Rmu_sc0000482.1_g000004

phosphatase 2A 55 kDa regulatory subunit B

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000482.1
Physical Location & Seq
Reverse (-)
24987 .. 31057
6071 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000482.1_g000004.1.cds

Sequence Viewer

Length: 1551 bp
atgaacggtggtgatgaggtcgtcgcagcagctccggggggccctccaccggcgcctctcgattggaaattctctcaggtcttcggcgagcgtaccgccggtgaagaagtacaggaagttgacattatttctgctattgaattcgataaaactggtgaccatcttgctactggcgacagagggggccgggtggttctttttgagaggacagatacaaaagatcatggtggctcctccagaagggatttagaaaggatggattattcagtcagtaggcaccctgagttccgttacaaaacagagtttcagagccatgagcctgagtttgactatctgaagagtttggaaatagaggagaaaattaacaaaatcagatggtgccaaacagcaaatggtgccctgtttctcctatctactaatgacaagacaattaaattttggaaggtccaagaaaagaaggtcaggaaagtttctgagatgaatgtggatcctttgaaaactgtagcaaatggcagtgttgctagttcaagcagtttgagtagtcctaaaacgcatcttgcaaatgggggatgccagtctttcagttctcttagcaatgacatttcatttccaccaggggggattccttcgctgcgactgccacaggtaactagccatgagactagcctggtcgctagatgtcgaagagtatatgctcatgctcatgattatcatatcaattcaatttcaaacaacagtgatggtgaaacttttatatcagctgatgatctgcgaataaatctttggaacttggaaattagcaatcaaagtttcaatattgttgatgtgaagcctacaaacatggaagatttaactgaggtgataacatcagcagagttccaccccacccattgcaatacgttagcctatagcagttccaaaggctcaattcgactaattgatttgcggcagtctgctttgtgtgattctcatgctaaattgtttgaggaacaggaggcacctggtgctagatcattcttcacagagattattgcttcaatctcagatattaagtttgcaaaggatggtagatatatacttagccgcgattacatgactcttaagttatgggacatcaatatggattcaggtccagtcacaaccttccaggttcatgaatatttaagacctaggctgtgtgatttatatgagaacgattctatcttcgataaattcgagtgttgtcttagtggtgatggattgcgagtagcaacaggttcttacagcaatctattccgtgtctttggttgtggctctggtagtaatgagacgacaactttggaagcgagtaaaaatccaatgaggcgacaagttcagactccttctagaccttccaggtcgctcagcagtagtataacacgagttgtcagacgaggagcagaaagccccggggttgatgccaatggaaactgttttgatttcacaacaaagttgctgcacttagcatggcatccaactgaaaattcaatagcttgtgctgctgcgaacagcttgtacatgtactatgcgtaa

Protein Analysis

516

Amino Acids

57.44

Weight (kDa)

5.8

Isoelectric Point (pI)

49.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 5 cut(s) 52, 276, 378, 395, 997
AccII CGCG 1 cut(s) 1086
AciI CCGC 3 cut(s) 96, 946, 1084
AclWI GGATC 2 cut(s) 482, 495
AcsI RAATTY 5 cut(s) 68, 140, 434, 1211, 1501
AcuI CTGAAG 1 cut(s) 356
AcyI GRCGYC 1 cut(s) 53
AdeI CACNNNGTG 1 cut(s) 1004
AfaI GTAC 4 cut(s) 94, 111, 1535, 1541
AfiI CCNNNNNNNGG 3 cut(s) 49, 240, 617
AflII CTTAAG 1 cut(s) 1100
AflIII ACRYGT 1 cut(s) 1536
AgsI TTSAA 8 cut(s) 140, 496, 528, 723, 729, 814, 1038, 1506
AjnI CCWGG 5 cut(s) 613, 666, 1000, 1146, 1373
AjuI GAANNNNNNNTTGG 4 cut(s) 766, 798, 1486, 1518
AluBI AGCT 4 cut(s) 32, 761, 1511, 1530
AluI AGCT 4 cut(s) 32, 761, 1511, 1530
Alw26I GTCTC 2 cut(s) 653, 1301
AlwI GGATC 2 cut(s) 482, 495
Ama87I CYCGRG 1 cut(s) 1427
AoxI GGCC 2 cut(s) 40, 184
ApaI GGGCCC 1 cut(s) 44
ApeKI GCWGC 6 cut(s) 26, 29, 631, 1474, 1517, 1520
ApoI RAATTY 5 cut(s) 68, 140, 434, 1211, 1501
ArsI GACNNNNNNTTYG 2 cut(s) 1300, 1332
AspA2I CCTAGG 1 cut(s) 1169
AspLEI GCGC 1 cut(s) 55
AspS9I GGNCC 5 cut(s) 40, 41, 184, 445, 1130
AsuC2I CCSGG 4 cut(s) 36, 188, 1428, 1429
AsuHPI GGTGA 6 cut(s) 23, 113, 167, 755, 871, 1244
AvaI CYCGRG 1 cut(s) 1427
AvaII GGWCC 2 cut(s) 445, 1130
AvrII CCTAGG 1 cut(s) 1169
BaeGI GKGCMC 2 cut(s) 44, 400
BamHI GGATCC 1 cut(s) 487
BanI GGYRCC 5 cut(s) 52, 276, 378, 395, 997
BanII GRGCYC 1 cut(s) 44
BauI CACGAG 1 cut(s) 1398
BbsI GAAGAC 1 cut(s) 73
BbvI GCAGC 6 cut(s) 38, 41, 618, 1461, 1504, 1507
BccI CCATC 6 cut(s) 168, 250, 369, 734, 1058, 1229
BciT130I CCWGG 5 cut(s) 615, 668, 1002, 1148, 1375
BcnI CCSGG 4 cut(s) 36, 188, 1428, 1429
BcoDI GTCTC 2 cut(s) 653, 1301
BfaI CTAG 7 cut(s) 522, 651, 663, 675, 1008, 1170, 1365
BfmI CTRYAG 2 cut(s) 501, 907
BfoI RGCGCY 1 cut(s) 56
BfrI CTTAAG 1 cut(s) 1100
BisI GCNGC 8 cut(s) 27, 30, 632, 947, 1084, 1475, 1518, 1521
BlnI CCTAGG 1 cut(s) 1169
BlpI GCTNAGC 1 cut(s) 1382
BlsI GCNGC 8 cut(s) 28, 31, 633, 948, 1085, 1476, 1519, 1522
Bme1390I CCNGG 9 cut(s) 36, 188, 615, 668, 1002, 1148, 1375, 1428, 1429
Bme18I GGWCC 2 cut(s) 445, 1130
BmeT110I CYCGRG 1 cut(s) 1427
BmgT120I GGNCC 5 cut(s) 40, 41, 184, 445, 1130
BmrFI CCNGG 9 cut(s) 36, 188, 615, 668, 1002, 1148, 1375, 1428, 1429
BmsI GCATC 4 cut(s) 560, 562, 1426, 1498
BpiI GAAGAC 1 cut(s) 73
BpmI CTGGAG 1 cut(s) 220
Bpu1102I GCTNAGC 1 cut(s) 1382
BpuMI CCSGG 4 cut(s) 36, 188, 1428, 1429
BsaHI GRCGYC 1 cut(s) 53
BsaJI CCNNGG 6 cut(s) 35, 614, 1169, 1426, 1427, 1428
Bsc4I CCNNNNNNNGG 3 cut(s) 49, 240, 617
Bse118I RCCGGY 2 cut(s) 49, 98
Bse1I ACTGG 4 cut(s) 157, 175, 574, 1133
Bse3DI GCAATG 2 cut(s) 601, 889
BseBI CCWGG 5 cut(s) 615, 668, 1002, 1148, 1375
BseDI CCNNGG 6 cut(s) 35, 614, 1169, 1426, 1427, 1428
BseGI GGATG 4 cut(s) 261, 575, 1069, 1489
BseLI CCNNNNNNNGG 3 cut(s) 49, 240, 617
BseMI GCAATG 2 cut(s) 601, 889
BseMII CTCAG 7 cut(s) 89, 273, 312, 465, 846, 1056, 1396
BseNI ACTGG 4 cut(s) 157, 175, 574, 1133
BseRI GAGGAG 3 cut(s) 223, 368, 1428
BseSI GKGCMC 2 cut(s) 44, 400
BseXI GCAGC 6 cut(s) 38, 41, 618, 1461, 1504, 1507
BsgI GTGCAG 1 cut(s) 1460
Bsh1236I CGCG 1 cut(s) 1086
BshFI GGCC 2 cut(s) 42, 186
BshNI GGYRCC 5 cut(s) 52, 276, 378, 395, 997
BsiHKCI CYCGRG 1 cut(s) 1427
BsiSI CCGG 5 cut(s) 35, 50, 99, 187, 1428
BslFI GGGAC 1 cut(s) 1124
BslI CCNNNNNNNGG 3 cut(s) 49, 240, 617
BsmAI GTCTC 2 cut(s) 653, 1301
BsmBI CGTCTC 1 cut(s) 1301
BsmFI GGGAC 1 cut(s) 1124
BsnI GGCC 2 cut(s) 42, 186
BsoBI CYCGRG 1 cut(s) 1427
Bsp120I GGGCCC 1 cut(s) 40
Bsp1286I GDGCHC 2 cut(s) 44, 400
Bsp1407I TGTACA 1 cut(s) 1533
Bsp143I GATC 4 cut(s) 220, 487, 766, 1010
Bsp1720I GCTNAGC 1 cut(s) 1382
BspACI CCGC 3 cut(s) 96, 946, 1084
BspANI GGCC 2 cut(s) 42, 186
BspCNI CTCAG 7 cut(s) 88, 274, 313, 466, 847, 1055, 1395
BspFNI CGCG 1 cut(s) 1086
BspHI TCATGA 2 cut(s) 703, 1153
BspPI GGATC 2 cut(s) 482, 495
BspT107I GGYRCC 5 cut(s) 52, 276, 378, 395, 997
BspTI CTTAAG 1 cut(s) 1100
BsrDI GCAATG 2 cut(s) 601, 889
BsrFI RCCGGY 2 cut(s) 49, 98
BsrGI TGTACA 1 cut(s) 1533
BsrI ACTGG 4 cut(s) 157, 175, 574, 1133
BssAI RCCGGY 2 cut(s) 49, 98
BssECI CCNNGG 6 cut(s) 35, 614, 1169, 1426, 1427, 1428
BssMI GATC 4 cut(s) 220, 487, 766, 1010
BssNI GRCGYC 1 cut(s) 53
BssSI CACGAG 1 cut(s) 1398
BssT1I CCWWGG 1 cut(s) 1169
Bst2BI CACGAG 1 cut(s) 1398
Bst2UI CCWGG 5 cut(s) 615, 668, 1002, 1148, 1375
Bst4CI ACNGT 4 cut(s) 8, 502, 737, 1451
Bst6I CTCTTC 2 cut(s) 332, 679
BstACI GRCGYC 1 cut(s) 53
BstAFI CTTAAG 1 cut(s) 1100
BstAPI GCANNNNNTGC 2 cut(s) 395, 1004
BstAUI TGTACA 1 cut(s) 1533
BstC8I GCNNGC 1 cut(s) 89
BstEII GGTNACC 1 cut(s) 155
BstENI CCTNNNNNAGG 1 cut(s) 238
BstF5I GGATG 4 cut(s) 261, 575, 1069, 1489
BstFNI CGCG 1 cut(s) 1086
BstH2I RGCGCY 1 cut(s) 56
BstHHI GCGC 1 cut(s) 55
BstKTI GATC 4 cut(s) 223, 490, 769, 1013
BstMAI GTCTC 2 cut(s) 653, 1301
BstMBI GATC 4 cut(s) 220, 487, 766, 1010
BstMWI GCNNNNNNNGC 4 cut(s) 395, 637, 1004, 1517
BstNI CCWGG 5 cut(s) 615, 668, 1002, 1148, 1375
BstNSI RCATGY 1 cut(s) 1540
BstPI GGTNACC 1 cut(s) 155
BstSCI CCNGG 9 cut(s) 34, 186, 613, 666, 1000, 1146, 1373, 1426, 1427
BstSFI CTRYAG 2 cut(s) 501, 907
BstSLI GKGCMC 2 cut(s) 44, 400
BstUI CGCG 1 cut(s) 1086
BstV1I GCAGC 6 cut(s) 38, 41, 618, 1461, 1504, 1507
BstV2I GAAGAC 1 cut(s) 73
BstX2I RGATCY 1 cut(s) 487
BstYI RGATCY 1 cut(s) 487
BsuRI GGCC 2 cut(s) 42, 186
BtsCI GGATG 4 cut(s) 261, 575, 1069, 1489
BtsI GCAGTG 1 cut(s) 520
BtsIMutI CAGTG 2 cut(s) 520, 742
Cac8I GCNNGC 1 cut(s) 89
CciI TCATGA 2 cut(s) 703, 1153
CfoI GCGC 1 cut(s) 55
Cfr10I RCCGGY 2 cut(s) 49, 98
Cfr13I GGNCC 5 cut(s) 40, 41, 184, 445, 1130
Cfr9I CCCGGG 1 cut(s) 1427
CsiI ACCWGGT 1 cut(s) 1000
Csp6I GTAC 4 cut(s) 93, 110, 1534, 1540
CviQI GTAC 4 cut(s) 93, 110, 1534, 1540
DinI GGCGCC 1 cut(s) 54
DpnI GATC 4 cut(s) 222, 489, 768, 1012
DpnII GATC 4 cut(s) 220, 487, 766, 1010
DraIII CACNNNGTG 1 cut(s) 1004
Eam1104I CTCTTC 2 cut(s) 332, 679
EarI CTCTTC 2 cut(s) 332, 679
Eco130I CCWWGG 1 cut(s) 1169
Eco24I GRGCYC 1 cut(s) 44
Eco47I GGWCC 2 cut(s) 445, 1130
Eco57I CTGAAG 1 cut(s) 356
Eco88I CYCGRG 1 cut(s) 1427
Eco91I GGTNACC 1 cut(s) 155
EcoNI CCTNNNNNAGG 1 cut(s) 238
EcoO109I RGGNCCY 2 cut(s) 40, 41
EcoO65I GGTNACC 1 cut(s) 155
EcoRI GAATTC 1 cut(s) 140
EcoRII CCWGG 5 cut(s) 613, 666, 1000, 1146, 1373
EcoT14I CCWWGG 1 cut(s) 1169
EcoT38I GRGCYC 1 cut(s) 44
EgeI GGCGCC 1 cut(s) 54
EheI GGCGCC 1 cut(s) 54
ErhI CCWWGG 1 cut(s) 1169
Esp3I CGTCTC 1 cut(s) 1301
FaqI GGGAC 1 cut(s) 1124
Fnu4HI GCNGC 8 cut(s) 27, 30, 632, 947, 1084, 1475, 1518, 1521
FokI GGATG 4 cut(s) 268, 582, 1076, 1476
FriOI GRGCYC 1 cut(s) 44
Fsp4HI GCNGC 8 cut(s) 27, 30, 632, 947, 1084, 1475, 1518, 1521
FspBI CTAG 7 cut(s) 522, 651, 663, 675, 1008, 1170, 1365
GlaI GCGC 1 cut(s) 54
GluI GCNGC 8 cut(s) 27, 30, 632, 947, 1084, 1475, 1518, 1521
GsuI CTGGAG 1 cut(s) 220
HaeII RGCGCY 1 cut(s) 56
HaeIII GGCC 2 cut(s) 42, 186
HapII CCGG 5 cut(s) 35, 50, 99, 187, 1428
HhaI GCGC 1 cut(s) 55
Hin1I GRCGYC 1 cut(s) 53
Hin6I GCGC 1 cut(s) 53
HinP1I GCGC 1 cut(s) 53
HincII GTYRAC 1 cut(s) 121
HindII GTYRAC 1 cut(s) 121
HinfI GANTC 6 cut(s) 622, 965, 1096, 1124, 1196, 1357
HpaII CCGG 5 cut(s) 35, 50, 99, 187, 1428
HphI GGTGA 6 cut(s) 23, 113, 167, 755, 871, 1244
Hpy166II GTNNAC 1 cut(s) 121
Hpy188I TCNGA 7 cut(s) 309, 336, 374, 475, 1045, 1356, 1409
Hpy188III TCNNGA 6 cut(s) 59, 237, 463, 704, 1154, 1365
Hpy8I GTNNAC 1 cut(s) 121
Hpy99I CGWCG 1 cut(s) 26
HpyAV CCTTC 7 cut(s) 234, 436, 451, 636, 1153, 1371, 1380
HpyCH4III ACNGT 4 cut(s) 8, 502, 737, 1451
HpyCH4IV ACGT 1 cut(s) 899
HpyCH4V TGCA 4 cut(s) 560, 894, 1058, 1477
HpyF10VI GCNNNNNNNGC 4 cut(s) 395, 637, 1004, 1517
HpySE526I ACGT 1 cut(s) 899
Hsp92I GRCGYC 1 cut(s) 53
HspAI GCGC 1 cut(s) 53
KasI GGCGCC 1 cut(s) 52
Kzo9I GATC 4 cut(s) 220, 487, 766, 1010
LmnI GCTCC 3 cut(s) 37, 236, 1415
Lsp1109I GCAGC 6 cut(s) 38, 41, 618, 1461, 1504, 1507
LweI GCATC 4 cut(s) 560, 562, 1426, 1498
MabI ACCWGGT 1 cut(s) 1000
MaeI CTAG 7 cut(s) 522, 651, 663, 675, 1008, 1170, 1365
MaeII ACGT 1 cut(s) 899
MaeIII GTNAC 4 cut(s) 155, 290, 646, 1135
MalI GATC 4 cut(s) 222, 489, 768, 1012
MboI GATC 4 cut(s) 220, 487, 766, 1010
MboII GAAGA 7 cut(s) 73, 116, 349, 696, 857, 1009, 1195
MflI RGATCY 1 cut(s) 487
MhlI GDGCHC 2 cut(s) 44, 400
Mly113I GGCGCC 1 cut(s) 53
MlyI GAGTC 2 cut(s) 1090, 1351
MmeI TCCRAC 1 cut(s) 1517
MseI TTAA 6 cut(s) 363, 432, 851, 1050, 1101, 1163
MslI CAYNNNNRTG 2 cut(s) 702, 1118
MspA1I CMGCKG 1 cut(s) 761
MspCI CTTAAG 1 cut(s) 1100
MspI CCGG 5 cut(s) 35, 50, 99, 187, 1428
MspR9I CCNGG 9 cut(s) 36, 188, 615, 668, 1002, 1148, 1375, 1428, 1429
MvaI CCWGG 5 cut(s) 615, 668, 1002, 1148, 1375
MvnI CGCG 1 cut(s) 1086
MwoI GCNNNNNNNGC 4 cut(s) 395, 637, 1004, 1517
NarI GGCGCC 1 cut(s) 53
NciI CCSGG 4 cut(s) 36, 188, 1428, 1429
NdeII GATC 4 cut(s) 220, 487, 766, 1010
NmuCI GTSAC 2 cut(s) 155, 1135
NspI RCATGY 1 cut(s) 1540
PagI TCATGA 2 cut(s) 703, 1153
PciI ACATGT 1 cut(s) 1536
PcsI WCGNNNNNNNCGW 1 cut(s) 1212
PfeI GAWTC 4 cut(s) 622, 965, 1124, 1196
PkrI GCNGC 8 cut(s) 28, 31, 633, 948, 1085, 1476, 1519, 1522
PleI GAGTC 2 cut(s) 1090, 1351
PluTI GGCGCC 1 cut(s) 56
PpsI GAGTC 2 cut(s) 1090, 1351
PscI ACATGT 1 cut(s) 1536
Psp6I CCWGG 5 cut(s) 613, 666, 1000, 1146, 1373
PspEI GGTNACC 1 cut(s) 155
PspGI CCWGG 5 cut(s) 613, 666, 1000, 1146, 1373
PspOMI GGGCCC 1 cut(s) 40
PspPI GGNCC 5 cut(s) 40, 41, 184, 445, 1130
PsrI GAACNNNNNNTAC 2 cut(s) 1517, 1549
PsuI RGATCY 1 cut(s) 487
PvuII CAGCTG 1 cut(s) 761
RsaI GTAC 4 cut(s) 94, 111, 1535, 1541
RsaNI GTAC 4 cut(s) 93, 110, 1534, 1540
RseI CAYNNNNRTG 2 cut(s) 702, 1118
SaqAI TTAA 6 cut(s) 363, 432, 851, 1050, 1101, 1163
SatI GCNGC 8 cut(s) 27, 30, 632, 947, 1084, 1475, 1518, 1521
Sau3AI GATC 4 cut(s) 220, 487, 766, 1010
Sau96I GGNCC 5 cut(s) 40, 41, 184, 445, 1130
SchI GAGTC 2 cut(s) 1090, 1351
ScrFI CCNGG 9 cut(s) 36, 188, 615, 668, 1002, 1148, 1375, 1428, 1429
SduI GDGCHC 2 cut(s) 44, 400
SexAI ACCWGGT 1 cut(s) 1000
SfaNI GCATC 4 cut(s) 560, 562, 1426, 1498
SfcI CTRYAG 2 cut(s) 501, 907
SfoI GGCGCC 1 cut(s) 54
SgrAI CRCCGGYG 2 cut(s) 49, 98
SinI GGWCC 2 cut(s) 445, 1130
SmaI CCCGGG 1 cut(s) 1429
SmiMI CAYNNNNRTG 2 cut(s) 702, 1118
SmlI CTYRAG 1 cut(s) 1100
SmoI CTYRAG 1 cut(s) 1100
SsiI CCGC 3 cut(s) 96, 946, 1084
SspDI GGCGCC 1 cut(s) 52
SspI AATATT 2 cut(s) 817, 1160
SspMI CTAG 7 cut(s) 522, 651, 663, 675, 1008, 1170, 1365
StyD4I CCNGG 9 cut(s) 34, 186, 613, 666, 1000, 1146, 1373, 1426, 1427
StyI CCWWGG 1 cut(s) 1169
TaaI ACNGT 4 cut(s) 8, 502, 737, 1451
TaiI ACGT 1 cut(s) 902
TaqI TCGA 6 cut(s) 60, 144, 682, 931, 1206, 1215
TatI WGTACW 3 cut(s) 109, 1533, 1539
TauI GCSGC 2 cut(s) 949, 1086
TfiI GAWTC 4 cut(s) 622, 965, 1124, 1196
Tru1I TTAA 6 cut(s) 363, 432, 851, 1050, 1101, 1163
Tru9I TTAA 6 cut(s) 363, 432, 851, 1050, 1101, 1163
TscAI CASTG 2 cut(s) 520, 742
TseFI GTSAC 2 cut(s) 155, 1135
TseI GCWGC 6 cut(s) 26, 29, 631, 1474, 1517, 1520
Tsp45I GTSAC 2 cut(s) 155, 1135
TspDTI ATGAA 5 cut(s) 17, 494, 594, 1142, 1170
TspGWI ACGGA 2 cut(s) 278, 1265
TspMI CCCGGG 1 cut(s) 1427
TspRI CASTG 2 cut(s) 520, 742
Vha464I CTTAAG 1 cut(s) 1100
VpaK11BI GGWCC 2 cut(s) 445, 1130
XagI CCTNNNNNAGG 1 cut(s) 238
XapI RAATTY 5 cut(s) 68, 140, 434, 1211, 1501
XbaI TCTAGA 1 cut(s) 1364
XceI RCATGY 1 cut(s) 1540
XcmI CCANNNNNNNNNTGG 2 cut(s) 167, 389
XmaI CCCGGG 1 cut(s) 1427
XmaJI CCTAGG 1 cut(s) 1169
XspI CTAG 7 cut(s) 522, 651, 663, 675, 1008, 1170, 1365
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.