1505
DpnI	GATC	7 cut(s)	233, 266, 289, 429, 822, 1023, 1607
DpnII	GATC	7 cut(s)	231, 264, 287, 427, 820, 1021, 1605
DrdI	GACNNNNNNGTC	2 cut(s)	385, 1480
DseDI	GACNNNNNNGTC	2 cut(s)	385, 1480
EaeI	YGGCCR	1 cut(s)	112
Eam1104I	CTCTTC	1 cut(s)	387
EarI	CTCTTC	1 cut(s)	387
Ecl136II	GAGCTC	2 cut(s)	372, 1359
Eco130I	CCWWGG	2 cut(s)	521, 1491
Eco24I	GRGCYC	3 cut(s)	374, 1018, 1361
Eco31I	GGTCTC	1 cut(s)	1339
Eco47I	GGWCC	7 cut(s)	103, 397, 1208, 1257, 1428, 1482, 1829
Eco53kI	GAGCTC	2 cut(s)	372, 1359
Eco57I	CTGAAG	1 cut(s)	756
Eco88I	CYCGRG	2 cut(s)	161, 1017
EcoICRI	GAGCTC	2 cut(s)	372, 1359
EcoO109I	RGGNCCY	3 cut(s)	397, 1208, 1257
EcoT14I	CCWWGG	2 cut(s)	521, 1491
EcoT22I	ATGCAT	1 cut(s)	631
EcoT38I	GRGCYC	3 cut(s)	374, 1018, 1361
ErhI	CCWWGG	2 cut(s)	521, 1491
Esp3I	CGTCTC	2 cut(s)	3, 332
FaeI	CATG	5 cut(s)	287, 362, 629, 1466, 1625
FalI	AAGNNNNNCTT	2 cut(s)	63, 95
FaqI	GGGAC	2 cut(s)	569, 1221
FatI	CATG	5 cut(s)	283, 358, 625, 1462, 1621
FauI	CCCGC	1 cut(s)	57
FauNDI	CATATG	2 cut(s)	631, 673
FbaI	TGATCA	2 cut(s)	264, 1605
Fnu4HI	GCNGC	4 cut(s)	88, 544, 1140, 1518
FokI	GGATG	3 cut(s)	504, 1216, 1769
FriOI	GRGCYC	3 cut(s)	374, 1018, 1361
Fsp4HI	GCNGC	4 cut(s)	88, 544, 1140, 1518
FspAI	RTGCGCAY	1 cut(s)	1572
FspBI	CTAG	1 cut(s)	792
FspI	TGCGCA	1 cut(s)	1572
GlaI	GCGC	2 cut(s)	1133, 1572
GluI	GCNGC	4 cut(s)	88, 544, 1140, 1518
GsaI	CCCAGC	1 cut(s)	1155
HaeIII	GGCC	2 cut(s)	114, 493
HapII	CCGG	1 cut(s)	1801
HgaI	GACGC	1 cut(s)	74
HhaI	GCGC	2 cut(s)	1134, 1573
Hin1I	GRCGYC	1 cut(s)	66
Hin1II	CATG	5 cut(s)	287, 362, 629, 1466, 1625
Hin6I	GCGC	2 cut(s)	1132, 1571
HinP1I	GCGC	2 cut(s)	1132, 1571
HincII	GTYRAC	1 cut(s)	326
HindII	GTYRAC	1 cut(s)	326
HindIII	AAGCTT	1 cut(s)	843
HpaII	CCGG	1 cut(s)	1801
HphI	GGTGA	4 cut(s)	613, 710, 1390, 1772
Hpy166II	GTNNAC	4 cut(s)	56, 326, 1005, 1431
Hpy188III	TCNNGA	6 cut(s)	367, 473, 903, 923, 1019, 1832
Hpy8I	GTNNAC	4 cut(s)	56, 326, 1005, 1431
Hpy99I	CGWCG	1 cut(s)	113
HpyAV	CCTTC	4 cut(s)	89, 139, 526, 780
HpyCH4III	ACNGT	5 cut(s)	355, 560, 835, 1199, 1616
HpyCH4IV	ACGT	4 cut(s)	108, 328, 341, 1401
HpyF10VI	GCNNNNNNNGC	7 cut(s)	58, 120, 490, 626, 1148, 1274, 1772
HpyF3I	CTNAG	8 cut(s)	83, 336, 478, 852, 901, 930, 1317, 1505
HpySE526I	ACGT	4 cut(s)	108, 328, 341, 1401
Hsp92I	GRCGYC	1 cut(s)	66
Hsp92II	CATG	5 cut(s)	287, 362, 629, 1466, 1625
HspAI	GCGC	2 cut(s)	1132, 1571
Ksp22I	TGATCA	2 cut(s)	264, 1605
Kzo9I	GATC	7 cut(s)	231, 264, 287, 427, 820, 1021, 1605
LmnI	GCTCC	4 cut(s)	571, 661, 757, 1356
Lsp1109I	GCAGC	4 cut(s)	74, 530, 1151, 1504
LweI	GCATC	5 cut(s)	207, 979, 1558, 1582, 1648
MaeI	CTAG	1 cut(s)	792
MaeII	ACGT	4 cut(s)	108, 328, 341, 1401
MaeIII	GTNAC	1 cut(s)	607
MalI	GATC	7 cut(s)	233, 266, 289, 429, 822, 1023, 1607
MboI	GATC	7 cut(s)	231, 264, 287, 427, 820, 1021, 1605
MboII	GAAGA	6 cut(s)	374, 494, 729, 840, 1310, 1719
MflI	RGATCY	2 cut(s)	427, 1021
MhlI	GDGCHC	4 cut(s)	58, 374, 1018, 1361
MluCI	AATT	4 cut(s)	203, 717, 1524, 1750
MlyI	GAGTC	5 cut(s)	176, 373, 814, 915, 960
MmeI	TCCRAC	1 cut(s)	1181
Mph1103I	ATGCAT	1 cut(s)	631
MroXI	GAANNNNTTC	1 cut(s)	1767
MseI	TTAA	6 cut(s)	318, 723, 894, 911, 956, 1683
MslI	CAYNNNNRTG	2 cut(s)	630, 998
MspCI	CTTAAG	1 cut(s)	317
MspI	CCGG	1 cut(s)	1801
MspR9I	CCNGG	1 cut(s)	1802
MvnI	CGCG	1 cut(s)	52
MwoI	GCNNNNNNNGC	7 cut(s)	58, 120, 490, 626, 1148, 1274, 1772
NciI	CCSGG	1 cut(s)	1802
NdeI	CATATG	2 cut(s)	631, 673
NdeII	GATC	7 cut(s)	231, 264, 287, 427, 820, 1021, 1605
NlaIII	CATG	5 cut(s)	287, 362, 629, 1466, 1625
NlaIV	GGNNCC	4 cut(s)	398, 567, 1209, 1429
NmuCI	GTSAC	1 cut(s)	607
NsbI	TGCGCA	1 cut(s)	1572
NsiI	ATGCAT	1 cut(s)	631
NspI	RCATGY	2 cut(s)	629, 1466
PaeI	GCATGC	1 cut(s)	629
PaeR7I	CTCGAG	2 cut(s)	161, 1017
PdmI	GAANNNNTTC	1 cut(s)	1767
PfeI	GAWTC	6 cut(s)	280, 499, 785, 1103, 1307, 1439
PflFI	GACNNNGTC	1 cut(s)	107
PflMI	CCANNNNNTGG	1 cut(s)	527
PkrI	GCNGC	4 cut(s)	89, 545, 1141, 1519
PleI	GAGTC	5 cut(s)	176, 373, 813, 914, 960
PpsI	GAGTC	5 cut(s)	176, 373, 813, 914, 960
PpuMI	RGGWCCY	3 cut(s)	397, 1208, 1257
PshBI	ATTAAT	1 cut(s)	894
Psp124BI	GAGCTC	2 cut(s)	374, 1361
Psp1406I	AACGTT	1 cut(s)	1401
Psp5II	RGGWCCY	3 cut(s)	397, 1208, 1257
PspFI	CCCAGC	1 cut(s)	1151
PspN4I	GGNNCC	4 cut(s)	398, 567, 1209, 1429
PspPI	GGNCC	7 cut(s)	103, 397, 1208, 1257, 1428, 1482, 1829
PspPPI	RGGWCCY	3 cut(s)	397, 1208, 1257
PspXI	VCTCGAGB	1 cut(s)	161
PstI	CTGCAG	1 cut(s)	1522
PsuI	RGATCY	2 cut(s)	427, 1021
PsyI	GACNNNGTC	1 cut(s)	107
RsaI	GTAC	3 cut(s)	344, 1006, 1196
RsaNI	GTAC	3 cut(s)	343, 1005, 1195
RseI	CAYNNNNRTG	2 cut(s)	630, 998
SacI	GAGCTC	2 cut(s)	374, 1361
SaqAI	TTAA	6 cut(s)	318, 723, 894, 911, 956, 1683
SatI	GCNGC	4 cut(s)	88, 544, 1140, 1518
Sau3AI	GATC	7 cut(s)	231, 264, 287, 427, 820, 1021, 1605
Sau96I	GGNCC	7 cut(s)	103, 397, 1208, 1257, 1428, 1482, 1829
SchI	GAGTC	5 cut(s)	176, 373, 814, 915, 960
ScrFI	CCNGG	1 cut(s)	1802
SduI	GDGCHC	4 cut(s)	58, 374, 1018, 1361
SfaNI	GCATC	5 cut(s)	207, 979, 1558, 1582, 1648
SfcI	CTRYAG	2 cut(s)	648, 1518
Sfr274I	CTCGAG	2 cut(s)	161, 1017
SinI	GGWCC	7 cut(s)	103, 397, 1208, 1257, 1428, 1482, 1829
SlaI	CTCGAG	2 cut(s)	161, 1017
SmiMI	CAYNNNNRTG	2 cut(s)	630, 998
SmlI	CTYRAG	5 cut(s)	161, 317, 373, 880, 1017
SmoI	CTYRAG	5 cut(s)	161, 317, 373, 880, 1017
SphI	GCATGC	1 cut(s)	629
Sse9I	AATT	4 cut(s)	203, 717, 1524, 1750
SsiI	CCGC	2 cut(s)	50, 346
SspMI	CTAG	1 cut(s)	792
SstI	GAGCTC	2 cut(s)	374, 1361
StyD4I	CCNGG	1 cut(s)	1800
StyI	CCWWGG	2 cut(s)	521, 1491
TaaI	ACNGT	5 cut(s)	355, 560, 835, 1199, 1616
TaiI	ACGT	4 cut(s)	111, 331, 344, 1404
TaqI	TCGA	3 cut(s)	162, 307, 1018
TaqII	GACCGA	1 cut(s)	626
TasI	AATT	4 cut(s)	203, 717, 1524, 1750
TatI	WGTACW	1 cut(s)	1004
TfiI	GAWTC	6 cut(s)	280, 499, 785, 1103, 1307, 1439
Tru1I	TTAA	6 cut(s)	318, 723, 894, 911, 956, 1683
Tru9I	TTAA	6 cut(s)	318, 723, 894, 911, 956, 1683
TscAI	CASTG	4 cut(s)	360, 565, 1513, 1831
TseFI	GTSAC	1 cut(s)	607
TseI	GCWGC	4 cut(s)	87, 543, 1139, 1517
Tsp45I	GTSAC	1 cut(s)	607
TspDTI	ATGAA	6 cut(s)	87, 272, 506, 660, 963, 1554
TspGWI	ACGGA	1 cut(s)	375
TspRI	CASTG	4 cut(s)	360, 565, 1513, 1831
Tth111I	GACNNNGTC	1 cut(s)	107
Van91I	CCANNNNNTGG	1 cut(s)	527
Vha464I	CTTAAG	1 cut(s)	317
VneI	GTGCAC	1 cut(s)	54
VpaK11BI	GGWCC	7 cut(s)	103, 397, 1208, 1257, 1428, 1482, 1829
VspI	ATTAAT	1 cut(s)	894
XapI	RAATTY	3 cut(s)	203, 717, 1750
XceI	RCATGY	2 cut(s)	629, 1466
XhoI	CTCGAG	2 cut(s)	161, 1017
XmnI	GAANNNNTTC	1 cut(s)	1767
XspI	CTAG	1 cut(s)	792
Zsp2I	ATGCAT	1 cut(s)	631

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.