Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0001642

Physical Location & Seq

Genomic Coordinates Forward (+)

17721840 .. 17729287

Gene Structure 7448 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1195400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGAACGGTGGCGATGAGGTCGTCGCAGCAGCTCCAGGGGGTCCTCCAACGCCTCTGGAGTGGAAATTCTCTCAGGTCTTCGGCGAGCGTACAGTCGGTGAAGAAGTTCAGGAAGTTGACATTATTTCTGCTATTGAATTTGATAAAAGTGGCGACCATCTTGCTACTGGTGACCGTGGGGGCCGGGTGGTTCTCTTTGAGAGAACAGATTTGAAAGATCATGGTGGCTCCAGAAGGGATTTGGAGAGGATGGATTATCCAACTAGTAGGCATCCTGAGTTCCGTTACAAAACAGAGTTTCAGAGCCATGAACCTGAGTTCGACTATCTGAAGAGTTTGGAAATAGAGGAGAAAATAAACAAAATCAGATGGTGCCAAACAGCCAATGGTGCTTTGTTTCTTCTATCTACTAATGATAAAACGATTAAATTTTGGAAGGTCCAAGAAAAGAAGGTCAAGAAAATTTCAGAAATGAATGTGGATCCTTCAAAAGCTGTAGGAAATGGCAGTTTTGCTAGTTCAAGTAATTTGAGTAGCCCTAAAACGTATCTTGCAAATGGAGGATGCCCAGACAGATCATTCAGTTGTCTGAGCAATGACATTTCATTTCCACCAGGAGGCATTCCCTTGTTACGATTGCCACAGGTGGTAACTAGCCATGAGACTAGCCTAGTCGCTAGATGTCGAAGAGTGTATGCCCATGCTCATGATTATCATATCAATTCAATTTCAAACAACAGTGATGGTGAAACTTTTATTTCGGCTGATGATCTGCGAATAAATCTTTGGAACTTGGAAATTAGCAATCAAAGTTTCAATATTGTTGATGTGAAGCCTGCAAACATGGAAGATTTAACTGAGGTGATAACATCAGCAGAGTTCCACCCTACCCATTGTAATACTTTAGCCTACAGCAGTTCCAAAGGCTCCATTCGACTCATTGATTTGCGCCAATCCGCTTTGTGTGATTCTCATGCTAAATTATTTGAGGAACCAGAGGTGCCTGGTGCTAGATCATTTTTCACAGAGATTATTGCTTCAATATCGGATATTAAGTTTGGAAAGGAAGGAAGATATATACTTAGCCGAGATTACATGACTCTTAAGTTATGGGACATCAATATGGATTCAGGTCCGGTCCAAACCTTCCAGGTTCATGAATATTTAAGACCTAAGCTGTGTGATTTATATGAGAACGATTCTATCTTCGATAAATTTGAGTGTTGTCTGAGTGGTGATGGATCGCGGGTGGCAACTGGCTCTTACAGCAATCTATTCCGTGTATTTGGTTCTGCCACTGGTAGTACTGAGGCAACAACCTTGGAAGCCAGCAAAAATCCAATGAGGCGACAAGTTCAGACTCCTTCTAGGCCTTCCAGGTCCCTGAGCAGTAGTATAACACGAGTTGTCAGGCGTGGAGCAGAAAGCCCCGGGGTTGATGCAAATGGAAATTGTTATGATTTCACTACAAAGTTGCTGCACTTGGCATGGCATCCTAATGAGAACTCAATAGCCTGTGCTGCTGCTAACAGCTTGTACATGTACTATGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000159 GO:0000278 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008287 GO:0009987 GO:0010921 GO:0016311 GO:0019208 GO:0019220 GO:0019222 GO:0019538 GO:0019888 GO:0030234 GO:0031323 GO:0031399 GO:0032268 GO:0032502 GO:0032991 GO:0035303 GO:0035304 GO:0036211 GO:0043170 GO:0043412 GO:0043666 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051174 GO:0051246 GO:0051336 GO:0060255 GO:0065007 GO:0065009 GO:0070262 GO:0071704 GO:0080090 GO:0098772 GO:1901564 GO:1902494 GO:1903293

KEGG Pathways

Metabolic & Signaling

ko03015 ko04071 ko04111 ko04151 ko04152 ko04261 ko04390 ko04391 ko04530 ko04728 ko05142 ko05160 ko05165 map03015 map04071 map04111 map04151 map04152 map04261 map04390 map04391 map04530 map04728 map05142 map05160 map05165

Pfam Domains

Protein Families

WD40

Protein Analysis

518

Amino Acids

57.67

Weight (kDa)

5.76

Isoelectric Point (pI)

48.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17720 AT1G17720 AT1G51690 AT1G51690 AT1G51690 AT1G51690 AT1G51690
fragaria_vesca	FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_6g33020 FvH4_6g33020 FvH4_6g33020 FvH4_6g33020
malus_domestica	MD08G1043800.v1.1 MD08G1043900.v1.1 MD08G1044000.v1.1 MD09G1195400.v1.1 MD15G1061300.v1.1 MD17G1176000.v1.1
prunus_persica	Prupe.1G414000_v2.0.a1 Prupe.1G414000_v2.0.a1 Prupe.3G052100_v2.0.a1 Prupe.3G052100_v2.0.a1
pyrus_communis	pycom08g03540 pycom15g05740 pycom17g18330
rosa_chinensis	RchiOBHm_Chr2g0142561 RchiOBHm_Chr6g0310651
rosa_laevigata	RLG00000010469 RLG00000019967
rosa_multiflora	Rmu_co8494963.1_g000001 Rmu_sc0000482.1_g000004 Rmu_sc0007390.1_g000003
rosa_roxburghii	Rroxscaffold_2G00102520 Rroxscaffold_7G00158380
rosa_rugosa	Rorug02G0373900 Rorug02G0374000 Rorug06G0381900 Rorug06G0381900 Rorug06G0381900
rosa_samantha	Rh2BG435300 Rh2DG445300 Rh6BG505400
rosa_wichuraiana	Rw2G034890 Rw6G043120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	372, 1000
AccII	CGCG	1 cut(s)	1246
AciI	CCGC	2 cut(s)	957, 1246
AclWI	GGATC	3 cut(s)	476, 489, 1249
AcsI	RAATTY	5 cut(s)	65, 137, 428, 462, 1214
AcuI	CTGAAG	1 cut(s)	350
AfaI	GTAC	4 cut(s)	91, 1306, 1538, 1544
AfiI	CCNNNNNNNGG	1 cut(s)	617
AflII	CTTAAG	1 cut(s)	1103
AflIII	ACRYGT	1 cut(s)	1539
AgsI	TTSAA	8 cut(s)	137, 214, 489, 522, 726, 732, 817, 1041
AhlI	ACTAGT	1 cut(s)	263
AjnI	CCWGG	5 cut(s)	34, 613, 1003, 1149, 1376
AjuI	GAANNNNNNNTTGG	2 cut(s)	769, 801
AluBI	AGCT	4 cut(s)	32, 494, 1177, 1533
AluI	AGCT	4 cut(s)	32, 494, 1177, 1533
Alw26I	GTCTC	1 cut(s)	656
AlwI	GGATC	3 cut(s)	476, 489, 1249
Ama87I	CYCGRG	1 cut(s)	1430
AoxI	GGCC	2 cut(s)	181, 1370
ApeKI	GCWGC	5 cut(s)	26, 29, 1477, 1520, 1523
ApoI	RAATTY	5 cut(s)	65, 137, 428, 462, 1214
Asp700I	GAANNNNTTC	1 cut(s)	105
AspLEI	GCGC	1 cut(s)	951
AspS9I	GGNCC	6 cut(s)	41, 181, 439, 1133, 1138, 1380
AsuC2I	CCSGG	3 cut(s)	185, 1431, 1432
AsuHPI	GGTGA	5 cut(s)	110, 182, 758, 874, 1247
AvaI	CYCGRG	1 cut(s)	1430
AvaII	GGWCC	5 cut(s)	41, 439, 1133, 1138, 1380
BamHI	GGATCC	1 cut(s)	481
BanI	GGYRCC	2 cut(s)	372, 1000
BauI	CACGAG	1 cut(s)	1401
BbsI	GAAGAC	1 cut(s)	70
BbvI	GCAGC	5 cut(s)	38, 41, 1464, 1507, 1510
BccI	CCATC	5 cut(s)	165, 244, 363, 737, 1232
BcgI	CGANNNNNNTGC	2 cut(s)	143, 177
BciT130I	CCWGG	5 cut(s)	36, 615, 1005, 1151, 1378
BcnI	CCSGG	3 cut(s)	185, 1431, 1432
BcoDI	GTCTC	1 cut(s)	656
BcuI	ACTAGT	1 cut(s)	263
BfaI	CTAG	8 cut(s)	264, 516, 654, 666, 671, 678, 1011, 1368
BfmI	CTRYAG	2 cut(s)	495, 910
BfrI	CTTAAG	1 cut(s)	1103
BisI	GCNGC	5 cut(s)	27, 30, 1478, 1521, 1524
BlsI	GCNGC	5 cut(s)	28, 31, 1479, 1522, 1525
BmcAI	AGTACT	1 cut(s)	1306
Bme1390I	CCNGG	8 cut(s)	36, 185, 615, 1005, 1151, 1378, 1431, 1432
Bme18I	GGWCC	5 cut(s)	41, 439, 1133, 1138, 1380
BmeT110I	CYCGRG	1 cut(s)	1430
BmgT120I	GGNCC	6 cut(s)	41, 181, 439, 1133, 1138, 1380
BmiI	GGNNCC	9 cut(s)	42, 182, 229, 374, 483, 928, 993, 1002, 1382
BmrFI	CCNGG	8 cut(s)	36, 185, 615, 1005, 1151, 1378, 1431, 1432
BmsI	GCATC	4 cut(s)	280, 554, 1429, 1501
BpiI	GAAGAC	1 cut(s)	70
BpmI	CTGGAG	3 cut(s)	18, 77, 214
Bpu10I	CCTNAGC	2 cut(s)	1173, 1385
BpuMI	CCSGG	3 cut(s)	185, 1431, 1432
BsaJI	CCNNGG	6 cut(s)	35, 175, 1320, 1429, 1430, 1431
BsaWI	WCCGGW	1 cut(s)	1135
Bsc4I	CCNNNNNNNGG	1 cut(s)	617
Bse1I	ACTGG	3 cut(s)	172, 1261, 1303
Bse3DI	GCAATG	1 cut(s)	601
BseBI	CCWGG	5 cut(s)	36, 615, 1005, 1151, 1378
BseDI	CCNNGG	6 cut(s)	35, 175, 1320, 1429, 1430, 1431
BseGI	GGATG	4 cut(s)	255, 271, 569, 1492
BseLI	CCNNNNNNNGG	1 cut(s)	617
BseMI	GCAATG	1 cut(s)	601
BseMII	CTCAG	8 cut(s)	86, 267, 306, 581, 849, 1220, 1299, 1376
BseNI	ACTGG	3 cut(s)	172, 1261, 1303
BseRI	GAGGAG	1 cut(s)	362
BseXI	GCAGC	5 cut(s)	38, 41, 1464, 1507, 1510
BsgI	GTGCAG	1 cut(s)	1463
Bsh1236I	CGCG	1 cut(s)	1246
BshFI	GGCC	2 cut(s)	183, 1372
BshNI	GGYRCC	2 cut(s)	372, 1000
BsiHKCI	CYCGRG	1 cut(s)	1430
BsiSI	CCGG	3 cut(s)	184, 1136, 1431
BslFI	GGGAC	2 cut(s)	1127, 1366
BslI	CCNNNNNNNGG	1 cut(s)	617
BsmAI	GTCTC	1 cut(s)	656
BsmFI	GGGAC	2 cut(s)	1127, 1366
BsmI	GAATGC	1 cut(s)	621
BsnI	GGCC	2 cut(s)	183, 1372
BsoBI	CYCGRG	1 cut(s)	1430
Bsp1407I	TGTACA	1 cut(s)	1536
Bsp143I	GATC	6 cut(s)	217, 481, 575, 769, 1013, 1241
BspACI	CCGC	2 cut(s)	957, 1246
BspANI	GGCC	2 cut(s)	183, 1372
BspCNI	CTCAG	8 cut(s)	85, 268, 307, 582, 850, 1221, 1300, 1377
BspFNI	CGCG	1 cut(s)	1246
BspHI	TCATGA	2 cut(s)	706, 1156
BspLI	GGNNCC	9 cut(s)	42, 182, 229, 374, 483, 928, 993, 1002, 1382
BspPI	GGATC	3 cut(s)	476, 489, 1249
BspT107I	GGYRCC	2 cut(s)	372, 1000
BspTI	CTTAAG	1 cut(s)	1103
BsrDI	GCAATG	1 cut(s)	601
BsrGI	TGTACA	1 cut(s)	1536
BsrI	ACTGG	3 cut(s)	172, 1261, 1303
BssECI	CCNNGG	6 cut(s)	35, 175, 1320, 1429, 1430, 1431
BssMI	GATC	6 cut(s)	217, 481, 575, 769, 1013, 1241
BssSI	CACGAG	1 cut(s)	1401
BssT1I	CCWWGG	1 cut(s)	1320
Bst2BI	CACGAG	1 cut(s)	1401
Bst2UI	CCWGG	5 cut(s)	36, 615, 1005, 1151, 1378
Bst4CI	ACNGT	4 cut(s)	8, 94, 176, 740
Bst6I	CTCTTC	2 cut(s)	326, 682
BstAFI	CTTAAG	1 cut(s)	1103
BstAUI	TGTACA	1 cut(s)	1536
BstC8I	GCNNGC	3 cut(s)	86, 837, 1330
BstDSI	CCRYGG	1 cut(s)	175
BstEII	GGTNACC	1 cut(s)	170
BstF5I	GGATG	4 cut(s)	255, 271, 569, 1492
BstFNI	CGCG	1 cut(s)	1246
BstHHI	GCGC	1 cut(s)	951
BstKTI	GATC	6 cut(s)	220, 484, 578, 772, 1016, 1244
BstMAI	GTCTC	1 cut(s)	656
BstMBI	GATC	6 cut(s)	217, 481, 575, 769, 1013, 1241
BstMWI	GCNNNNNNNGC	3 cut(s)	389, 1266, 1520
BstNI	CCWGG	5 cut(s)	36, 615, 1005, 1151, 1378
BstNSI	RCATGY	1 cut(s)	1543
BstPI	GGTNACC	1 cut(s)	170
BstSCI	CCNGG	8 cut(s)	34, 183, 613, 1003, 1149, 1376, 1429, 1430
BstSFI	CTRYAG	2 cut(s)	495, 910
BstUI	CGCG	1 cut(s)	1246
BstV1I	GCAGC	5 cut(s)	38, 41, 1464, 1507, 1510
BstV2I	GAAGAC	1 cut(s)	70
BstX2I	RGATCY	1 cut(s)	481
BstYI	RGATCY	1 cut(s)	481
BsuRI	GGCC	2 cut(s)	183, 1372
BtgI	CCRYGG	1 cut(s)	175
BtgZI	GCGATG	1 cut(s)	27
BtsCI	GGATG	4 cut(s)	255, 271, 569, 1492
BtsIMutI	CAGTG	2 cut(s)	745, 1296
Cac8I	GCNNGC	3 cut(s)	86, 837, 1330
CciI	TCATGA	2 cut(s)	706, 1156
CfoI	GCGC	1 cut(s)	951
Cfr13I	GGNCC	6 cut(s)	41, 181, 439, 1133, 1138, 1380
Cfr9I	CCCGGG	1 cut(s)	1430
Csp6I	GTAC	4 cut(s)	90, 1305, 1537, 1543
CviQI	GTAC	4 cut(s)	90, 1305, 1537, 1543
DpnI	GATC	6 cut(s)	219, 483, 577, 771, 1015, 1243
DpnII	GATC	6 cut(s)	217, 481, 575, 769, 1013, 1241
Eam1104I	CTCTTC	2 cut(s)	326, 682
EarI	CTCTTC	2 cut(s)	326, 682
Eco130I	CCWWGG	1 cut(s)	1320
Eco147I	AGGCCT	1 cut(s)	1372
Eco47I	GGWCC	5 cut(s)	41, 439, 1133, 1138, 1380
Eco57I	CTGAAG	1 cut(s)	350
Eco88I	CYCGRG	1 cut(s)	1430
Eco91I	GGTNACC	1 cut(s)	170
EcoO109I	RGGNCCY	2 cut(s)	41, 1380
EcoO65I	GGTNACC	1 cut(s)	170
EcoRII	CCWGG	5 cut(s)	34, 613, 1003, 1149, 1376
EcoT14I	CCWWGG	1 cut(s)	1320
EcoT22I	ATGCAT	1 cut(s)	1552
ErhI	CCWWGG	1 cut(s)	1320
FaqI	GGGAC	2 cut(s)	1127, 1366
FauI	CCCGC	1 cut(s)	1239
Fnu4HI	GCNGC	5 cut(s)	27, 30, 1478, 1521, 1524
FokI	GGATG	4 cut(s)	258, 262, 576, 1479
Fsp4HI	GCNGC	5 cut(s)	27, 30, 1478, 1521, 1524
FspBI	CTAG	8 cut(s)	264, 516, 654, 666, 671, 678, 1011, 1368
GlaI	GCGC	1 cut(s)	950
GluI	GCNGC	5 cut(s)	27, 30, 1478, 1521, 1524
GsuI	CTGGAG	3 cut(s)	18, 77, 214
HaeIII	GGCC	2 cut(s)	183, 1372
HapII	CCGG	3 cut(s)	184, 1136, 1431
HhaI	GCGC	1 cut(s)	951
Hin6I	GCGC	1 cut(s)	949
HinP1I	GCGC	1 cut(s)	949
HincII	GTYRAC	1 cut(s)	118
HindII	GTYRAC	1 cut(s)	118
HinfI	GANTC	6 cut(s)	936, 968, 1099, 1127, 1199, 1360
HpaII	CCGG	3 cut(s)	184, 1136, 1431
HphI	GGTGA	5 cut(s)	110, 182, 758, 874, 1247
Hpy166II	GTNNAC	1 cut(s)	118
Hpy188I	TCNGA	8 cut(s)	303, 330, 368, 469, 591, 1048, 1230, 1359
Hpy188III	TCNNGA	7 cut(s)	56, 110, 231, 275, 457, 707, 1157
Hpy8I	GTNNAC	1 cut(s)	118
Hpy99I	CGWCG	1 cut(s)	26
HpyAV	CCTTC	8 cut(s)	228, 430, 445, 495, 1061, 1156, 1374, 1383
HpyCH4III	ACNGT	4 cut(s)	8, 94, 176, 740
HpyCH4IV	ACGT	1 cut(s)	545
HpyCH4V	TGCA	5 cut(s)	554, 839, 1442, 1480, 1550
HpyF10VI	GCNNNNNNNGC	3 cut(s)	389, 1266, 1520
HpySE526I	ACGT	1 cut(s)	545
HspAI	GCGC	1 cut(s)	949
Kzo9I	GATC	6 cut(s)	217, 481, 575, 769, 1013, 1241
LmnI	GCTCC	4 cut(s)	37, 233, 932, 1418
Lsp1109I	GCAGC	5 cut(s)	38, 41, 1464, 1507, 1510
LweI	GCATC	4 cut(s)	280, 554, 1429, 1501
MaeI	CTAG	8 cut(s)	264, 516, 654, 666, 671, 678, 1011, 1368
MaeII	ACGT	1 cut(s)	545
MaeIII	GTNAC	4 cut(s)	170, 284, 630, 649
MalI	GATC	6 cut(s)	219, 483, 577, 771, 1015, 1243
MboI	GATC	6 cut(s)	217, 481, 575, 769, 1013, 1241
MboII	GAAGA	8 cut(s)	70, 113, 343, 392, 699, 860, 1083, 1198
MflI	RGATCY	1 cut(s)	481
MlyI	GAGTC	3 cut(s)	930, 1093, 1354
MmeI	TCCRAC	2 cut(s)	71, 284
Mph1103I	ATGCAT	1 cut(s)	1552
MroXI	GAANNNNTTC	1 cut(s)	105
MseI	TTAA	5 cut(s)	426, 854, 1053, 1104, 1166
MslI	CAYNNNNRTG	3 cut(s)	705, 1121, 1497
MspCI	CTTAAG	1 cut(s)	1103
MspI	CCGG	3 cut(s)	184, 1136, 1431
MspR9I	CCNGG	8 cut(s)	36, 185, 615, 1005, 1151, 1378, 1431, 1432
Mva1269I	GAATGC	1 cut(s)	621
MvaI	CCWGG	5 cut(s)	36, 615, 1005, 1151, 1378
MvnI	CGCG	1 cut(s)	1246
MwoI	GCNNNNNNNGC	3 cut(s)	389, 1266, 1520
NciI	CCSGG	3 cut(s)	185, 1431, 1432
NdeII	GATC	6 cut(s)	217, 481, 575, 769, 1013, 1241
NlaIV	GGNNCC	9 cut(s)	42, 182, 229, 374, 483, 928, 993, 1002, 1382
NmeAIII	GCCGAG	1 cut(s)	1112
NmuCI	GTSAC	1 cut(s)	170
NsiI	ATGCAT	1 cut(s)	1552
NspI	RCATGY	1 cut(s)	1543
PagI	TCATGA	2 cut(s)	706, 1156
PceI	AGGCCT	1 cut(s)	1372
PciI	ACATGT	1 cut(s)	1539
PctI	GAATGC	1 cut(s)	621
PdmI	GAANNNNTTC	1 cut(s)	105
PfeI	GAWTC	3 cut(s)	968, 1127, 1199
PkrI	GCNGC	5 cut(s)	28, 31, 1479, 1522, 1525
PleI	GAGTC	3 cut(s)	930, 1093, 1354
PpsI	GAGTC	3 cut(s)	930, 1093, 1354
PpuMI	RGGWCCY	2 cut(s)	41, 1380
PscI	ACATGT	1 cut(s)	1539
Psp5II	RGGWCCY	2 cut(s)	41, 1380
Psp6I	CCWGG	5 cut(s)	34, 613, 1003, 1149, 1376
PspEI	GGTNACC	1 cut(s)	170
PspGI	CCWGG	5 cut(s)	34, 613, 1003, 1149, 1376
PspN4I	GGNNCC	9 cut(s)	42, 182, 229, 374, 483, 928, 993, 1002, 1382
PspPI	GGNCC	6 cut(s)	41, 181, 439, 1133, 1138, 1380
PspPPI	RGGWCCY	2 cut(s)	41, 1380
PsuI	RGATCY	1 cut(s)	481
RsaI	GTAC	4 cut(s)	91, 1306, 1538, 1544
RsaNI	GTAC	4 cut(s)	90, 1305, 1537, 1543
RseI	CAYNNNNRTG	3 cut(s)	705, 1121, 1497
SaqAI	TTAA	5 cut(s)	426, 854, 1053, 1104, 1166
SatI	GCNGC	5 cut(s)	27, 30, 1478, 1521, 1524
Sau3AI	GATC	6 cut(s)	217, 481, 575, 769, 1013, 1241
Sau96I	GGNCC	6 cut(s)	41, 181, 439, 1133, 1138, 1380
ScaI	AGTACT	1 cut(s)	1306
SchI	GAGTC	3 cut(s)	930, 1093, 1354
ScrFI	CCNGG	8 cut(s)	36, 185, 615, 1005, 1151, 1378, 1431, 1432
SfaNI	GCATC	4 cut(s)	280, 554, 1429, 1501
SfcI	CTRYAG	2 cut(s)	495, 910
SinI	GGWCC	5 cut(s)	41, 439, 1133, 1138, 1380
SmaI	CCCGGG	1 cut(s)	1432
SmiMI	CAYNNNNRTG	3 cut(s)	705, 1121, 1497
SmlI	CTYRAG	1 cut(s)	1103
SmoI	CTYRAG	1 cut(s)	1103
SpeI	ACTAGT	1 cut(s)	263
SseBI	AGGCCT	1 cut(s)	1372
SsiI	CCGC	2 cut(s)	957, 1246
SspI	AATATT	2 cut(s)	820, 1163
SspMI	CTAG	8 cut(s)	264, 516, 654, 666, 671, 678, 1011, 1368
StuI	AGGCCT	1 cut(s)	1372
StyD4I	CCNGG	8 cut(s)	34, 183, 613, 1003, 1149, 1376, 1429, 1430
StyI	CCWWGG	1 cut(s)	1320
TaaI	ACNGT	4 cut(s)	8, 94, 176, 740
TaiI	ACGT	1 cut(s)	548
TaqI	TCGA	4 cut(s)	321, 685, 934, 1209
TatI	WGTACW	3 cut(s)	1304, 1536, 1542
TfiI	GAWTC	3 cut(s)	968, 1127, 1199
Tru1I	TTAA	5 cut(s)	426, 854, 1053, 1104, 1166
Tru9I	TTAA	5 cut(s)	426, 854, 1053, 1104, 1166
TscAI	CASTG	2 cut(s)	745, 1303
TseFI	GTSAC	1 cut(s)	170
TseI	GCWGC	5 cut(s)	26, 29, 1477, 1520, 1523
Tsp45I	GTSAC	1 cut(s)	170
TspDTI	ATGAA	6 cut(s)	17, 324, 488, 594, 1145, 1173
TspGWI	ACGGA	2 cut(s)	272, 1268
TspMI	CCCGGG	1 cut(s)	1430
TspRI	CASTG	2 cut(s)	745, 1303
Vha464I	CTTAAG	1 cut(s)	1103
VpaK11BI	GGWCC	5 cut(s)	41, 439, 1133, 1138, 1380
XapI	RAATTY	5 cut(s)	65, 137, 428, 462, 1214
XceI	RCATGY	1 cut(s)	1543
XcmI	CCANNNNNNNNNTGG	3 cut(s)	164, 238, 383
XmaI	CCCGGG	1 cut(s)	1430
XmnI	GAANNNNTTC	1 cut(s)	105
XspI	CTAG	8 cut(s)	264, 516, 654, 666, 671, 678, 1011, 1368
ZrmI	AGTACT	1 cut(s)	1306
Zsp2I	ATGCAT	1 cut(s)	1552

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.