Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0001642

Physical Location & Seq

Genomic Coordinates Forward (+)

1925203 .. 1930314

Gene Structure 5112 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010469

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

ATGAACGGCGGCGGAGAGGGGCTCGCGGTTCCGGCGACGTCTGGAGCGGCGACGGCGACGGCGCCGCTGGACTGGAAGTTTTCTCAGGTTTTCGGAGAACGGACCGCCGGCGAGGAAGTTCAGGAAGTTGATATAATATCTGCTATAGAATTCGATAGAACTGGGGACCACCTTGCCACTGGAGATCGTGGAGGGAGGGTGGTGTTATTTGAAAGAACTGATGCCAAGGAGAATGGTGCACATCGGAAAGATCTGGAAAGAATGGATTATTCCATGAGCAAGCATCCTGAGTTTCGCTATAAAACTGAGTTCCAGAGTCATGAACCCGAGTTTGATTATCTGAAGAGCTTGGAAATCGAGGAAAAAATCAACAAAATTCGATGGTGTCAGACAGCTAATGGCGCACTGTTTCTTCTCTCGACTAATGACAAAACCATCAAATTCTGGAAGGTCCAAGAAAAGAAGGTAAAGAAATTGTCTGAGATGAATGTGGATCAGTCTAAATCTTCGGGGAATGGTCCAGTTGTTGACAGTACGCCAGAAATTTCCAAACCATATCTTGCAAATGGAGTATGTAAAGATAAACCCATCAGCTTTCCAAGCAATGATAGTTCAATTCCATCCGGGGGTTTCCCATCCCTGCGAATGCCTGTGGTGACCAGTCCTGAGACAAGTCTTTTGGCTAGATGTCGAAGAGTCTATGCCCATGCTCATGACTATCATATTAATTCCATTTCAAATAATAGTGATGGCGAAACTTTTATATCAGCCGATGACCTGCGAATTAATCTATGGAACTTAGAGATTAGCAGTCAAAGTTTCAATATTGTTGATGTGAAACCTACAAACATGGAGGATCTAACTGAGGTGATAACTTCAGCAGAATTCCACCCTACTCACTGTAACACATTGGCATACAGTAGCTCAAAAGGCTCAATTCGTCTTATTGATCTGCGGCAGTCAGCTTTATGTGACAATCATAGCAAATTGTTTGAAGAACAAGAAGCACCCGGTTCAAGATCTTTTTTCACTGAGATAATAGCCTCAATTTCAGATATTAAGTTTGCTAAGAATGGAAGACATTTACTTAGCCGTGATTACATGACTCTTAAGCTGTGGGACATCAATATGGATTCTGGCCCAGTTGCGAGTTTCCAGGTTCATGAATATCTAAGACCTAAGCTGTGTGATTTGTATGAAAACGATTCTATCTTCGATAAATTTGAGTGCTGTCTAAGTGGAGATGGAGTTCGAGTGGCAACAGGTTCTTACAGCAATCTGTTTCGAGTGTTTGGTTGTTCTGACGGGAGCACAGAAGCAACGACATTGGAGGCCAGCAAAAACCCCATGAGGAGACAAGTCCAAACACCATCAAGGCCTGCTAGATCTTTGGGTAATCTTCCTCGTGTTCTGAGGCGTGGTGCGGATAATTCTGGAGCTGATACAAATGGAAATGGTTTTGATTTCACGACTAAGTTGCTACATCTTGCATGGCATCCTACTGAGAATTCACTTGCTTGTGCTGCTTCAAATAGCCTTTACATGTTGACAAAGGCTGCTTTGCCTTCTTTCCCAGCTAGCGATGTGAAGCTGCATCCTTATAACCTCTGCAAACCATTACCTAACTGTGCGACATCAGGAAACCTTTCTGCTGATACAAATTTTTGCAAGAAGAAATTAGTCTCAAATTCAGGCGGGACATTGCTGTTTATGCTATATCATAAAGCGGATGGTTTGTCCAAATTATGTACCATTAGTGGAAGAGATGTGATATTAGCTCATCTGCCTACTGTGAAAGAGAACTGGGTTGTTATTGTTGCTACAGTGGAAAGCAGTCAGGTCCTATCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000159 GO:0000278 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008287 GO:0009987 GO:0010921 GO:0016311 GO:0019208 GO:0019220 GO:0019222 GO:0019538 GO:0019888 GO:0030234 GO:0031323 GO:0031399 GO:0032268 GO:0032502 GO:0032991 GO:0035303 GO:0035304 GO:0036211 GO:0043170 GO:0043412 GO:0043666 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051174 GO:0051246 GO:0051336 GO:0060255 GO:0065007 GO:0065009 GO:0070262 GO:0071704 GO:0080090 GO:0098772 GO:1901564 GO:1902494 GO:1903293

KEGG Pathways

Metabolic & Signaling

ko03015 ko04071 ko04111 ko04151 ko04152 ko04261 ko04390 ko04391 ko04530 ko04728 ko05142 ko05160 ko05165 map03015 map04071 map04111 map04151 map04152 map04261 map04390 map04391 map04530 map04728 map05142 map05160 map05165

Pfam Domains

Protein Families

WD40

Protein Analysis

617

Amino Acids

68.02

Weight (kDa)

6.21

Isoelectric Point (pI)

40.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17720 AT1G17720 AT1G51690 AT1G51690 AT1G51690 AT1G51690 AT1G51690
fragaria_vesca	FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_6g33020 FvH4_6g33020 FvH4_6g33020 FvH4_6g33020
malus_domestica	MD08G1043800.v1.1 MD08G1043900.v1.1 MD08G1044000.v1.1 MD09G1195400.v1.1 MD15G1061300.v1.1 MD17G1176000.v1.1
prunus_persica	Prupe.1G414000_v2.0.a1 Prupe.1G414000_v2.0.a1 Prupe.3G052100_v2.0.a1 Prupe.3G052100_v2.0.a1
pyrus_communis	pycom08g03540 pycom15g05740 pycom17g18330
rosa_chinensis	RchiOBHm_Chr2g0142561 RchiOBHm_Chr6g0310651
rosa_laevigata	RLG00000010469 RLG00000019967
rosa_multiflora	Rmu_co8494963.1_g000001 Rmu_sc0000482.1_g000004 Rmu_sc0007390.1_g000003
rosa_roxburghii	Rroxscaffold_2G00102520 Rroxscaffold_7G00158380
rosa_rugosa	Rorug02G0373900 Rorug02G0374000 Rorug06G0381900 Rorug06G0381900 Rorug06G0381900
rosa_samantha	Rh2BG435300 Rh2DG445300 Rh6BG505400
rosa_wichuraiana	Rw2G034890 Rw6G043120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1602
AatII	GACGTC	1 cut(s)	41
Acc36I	ACCTGC	1 cut(s)	786
AccB1I	GGYRCC	1 cut(s)	61
AccBSI	CCGCTC	1 cut(s)	47
AccII	CGCG	1 cut(s)	26
AclWI	GGATC	2 cut(s)	501, 864
AcsI	RAATTY	9 cut(s)	149, 375, 440, 543, 884, 1220, 1507, 1660, 1687
AcuI	CTGAAG	2 cut(s)	362, 861
AcyI	GRCGYC	2 cut(s)	38, 62
AfaI	GTAC	2 cut(s)	535, 1750
AfiI	CCNNNNNNNGG	1 cut(s)	626
AflII	CTTAAG	1 cut(s)	1109
AflIII	ACRYGT	1 cut(s)	1542
AgsI	TTSAA	7 cut(s)	212, 615, 738, 823, 995, 1017, 1530
AjnI	CCWGG	1 cut(s)	1155
AloI	GAACNNNNNNTCC	2 cut(s)	1233, 1265
Alw21I	GWGCWC	2 cut(s)	241, 1313
Alw26I	GTCTC	3 cut(s)	662, 1348, 1687
Alw44I	GTGCAC	1 cut(s)	237
AlwI	GGATC	2 cut(s)	501, 864
Ama87I	CYCGRG	1 cut(s)	326
AoxI	GGCC	3 cut(s)	1138, 1332, 1376
ApaLI	GTGCAC	1 cut(s)	237
ApeKI	GCWGC	3 cut(s)	1523, 1556, 1591
ApoI	RAATTY	9 cut(s)	149, 375, 440, 543, 884, 1220, 1507, 1660, 1687
ArsI	GACNNNNNNTTYG	2 cut(s)	661, 693
AseI	ATTAAT	2 cut(s)	726, 786
Asp700I	GAANNNNTTC	1 cut(s)	1645
AspLEI	GCGC	2 cut(s)	64, 404
AspS9I	GGNCC	6 cut(s)	102, 166, 451, 518, 1139, 1840
AsuC2I	CCSGG	2 cut(s)	625, 1011
AsuHPI	GGTGA	2 cut(s)	667, 880
AsuNHI	GCTAGC	1 cut(s)	1577
AvaI	CYCGRG	1 cut(s)	326
AvaII	GGWCC	5 cut(s)	102, 166, 451, 518, 1840
BaeGI	GKGCMC	1 cut(s)	241
BanI	GGYRCC	1 cut(s)	61
BanII	GRGCYC	1 cut(s)	24
BauI	CACGAG	1 cut(s)	1404
BbsI	GAAGAC	1 cut(s)	1084
Bbv12I	GWGCWC	2 cut(s)	241, 1313
BbvI	GCAGC	3 cut(s)	1510, 1543, 1578
BccI	CCATC	9 cut(s)	375, 443, 596, 628, 643, 743, 1238, 1378, 1724
BceAI	ACGGC	4 cut(s)	22, 69, 75, 1077
BcgI	CGANNNNNNTGC	2 cut(s)	1459, 1493
BciT130I	CCWGG	1 cut(s)	1157
BcnI	CCSGG	2 cut(s)	625, 1011
BcoDI	GTCTC	3 cut(s)	662, 1348, 1687
BfaI	CTAG	3 cut(s)	684, 1383, 1578
BfmI	CTRYAG	2 cut(s)	144, 1821
BfoI	RGCGCY	1 cut(s)	65
BfrI	CTTAAG	1 cut(s)	1109
BfuAI	ACCTGC	1 cut(s)	786
BglII	AGATCT	3 cut(s)	250, 1019, 1385
BisI	GCNGC	7 cut(s)	10, 48, 65, 956, 1524, 1557, 1592
BlsI	GCNGC	7 cut(s)	11, 49, 66, 957, 1525, 1558, 1593
Bme1390I	CCNGG	3 cut(s)	625, 1011, 1157
Bme18I	GGWCC	5 cut(s)	102, 166, 451, 518, 1840
BmeT110I	CYCGRG	1 cut(s)	326
BmgT120I	GGNCC	6 cut(s)	102, 166, 451, 518, 1139, 1840
BmiI	GGNNCC	3 cut(s)	30, 63, 167
BmrFI	CCNGG	3 cut(s)	625, 1011, 1157
BmrI	ACTGGG	3 cut(s)	171, 1136, 1813
BmsI	GCATC	4 cut(s)	211, 292, 1504, 1603
BmtI	GCTAGC	1 cut(s)	1581
BmuI	ACTGGG	3 cut(s)	171, 1136, 1813
BpiI	GAAGAC	1 cut(s)	1084
BplI	GAGNNNNNCTC	1 cut(s)	38
BpmI	CTGGAG	3 cut(s)	63, 201, 1455
Bpu10I	CCTNAGC	1 cut(s)	1179
BpuMI	CCSGG	2 cut(s)	625, 1011
BsaHI	GRCGYC	2 cut(s)	38, 62
BsaJI	CCNNGG	2 cut(s)	225, 624
BsaXI	ACNNNNNCTCC	6 cut(s)	183, 213, 1233, 1239, 1263, 1269
Bsc4I	CCNNNNNNNGG	1 cut(s)	626
Bse118I	RCCGGY	1 cut(s)	107
Bse1I	ACTGG	7 cut(s)	77, 166, 184, 521, 660, 1142, 1808
Bse3DI	GCAATG	2 cut(s)	610, 1700
BseBI	CCWGG	1 cut(s)	1157
BseDI	CCNNGG	2 cut(s)	225, 624
BseGI	GGATG	6 cut(s)	283, 620, 635, 1495, 1594, 1735
BseLI	CCNNNNNNNGG	1 cut(s)	626
BseMI	GCAATG	2 cut(s)	610, 1700
BseMII	CTCAG	9 cut(s)	98, 279, 297, 471, 657, 855, 1023, 1403, 1494
BseNI	ACTGG	7 cut(s)	77, 166, 184, 521, 660, 1142, 1808
BseRI	GAGGAG	1 cut(s)	1366
BseSI	GKGCMC	1 cut(s)	241
BseXI	GCAGC	3 cut(s)	1510, 1543, 1578
BseYI	CCCAGC	1 cut(s)	1573
Bsh1236I	CGCG	1 cut(s)	26
BshFI	GGCC	3 cut(s)	1140, 1334, 1378
BshNI	GGYRCC	1 cut(s)	61
BsiHKAI	GWGCWC	2 cut(s)	241, 1313
BsiHKCI	CYCGRG	1 cut(s)	326
BsiSI	CCGG	4 cut(s)	32, 108, 624, 1011
BslFI	GGGAC	3 cut(s)	179, 1133, 1711
BslI	CCNNNNNNNGG	1 cut(s)	626
BsmAI	GTCTC	3 cut(s)	662, 1348, 1687
BsmFI	GGGAC	3 cut(s)	179, 1133, 1711
BsmI	GAATGC	1 cut(s)	651
BsnI	GGCC	3 cut(s)	1140, 1334, 1378
BsoBI	CYCGRG	1 cut(s)	326
Bsp1286I	GDGCHC	3 cut(s)	24, 241, 1313
Bsp143I	GATC	7 cut(s)	184, 250, 493, 856, 949, 1019, 1385
BspANI	GGCC	3 cut(s)	1140, 1334, 1378
BspCNI	CTCAG	9 cut(s)	97, 280, 298, 472, 658, 856, 1024, 1404, 1495
BspFNI	CGCG	1 cut(s)	26
BspHI	TCATGA	3 cut(s)	319, 712, 1162
BspLI	GGNNCC	3 cut(s)	30, 63, 167
BspMI	ACCTGC	1 cut(s)	786
BspOI	GCTAGC	1 cut(s)	1581
BspPI	GGATC	2 cut(s)	501, 864
BspQI	GCTCTTC	1 cut(s)	338
BspT107I	GGYRCC	1 cut(s)	61
BspTI	CTTAAG	1 cut(s)	1109
BsrBI	CCGCTC	1 cut(s)	47
BsrDI	GCAATG	2 cut(s)	610, 1700
BsrFI	RCCGGY	1 cut(s)	107
BsrI	ACTGG	7 cut(s)	77, 166, 184, 521, 660, 1142, 1808
BssAI	RCCGGY	1 cut(s)	107
BssECI	CCNNGG	2 cut(s)	225, 624
BssMI	GATC	7 cut(s)	184, 250, 493, 856, 949, 1019, 1385
BssNI	GRCGYC	2 cut(s)	38, 62
BssSI	CACGAG	1 cut(s)	1404
BssT1I	CCWWGG	1 cut(s)	225
Bst2BI	CACGAG	1 cut(s)	1404
Bst2UI	CCWGG	1 cut(s)	1157
Bst4CI	ACNGT	7 cut(s)	408, 533, 902, 920, 1628, 1792, 1825
Bst6I	CTCTTC	3 cut(s)	338, 688, 1756
BstACI	GRCGYC	2 cut(s)	38, 62
BstAFI	CTTAAG	1 cut(s)	1109
BstC8I	GCNNGC	6 cut(s)	24, 109, 281, 1336, 1380, 1579
BstEII	GGTNACC	1 cut(s)	655
BstF5I	GGATG	6 cut(s)	283, 620, 635, 1495, 1594, 1735
BstFNI	CGCG	1 cut(s)	26
BstH2I	RGCGCY	1 cut(s)	65
BstHHI	GCGC	2 cut(s)	64, 404
BstKTI	GATC	7 cut(s)	187, 253, 496, 859, 952, 1022, 1388
BstMAI	GTCTC	3 cut(s)	662, 1348, 1687
BstMBI	GATC	7 cut(s)	184, 250, 493, 856, 949, 1019, 1385
BstMWI	GCNNNNNNNGC	7 cut(s)	32, 53, 401, 600, 930, 1523, 1711
BstNI	CCWGG	1 cut(s)	1157
BstNSI	RCATGY	1 cut(s)	1546
BstPI	GGTNACC	1 cut(s)	655
BstSCI	CCNGG	3 cut(s)	623, 1009, 1155
BstSFI	CTRYAG	2 cut(s)	144, 1821
BstSLI	GKGCMC	1 cut(s)	241
BstUI	CGCG	1 cut(s)	26
BstV1I	GCAGC	3 cut(s)	1510, 1543, 1578
BstV2I	GAAGAC	1 cut(s)	1084
BstX2I	RGATCY	4 cut(s)	250, 856, 1019, 1385
BstYI	RGATCY	4 cut(s)	250, 856, 1019, 1385
BsuRI	GGCC	3 cut(s)	1140, 1334, 1378
BtgZI	GCGATG	1 cut(s)	1596
BtsCI	GGATG	6 cut(s)	283, 620, 635, 1495, 1594, 1735
BtsIMutI	CAGTG	5 cut(s)	177, 404, 898, 1029, 1830
BveI	ACCTGC	1 cut(s)	786
Cac8I	GCNNGC	6 cut(s)	24, 109, 281, 1336, 1380, 1579
CciI	TCATGA	3 cut(s)	319, 712, 1162
CfoI	GCGC	2 cut(s)	64, 404
Cfr10I	RCCGGY	1 cut(s)	107
Cfr13I	GGNCC	6 cut(s)	102, 166, 451, 518, 1139, 1840
CpoI	CGGWCCG	1 cut(s)	102
Csp6I	GTAC	2 cut(s)	534, 1749
CspI	CGGWCCG	1 cut(s)	102
CviQI	GTAC	2 cut(s)	534, 1749
DinI	GGCGCC	1 cut(s)	63
DpnI	GATC	7 cut(s)	186, 252, 495, 858, 951, 1021, 1387
DpnII	GATC	7 cut(s)	184, 250, 493, 856, 949, 1019, 1385
Eam1104I	CTCTTC	3 cut(s)	338, 688, 1756
EarI	CTCTTC	3 cut(s)	338, 688, 1756
EciI	GGCGGA	1 cut(s)	27
Eco130I	CCWWGG	1 cut(s)	225
Eco147I	AGGCCT	1 cut(s)	1378
Eco24I	GRGCYC	1 cut(s)	24
Eco47I	GGWCC	5 cut(s)	102, 166, 451, 518, 1840
Eco57I	CTGAAG	2 cut(s)	362, 861
Eco88I	CYCGRG	1 cut(s)	326
Eco91I	GGTNACC	1 cut(s)	655
EcoO109I	RGGNCCY	1 cut(s)	1840
EcoO65I	GGTNACC	1 cut(s)	655
EcoRI	GAATTC	3 cut(s)	149, 884, 1507
EcoRII	CCWGG	1 cut(s)	1155
EcoT14I	CCWWGG	1 cut(s)	225
EcoT38I	GRGCYC	1 cut(s)	24
EgeI	GGCGCC	1 cut(s)	63
EheI	GGCGCC	1 cut(s)	63
ErhI	CCWWGG	1 cut(s)	225
FaqI	GGGAC	3 cut(s)	179, 1133, 1711
FauI	CCCGC	1 cut(s)	1688
Fnu4HI	GCNGC	7 cut(s)	10, 48, 65, 956, 1524, 1557, 1592
FokI	GGATG	6 cut(s)	270, 607, 622, 1482, 1581, 1742
FriOI	GRGCYC	1 cut(s)	24
Fsp4HI	GCNGC	7 cut(s)	10, 48, 65, 956, 1524, 1557, 1592
FspBI	CTAG	3 cut(s)	684, 1383, 1578
GlaI	GCGC	2 cut(s)	63, 403
GluI	GCNGC	7 cut(s)	10, 48, 65, 956, 1524, 1557, 1592
GsaI	CCCAGC	1 cut(s)	1577
GsuI	CTGGAG	3 cut(s)	63, 201, 1455
HaeII	RGCGCY	1 cut(s)	65
HaeIII	GGCC	3 cut(s)	1140, 1334, 1378
HapII	CCGG	4 cut(s)	32, 108, 624, 1011
HhaI	GCGC	2 cut(s)	64, 404
Hin1I	GRCGYC	2 cut(s)	38, 62
Hin6I	GCGC	2 cut(s)	62, 402
HinP1I	GCGC	2 cut(s)	62, 402
HincII	GTYRAC	2 cut(s)	529, 1548
HindII	GTYRAC	2 cut(s)	529, 1548
HinfI	GANTC	5 cut(s)	316, 696, 1105, 1133, 1205
HpaII	CCGG	4 cut(s)	32, 108, 624, 1011
HphI	GGTGA	2 cut(s)	667, 880
Hpy166II	GTNNAC	3 cut(s)	239, 529, 1548
Hpy188I	TCNGA	8 cut(s)	95, 246, 342, 390, 481, 1054, 1303, 1413
Hpy8I	GTNNAC	3 cut(s)	239, 529, 1548
Hpy99I	CGWCG	3 cut(s)	40, 55, 61
HpyAV	CCTTC	3 cut(s)	442, 457, 1575
HpyCH4III	ACNGT	7 cut(s)	408, 533, 902, 920, 1628, 1792, 1825
HpyCH4IV	ACGT	1 cut(s)	38
HpyCH4V	TGCA	6 cut(s)	239, 563, 1490, 1594, 1611, 1668
HpyF10VI	GCNNNNNNNGC	7 cut(s)	32, 53, 401, 600, 930, 1523, 1711
HpySE526I	ACGT	1 cut(s)	38
Hsp92I	GRCGYC	2 cut(s)	38, 62
HspAI	GCGC	2 cut(s)	62, 402
KasI	GGCGCC	1 cut(s)	61
KroI	GCCGGC	1 cut(s)	107
KroNI	GCCGGC	1 cut(s)	109
Kzo9I	GATC	7 cut(s)	184, 250, 493, 856, 949, 1019, 1385
LguI	GCTCTTC	1 cut(s)	338
LmnI	GCTCC	3 cut(s)	44, 1308, 1436
Lsp1109I	GCAGC	3 cut(s)	1510, 1543, 1578
LweI	GCATC	4 cut(s)	211, 292, 1504, 1603
MaeI	CTAG	3 cut(s)	684, 1383, 1578
MaeII	ACGT	1 cut(s)	38
MaeIII	GTNAC	3 cut(s)	655, 902, 971
MalI	GATC	7 cut(s)	186, 252, 495, 858, 951, 1021, 1387
MbiI	CCGCTC	1 cut(s)	47
MboI	GATC	7 cut(s)	184, 250, 493, 856, 949, 1019, 1385
MflI	RGATCY	4 cut(s)	250, 856, 1019, 1385
MhlI	GDGCHC	3 cut(s)	24, 241, 1313
Mly113I	GGCGCC	1 cut(s)	62
MlyI	GAGTC	3 cut(s)	325, 705, 1099
MreI	CGCCGGCG	1 cut(s)	107
MroNI	GCCGGC	1 cut(s)	107
MroXI	GAANNNNTTC	1 cut(s)	1645
MseI	TTAA	4 cut(s)	726, 786, 1059, 1110
MslI	CAYNNNNRTG	2 cut(s)	711, 1127
MspA1I	CMGCKG	1 cut(s)	67
MspCI	CTTAAG	1 cut(s)	1109
MspI	CCGG	4 cut(s)	32, 108, 624, 1011
MspR9I	CCNGG	3 cut(s)	625, 1011, 1157
Mva1269I	GAATGC	1 cut(s)	651
MvaI	CCWGG	1 cut(s)	1157
MvnI	CGCG	1 cut(s)	26
MwoI	GCNNNNNNNGC	7 cut(s)	32, 53, 401, 600, 930, 1523, 1711
NaeI	GCCGGC	1 cut(s)	109
NarI	GGCGCC	1 cut(s)	62
NciI	CCSGG	2 cut(s)	625, 1011
NdeII	GATC	7 cut(s)	184, 250, 493, 856, 949, 1019, 1385
NgoMIV	GCCGGC	1 cut(s)	107
NheI	GCTAGC	1 cut(s)	1577
NlaIV	GGNNCC	3 cut(s)	30, 63, 167
NmuCI	GTSAC	2 cut(s)	655, 971
NspI	RCATGY	1 cut(s)	1546
PagI	TCATGA	3 cut(s)	319, 712, 1162
PceI	AGGCCT	1 cut(s)	1378
PciI	ACATGT	1 cut(s)	1542
PciSI	GCTCTTC	1 cut(s)	338
PctI	GAATGC	1 cut(s)	651
PdiI	GCCGGC	1 cut(s)	109
PdmI	GAANNNNTTC	1 cut(s)	1645
PfeI	GAWTC	2 cut(s)	1133, 1205
PkrI	GCNGC	7 cut(s)	11, 49, 66, 957, 1525, 1558, 1593
PleI	GAGTC	3 cut(s)	324, 704, 1099
PluTI	GGCGCC	1 cut(s)	65
PpsI	GAGTC	3 cut(s)	324, 704, 1099
PpuMI	RGGWCCY	1 cut(s)	1840
PscI	ACATGT	1 cut(s)	1542
PshBI	ATTAAT	2 cut(s)	726, 786
PsiI	TTATAA	1 cut(s)	1602
Psp5II	RGGWCCY	1 cut(s)	1840
Psp6I	CCWGG	1 cut(s)	1155
PspEI	GGTNACC	1 cut(s)	655
PspFI	CCCAGC	1 cut(s)	1573
PspGI	CCWGG	1 cut(s)	1155
PspN4I	GGNNCC	3 cut(s)	30, 63, 167
PspPI	GGNCC	6 cut(s)	102, 166, 451, 518, 1139, 1840
PspPPI	RGGWCCY	1 cut(s)	1840
PsuI	RGATCY	4 cut(s)	250, 856, 1019, 1385
RsaI	GTAC	2 cut(s)	535, 1750
RsaNI	GTAC	2 cut(s)	534, 1749
RseI	CAYNNNNRTG	2 cut(s)	711, 1127
Rsr2I	CGGWCCG	1 cut(s)	102
RsrII	CGGWCCG	1 cut(s)	102
SapI	GCTCTTC	1 cut(s)	338
SaqAI	TTAA	4 cut(s)	726, 786, 1059, 1110
SatI	GCNGC	7 cut(s)	10, 48, 65, 956, 1524, 1557, 1592
Sau3AI	GATC	7 cut(s)	184, 250, 493, 856, 949, 1019, 1385
Sau96I	GGNCC	6 cut(s)	102, 166, 451, 518, 1139, 1840
SchI	GAGTC	3 cut(s)	325, 705, 1099
ScrFI	CCNGG	3 cut(s)	625, 1011, 1157
SduI	GDGCHC	3 cut(s)	24, 241, 1313
SfaNI	GCATC	4 cut(s)	211, 292, 1504, 1603
SfcI	CTRYAG	2 cut(s)	144, 1821
SfoI	GGCGCC	1 cut(s)	63
SgrAI	CRCCGGYG	1 cut(s)	107
SinI	GGWCC	5 cut(s)	102, 166, 451, 518, 1840
SmiMI	CAYNNNNRTG	2 cut(s)	711, 1127
SmlI	CTYRAG	1 cut(s)	1109
SmoI	CTYRAG	1 cut(s)	1109
SseBI	AGGCCT	1 cut(s)	1378
SspDI	GGCGCC	1 cut(s)	61
SspI	AATATT	1 cut(s)	826
SspMI	CTAG	3 cut(s)	684, 1383, 1578
StuI	AGGCCT	1 cut(s)	1378
StyD4I	CCNGG	3 cut(s)	623, 1009, 1155
StyI	CCWWGG	1 cut(s)	225
TaaI	ACNGT	7 cut(s)	408, 533, 902, 920, 1628, 1792, 1825
TaiI	ACGT	1 cut(s)	41
TaqI	TCGA	8 cut(s)	153, 357, 379, 419, 691, 1215, 1252, 1285
TauI	GCSGC	4 cut(s)	12, 50, 67, 958
TfiI	GAWTC	2 cut(s)	1133, 1205
Tru1I	TTAA	4 cut(s)	726, 786, 1059, 1110
Tru9I	TTAA	4 cut(s)	726, 786, 1059, 1110
TscAI	CASTG	5 cut(s)	184, 411, 905, 1036, 1830
TseFI	GTSAC	2 cut(s)	655, 971
TseI	GCWGC	3 cut(s)	1523, 1556, 1591
Tsp45I	GTSAC	2 cut(s)	655, 971
TspDTI	ATGAA	6 cut(s)	17, 336, 500, 1151, 1179, 1212
TspGWI	ACGGA	1 cut(s)	115
TspRI	CASTG	5 cut(s)	184, 411, 905, 1036, 1830
Vha464I	CTTAAG	1 cut(s)	1109
VneI	GTGCAC	1 cut(s)	237
VpaK11BI	GGWCC	5 cut(s)	102, 166, 451, 518, 1840
VspI	ATTAAT	2 cut(s)	726, 786
XapI	RAATTY	9 cut(s)	149, 375, 440, 543, 884, 1220, 1507, 1660, 1687
XceI	RCATGY	1 cut(s)	1546
XcmI	CCANNNNNNNNNTGG	1 cut(s)	176
XmnI	GAANNNNTTC	1 cut(s)	1645
XspI	CTAG	3 cut(s)	684, 1383, 1578
ZraI	GACGTC	1 cut(s)	39

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.