Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0001642

Physical Location & Seq

Genomic Coordinates Reverse (-)

70337024 .. 70341782

Gene Structure 4759 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG505400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGAACGGCGGCGGAGAGGGGCTCGCGGCTCCGGCGACGTCTGGAGCGGCTCCGGCGACGCTTGACTGGAAGTTTTCTCAGGTTTTCGGAGAACGGACCGCCGGCGAGGAAGTTCAGGAAGTTGATATAATATCTGCTATAGAATTCGATAGAACTGGGGACCACCTTGCCACTGGAGATCGTGGAGGGAGGGTGGTGTTATTTGAAAGAACTGATGCCAAGGAGAATGGTGCACATCGGAAAGATCTGGAAAGAATGGATTATTCCATGAGCAAGCATCCTGAGTTTCGATATAAAACTGAGTTCCAGAGTCATGAACCCGAGTTTGATTATCTGAAGAGCTTGGAAATCGAGGAAAAAATCAACAAGATTCGATGGTGTCAGACAGCTAACGGCGCACTGTTTCTTCTCTCGACTAATGACAAAACCATCAAATTCTGGAAGGTCCAAGAAAAGAAGGTAAAGAAATTATCTGAGATGAATGTGGATCAGTCTAAATCTTCGGGGAATGGTCCAGTTGTTGACAGTACGCCAGAAATTTCCAAACCATATCTTGCAAATGGAGTATGTAAAGATAAACCCATCAGCTTTCCAAGCAATGATAGTTCAATTCCATCCGGGGGTTTCCCATCCCTGCGAATGCCTGTGGTAGTGACCAGTCCTGAGACAAGTCTTCTGGCTAGATGTCGAAGAGTCTATGCCCATGCTCATGACTATCATATTAATTCCATTTCAAATAATAGTGATGGCGAAACTTTTATATCAGCCGATGACCTGCGAATTAATCTATGGAACTTAGAGATTAGCAGTCAAAGTTTCAATATTGTTGATGTGAAACCTACAAACATGGAGGATCTAACTGAGGTGATAACTTCAGCAGAATTCCACCCTACTCACTGTAACACATTGGCATACAGTAGCTCAAAAGGCTCAATTCGTCTTATTGATCTGCGGCAGTCAGCTTTATGTGACAATCATAGCAAATTGTTTGAAGAACAAGAAGCACCCGGTTCAAGATCTTTTTTCACTGAGATAATAGCCTCAATTTCAGATATTAAGTTTGCTAAGAATGGAAGACATATACTTAGCCGTGATTACATGACTCTTAAGCTGTGGGACATCAATATGGATTCTGGCCCAGTTGCGAGTTTCCAGGTTCATGAATATCTAAGACCTAAGCTGTGTGATTTGTATGAAAACGATTCTATCTTCGATAAATTTGAGTGCTGTCTAAGTGGAGATGGAGTTCGAGTGGCAACAGGTTCTTACAGCAATCTGTTTCGAGTGTTTGGTTGTTCTGAAGGGAGCACAGAAGCAACGACATTGGAGGCCAGCAAAAACCCCATGAGGAGACAAGTCCAAACACCATCAAGGCCTGCTAGATCTTTGGGTAATCTTCCTCGTGTTCTGAGGCGTGGTGCGGATAATTCTGGAGCTGATACAAATGGAAATGGTTTTGATTTCACGACAAAGTTGCTACATCTTGCATGGCATCCTACTGAGAATTCACTTGCATGTGCTGCTTCAAATAGCCTTTACATGTATTATGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000159 GO:0000278 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008287 GO:0009987 GO:0010921 GO:0016311 GO:0019208 GO:0019220 GO:0019222 GO:0019538 GO:0019888 GO:0030234 GO:0031323 GO:0031399 GO:0032268 GO:0032502 GO:0032991 GO:0035303 GO:0035304 GO:0036211 GO:0043170 GO:0043412 GO:0043666 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051174 GO:0051246 GO:0051336 GO:0060255 GO:0065007 GO:0065009 GO:0070262 GO:0071704 GO:0080090 GO:0098772 GO:1901564 GO:1902494 GO:1903293

KEGG Pathways

Metabolic & Signaling

ko03015 ko04071 ko04111 ko04151 ko04152 ko04261 ko04390 ko04391 ko04530 ko04728 ko05142 ko05160 ko05165 map03015 map04071 map04111 map04151 map04152 map04261 map04390 map04391 map04530 map04728 map05142 map05160 map05165

Pfam Domains

Protein Families

WD40

Protein Analysis

517

Amino Acids

57.55

Weight (kDa)

5.76

Isoelectric Point (pI)

47.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17720 AT1G17720 AT1G51690 AT1G51690 AT1G51690 AT1G51690 AT1G51690
fragaria_vesca	FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_6g33020 FvH4_6g33020 FvH4_6g33020 FvH4_6g33020
malus_domestica	MD08G1043800.v1.1 MD08G1043900.v1.1 MD08G1044000.v1.1 MD09G1195400.v1.1 MD15G1061300.v1.1 MD17G1176000.v1.1
prunus_persica	Prupe.1G414000_v2.0.a1 Prupe.1G414000_v2.0.a1 Prupe.3G052100_v2.0.a1 Prupe.3G052100_v2.0.a1
pyrus_communis	pycom08g03540 pycom15g05740 pycom17g18330
rosa_chinensis	RchiOBHm_Chr2g0142561 RchiOBHm_Chr6g0310651
rosa_laevigata	RLG00000010469 RLG00000019967
rosa_multiflora	Rmu_co8494963.1_g000001 Rmu_sc0000482.1_g000004 Rmu_sc0007390.1_g000003
rosa_roxburghii	Rroxscaffold_2G00102520 Rroxscaffold_7G00158380
rosa_rugosa	Rorug02G0373900 Rorug02G0374000 Rorug06G0381900 Rorug06G0381900 Rorug06G0381900
rosa_samantha	Rh2BG435300 Rh2DG445300 Rh6BG505400
rosa_wichuraiana	Rw2G034890 Rw6G043120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	41
Acc36I	ACCTGC	1 cut(s)	783
AccBSI	CCGCTC	1 cut(s)	47
AccII	CGCG	1 cut(s)	26
AciI	CCGC	7 cut(s)	9, 12, 26, 47, 99, 952, 1421
AclWI	GGATC	2 cut(s)	495, 861
AcsI	RAATTY	6 cut(s)	143, 434, 537, 881, 1217, 1504
AcuI	CTGAAG	3 cut(s)	356, 858, 1320
AcyI	GRCGYC	1 cut(s)	38
AfaI	GTAC	1 cut(s)	529
AfiI	CCNNNNNNNGG	1 cut(s)	620
AflII	CTTAAG	1 cut(s)	1106
AflIII	ACRYGT	1 cut(s)	1539
AgsI	TTSAA	7 cut(s)	206, 609, 735, 820, 992, 1014, 1527
AjnI	CCWGG	1 cut(s)	1152
AloI	GAACNNNNNNTCC	2 cut(s)	1230, 1262
AluBI	AGCT	8 cut(s)	342, 389, 588, 921, 962, 1111, 1180, 1436
AluI	AGCT	8 cut(s)	342, 389, 588, 921, 962, 1111, 1180, 1436
Alw21I	GWGCWC	2 cut(s)	235, 1310
Alw26I	GTCTC	2 cut(s)	659, 1345
Alw44I	GTGCAC	1 cut(s)	231
AlwI	GGATC	2 cut(s)	495, 861
Ama87I	CYCGRG	1 cut(s)	320
AoxI	GGCC	3 cut(s)	1135, 1329, 1373
ApaLI	GTGCAC	1 cut(s)	231
ApeKI	GCWGC	1 cut(s)	1520
ApoI	RAATTY	6 cut(s)	143, 434, 537, 881, 1217, 1504
AseI	ATTAAT	2 cut(s)	723, 783
AspLEI	GCGC	1 cut(s)	398
AspS9I	GGNCC	5 cut(s)	96, 160, 445, 512, 1136
AsuC2I	CCSGG	2 cut(s)	619, 1008
AsuHPI	GGTGA	1 cut(s)	877
AvaI	CYCGRG	1 cut(s)	320
AvaII	GGWCC	4 cut(s)	96, 160, 445, 512
BaeGI	GKGCMC	1 cut(s)	235
BanII	GRGCYC	1 cut(s)	24
BauI	CACGAG	1 cut(s)	1401
BbsI	GAAGAC	2 cut(s)	665, 1081
Bbv12I	GWGCWC	2 cut(s)	235, 1310
BbvI	GCAGC	1 cut(s)	1507
BccI	CCATC	8 cut(s)	369, 437, 590, 622, 637, 740, 1235, 1375
BceAI	ACGGC	3 cut(s)	22, 409, 1074
BcgI	CGANNNNNNTGC	2 cut(s)	1456, 1490
BciT130I	CCWGG	1 cut(s)	1154
BcnI	CCSGG	2 cut(s)	619, 1008
BcoDI	GTCTC	2 cut(s)	659, 1345
BfaI	CTAG	2 cut(s)	681, 1380
BfmI	CTRYAG	1 cut(s)	138
BfrI	CTTAAG	1 cut(s)	1106
BfuAI	ACCTGC	1 cut(s)	783
BglII	AGATCT	3 cut(s)	244, 1016, 1382
BisI	GCNGC	5 cut(s)	10, 27, 48, 953, 1521
BlsI	GCNGC	5 cut(s)	11, 28, 49, 954, 1522
Bme1390I	CCNGG	3 cut(s)	619, 1008, 1154
Bme18I	GGWCC	4 cut(s)	96, 160, 445, 512
BmeT110I	CYCGRG	1 cut(s)	320
BmgT120I	GGNCC	5 cut(s)	96, 160, 445, 512, 1136
BmiI	GGNNCC	3 cut(s)	30, 51, 161
BmrFI	CCNGG	3 cut(s)	619, 1008, 1154
BmrI	ACTGGG	2 cut(s)	165, 1133
BmsI	GCATC	3 cut(s)	205, 286, 1501
BmuI	ACTGGG	2 cut(s)	165, 1133
BpiI	GAAGAC	2 cut(s)	665, 1081
BplI	GAGNNNNNCTC	1 cut(s)	38
BpmI	CTGGAG	3 cut(s)	63, 195, 1452
Bpu10I	CCTNAGC	1 cut(s)	1176
BpuMI	CCSGG	2 cut(s)	619, 1008
BsaHI	GRCGYC	1 cut(s)	38
BsaJI	CCNNGG	2 cut(s)	219, 618
BsaXI	ACNNNNNCTCC	6 cut(s)	177, 207, 1230, 1236, 1260, 1266
Bsc4I	CCNNNNNNNGG	1 cut(s)	620
Bse118I	RCCGGY	1 cut(s)	101
Bse1I	ACTGG	6 cut(s)	71, 160, 178, 515, 657, 1139
Bse3DI	GCAATG	1 cut(s)	604
BseBI	CCWGG	1 cut(s)	1154
BseDI	CCNNGG	2 cut(s)	219, 618
BseGI	GGATG	4 cut(s)	277, 614, 629, 1492
BseLI	CCNNNNNNNGG	1 cut(s)	620
BseMI	GCAATG	1 cut(s)	604
BseMII	CTCAG	9 cut(s)	92, 273, 291, 465, 654, 852, 1020, 1400, 1491
BseNI	ACTGG	6 cut(s)	71, 160, 178, 515, 657, 1139
BseRI	GAGGAG	1 cut(s)	1363
BseSI	GKGCMC	1 cut(s)	235
BseXI	GCAGC	1 cut(s)	1507
Bsh1236I	CGCG	1 cut(s)	26
BshFI	GGCC	3 cut(s)	1137, 1331, 1375
BsiHKAI	GWGCWC	2 cut(s)	235, 1310
BsiHKCI	CYCGRG	1 cut(s)	320
BsiSI	CCGG	5 cut(s)	32, 53, 102, 618, 1008
BslFI	GGGAC	2 cut(s)	173, 1130
BslI	CCNNNNNNNGG	1 cut(s)	620
BsmAI	GTCTC	2 cut(s)	659, 1345
BsmFI	GGGAC	2 cut(s)	173, 1130
BsmI	GAATGC	1 cut(s)	645
BsnI	GGCC	3 cut(s)	1137, 1331, 1375
BsoBI	CYCGRG	1 cut(s)	320
Bsp1286I	GDGCHC	3 cut(s)	24, 235, 1310
Bsp143I	GATC	7 cut(s)	178, 244, 487, 853, 946, 1016, 1382
BspACI	CCGC	7 cut(s)	9, 12, 26, 47, 99, 952, 1421
BspANI	GGCC	3 cut(s)	1137, 1331, 1375
BspCNI	CTCAG	9 cut(s)	91, 274, 292, 466, 655, 853, 1021, 1401, 1492
BspFNI	CGCG	1 cut(s)	26
BspHI	TCATGA	3 cut(s)	313, 709, 1159
BspLI	GGNNCC	3 cut(s)	30, 51, 161
BspMI	ACCTGC	1 cut(s)	783
BspPI	GGATC	2 cut(s)	495, 861
BspQI	GCTCTTC	1 cut(s)	332
BspTI	CTTAAG	1 cut(s)	1106
BsrBI	CCGCTC	1 cut(s)	47
BsrDI	GCAATG	1 cut(s)	604
BsrFI	RCCGGY	1 cut(s)	101
BsrI	ACTGG	6 cut(s)	71, 160, 178, 515, 657, 1139
BssAI	RCCGGY	1 cut(s)	101
BssECI	CCNNGG	2 cut(s)	219, 618
BssMI	GATC	7 cut(s)	178, 244, 487, 853, 946, 1016, 1382
BssNI	GRCGYC	1 cut(s)	38
BssSI	CACGAG	1 cut(s)	1401
BssT1I	CCWWGG	1 cut(s)	219
Bst2BI	CACGAG	1 cut(s)	1401
Bst2UI	CCWGG	1 cut(s)	1154
Bst4CI	ACNGT	4 cut(s)	402, 527, 899, 917
Bst6I	CTCTTC	2 cut(s)	332, 685
BstACI	GRCGYC	1 cut(s)	38
BstAFI	CTTAAG	1 cut(s)	1106
BstAPI	GCANNNNNTGC	1 cut(s)	1520
BstC8I	GCNNGC	5 cut(s)	24, 103, 275, 1333, 1377
BstF5I	GGATG	4 cut(s)	277, 614, 629, 1492
BstFNI	CGCG	1 cut(s)	26
BstHHI	GCGC	1 cut(s)	398
BstKTI	GATC	7 cut(s)	181, 247, 490, 856, 949, 1019, 1385
BstMAI	GTCTC	2 cut(s)	659, 1345
BstMBI	GATC	7 cut(s)	178, 244, 487, 853, 946, 1016, 1382
BstMWI	GCNNNNNNNGC	6 cut(s)	32, 53, 395, 594, 927, 1520
BstNI	CCWGG	1 cut(s)	1154
BstNSI	RCATGY	2 cut(s)	1518, 1543
BstSCI	CCNGG	3 cut(s)	617, 1006, 1152
BstSFI	CTRYAG	1 cut(s)	138
BstSLI	GKGCMC	1 cut(s)	235
BstUI	CGCG	1 cut(s)	26
BstV1I	GCAGC	1 cut(s)	1507
BstV2I	GAAGAC	2 cut(s)	665, 1081
BstX2I	RGATCY	4 cut(s)	244, 853, 1016, 1382
BstYI	RGATCY	4 cut(s)	244, 853, 1016, 1382
BsuRI	GGCC	3 cut(s)	1137, 1331, 1375
BtsCI	GGATG	4 cut(s)	277, 614, 629, 1492
BtsIMutI	CAGTG	4 cut(s)	171, 398, 895, 1026
BveI	ACCTGC	1 cut(s)	783
Cac8I	GCNNGC	5 cut(s)	24, 103, 275, 1333, 1377
CciI	TCATGA	3 cut(s)	313, 709, 1159
CfoI	GCGC	1 cut(s)	398
Cfr10I	RCCGGY	1 cut(s)	101
Cfr13I	GGNCC	5 cut(s)	96, 160, 445, 512, 1136
CpoI	CGGWCCG	1 cut(s)	96
CseI	GACGC	1 cut(s)	67
Csp6I	GTAC	1 cut(s)	528
CspI	CGGWCCG	1 cut(s)	96
CviQI	GTAC	1 cut(s)	528
DpnI	GATC	7 cut(s)	180, 246, 489, 855, 948, 1018, 1384
DpnII	GATC	7 cut(s)	178, 244, 487, 853, 946, 1016, 1382
Eam1104I	CTCTTC	2 cut(s)	332, 685
EarI	CTCTTC	2 cut(s)	332, 685
EciI	GGCGGA	1 cut(s)	27
Eco130I	CCWWGG	1 cut(s)	219
Eco147I	AGGCCT	1 cut(s)	1375
Eco24I	GRGCYC	1 cut(s)	24
Eco47I	GGWCC	4 cut(s)	96, 160, 445, 512
Eco57I	CTGAAG	3 cut(s)	356, 858, 1320
Eco88I	CYCGRG	1 cut(s)	320
EcoRI	GAATTC	3 cut(s)	143, 881, 1504
EcoRII	CCWGG	1 cut(s)	1152
EcoT14I	CCWWGG	1 cut(s)	219
EcoT38I	GRGCYC	1 cut(s)	24
ErhI	CCWWGG	1 cut(s)	219
FaqI	GGGAC	2 cut(s)	173, 1130
Fnu4HI	GCNGC	5 cut(s)	10, 27, 48, 953, 1521
FokI	GGATG	4 cut(s)	264, 601, 616, 1479
FriOI	GRGCYC	1 cut(s)	24
Fsp4HI	GCNGC	5 cut(s)	10, 27, 48, 953, 1521
FspBI	CTAG	2 cut(s)	681, 1380
GlaI	GCGC	1 cut(s)	397
GluI	GCNGC	5 cut(s)	10, 27, 48, 953, 1521
GsuI	CTGGAG	3 cut(s)	63, 195, 1452
HaeIII	GGCC	3 cut(s)	1137, 1331, 1375
HapII	CCGG	5 cut(s)	32, 53, 102, 618, 1008
HgaI	GACGC	1 cut(s)	67
HhaI	GCGC	1 cut(s)	398
Hin1I	GRCGYC	1 cut(s)	38
Hin6I	GCGC	1 cut(s)	396
HinP1I	GCGC	1 cut(s)	396
HincII	GTYRAC	1 cut(s)	523
HindII	GTYRAC	1 cut(s)	523
HinfI	GANTC	6 cut(s)	310, 370, 693, 1102, 1130, 1202
HpaII	CCGG	5 cut(s)	32, 53, 102, 618, 1008
HphI	GGTGA	1 cut(s)	877
Hpy166II	GTNNAC	2 cut(s)	233, 523
Hpy188I	TCNGA	8 cut(s)	89, 240, 336, 384, 475, 1051, 1300, 1410
Hpy8I	GTNNAC	2 cut(s)	233, 523
Hpy99I	CGWCG	2 cut(s)	40, 61
HpyAV	CCTTC	3 cut(s)	436, 451, 1295
HpyCH4III	ACNGT	4 cut(s)	402, 527, 899, 917
HpyCH4IV	ACGT	1 cut(s)	38
HpyCH4V	TGCA	4 cut(s)	233, 557, 1487, 1514
HpyF10VI	GCNNNNNNNGC	6 cut(s)	32, 53, 395, 594, 927, 1520
HpySE526I	ACGT	1 cut(s)	38
Hsp92I	GRCGYC	1 cut(s)	38
HspAI	GCGC	1 cut(s)	396
KroI	GCCGGC	1 cut(s)	101
KroNI	GCCGGC	1 cut(s)	103
Kzo9I	GATC	7 cut(s)	178, 244, 487, 853, 946, 1016, 1382
LguI	GCTCTTC	1 cut(s)	332
LmnI	GCTCC	5 cut(s)	34, 44, 55, 1305, 1433
Lsp1109I	GCAGC	1 cut(s)	1507
LweI	GCATC	3 cut(s)	205, 286, 1501
MaeI	CTAG	2 cut(s)	681, 1380
MaeII	ACGT	1 cut(s)	38
MaeIII	GTNAC	3 cut(s)	652, 899, 968
MalI	GATC	7 cut(s)	180, 246, 489, 855, 948, 1018, 1384
MbiI	CCGCTC	1 cut(s)	47
MboI	GATC	7 cut(s)	178, 244, 487, 853, 946, 1016, 1382
MboII	GAAGA	9 cut(s)	349, 398, 492, 665, 702, 1004, 1086, 1201, 1388
MflI	RGATCY	4 cut(s)	244, 853, 1016, 1382
MhlI	GDGCHC	3 cut(s)	24, 235, 1310
MlyI	GAGTC	3 cut(s)	319, 702, 1096
MreI	CGCCGGCG	1 cut(s)	101
MroNI	GCCGGC	1 cut(s)	101
MseI	TTAA	4 cut(s)	723, 783, 1056, 1107
MslI	CAYNNNNRTG	3 cut(s)	708, 1124, 1513
MspCI	CTTAAG	1 cut(s)	1106
MspI	CCGG	5 cut(s)	32, 53, 102, 618, 1008
MspR9I	CCNGG	3 cut(s)	619, 1008, 1154
Mva1269I	GAATGC	1 cut(s)	645
MvaI	CCWGG	1 cut(s)	1154
MvnI	CGCG	1 cut(s)	26
MwoI	GCNNNNNNNGC	6 cut(s)	32, 53, 395, 594, 927, 1520
NaeI	GCCGGC	1 cut(s)	103
NciI	CCSGG	2 cut(s)	619, 1008
NdeII	GATC	7 cut(s)	178, 244, 487, 853, 946, 1016, 1382
NgoMIV	GCCGGC	1 cut(s)	101
NlaIV	GGNNCC	3 cut(s)	30, 51, 161
NmuCI	GTSAC	2 cut(s)	652, 968
NspI	RCATGY	2 cut(s)	1518, 1543
PagI	TCATGA	3 cut(s)	313, 709, 1159
PceI	AGGCCT	1 cut(s)	1375
PciI	ACATGT	1 cut(s)	1539
PciSI	GCTCTTC	1 cut(s)	332
PctI	GAATGC	1 cut(s)	645
PdiI	GCCGGC	1 cut(s)	103
PfeI	GAWTC	3 cut(s)	370, 1130, 1202
PkrI	GCNGC	5 cut(s)	11, 28, 49, 954, 1522
PleI	GAGTC	3 cut(s)	318, 701, 1096
PpsI	GAGTC	3 cut(s)	318, 701, 1096
PscI	ACATGT	1 cut(s)	1539
PshBI	ATTAAT	2 cut(s)	723, 783
Psp6I	CCWGG	1 cut(s)	1152
PspGI	CCWGG	1 cut(s)	1152
PspN4I	GGNNCC	3 cut(s)	30, 51, 161
PspPI	GGNCC	5 cut(s)	96, 160, 445, 512, 1136
PsuI	RGATCY	4 cut(s)	244, 853, 1016, 1382
RsaI	GTAC	1 cut(s)	529
RsaNI	GTAC	1 cut(s)	528
RseI	CAYNNNNRTG	3 cut(s)	708, 1124, 1513
Rsr2I	CGGWCCG	1 cut(s)	96
RsrII	CGGWCCG	1 cut(s)	96
SapI	GCTCTTC	1 cut(s)	332
SaqAI	TTAA	4 cut(s)	723, 783, 1056, 1107
SatI	GCNGC	5 cut(s)	10, 27, 48, 953, 1521
Sau3AI	GATC	7 cut(s)	178, 244, 487, 853, 946, 1016, 1382
Sau96I	GGNCC	5 cut(s)	96, 160, 445, 512, 1136
SchI	GAGTC	3 cut(s)	319, 702, 1096
ScrFI	CCNGG	3 cut(s)	619, 1008, 1154
SduI	GDGCHC	3 cut(s)	24, 235, 1310
SfaNI	GCATC	3 cut(s)	205, 286, 1501
SfcI	CTRYAG	1 cut(s)	138
SgrAI	CRCCGGYG	1 cut(s)	101
SinI	GGWCC	4 cut(s)	96, 160, 445, 512
SmiMI	CAYNNNNRTG	3 cut(s)	708, 1124, 1513
SmlI	CTYRAG	1 cut(s)	1106
SmoI	CTYRAG	1 cut(s)	1106
SseBI	AGGCCT	1 cut(s)	1375
SsiI	CCGC	7 cut(s)	9, 12, 26, 47, 99, 952, 1421
SspI	AATATT	1 cut(s)	823
SspMI	CTAG	2 cut(s)	681, 1380
StuI	AGGCCT	1 cut(s)	1375
StyD4I	CCNGG	3 cut(s)	617, 1006, 1152
StyI	CCWWGG	1 cut(s)	219
TaaI	ACNGT	4 cut(s)	402, 527, 899, 917
TaiI	ACGT	1 cut(s)	41
TaqI	TCGA	9 cut(s)	147, 289, 351, 373, 413, 688, 1212, 1249, 1282
TauI	GCSGC	4 cut(s)	12, 29, 50, 955
TfiI	GAWTC	3 cut(s)	370, 1130, 1202
Tru1I	TTAA	4 cut(s)	723, 783, 1056, 1107
Tru9I	TTAA	4 cut(s)	723, 783, 1056, 1107
TscAI	CASTG	4 cut(s)	178, 405, 902, 1033
TseFI	GTSAC	2 cut(s)	652, 968
TseI	GCWGC	1 cut(s)	1520
Tsp45I	GTSAC	2 cut(s)	652, 968
TspDTI	ATGAA	6 cut(s)	17, 330, 494, 1148, 1176, 1209
TspGWI	ACGGA	1 cut(s)	109
TspRI	CASTG	4 cut(s)	178, 405, 902, 1033
Vha464I	CTTAAG	1 cut(s)	1106
VneI	GTGCAC	1 cut(s)	231
VpaK11BI	GGWCC	4 cut(s)	96, 160, 445, 512
VspI	ATTAAT	2 cut(s)	723, 783
XapI	RAATTY	6 cut(s)	143, 434, 537, 881, 1217, 1504
XceI	RCATGY	2 cut(s)	1518, 1543
XcmI	CCANNNNNNNNNTGG	1 cut(s)	170
XspI	CTAG	2 cut(s)	681, 1380
ZraI	GACGTC	1 cut(s)	39

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.