Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0001642

Physical Location & Seq

Genomic Coordinates Forward (+)

3373314 .. 3381089

Gene Structure 7776 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1044000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1401 bp

ATGAACTGCTGCGGAGAGGGCCTCGCGGCTCCGGCGACGTCAGGGGCGGCCGTATCGCCGCTCGAGTGGAAGTTTTCGCAGGTCTTCGGAGAAAGGACCGCCGGCGAAGAAGTTGAGGAAGTTGATGTAATATCCGCTATTGAATTTGATAGAACGGGGGACCACCTTGCCGCTGGAGATCGTGGAGGCCGGGTGGTTTTATTTGAAAGAACTGATATAAAGGATCATGGTGGACACCGGAGAGATCTGGAGAGGATGGATTATTCAATCAGTGGGCATCCTGAGTTCCGCTATAAAACTGAATTCCAAAGTCATGAACCCAAGTTAGATTATTATAAGAACTTGGAAATTGTGGAAACAATCAACAAGATCAGATGGTGTCAAACAGCTAACGGTGCACTGTTTCTCCTCTCCACTAGTAGCAAAACCATCAAATACTGGAAGGAGATCAAGATGTGGACGAGCCATGTGGCTAGATGTCGAAGACTCTATGACAAAGCTCATGACTATCATATTAATTCGATTTCAAATAACAGCGGTGGTGAAATTTTTTTATCAGCTGATGACCTTCGAATTAATCTTTGGAACCTAGAGATTAGCAATCAAAGTTTTAATATTGTTGACATGAAGCCGGTAAACATGGAGGATCCAACTGAGGCGATAACATCCGCAGAATTTCACCCTACTCATTGTAACATGTTGGCGTACAGTAGCACAAACGGCTCAATTCGTCTTATCGATCTGCGGCAGTCAGCTTTATGTGACACTCATTGCAAATTGTTTGAAGAACAAGAAGTGCCCGGCTCAAGATCTTTTTTCACTGAATTACTAGCATCAATTTCAGATATTAAGTTTGCTCAGAACGGAAGACATATACTAAGTCGGGATTACATGACTCTTAAGTTATGGGACATCAACATGGATTCTGGCCCAGTTGCCACTTTCCAGGTTCATGAACATCTAAGACCAAAGCTCTGTGATTTATACGAAAATGATTCTATCTTCGATAAGTTTGAGTGCTGTCTAAGTGGAGATGGACACCGAGTGGCAACAGGTTCTTACAGCAATCTGTTTCGAGTGTTTGGTTGTTCTGAAGGGAGCACAGAAGCAACAACATTGGAGGCCAGCAAAAACCCCCTGAGGAGACAAGTTCAAACGCCTGCAAGGCCTTCTAGATCTTTGGGCAACCTTCGTCGTGTTCTCAGGCGAGGTATGTGCTTCCATTGTAACATAAAAGGTGCGGATAACTCTGGAGCTGATCCGGATAACTCTGGAGCTGATGCAAACGGAAATTCTTTTGACTTCACAACAAAGTTGCTACATCTTGCATGGCACCCTTCTGAGGATTTAATAGCCTGTGCTGCTTCAGACACCCTATACATGTATTATGCGTCAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000159 GO:0000278 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008287 GO:0009987 GO:0010921 GO:0016311 GO:0019208 GO:0019220 GO:0019222 GO:0019538 GO:0019888 GO:0030234 GO:0031323 GO:0031399 GO:0032268 GO:0032502 GO:0032991 GO:0035303 GO:0035304 GO:0036211 GO:0043170 GO:0043412 GO:0043666 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051174 GO:0051246 GO:0051336 GO:0060255 GO:0065007 GO:0065009 GO:0070262 GO:0071704 GO:0080090 GO:0098772 GO:1901564 GO:1902494 GO:1903293

KEGG Pathways

Metabolic & Signaling

ko03015 ko04071 ko04111 ko04151 ko04152 ko04261 ko04390 ko04391 ko04530 ko04728 ko05142 ko05160 ko05165 map03015 map04071 map04111 map04151 map04152 map04261 map04390 map04391 map04530 map04728 map05142 map05160 map05165

Pfam Domains

Protein Families

WD40

Protein Analysis

467

Amino Acids

52.49

Weight (kDa)

5.78

Isoelectric Point (pI)

47.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_Prp19	PF24814	120 - 306	1.4e-09	Prp19 WD40 domain
Beta-prop_WDR5	PF25175	120 - 319	6.4e-08	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17720 AT1G17720 AT1G51690 AT1G51690 AT1G51690 AT1G51690 AT1G51690
fragaria_vesca	FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_6g33020 FvH4_6g33020 FvH4_6g33020 FvH4_6g33020
malus_domestica	MD08G1043800.v1.1 MD08G1043900.v1.1 MD08G1044000.v1.1 MD09G1195400.v1.1 MD15G1061300.v1.1 MD17G1176000.v1.1
prunus_persica	Prupe.1G414000_v2.0.a1 Prupe.1G414000_v2.0.a1 Prupe.3G052100_v2.0.a1 Prupe.3G052100_v2.0.a1
pyrus_communis	pycom08g03540 pycom15g05740 pycom17g18330
rosa_chinensis	RchiOBHm_Chr2g0142561 RchiOBHm_Chr6g0310651
rosa_laevigata	RLG00000010469 RLG00000019967
rosa_multiflora	Rmu_co8494963.1_g000001 Rmu_sc0000482.1_g000004 Rmu_sc0007390.1_g000003
rosa_roxburghii	Rroxscaffold_2G00102520 Rroxscaffold_7G00158380
rosa_rugosa	Rorug02G0373900 Rorug02G0374000 Rorug06G0381900 Rorug06G0381900 Rorug06G0381900
rosa_samantha	Rh2BG435300 Rh2DG445300 Rh6BG505400
rosa_wichuraiana	Rw2G034890 Rw6G043120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	336
AatII	GACGTC	1 cut(s)	41
Acc36I	ACCTGC	1 cut(s)	70
AccB1I	GGYRCC	1 cut(s)	1332
AccBSI	CCGCTC	1 cut(s)	61
AccII	CGCG	1 cut(s)	26
AccIII	TCCGGA	1 cut(s)	1261
AclWI	GGATC	4 cut(s)	231, 641, 654, 1253
AcoI	YGGCCR	1 cut(s)	48
AcsI	RAATTY	5 cut(s)	143, 302, 546, 674, 1291
AcuI	CTGAAG	2 cut(s)	1113, 1350
AcyI	GRCGYC	1 cut(s)	38
AdeI	CACNNNGTG	1 cut(s)	1045
AfaI	GTAC	1 cut(s)	707
AfiI	CCNNNNNNNGG	1 cut(s)	1342
AflII	CTTAAG	1 cut(s)	899
AflIII	ACRYGT	2 cut(s)	696, 1380
AgsI	TTSAA	6 cut(s)	143, 206, 267, 528, 785, 1154
AhlI	ACTAGT	1 cut(s)	416
AjnI	CCWGG	1 cut(s)	945
AjuI	GAANNNNNNNTTGG	2 cut(s)	565, 597
AluBI	AGCT	7 cut(s)	389, 500, 560, 755, 973, 1256, 1277
AluI	AGCT	7 cut(s)	389, 500, 560, 755, 973, 1256, 1277
Alw21I	GWGCWC	2 cut(s)	400, 1103
Alw26I	GTCTC	1 cut(s)	1138
Alw44I	GTGCAC	1 cut(s)	396
AlwI	GGATC	4 cut(s)	231, 641, 654, 1253
Ama87I	CYCGRG	1 cut(s)	62
Aor13HI	TCCGGA	1 cut(s)	1261
AoxI	GGCC	6 cut(s)	19, 48, 187, 928, 1122, 1166
ApaLI	GTGCAC	1 cut(s)	396
ApeKI	GCWGC	2 cut(s)	9, 1361
ApoI	RAATTY	5 cut(s)	143, 302, 546, 674, 1291
AseI	ATTAAT	2 cut(s)	516, 576
AspS9I	GGNCC	4 cut(s)	19, 96, 160, 929
AsuC2I	CCSGG	2 cut(s)	191, 801
AsuHPI	GGTGA	2 cut(s)	554, 671
AsuII	TTCGAA	1 cut(s)	571
AvaI	CYCGRG	1 cut(s)	62
AvaII	GGWCC	2 cut(s)	96, 160
AxyI	CCTNAGG	1 cut(s)	1139
BaeGI	GKGCMC	2 cut(s)	400, 801
BamHI	GGATCC	1 cut(s)	646
BanI	GGYRCC	1 cut(s)	1332
BbsI	GAAGAC	3 cut(s)	76, 490, 874
Bbv12I	GWGCWC	2 cut(s)	400, 1103
BbvI	GCAGC	1 cut(s)	1348
BccI	CCATC	4 cut(s)	250, 369, 437, 1028
BceAI	ACGGC	2 cut(s)	35, 736
BcgI	CGANNNNNNTGC	2 cut(s)	1197, 1231
BciT130I	CCWGG	1 cut(s)	947
BcnI	CCSGG	2 cut(s)	191, 801
BcoDI	GTCTC	1 cut(s)	1138
BcuI	ACTAGT	1 cut(s)	416
BfaI	CTAG	5 cut(s)	417, 474, 590, 830, 1173
BfrI	CTTAAG	1 cut(s)	899
BfuAI	ACCTGC	1 cut(s)	70
BglI	GCCNNNNNGGC	1 cut(s)	1165
BglII	AGATCT	3 cut(s)	244, 809, 1175
BisI	GCNGC	7 cut(s)	10, 27, 48, 59, 171, 746, 1362
BlsI	GCNGC	7 cut(s)	11, 28, 49, 60, 172, 747, 1363
Bme1390I	CCNGG	3 cut(s)	191, 801, 947
Bme18I	GGWCC	2 cut(s)	96, 160
BmeT110I	CYCGRG	1 cut(s)	62
BmgT120I	GGNCC	4 cut(s)	19, 96, 160, 929
BmiI	GGNNCC	5 cut(s)	30, 161, 587, 648, 1334
BmrFI	CCNGG	3 cut(s)	191, 801, 947
BmrI	ACTGGG	1 cut(s)	926
BmsI	GCATC	3 cut(s)	286, 842, 1270
BmuI	ACTGGG	1 cut(s)	926
BpiI	GAAGAC	3 cut(s)	76, 490, 874
BplI	GAGNNNNNCTC	1 cut(s)	38
BpmI	CTGGAG	4 cut(s)	195, 269, 1272, 1293
Bpu14I	TTCGAA	1 cut(s)	571
BpuEI	CTTGAG	1 cut(s)	790
BpuMI	CCSGG	2 cut(s)	191, 801
Bsa29I	ATCGAT	1 cut(s)	738
BsaHI	GRCGYC	1 cut(s)	38
BsaWI	WCCGGW	2 cut(s)	237, 1261
BsaXI	ACNNNNNCTCC	4 cut(s)	177, 207, 390, 420
Bsc4I	CCNNNNNNNGG	1 cut(s)	1342
Bse118I	RCCGGY	2 cut(s)	101, 631
Bse1I	ACTGG	2 cut(s)	443, 932
Bse21I	CCTNAGG	1 cut(s)	1139
Bse3DI	GCAATG	1 cut(s)	769
BseAI	TCCGGA	1 cut(s)	1261
BseBI	CCWGG	1 cut(s)	947
BseCI	ATCGAT	1 cut(s)	738
BseGI	GGATG	3 cut(s)	261, 277, 665
BseLI	CCNNNNNNNGG	1 cut(s)	1342
BseMI	GCAATG	1 cut(s)	769
BseMII	CTCAG	6 cut(s)	273, 645, 872, 1130, 1216, 1332
BseNI	ACTGG	2 cut(s)	443, 932
BseRI	GAGGAG	2 cut(s)	398, 1156
BseSI	GKGCMC	2 cut(s)	400, 801
BseX3I	CGGCCG	1 cut(s)	48
BseXI	GCAGC	1 cut(s)	1348
Bsh1236I	CGCG	1 cut(s)	26
Bsh1285I	CGRYCG	1 cut(s)	51
BshFI	GGCC	6 cut(s)	21, 50, 189, 930, 1124, 1168
BshNI	GGYRCC	1 cut(s)	1332
BshVI	ATCGAT	1 cut(s)	738
BsiEI	CGRYCG	1 cut(s)	51
BsiHKAI	GWGCWC	2 cut(s)	400, 1103
BsiHKCI	CYCGRG	1 cut(s)	62
BsiSI	CCGG	7 cut(s)	32, 102, 190, 238, 632, 801, 1262
BslFI	GGGAC	2 cut(s)	173, 923
BslI	CCNNNNNNNGG	1 cut(s)	1342
BsmAI	GTCTC	1 cut(s)	1138
BsmFI	GGGAC	2 cut(s)	173, 923
BsnI	GGCC	6 cut(s)	21, 50, 189, 930, 1124, 1168
BsoBI	CYCGRG	1 cut(s)	62
Bsp119I	TTCGAA	1 cut(s)	571
Bsp1286I	GDGCHC	3 cut(s)	400, 801, 1103
Bsp13I	TCCGGA	1 cut(s)	1261
BspANI	GGCC	6 cut(s)	21, 50, 189, 930, 1124, 1168
BspCNI	CTCAG	6 cut(s)	274, 646, 871, 1131, 1215, 1333
BspDI	ATCGAT	1 cut(s)	738
BspEI	TCCGGA	1 cut(s)	1261
BspFNI	CGCG	1 cut(s)	26
BspHI	TCATGA	3 cut(s)	313, 502, 952
BspLI	GGNNCC	5 cut(s)	30, 161, 587, 648, 1334
BspMI	ACCTGC	1 cut(s)	70
BspPI	GGATC	4 cut(s)	231, 641, 654, 1253
BspT104I	TTCGAA	1 cut(s)	571
BspT107I	GGYRCC	1 cut(s)	1332
BspTI	CTTAAG	1 cut(s)	899
BsrBI	CCGCTC	1 cut(s)	61
BsrDI	GCAATG	1 cut(s)	769
BsrFI	RCCGGY	2 cut(s)	101, 631
BsrI	ACTGG	2 cut(s)	443, 932
BssAI	RCCGGY	2 cut(s)	101, 631
BssNI	GRCGYC	1 cut(s)	38
Bst2UI	CCWGG	1 cut(s)	947
Bst4CI	ACNGT	3 cut(s)	395, 402, 710
BstACI	GRCGYC	1 cut(s)	38
BstAFI	CTTAAG	1 cut(s)	899
BstBI	TTCGAA	1 cut(s)	571
BstC8I	GCNNGC	3 cut(s)	103, 1126, 1161
BstDEI	CTNAG	9 cut(s)	282, 654, 858, 878, 962, 1025, 1139, 1202, 1341
BstF5I	GGATG	3 cut(s)	261, 277, 665
BstFNI	CGCG	1 cut(s)	26
BstMAI	GTCTC	1 cut(s)	1138
BstMCI	CGRYCG	1 cut(s)	51
BstMWI	GCNNNNNNNGC	6 cut(s)	18, 32, 395, 720, 1165, 1361
BstNI	CCWGG	1 cut(s)	947
BstNSI	RCATGY	2 cut(s)	700, 1384
BstSCI	CCNGG	3 cut(s)	189, 799, 945
BstSLI	GKGCMC	2 cut(s)	400, 801
BstUI	CGCG	1 cut(s)	26
BstV1I	GCAGC	1 cut(s)	1348
BstV2I	GAAGAC	3 cut(s)	76, 490, 874
BstX2I	RGATCY	4 cut(s)	244, 646, 809, 1175
BstYI	RGATCY	4 cut(s)	244, 646, 809, 1175
BstZI	CGGCCG	1 cut(s)	48
Bsu15I	ATCGAT	1 cut(s)	738
Bsu36I	CCTNAGG	1 cut(s)	1139
BsuRI	GGCC	6 cut(s)	21, 50, 189, 930, 1124, 1168
BsuTUI	ATCGAT	1 cut(s)	738
BtsCI	GGATG	3 cut(s)	261, 277, 665
BtsIMutI	CAGTG	3 cut(s)	277, 398, 819
BveI	ACCTGC	1 cut(s)	70
Cac8I	GCNNGC	3 cut(s)	103, 1126, 1161
CciI	TCATGA	3 cut(s)	313, 502, 952
Cfr10I	RCCGGY	2 cut(s)	101, 631
Cfr13I	GGNCC	4 cut(s)	19, 96, 160, 929
ClaI	ATCGAT	1 cut(s)	738
CseI	GACGC	1 cut(s)	1380
Csp6I	GTAC	1 cut(s)	706
CviQI	GTAC	1 cut(s)	706
DdeI	CTNAG	9 cut(s)	282, 654, 858, 878, 962, 1025, 1139, 1202, 1341
DraIII	CACNNNGTG	1 cut(s)	1045
EaeI	YGGCCR	1 cut(s)	48
EagI	CGGCCG	1 cut(s)	48
EclXI	CGGCCG	1 cut(s)	48
Eco147I	AGGCCT	1 cut(s)	1168
Eco47I	GGWCC	2 cut(s)	96, 160
Eco52I	CGGCCG	1 cut(s)	48
Eco57I	CTGAAG	2 cut(s)	1113, 1350
Eco81I	CCTNAGG	1 cut(s)	1139
Eco88I	CYCGRG	1 cut(s)	62
EcoO109I	RGGNCCY	1 cut(s)	19
EcoRI	GAATTC	1 cut(s)	302
EcoRII	CCWGG	1 cut(s)	945
FaqI	GGGAC	2 cut(s)	173, 923
Fnu4HI	GCNGC	7 cut(s)	10, 27, 48, 59, 171, 746, 1362
FokI	GGATG	3 cut(s)	264, 268, 652
Fsp4HI	GCNGC	7 cut(s)	10, 27, 48, 59, 171, 746, 1362
FspBI	CTAG	5 cut(s)	417, 474, 590, 830, 1173
GluI	GCNGC	7 cut(s)	10, 27, 48, 59, 171, 746, 1362
GsuI	CTGGAG	4 cut(s)	195, 269, 1272, 1293
HaeIII	GGCC	6 cut(s)	21, 50, 189, 930, 1124, 1168
HapII	CCGG	7 cut(s)	32, 102, 190, 238, 632, 801, 1262
HgaI	GACGC	1 cut(s)	1380
Hin1I	GRCGYC	1 cut(s)	38
HincII	GTYRAC	1 cut(s)	622
HindII	GTYRAC	1 cut(s)	622
HinfI	GANTC	4 cut(s)	486, 895, 923, 995
HpaII	CCGG	7 cut(s)	32, 102, 190, 238, 632, 801, 1262
HphI	GGTGA	2 cut(s)	554, 671
Hpy166II	GTNNAC	5 cut(s)	233, 398, 459, 622, 637
Hpy188I	TCNGA	7 cut(s)	89, 374, 844, 861, 1093, 1342, 1369
Hpy8I	GTNNAC	5 cut(s)	233, 398, 459, 622, 637
Hpy99I	CGWCG	2 cut(s)	40, 1197
HpyAV	CCTTC	6 cut(s)	436, 578, 1088, 1179, 1199, 1347
HpyCH4III	ACNGT	3 cut(s)	395, 402, 710
HpyCH4IV	ACGT	1 cut(s)	38
HpyCH4V	TGCA	5 cut(s)	398, 774, 1163, 1283, 1328
HpyF10VI	GCNNNNNNNGC	6 cut(s)	18, 32, 395, 720, 1165, 1361
HpyF3I	CTNAG	9 cut(s)	282, 654, 858, 878, 962, 1025, 1139, 1202, 1341
HpySE526I	ACGT	1 cut(s)	38
Hsp92I	GRCGYC	1 cut(s)	38
Kpn2I	TCCGGA	1 cut(s)	1261
KroI	GCCGGC	1 cut(s)	101
KroNI	GCCGGC	1 cut(s)	103
LmnI	GCTCC	4 cut(s)	34, 1098, 1253, 1274
Lsp1109I	GCAGC	1 cut(s)	1348
LweI	GCATC	3 cut(s)	286, 842, 1270
MaeI	CTAG	5 cut(s)	417, 474, 590, 830, 1173
MaeII	ACGT	1 cut(s)	38
MaeIII	GTNAC	3 cut(s)	692, 761, 1226
MbiI	CCGCTC	1 cut(s)	61
MboII	GAAGA	6 cut(s)	76, 119, 495, 797, 879, 994
MflI	RGATCY	4 cut(s)	244, 646, 809, 1175
MhlI	GDGCHC	3 cut(s)	400, 801, 1103
MlyI	GAGTC	2 cut(s)	480, 889
MmeI	TCCRAC	1 cut(s)	674
MreI	CGCCGGCG	1 cut(s)	101
MroI	TCCGGA	1 cut(s)	1261
MroNI	GCCGGC	1 cut(s)	101
MseI	TTAA	6 cut(s)	516, 576, 612, 849, 900, 1349
MslI	CAYNNNNRTG	1 cut(s)	917
MspA1I	CMGCKG	3 cut(s)	173, 537, 560
MspCI	CTTAAG	1 cut(s)	899
MspI	CCGG	7 cut(s)	32, 102, 190, 238, 632, 801, 1262
MspR9I	CCNGG	3 cut(s)	191, 801, 947
MvaI	CCWGG	1 cut(s)	947
MvnI	CGCG	1 cut(s)	26
MwoI	GCNNNNNNNGC	6 cut(s)	18, 32, 395, 720, 1165, 1361
NaeI	GCCGGC	1 cut(s)	103
NciI	CCSGG	2 cut(s)	191, 801
NgoMIV	GCCGGC	1 cut(s)	101
NlaIV	GGNNCC	5 cut(s)	30, 161, 587, 648, 1334
NmuCI	GTSAC	1 cut(s)	761
NspI	RCATGY	2 cut(s)	700, 1384
NspV	TTCGAA	1 cut(s)	571
PaeR7I	CTCGAG	1 cut(s)	62
PagI	TCATGA	3 cut(s)	313, 502, 952
PceI	AGGCCT	1 cut(s)	1168
PciI	ACATGT	2 cut(s)	696, 1380
PdiI	GCCGGC	1 cut(s)	103
PfeI	GAWTC	2 cut(s)	923, 995
PkrI	GCNGC	7 cut(s)	11, 28, 49, 60, 172, 747, 1363
PleI	GAGTC	2 cut(s)	480, 889
PpsI	GAGTC	2 cut(s)	480, 889
PscI	ACATGT	2 cut(s)	696, 1380
PshBI	ATTAAT	2 cut(s)	516, 576
PsiI	TTATAA	1 cut(s)	336
Psp6I	CCWGG	1 cut(s)	945
PspGI	CCWGG	1 cut(s)	945
PspN4I	GGNNCC	5 cut(s)	30, 161, 587, 648, 1334
PspPI	GGNCC	4 cut(s)	19, 96, 160, 929
PspXI	VCTCGAGB	1 cut(s)	62
PsuI	RGATCY	4 cut(s)	244, 646, 809, 1175
PvuII	CAGCTG	1 cut(s)	560
RsaI	GTAC	1 cut(s)	707
RsaNI	GTAC	1 cut(s)	706
RseI	CAYNNNNRTG	1 cut(s)	917
SaqAI	TTAA	6 cut(s)	516, 576, 612, 849, 900, 1349
SatI	GCNGC	7 cut(s)	10, 27, 48, 59, 171, 746, 1362
Sau96I	GGNCC	4 cut(s)	19, 96, 160, 929
SchI	GAGTC	2 cut(s)	480, 889
ScrFI	CCNGG	3 cut(s)	191, 801, 947
SduI	GDGCHC	3 cut(s)	400, 801, 1103
SfaNI	GCATC	3 cut(s)	286, 842, 1270
Sfr274I	CTCGAG	1 cut(s)	62
SfuI	TTCGAA	1 cut(s)	571
SgrAI	CRCCGGYG	1 cut(s)	101
SinI	GGWCC	2 cut(s)	96, 160
SlaI	CTCGAG	1 cut(s)	62
SmiMI	CAYNNNNRTG	1 cut(s)	917
SmlI	CTYRAG	3 cut(s)	62, 805, 899
SmoI	CTYRAG	3 cut(s)	62, 805, 899
SpeI	ACTAGT	1 cut(s)	416
SseBI	AGGCCT	1 cut(s)	1168
SspI	AATATT	1 cut(s)	616
SspMI	CTAG	5 cut(s)	417, 474, 590, 830, 1173
StuI	AGGCCT	1 cut(s)	1168
StyD4I	CCNGG	3 cut(s)	189, 799, 945
TaaI	ACNGT	3 cut(s)	395, 402, 710
TaiI	ACGT	1 cut(s)	41
TaqI	TCGA	7 cut(s)	63, 481, 521, 571, 738, 1005, 1075
TauI	GCSGC	5 cut(s)	29, 50, 61, 173, 748
TfiI	GAWTC	2 cut(s)	923, 995
Tru1I	TTAA	6 cut(s)	516, 576, 612, 849, 900, 1349
Tru9I	TTAA	6 cut(s)	516, 576, 612, 849, 900, 1349
TscAI	CASTG	3 cut(s)	277, 405, 826
TseFI	GTSAC	1 cut(s)	761
TseI	GCWGC	2 cut(s)	9, 1361
Tsp45I	GTSAC	1 cut(s)	761
TspDTI	ATGAA	5 cut(s)	17, 330, 641, 941, 969
TspGWI	ACGGA	2 cut(s)	879, 1302
TspRI	CASTG	3 cut(s)	277, 405, 826
Vha464I	CTTAAG	1 cut(s)	899
VneI	GTGCAC	1 cut(s)	396
VpaK11BI	GGWCC	2 cut(s)	96, 160
VspI	ATTAAT	2 cut(s)	516, 576
XapI	RAATTY	5 cut(s)	143, 302, 546, 674, 1291
XbaI	TCTAGA	1 cut(s)	1172
XceI	RCATGY	2 cut(s)	700, 1384
XcmI	CCANNNNNNNNNTGG	1 cut(s)	170
XhoI	CTCGAG	1 cut(s)	62
XspI	CTAG	5 cut(s)	417, 474, 590, 830, 1173
ZraI	GACGTC	1 cut(s)	39

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.