Cyclic nucleotide-gated ion channel 1-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G53130 |
| fragaria_vesca | FvH4_2g31110 FvH4_7g31200 FvH4_7g31200 FvH4_7g31200 FvH4_7g31200 |
| malus_domestica | MD01G1217100.v1.1 MD01G1217300.v1.1 MD07G1286700.v1.1 |
| prunus_persica | Prupe.2G308700_v2.0.a1 Prupe.2G308700_v2.0.a1 Prupe.2G308700_v2.0.a1 |
| pyrus_communis | pycom01g22750 pycom07g26000 |
| rosa_chinensis | RchiOBHm_Chr1g0380261 RchiOBHm_Chr1g0380301 |
| rosa_laevigata | RLG00000026314 |
| rosa_multiflora | Rmu_sc0001232.1_g000031 Rmu_sc0002387.1_g000001 Rmu_sc0002387.1_g000009 Rmu_sc0003249.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00279530 |
| rosa_rugosa | Rorug01G0419600 Rorug01G0419700 |
| rosa_samantha | Rh1AG444200 Rh1AG444300 Rh1CG412900 |
| rosa_wichuraiana | Rw1G038580 Rw1G038650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 590 |
| AatII | GACGTC | 1 cut(s) | 1894 |
| AccB1I | GGYRCC | 1 cut(s) | 2065 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 843, 1985 |
| AccI | GTMKAC | 1 cut(s) | 1214 |
| AccII | CGCG | 1 cut(s) | 2053 |
| AciI | CCGC | 8 cut(s) | 65, 1259, 1279, 1315, 1798, 1819, 2053, 2105 |
| AclWI | GGATC | 4 cut(s) | 233, 305, 1395, 1676 |
| AcoI | YGGCCR | 1 cut(s) | 1956 |
| AcuI | CTGAAG | 2 cut(s) | 665, 2078 |
| AcyI | GRCGYC | 1 cut(s) | 1891 |
| AdeI | CACNNNGTG | 1 cut(s) | 124 |
| AfaI | GTAC | 9 cut(s) | 451, 668, 795, 812, 1117, 1440, 1503, 1838, 2032 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 364, 583, 608, 843, 1965, 1985 |
| AgsI | TTSAA | 9 cut(s) | 140, 260, 503, 628, 827, 919, 1010, 1745, 1774 |
| AleI | CACNNNNGTG | 1 cut(s) | 1846 |
| AluBI | AGCT | 8 cut(s) | 219, 389, 755, 1521, 1816, 1865, 1909, 1974 |
| AluI | AGCT | 8 cut(s) | 219, 389, 755, 1521, 1816, 1865, 1909, 1974 |
| Alw26I | GTCTC | 3 cut(s) | 307, 1496, 1533 |
| AlwI | GGATC | 4 cut(s) | 233, 305, 1395, 1676 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 755 |
| Ama87I | CYCGRG | 1 cut(s) | 474 |
| AoxI | GGCC | 5 cut(s) | 248, 1072, 1638, 1956, 1989 |
| ApeKI | GCWGC | 6 cut(s) | 755, 851, 1813, 1862, 1880, 2015 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1760, 1792 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1662 |
| AspLEI | GCGC | 2 cut(s) | 1308, 1410 |
| AspS9I | GGNCC | 5 cut(s) | 42, 248, 924, 1072, 1989 |
| AsuHPI | GGTGA | 2 cut(s) | 1655, 1667 |
| AsuNHI | GCTAGC | 2 cut(s) | 389, 1970 |
| AvaI | CYCGRG | 1 cut(s) | 474 |
| AvaII | GGWCC | 2 cut(s) | 42, 924 |
| BalI | TGGCCA | 1 cut(s) | 1958 |
| BanI | GGYRCC | 1 cut(s) | 2065 |
| BanII | GRGCYC | 1 cut(s) | 1678 |
| BauI | CACGAG | 1 cut(s) | 1222 |
| BbsI | GAAGAC | 1 cut(s) | 1138 |
| BbvI | GCAGC | 6 cut(s) | 742, 863, 1825, 1874, 1892, 2002 |
| BccI | CCATC | 2 cut(s) | 1419, 1715 |
| BceAI | ACGGC | 2 cut(s) | 284, 2054 |
| BcoDI | GTCTC | 3 cut(s) | 307, 1496, 1533 |
| BfaI | CTAG | 4 cut(s) | 228, 390, 1910, 1971 |
| BfmI | CTRYAG | 1 cut(s) | 856 |
| BfoI | RGCGCY | 1 cut(s) | 1411 |
| BisI | GCNGC | 8 cut(s) | 65, 756, 852, 1799, 1814, 1863, 1881, 2016 |
| BlsI | GCNGC | 8 cut(s) | 66, 757, 853, 1800, 1815, 1864, 1882, 2017 |
| BmcAI | AGTACT | 1 cut(s) | 1503 |
| Bme18I | GGWCC | 2 cut(s) | 42, 924 |
| BmeT110I | CYCGRG | 1 cut(s) | 474 |
| BmgT120I | GGNCC | 5 cut(s) | 42, 248, 924, 1072, 1989 |
| BmiI | GGNNCC | 6 cut(s) | 802, 1073, 1111, 1990, 2067, 2109 |
| BmrI | ACTGGG | 1 cut(s) | 1538 |
| BmsI | GCATC | 7 cut(s) | 496, 991, 1246, 1317, 1465, 1545, 1939 |
| BmtI | GCTAGC | 2 cut(s) | 393, 1974 |
| BmuI | ACTGGG | 1 cut(s) | 1538 |
| BpiI | GAAGAC | 1 cut(s) | 1138 |
| BpmI | CTGGAG | 1 cut(s) | 60 |
| BpuEI | CTTGAG | 2 cut(s) | 1478, 1619 |
| Bsa29I | ATCGAT | 1 cut(s) | 339 |
| BsaAI | YACGTR | 1 cut(s) | 670 |
| BsaHI | GRCGYC | 1 cut(s) | 1891 |
| BsaI | GGTCTC | 1 cut(s) | 1533 |
| BsaJI | CCNNGG | 4 cut(s) | 674, 1105, 1383, 1959 |
| BsaWI | WCCGGW | 1 cut(s) | 452 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1530, 1560, 1925, 1955 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 364, 583, 608, 843, 1965, 1985 |
| Bse118I | RCCGGY | 1 cut(s) | 1640 |
| Bse1I | ACTGG | 8 cut(s) | 442, 664, 786, 1113, 1499, 1544, 1615, 1959 |
| Bse3DI | GCAATG | 1 cut(s) | 1485 |
| BseCI | ATCGAT | 1 cut(s) | 339 |
| BseDI | CCNNGG | 4 cut(s) | 674, 1105, 1383, 1959 |
| BseGI | GGATG | 4 cut(s) | 327, 1275, 1465, 1480 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 364, 583, 608, 843, 1965, 1985 |
| BseMI | GCAATG | 1 cut(s) | 1485 |
| BseMII | CTCAG | 3 cut(s) | 60, 153, 1281 |
| BseNI | ACTGG | 8 cut(s) | 442, 664, 786, 1113, 1499, 1544, 1615, 1959 |
| BseRI | GAGGAG | 1 cut(s) | 1946 |
| BseXI | GCAGC | 6 cut(s) | 742, 863, 1825, 1874, 1892, 2002 |
| BseYI | CCCAGC | 1 cut(s) | 1964 |
| Bsh1236I | CGCG | 1 cut(s) | 2053 |
| BshFI | GGCC | 5 cut(s) | 250, 1074, 1640, 1958, 1991 |
| BshNI | GGYRCC | 1 cut(s) | 2065 |
| BshVI | ATCGAT | 1 cut(s) | 339 |
| BsiHKCI | CYCGRG | 1 cut(s) | 474 |
| BsiSI | CCGG | 3 cut(s) | 453, 723, 1641 |
| BslFI | GGGAC | 2 cut(s) | 1258, 1412 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 364, 583, 608, 843, 1965, 1985 |
| BsmAI | GTCTC | 3 cut(s) | 307, 1496, 1533 |
| BsmBI | CGTCTC | 2 cut(s) | 307, 1496 |
| BsmFI | GGGAC | 2 cut(s) | 1258, 1412 |
| BsnI | GGCC | 5 cut(s) | 250, 1074, 1640, 1958, 1991 |
| Bso31I | GGTCTC | 1 cut(s) | 1533 |
| BsoBI | CYCGRG | 1 cut(s) | 474 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1678 |
| Bsp143I | GATC | 6 cut(s) | 238, 310, 336, 1387, 1486, 1681 |
| BspACI | CCGC | 8 cut(s) | 65, 1259, 1279, 1315, 1798, 1819, 2053, 2105 |
| BspANI | GGCC | 5 cut(s) | 250, 1074, 1640, 1958, 1991 |
| BspCNI | CTCAG | 3 cut(s) | 59, 154, 1282 |
| BspDI | ATCGAT | 1 cut(s) | 339 |
| BspFNI | CGCG | 1 cut(s) | 2053 |
| BspLI | GGNNCC | 6 cut(s) | 802, 1073, 1111, 1990, 2067, 2109 |
| BspOI | GCTAGC | 2 cut(s) | 393, 1974 |
| BspPI | GGATC | 4 cut(s) | 233, 305, 1395, 1676 |
| BspQI | GCTCTTC | 1 cut(s) | 1565 |
| BspT107I | GGYRCC | 1 cut(s) | 2065 |
| BspTNI | GGTCTC | 1 cut(s) | 1533 |
| BsrDI | GCAATG | 1 cut(s) | 1485 |
| BsrFI | RCCGGY | 1 cut(s) | 1640 |
| BsrI | ACTGG | 8 cut(s) | 442, 664, 786, 1113, 1499, 1544, 1615, 1959 |
| BssAI | RCCGGY | 1 cut(s) | 1640 |
| BssECI | CCNNGG | 4 cut(s) | 674, 1105, 1383, 1959 |
| BssMI | GATC | 6 cut(s) | 238, 310, 336, 1387, 1486, 1681 |
| BssNI | GRCGYC | 1 cut(s) | 1891 |
| BssSI | CACGAG | 1 cut(s) | 1222 |
| BssT1I | CCWWGG | 4 cut(s) | 674, 1105, 1383, 1959 |
| Bst2BI | CACGAG | 1 cut(s) | 1222 |
| Bst4CI | ACNGT | 4 cut(s) | 1061, 1266, 1326, 1723 |
| Bst6I | CTCTTC | 4 cut(s) | 481, 1353, 1565, 1923 |
| BstACI | GRCGYC | 1 cut(s) | 1891 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 755 |
| BstBAI | YACGTR | 1 cut(s) | 670 |
| BstC8I | GCNNGC | 9 cut(s) | 391, 783, 1162, 1283, 1577, 1811, 1972, 2051, 2103 |
| BstDEI | CTNAG | 6 cut(s) | 46, 162, 1085, 1290, 1391, 1733 |
| BstF5I | GGATG | 4 cut(s) | 327, 1275, 1465, 1480 |
| BstFNI | CGCG | 1 cut(s) | 2053 |
| BstH2I | RGCGCY | 1 cut(s) | 1411 |
| BstHHI | GCGC | 2 cut(s) | 1308, 1410 |
| BstKTI | GATC | 6 cut(s) | 241, 313, 339, 1390, 1489, 1684 |
| BstMAI | GTCTC | 3 cut(s) | 307, 1496, 1533 |
| BstMBI | GATC | 6 cut(s) | 238, 310, 336, 1387, 1486, 1681 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 755, 1312, 1416, 1576, 1760, 2107 |
| BstNSI | RCATGY | 3 cut(s) | 291, 781, 843 |
| BstSFI | CTRYAG | 1 cut(s) | 856 |
| BstUI | CGCG | 1 cut(s) | 2053 |
| BstV1I | GCAGC | 6 cut(s) | 742, 863, 1825, 1874, 1892, 2002 |
| BstV2I | GAAGAC | 1 cut(s) | 1138 |
| BstX2I | RGATCY | 1 cut(s) | 1387 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1228 |
| BstYI | RGATCY | 1 cut(s) | 1387 |
| Bsu15I | ATCGAT | 1 cut(s) | 339 |
| BsuRI | GGCC | 5 cut(s) | 250, 1074, 1640, 1958, 1991 |
| BsuTUI | ATCGAT | 1 cut(s) | 339 |
| BtsCI | GGATG | 4 cut(s) | 327, 1275, 1465, 1480 |
| BtsI | GCAGTG | 1 cut(s) | 1853 |
| BtsIMutI | CAGTG | 3 cut(s) | 1271, 1853, 1952 |
| Cac8I | GCNNGC | 9 cut(s) | 391, 783, 1162, 1283, 1577, 1811, 1972, 2051, 2103 |
| CaiI | CAGNNNCTG | 1 cut(s) | 755 |
| CfoI | GCGC | 2 cut(s) | 1308, 1410 |
| Cfr10I | RCCGGY | 1 cut(s) | 1640 |
| Cfr13I | GGNCC | 5 cut(s) | 42, 248, 924, 1072, 1989 |
| ClaI | ATCGAT | 1 cut(s) | 339 |
| Csp6I | GTAC | 9 cut(s) | 450, 667, 794, 811, 1116, 1439, 1502, 1837, 2031 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1865, 1900 |
| CviAII | CATG | 8 cut(s) | 180, 288, 778, 791, 840, 948, 1671, 2086 |
| CviQI | GTAC | 9 cut(s) | 450, 667, 794, 811, 1116, 1439, 1502, 1837, 2031 |
| DdeI | CTNAG | 6 cut(s) | 46, 162, 1085, 1290, 1391, 1733 |
| DpnI | GATC | 6 cut(s) | 240, 312, 338, 1389, 1488, 1683 |
| DpnII | GATC | 6 cut(s) | 238, 310, 336, 1387, 1486, 1681 |
| DraI | TTTAAA | 2 cut(s) | 939, 1758 |
| DraIII | CACNNNGTG | 1 cut(s) | 124 |
| EaeI | YGGCCR | 1 cut(s) | 1956 |
| Eam1104I | CTCTTC | 4 cut(s) | 481, 1353, 1565, 1923 |
| EarI | CTCTTC | 4 cut(s) | 481, 1353, 1565, 1923 |
| EciI | GGCGGA | 1 cut(s) | 1808 |
| Eco130I | CCWWGG | 4 cut(s) | 674, 1105, 1383, 1959 |
| Eco24I | GRGCYC | 1 cut(s) | 1678 |
| Eco31I | GGTCTC | 1 cut(s) | 1533 |
| Eco47I | GGWCC | 2 cut(s) | 42, 924 |
| Eco57I | CTGAAG | 2 cut(s) | 665, 2078 |
| Eco88I | CYCGRG | 1 cut(s) | 474 |
| EcoO109I | RGGNCCY | 2 cut(s) | 248, 1072 |
| EcoRI | GAATTC | 1 cut(s) | 231 |
| EcoT14I | CCWWGG | 4 cut(s) | 674, 1105, 1383, 1959 |
| EcoT38I | GRGCYC | 1 cut(s) | 1678 |
| ErhI | CCWWGG | 4 cut(s) | 674, 1105, 1383, 1959 |
| Esp3I | CGTCTC | 2 cut(s) | 307, 1496 |
| FaeI | CATG | 8 cut(s) | 183, 291, 781, 794, 843, 951, 1674, 2089 |
| FaqI | GGGAC | 2 cut(s) | 1258, 1412 |
| FatI | CATG | 8 cut(s) | 179, 287, 777, 790, 839, 947, 1670, 2085 |
| FauNDI | CATATG | 2 cut(s) | 875, 1120 |
| FblI | GTMKAC | 1 cut(s) | 1214 |
| Fnu4HI | GCNGC | 8 cut(s) | 65, 756, 852, 1799, 1814, 1863, 1881, 2016 |
| FokI | GGATG | 4 cut(s) | 314, 1282, 1472, 1487 |
| FriOI | GRGCYC | 1 cut(s) | 1678 |
| Fsp4HI | GCNGC | 8 cut(s) | 65, 756, 852, 1799, 1814, 1863, 1881, 2016 |
| FspBI | CTAG | 4 cut(s) | 228, 390, 1910, 1971 |
| GlaI | GCGC | 2 cut(s) | 1307, 1409 |
| GluI | GCNGC | 8 cut(s) | 65, 756, 852, 1799, 1814, 1863, 1881, 2016 |
| GsaI | CCCAGC | 1 cut(s) | 1968 |
| GsuI | CTGGAG | 1 cut(s) | 60 |
| HaeII | RGCGCY | 1 cut(s) | 1411 |
| HaeIII | GGCC | 5 cut(s) | 250, 1074, 1640, 1958, 1991 |
| HapII | CCGG | 3 cut(s) | 453, 723, 1641 |
| HhaI | GCGC | 2 cut(s) | 1308, 1410 |
| Hin1I | GRCGYC | 1 cut(s) | 1891 |
| Hin1II | CATG | 8 cut(s) | 183, 291, 781, 794, 843, 951, 1674, 2089 |
| Hin6I | GCGC | 2 cut(s) | 1306, 1408 |
| HinP1I | GCGC | 2 cut(s) | 1306, 1408 |
| HindIII | AAGCTT | 1 cut(s) | 217 |
| HinfI | GANTC | 2 cut(s) | 152, 1025 |
| HpaII | CCGG | 3 cut(s) | 453, 723, 1641 |
| HphI | GGTGA | 2 cut(s) | 1655, 1667 |
| Hpy166II | GTNNAC | 2 cut(s) | 430, 1215 |
| Hpy188I | TCNGA | 6 cut(s) | 49, 107, 163, 1190, 1627, 2097 |
| Hpy188III | TCNNGA | 9 cut(s) | 14, 35, 77, 228, 236, 474, 1532, 1679, 1711 |
| Hpy8I | GTNNAC | 2 cut(s) | 430, 1215 |
| Hpy99I | CGWCG | 1 cut(s) | 1893 |
| HpyAV | CCTTC | 6 cut(s) | 102, 266, 477, 1016, 1389, 2050 |
| HpyCH4III | ACNGT | 4 cut(s) | 1061, 1266, 1326, 1723 |
| HpyCH4IV | ACGT | 4 cut(s) | 669, 829, 1891, 2008 |
| HpyCH4V | TGCA | 9 cut(s) | 521, 563, 758, 1142, 1198, 1210, 1478, 1945, 1952 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 755, 1312, 1416, 1576, 1760, 2107 |
| HpyF3I | CTNAG | 6 cut(s) | 46, 162, 1085, 1290, 1391, 1733 |
| HpySE526I | ACGT | 4 cut(s) | 669, 829, 1891, 2008 |
| Hsp92I | GRCGYC | 1 cut(s) | 1891 |
| Hsp92II | CATG | 8 cut(s) | 183, 291, 781, 794, 843, 951, 1674, 2089 |
| HspAI | GCGC | 2 cut(s) | 1306, 1408 |
| Kzo9I | GATC | 6 cut(s) | 238, 310, 336, 1387, 1486, 1681 |
| LguI | GCTCTTC | 1 cut(s) | 1565 |
| LmnI | GCTCC | 8 cut(s) | 469, 752, 800, 884, 1290, 1821, 1979, 2107 |
| Lsp1109I | GCAGC | 6 cut(s) | 742, 863, 1825, 1874, 1892, 2002 |
| LweI | GCATC | 7 cut(s) | 496, 991, 1246, 1317, 1465, 1545, 1939 |
| MaeI | CTAG | 4 cut(s) | 228, 390, 1910, 1971 |
| MaeII | ACGT | 4 cut(s) | 669, 829, 1891, 2008 |
| MaeIII | GTNAC | 2 cut(s) | 709, 1643 |
| MalI | GATC | 6 cut(s) | 240, 312, 338, 1389, 1488, 1683 |
| MboI | GATC | 6 cut(s) | 238, 310, 336, 1387, 1486, 1681 |
| MflI | RGATCY | 1 cut(s) | 1387 |
| MhlI | GDGCHC | 1 cut(s) | 1678 |
| MlsI | TGGCCA | 1 cut(s) | 1958 |
| MluNI | TGGCCA | 1 cut(s) | 1958 |
| MlyI | GAGTC | 1 cut(s) | 1034 |
| MmeI | TCCRAC | 1 cut(s) | 129 |
| Mox20I | TGGCCA | 1 cut(s) | 1958 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1662 |
| MscI | TGGCCA | 1 cut(s) | 1958 |
| MseI | TTAA | 5 cut(s) | 171, 762, 938, 1620, 1757 |
| MslI | CAYNNNNRTG | 2 cut(s) | 332, 1846 |
| Msp20I | TGGCCA | 1 cut(s) | 1958 |
| MspA1I | CMGCKG | 2 cut(s) | 67, 2105 |
| MspI | CCGG | 3 cut(s) | 453, 723, 1641 |
| MvnI | CGCG | 1 cut(s) | 2053 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 755, 1312, 1416, 1576, 1760, 2107 |
| NdeI | CATATG | 2 cut(s) | 875, 1120 |
| NdeII | GATC | 6 cut(s) | 238, 310, 336, 1387, 1486, 1681 |
| NheI | GCTAGC | 2 cut(s) | 389, 1970 |
| NlaIII | CATG | 8 cut(s) | 183, 291, 781, 794, 843, 951, 1674, 2089 |
| NlaIV | GGNNCC | 6 cut(s) | 802, 1073, 1111, 1990, 2067, 2109 |
| NmuCI | GTSAC | 2 cut(s) | 709, 1643 |
| NspI | RCATGY | 3 cut(s) | 291, 781, 843 |
| OliI | CACNNNNGTG | 1 cut(s) | 1846 |
| PaeR7I | CTCGAG | 1 cut(s) | 474 |
| PciSI | GCTCTTC | 1 cut(s) | 1565 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1662 |
| PfeI | GAWTC | 1 cut(s) | 152 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 843, 1985 |
| PkrI | GCNGC | 8 cut(s) | 66, 757, 853, 1800, 1815, 1864, 1882, 2017 |
| PleI | GAGTC | 1 cut(s) | 1033 |
| PpsI | GAGTC | 1 cut(s) | 1033 |
| Ppu21I | YACGTR | 1 cut(s) | 670 |
| PsiI | TTATAA | 1 cut(s) | 590 |
| PspFI | CCCAGC | 1 cut(s) | 1964 |
| PspN4I | GGNNCC | 6 cut(s) | 802, 1073, 1111, 1990, 2067, 2109 |
| PspPI | GGNCC | 5 cut(s) | 42, 248, 924, 1072, 1989 |
| PstNI | CAGNNNCTG | 1 cut(s) | 755 |
| PsuI | RGATCY | 1 cut(s) | 1387 |
| RsaI | GTAC | 9 cut(s) | 451, 668, 795, 812, 1117, 1440, 1503, 1838, 2032 |
| RsaNI | GTAC | 9 cut(s) | 450, 667, 794, 811, 1116, 1439, 1502, 1837, 2031 |
| RseI | CAYNNNNRTG | 2 cut(s) | 332, 1846 |
| SapI | GCTCTTC | 1 cut(s) | 1565 |
| SaqAI | TTAA | 5 cut(s) | 171, 762, 938, 1620, 1757 |
| SatI | GCNGC | 8 cut(s) | 65, 756, 852, 1799, 1814, 1863, 1881, 2016 |
| Sau3AI | GATC | 6 cut(s) | 238, 310, 336, 1387, 1486, 1681 |
| Sau96I | GGNCC | 5 cut(s) | 42, 248, 924, 1072, 1989 |
| ScaI | AGTACT | 1 cut(s) | 1503 |
| SchI | GAGTC | 1 cut(s) | 1034 |
| SduI | GDGCHC | 1 cut(s) | 1678 |
| SfaNI | GCATC | 7 cut(s) | 496, 991, 1246, 1317, 1465, 1545, 1939 |
| SfcI | CTRYAG | 1 cut(s) | 856 |
| Sfr274I | CTCGAG | 1 cut(s) | 474 |
| SinI | GGWCC | 2 cut(s) | 42, 924 |
| SlaI | CTCGAG | 1 cut(s) | 474 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 332, 1846 |
| SmlI | CTYRAG | 3 cut(s) | 474, 1493, 1634 |
| SmoI | CTYRAG | 3 cut(s) | 474, 1493, 1634 |
| SsiI | CCGC | 8 cut(s) | 65, 1259, 1279, 1315, 1798, 1819, 2053, 2105 |
| SspI | AATATT | 1 cut(s) | 993 |
| SspMI | CTAG | 4 cut(s) | 228, 390, 1910, 1971 |
| StyI | CCWWGG | 4 cut(s) | 674, 1105, 1383, 1959 |
| TaaI | ACNGT | 4 cut(s) | 1061, 1266, 1326, 1723 |
| TaiI | ACGT | 4 cut(s) | 672, 832, 1894, 2011 |
| TaqI | TCGA | 3 cut(s) | 339, 475, 1712 |
| TaqII | GACCGA | 1 cut(s) | 749 |
| TatI | WGTACW | 4 cut(s) | 793, 1115, 1501, 1836 |
| TauI | GCSGC | 2 cut(s) | 67, 1801 |
| TfiI | GAWTC | 1 cut(s) | 152 |
| Tru1I | TTAA | 5 cut(s) | 171, 762, 938, 1620, 1757 |
| Tru9I | TTAA | 5 cut(s) | 171, 762, 938, 1620, 1757 |
| TscAI | CASTG | 3 cut(s) | 1271, 1853, 1959 |
| TseFI | GTSAC | 2 cut(s) | 709, 1643 |
| TseI | GCWGC | 6 cut(s) | 755, 851, 1813, 1862, 1880, 2015 |
| Tsp45I | GTSAC | 2 cut(s) | 709, 1643 |
| TspGWI | ACGGA | 1 cut(s) | 216 |
| TspRI | CASTG | 3 cut(s) | 1271, 1853, 1959 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 843, 1985 |
| VpaK11BI | GGWCC | 2 cut(s) | 42, 924 |
| XbaI | TCTAGA | 1 cut(s) | 227 |
| XceI | RCATGY | 3 cut(s) | 291, 781, 843 |
| XhoI | CTCGAG | 1 cut(s) | 474 |
| XmiI | GTMKAC | 1 cut(s) | 1214 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1662 |
| XspI | CTAG | 4 cut(s) | 228, 390, 1910, 1971 |
| ZraI | GACGTC | 1 cut(s) | 1892 |
| ZrmI | AGTACT | 1 cut(s) | 1503 |