Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0001642

Physical Location & Seq

Genomic Coordinates Forward (+)

15717403 .. 15724979

Gene Structure 7577 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g18330.11

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2241 bp

ATGACAAATCTCCACCAAATAACCGAAAAAATATTTGTTTTTCTCATCTTTTTCTCTTCCCACAATCACCTTTTCTCCCTTTTCCCCCAAAGCCCTTATTTACTTTTAAACTCACCTGCTTACAGCACTGCACCTCGTCACCAACCAATTAAATCACACTACTCTCACTACCCTTTTGCTCCCAAGGTCCCACAACCCAACCGAAGTCTCTCAGCCGTCCATCTGTCACTTCACAAGGTGATCTTATCACAAGCCTCCCAAAACAAGAAAAAAAGAAAAGGAAAAAGGAAACTAGAGAAGGCCACAATCGAGAGAACCTACACACAGAGAGAAGTGTGTTTTTTGGTCTCAGAAGCCAAAAGAAGGATTAGCTCTGTAAAAAATTTGAAAACTTTGAGTTTTAAAGATAAGGATAAAATAAATGGTAAAATAAATAATCTTAGGATTTACTTTTTAATCAAATTAATCAGAAAATCCCAATTTTCTCCTTCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGGAGAGAGAAAGAGCGAGGCCTTTTGTTGTTTTTTTCGTTTTGCGGATATGGGTTTTCCACTACTGTATCTGATCTTGTAAACCCAGAAATCGATTCTGCTTGTGTCCGAGAAATGAACGGGGGTGATGAGGTCGTCGCAGCAGCTCCCGGGGTTCCTCCACCGCCTCTGGAATGGAAATTCTCTCAGGTCTTCGGCGAGCGTACGGCCGGTGAAGAAGTTCAGGAAGTTGACATTATTTCTGCTATTGAATTTGATAAAACTGGCGACCATCTTGCTACTGGTGACCGTGGGGGCCGGGTTGTTCTCTTTGAGAGAACAGATTTGAAAGATCATGGTGGCTCCAGAAGGGATTTTGAGAGGATGGATTATTCAGTTAGTAGGCATCCCGAGTTCCGTTACAAAACAGAGTTTCAGAGCCATGAACCTGAGTTTGACTATCTGAAGAGTTTGGAAATAGAGGAGAAAATCAACAAAATCAGATGGTGCCAAACAGCTAATGGTGCCCTGTTTCTCCTATCTACTAATGATAAAACAATTAAGTTTTGGAAGGTCCAAGAAAAGAAGGTCAAGAAAATTTCTGAAATGAATGTGGATCCTTCAAAAGCTGTAGGAAATGGCAGTCTTGCTAGTTCAAGTAATTTGAGTAGCCCTAAAACGTATCTTGCAAATGGAGGAGGCCCAGACAAATCATTCAGTTGTATGAGTAATGACAATTCATTTCCACCAGGAGGCATTCCCTCGTTACGATTGCCGCAGGTAACTAGCCATGAGACTAGCCTAGCTGCTAGATGTCGAAGAGTGTATGCCCATGCTCATGATTATCATATCAATTCAATTTCAAACAACAGTGATGGTGAAACTTTTATATCGGCTGATGATCTGCGATTAAATCTTTGGAACTTGGAAATTAGCAATCAAAGTTTCAATATTGTTGATGTGAAGCCTGCAAACATGGAAGATTTAACCGAGGTGATAACATCAGCAGAGTTCCACCCTACCCATTGCAATACGTTAGCCTACAGCAGTTCCAAAGGCTCCATTCGACTCATTGATTTGCGGCAGTCCGCTTTGTGTGATTCTCATGCTAAATTATTTGAGGAACCGGAGGTGCCTGGTGCTAGATCATTTTTCACGGAGATTATTGCTTCAATCTCGGATATTAAGTTCGGAAAGGAAGGAAGATATATACTTAGCCGAGATTACATGACTCTTAAGTTATGGGACATCAACATGGATTCAGGTCCAGTCCAAACCTTCCAGGTTCATGAATATTTAAGACCTAAGCTGTGTGATTTATATGAGAATGACTCTATCTTCGATAAATTTGAGTGTTGTCTGAGTGGTGATGGGTCGCGAGTGGCAACAGGCTCGTACAGCAATCTATTCCGTGTATTTGGTTCTGCCACTGGTAGTACTGAGGCAACAACCTTAGAAGCCAGCAAAAATCCAATGAGGCGACAAGTTCAGACTCCTTCTCGGCCTTCTAGGTCCCTAAGCAGTAGCATAACACGAGTTGTCAGACGTGGAGCAGAAAGCCCCGGGGTTGATGCAAACGGAAATTGTTATGATTTCACAACAAAGTTGCTGCACTTGGCATGGCATCCTACCGAGAACTCAATAGCCTGTGCTGCTGCTAACAGCTTGTACATGTACTACGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000159 GO:0000278 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008287 GO:0009987 GO:0010921 GO:0016311 GO:0019208 GO:0019220 GO:0019222 GO:0019538 GO:0019888 GO:0030234 GO:0031323 GO:0031399 GO:0032268 GO:0032502 GO:0032991 GO:0035303 GO:0035304 GO:0036211 GO:0043170 GO:0043412 GO:0043666 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051174 GO:0051246 GO:0051336 GO:0060255 GO:0065007 GO:0065009 GO:0070262 GO:0071704 GO:0080090 GO:0098772 GO:1901564 GO:1902494 GO:1903293

KEGG Pathways

Metabolic & Signaling

ko03015 ko04071 ko04111 ko04151 ko04152 ko04261 ko04390 ko04391 ko04530 ko04728 ko05142 ko05160 ko05165 map03015 map04071 map04111 map04151 map04152 map04261 map04390 map04391 map04530 map04728 map05142 map05160 map05165

Pfam Domains

Protein Families

WD40

Protein Analysis

747

Amino Acids

84.86

Weight (kDa)

8.84

Isoelectric Point (pI)

49.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17720 AT1G17720 AT1G51690 AT1G51690 AT1G51690 AT1G51690 AT1G51690
fragaria_vesca	FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_2g32090 FvH4_6g33020 FvH4_6g33020 FvH4_6g33020 FvH4_6g33020
malus_domestica	MD08G1043800.v1.1 MD08G1043900.v1.1 MD08G1044000.v1.1 MD09G1195400.v1.1 MD15G1061300.v1.1 MD17G1176000.v1.1
prunus_persica	Prupe.1G414000_v2.0.a1 Prupe.1G414000_v2.0.a1 Prupe.3G052100_v2.0.a1 Prupe.3G052100_v2.0.a1
pyrus_communis	pycom08g03540 pycom15g05740 pycom17g18330
rosa_chinensis	RchiOBHm_Chr2g0142561 RchiOBHm_Chr6g0310651
rosa_laevigata	RLG00000010469 RLG00000019967
rosa_multiflora	Rmu_co8494963.1_g000001 Rmu_sc0000482.1_g000004 Rmu_sc0007390.1_g000003
rosa_roxburghii	Rroxscaffold_2G00102520 Rroxscaffold_7G00158380
rosa_rugosa	Rorug02G0373900 Rorug02G0374000 Rorug06G0381900 Rorug06G0381900 Rorug06G0381900
rosa_samantha	Rh2BG435300 Rh2DG445300 Rh6BG505400
rosa_wichuraiana	Rw2G034890 Rw6G043120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	124
Acc36I	ACCTGC	2 cut(s)	124, 1324
AccB1I	GGYRCC	3 cut(s)	1062, 1079, 1687
AccII	CGCG	1 cut(s)	1933
AciI	CCGC	5 cut(s)	621, 740, 1331, 1636, 1644
AclWI	GGATC	2 cut(s)	1166, 1179
AcoI	YGGCCR	1 cut(s)	783
AcsI	RAATTY	5 cut(s)	382, 755, 827, 1152, 1901
AcuI	CTGAAG	1 cut(s)	1040
AdeI	CACNNNGTG	1 cut(s)	238
AfaI	GTAC	5 cut(s)	781, 1952, 1993, 2225, 2231
AfiI	CCNNNNNNNGG	2 cut(s)	363, 1307
AflII	CTTAAG	1 cut(s)	1790
AflIII	ACRYGT	1 cut(s)	2226
AgsI	TTSAA	9 cut(s)	388, 827, 904, 1179, 1212, 1413, 1419, 1504, 1728
AjiI	CACGTC	1 cut(s)	2102
AjnI	CCWGG	3 cut(s)	1303, 1690, 1836
AloI	GAACNNNNNNTCC	2 cut(s)	1727, 1759
AluBI	AGCT	7 cut(s)	372, 722, 1073, 1184, 1361, 1864, 2220
AluI	AGCT	7 cut(s)	372, 722, 1073, 1184, 1361, 1864, 2220
Alw26I	GTCTC	3 cut(s)	212, 352, 1343
AlwI	GGATC	2 cut(s)	1166, 1179
Ama87I	CYCGRG	3 cut(s)	725, 965, 2117
AoxI	GGCC	6 cut(s)	300, 595, 783, 871, 1255, 2057
ApeKI	GCWGC	6 cut(s)	716, 719, 1361, 2164, 2207, 2210
ApoI	RAATTY	5 cut(s)	382, 755, 827, 1152, 1901
ArsI	GACNNNNNNTTYG	2 cut(s)	1877, 1909
AseI	ATTAAT	1 cut(s)	464
Asp700I	GAANNNNTTC	1 cut(s)	795
AspS9I	GGNCC	6 cut(s)	187, 871, 1129, 1256, 1820, 2067
AsuC2I	CCSGG	5 cut(s)	726, 727, 875, 2118, 2119
AvaI	CYCGRG	3 cut(s)	725, 965, 2117
AvaII	GGWCC	4 cut(s)	187, 1129, 1820, 2067
BaeGI	GKGCMC	1 cut(s)	1084
BaeI	ACNNNNGTAYC	2 cut(s)	627, 660
BamHI	GGATCC	1 cut(s)	1171
BanI	GGYRCC	3 cut(s)	1062, 1079, 1687
BauI	CACGAG	1 cut(s)	2088
BbsI	GAAGAC	1 cut(s)	760
BbvI	GCAGC	6 cut(s)	728, 731, 1348, 2151, 2194, 2197
BccI	CCATC	6 cut(s)	228, 855, 934, 1053, 1424, 1919
BceAI	ACGGC	2 cut(s)	200, 798
BcgI	CGANNNNNNTGC	4 cut(s)	833, 867, 1929, 1963
BciT130I	CCWGG	3 cut(s)	1305, 1692, 1838
BcnI	CCSGG	5 cut(s)	726, 727, 875, 2118, 2119
BcoDI	GTCTC	3 cut(s)	212, 352, 1343
BfaI	CTAG	9 cut(s)	293, 492, 1206, 1341, 1353, 1358, 1365, 1698, 2064
BfmI	CTRYAG	2 cut(s)	1185, 1597
BfrI	CTTAAG	1 cut(s)	1790
BfuAI	ACCTGC	2 cut(s)	124, 1324
BisI	GCNGC	8 cut(s)	717, 720, 1331, 1362, 1637, 2165, 2208, 2211
BlsI	GCNGC	8 cut(s)	718, 721, 1332, 1363, 1638, 2166, 2209, 2212
BmcAI	AGTACT	1 cut(s)	1993
Bme1390I	CCNGG	8 cut(s)	726, 727, 875, 1305, 1692, 1838, 2118, 2119
Bme18I	GGWCC	4 cut(s)	187, 1129, 1820, 2067
BmeT110I	CYCGRG	3 cut(s)	725, 965, 2117
BmgBI	CACGTC	1 cut(s)	2102
BmgT120I	GGNCC	6 cut(s)	187, 871, 1129, 1256, 1820, 2067
BmrFI	CCNGG	8 cut(s)	726, 727, 875, 1305, 1692, 1838, 2118, 2119
BmsI	GCATC	3 cut(s)	970, 2116, 2188
BpiI	GAAGAC	1 cut(s)	760
BplI	GAGNNNNNCTC	2 cut(s)	1871, 1903
BpmI	CTGGAG	1 cut(s)	904
Bpu10I	CCTNAGC	2 cut(s)	1860, 2072
BpuMI	CCSGG	5 cut(s)	726, 727, 875, 2118, 2119
Bsa29I	ATCGAT	1 cut(s)	669
BsaI	GGTCTC	1 cut(s)	352
BsaJI	CCNNGG	8 cut(s)	183, 725, 726, 865, 1545, 2116, 2117, 2118
BsaWI	WCCGGW	1 cut(s)	1681
BsaXI	ACNNNNNCTCC	2 cut(s)	59, 89
Bsc4I	CCNNNNNNNGG	2 cut(s)	363, 1307
Bse118I	RCCGGY	1 cut(s)	785
Bse1I	ACTGG	4 cut(s)	844, 862, 1823, 1990
Bse3DI	GCAATG	1 cut(s)	1579
BseBI	CCWGG	3 cut(s)	1305, 1692, 1838
BseCI	ATCGAT	1 cut(s)	669
BseDI	CCNNGG	8 cut(s)	183, 725, 726, 865, 1545, 2116, 2117, 2118
BseGI	GGATG	3 cut(s)	945, 961, 2179
BseLI	CCNNNNNNNGG	2 cut(s)	363, 1307
BseMI	GCAATG	1 cut(s)	1579
BseMII	CTCAG	6 cut(s)	225, 363, 776, 996, 1907, 1986
BseNI	ACTGG	4 cut(s)	844, 862, 1823, 1990
BseRI	GAGGAG	3 cut(s)	592, 1052, 1266
BseSI	GKGCMC	1 cut(s)	1084
BseX3I	CGGCCG	1 cut(s)	783
BseXI	GCAGC	6 cut(s)	728, 731, 1348, 2151, 2194, 2197
BsgI	GTGCAG	2 cut(s)	114, 2150
Bsh1236I	CGCG	1 cut(s)	1933
Bsh1285I	CGRYCG	1 cut(s)	786
BshFI	GGCC	6 cut(s)	302, 597, 785, 873, 1257, 2059
BshNI	GGYRCC	3 cut(s)	1062, 1079, 1687
BshVI	ATCGAT	1 cut(s)	669
BsiEI	CGRYCG	1 cut(s)	786
BsiHKCI	CYCGRG	3 cut(s)	725, 965, 2117
BsiSI	CCGG	5 cut(s)	726, 786, 874, 1682, 2118
BsiWI	CGTACG	1 cut(s)	779
BslFI	GGGAC	3 cut(s)	173, 1814, 2053
BslI	CCNNNNNNNGG	2 cut(s)	363, 1307
BsmAI	GTCTC	3 cut(s)	212, 352, 1343
BsmFI	GGGAC	3 cut(s)	173, 1814, 2053
BsmI	GAATGC	1 cut(s)	1311
BsnI	GGCC	6 cut(s)	302, 597, 785, 873, 1257, 2059
Bso31I	GGTCTC	1 cut(s)	352
BsoBI	CYCGRG	3 cut(s)	725, 965, 2117
Bsp1286I	GDGCHC	1 cut(s)	1084
Bsp1407I	TGTACA	1 cut(s)	2223
Bsp143I	GATC	6 cut(s)	240, 649, 907, 1171, 1456, 1700
Bsp68I	TCGCGA	1 cut(s)	1933
BspACI	CCGC	5 cut(s)	621, 740, 1331, 1636, 1644
BspANI	GGCC	6 cut(s)	302, 597, 785, 873, 1257, 2059
BspCNI	CTCAG	6 cut(s)	224, 362, 775, 997, 1908, 1987
BspDI	ATCGAT	1 cut(s)	669
BspFNI	CGCG	1 cut(s)	1933
BspHI	TCATGA	2 cut(s)	1393, 1843
BspMI	ACCTGC	2 cut(s)	124, 1324
BspPI	GGATC	2 cut(s)	1166, 1179
BspT107I	GGYRCC	3 cut(s)	1062, 1079, 1687
BspTI	CTTAAG	1 cut(s)	1790
BspTNI	GGTCTC	1 cut(s)	352
BsrDI	GCAATG	1 cut(s)	1579
BsrFI	RCCGGY	1 cut(s)	785
BsrGI	TGTACA	1 cut(s)	2223
BsrI	ACTGG	4 cut(s)	844, 862, 1823, 1990
BssAI	RCCGGY	1 cut(s)	785
BssECI	CCNNGG	8 cut(s)	183, 725, 726, 865, 1545, 2116, 2117, 2118
BssMI	GATC	6 cut(s)	240, 649, 907, 1171, 1456, 1700
BssSI	CACGAG	1 cut(s)	2088
BssT1I	CCWWGG	1 cut(s)	183
Bst2BI	CACGAG	1 cut(s)	2088
Bst2UI	CCWGG	3 cut(s)	1305, 1692, 1838
Bst4CI	ACNGT	3 cut(s)	643, 866, 1427
Bst6I	CTCTTC	3 cut(s)	61, 1016, 1369
BstAFI	CTTAAG	1 cut(s)	1790
BstAUI	TGTACA	1 cut(s)	2223
BstC8I	GCNNGC	3 cut(s)	776, 1524, 2017
BstDSI	CCRYGG	1 cut(s)	865
BstEII	GGTNACC	1 cut(s)	860
BstF5I	GGATG	3 cut(s)	945, 961, 2179
BstFNI	CGCG	1 cut(s)	1933
BstKTI	GATC	6 cut(s)	243, 652, 910, 1174, 1459, 1703
BstMAI	GTCTC	3 cut(s)	212, 352, 1343
BstMBI	GATC	6 cut(s)	240, 649, 907, 1171, 1456, 1700
BstMCI	CGRYCG	1 cut(s)	786
BstMWI	GCNNNNNNNGC	3 cut(s)	1079, 1953, 2207
BstNI	CCWGG	3 cut(s)	1305, 1692, 1838
BstNSI	RCATGY	1 cut(s)	2230
BstPI	GGTNACC	1 cut(s)	860
BstSCI	CCNGG	8 cut(s)	724, 725, 873, 1303, 1690, 1836, 2116, 2117
BstSFI	CTRYAG	2 cut(s)	1185, 1597
BstSLI	GKGCMC	1 cut(s)	1084
BstUI	CGCG	1 cut(s)	1933
BstV1I	GCAGC	6 cut(s)	728, 731, 1348, 2151, 2194, 2197
BstV2I	GAAGAC	1 cut(s)	760
BstX2I	RGATCY	1 cut(s)	1171
BstYI	RGATCY	1 cut(s)	1171
BstZI	CGGCCG	1 cut(s)	783
Bsu15I	ATCGAT	1 cut(s)	669
BsuRI	GGCC	6 cut(s)	302, 597, 785, 873, 1257, 2059
BsuTUI	ATCGAT	1 cut(s)	669
BtgI	CCRYGG	1 cut(s)	865
BtrI	CACGTC	1 cut(s)	2102
BtsCI	GGATG	3 cut(s)	945, 961, 2179
BtsI	GCAGTG	1 cut(s)	126
BtsIMutI	CAGTG	3 cut(s)	126, 1432, 1983
BtuMI	TCGCGA	1 cut(s)	1933
BveI	ACCTGC	2 cut(s)	124, 1324
Cac8I	GCNNGC	3 cut(s)	776, 1524, 2017
CciI	TCATGA	2 cut(s)	1393, 1843
Cfr10I	RCCGGY	1 cut(s)	785
Cfr13I	GGNCC	6 cut(s)	187, 871, 1129, 1256, 1820, 2067
Cfr9I	CCCGGG	2 cut(s)	725, 2117
ClaI	ATCGAT	1 cut(s)	669
Csp6I	GTAC	5 cut(s)	780, 1951, 1992, 2224, 2230
CviQI	GTAC	5 cut(s)	780, 1951, 1992, 2224, 2230
DpnI	GATC	6 cut(s)	242, 651, 909, 1173, 1458, 1702
DpnII	GATC	6 cut(s)	240, 649, 907, 1171, 1456, 1700
DraI	TTTAAA	2 cut(s)	108, 403
DraIII	CACNNNGTG	1 cut(s)	238
EaeI	YGGCCR	1 cut(s)	783
EagI	CGGCCG	1 cut(s)	783
Eam1104I	CTCTTC	3 cut(s)	61, 1016, 1369
EarI	CTCTTC	3 cut(s)	61, 1016, 1369
EclXI	CGGCCG	1 cut(s)	783
Eco130I	CCWWGG	1 cut(s)	183
Eco147I	AGGCCT	1 cut(s)	597
Eco31I	GGTCTC	1 cut(s)	352
Eco47I	GGWCC	4 cut(s)	187, 1129, 1820, 2067
Eco52I	CGGCCG	1 cut(s)	783
Eco57I	CTGAAG	1 cut(s)	1040
Eco88I	CYCGRG	3 cut(s)	725, 965, 2117
Eco91I	GGTNACC	1 cut(s)	860
EcoO109I	RGGNCCY	2 cut(s)	187, 2067
EcoO65I	GGTNACC	1 cut(s)	860
EcoRII	CCWGG	3 cut(s)	1303, 1690, 1836
EcoT14I	CCWWGG	1 cut(s)	183
ErhI	CCWWGG	1 cut(s)	183
FalI	AAGNNNNNCTT	2 cut(s)	227, 259
FaqI	GGGAC	3 cut(s)	173, 1814, 2053
Fnu4HI	GCNGC	8 cut(s)	717, 720, 1331, 1362, 1637, 2165, 2208, 2211
FokI	GGATG	3 cut(s)	948, 952, 2166
Fsp4HI	GCNGC	8 cut(s)	717, 720, 1331, 1362, 1637, 2165, 2208, 2211
FspBI	CTAG	9 cut(s)	293, 492, 1206, 1341, 1353, 1358, 1365, 1698, 2064
GluI	GCNGC	8 cut(s)	717, 720, 1331, 1362, 1637, 2165, 2208, 2211
GsuI	CTGGAG	1 cut(s)	904
HaeIII	GGCC	6 cut(s)	302, 597, 785, 873, 1257, 2059
HapII	CCGG	5 cut(s)	726, 786, 874, 1682, 2118
HincII	GTYRAC	1 cut(s)	808
HindII	GTYRAC	1 cut(s)	808
HinfI	GANTC	7 cut(s)	671, 1623, 1655, 1786, 1814, 1886, 2047
HpaII	CCGG	5 cut(s)	726, 786, 874, 1682, 2118
Hpy166II	GTNNAC	2 cut(s)	658, 808
Hpy8I	GTNNAC	2 cut(s)	658, 808
Hpy99I	CGWCG	1 cut(s)	716
HpyCH4III	ACNGT	3 cut(s)	643, 866, 1427
HpyCH4IV	ACGT	3 cut(s)	1235, 1589, 2101
HpyCH4V	TGCA	6 cut(s)	131, 1244, 1526, 1584, 2129, 2167
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1079, 1953, 2207
HpySE526I	ACGT	3 cut(s)	1235, 1589, 2101
Kzo9I	GATC	6 cut(s)	240, 649, 907, 1171, 1456, 1700
LmnI	GCTCC	5 cut(s)	184, 727, 923, 1619, 2105
Lsp1109I	GCAGC	6 cut(s)	728, 731, 1348, 2151, 2194, 2197
LweI	GCATC	3 cut(s)	970, 2116, 2188
MaeI	CTAG	9 cut(s)	293, 492, 1206, 1341, 1353, 1358, 1365, 1698, 2064
MaeII	ACGT	3 cut(s)	1235, 1589, 2101
MaeIII	GTNAC	6 cut(s)	137, 225, 860, 974, 1320, 1336
MalI	GATC	6 cut(s)	242, 651, 909, 1173, 1458, 1702
MboI	GATC	6 cut(s)	240, 649, 907, 1171, 1456, 1700
MboII	GAAGA	8 cut(s)	48, 760, 803, 1033, 1386, 1547, 1770, 1885
MflI	RGATCY	1 cut(s)	1171
MhlI	GDGCHC	1 cut(s)	1084
MlyI	GAGTC	4 cut(s)	1617, 1780, 1880, 2041
MroXI	GAANNNNTTC	1 cut(s)	795
MslI	CAYNNNNRTG	2 cut(s)	1392, 1808
MspCI	CTTAAG	1 cut(s)	1790
MspI	CCGG	5 cut(s)	726, 786, 874, 1682, 2118
MspR9I	CCNGG	8 cut(s)	726, 727, 875, 1305, 1692, 1838, 2118, 2119
Mva1269I	GAATGC	1 cut(s)	1311
MvaI	CCWGG	3 cut(s)	1305, 1692, 1838
MvnI	CGCG	1 cut(s)	1933
MwoI	GCNNNNNNNGC	3 cut(s)	1079, 1953, 2207
NciI	CCSGG	5 cut(s)	726, 727, 875, 2118, 2119
NdeII	GATC	6 cut(s)	240, 649, 907, 1171, 1456, 1700
NmeAIII	GCCGAG	2 cut(s)	1799, 2035
NmuCI	GTSAC	3 cut(s)	137, 225, 860
NruI	TCGCGA	1 cut(s)	1933
NspI	RCATGY	1 cut(s)	2230
PagI	TCATGA	2 cut(s)	1393, 1843
PaqCI	CACCTGC	1 cut(s)	124
PceI	AGGCCT	1 cut(s)	597
PciI	ACATGT	1 cut(s)	2226
PctI	GAATGC	1 cut(s)	1311
PdmI	GAANNNNTTC	1 cut(s)	795
PfeI	GAWTC	3 cut(s)	671, 1655, 1814
Pfl23II	CGTACG	1 cut(s)	779
PkrI	GCNGC	8 cut(s)	718, 721, 1332, 1363, 1638, 2166, 2209, 2212
PleI	GAGTC	4 cut(s)	1617, 1780, 1880, 2041
PpsI	GAGTC	4 cut(s)	1617, 1780, 1880, 2041
PpuMI	RGGWCCY	2 cut(s)	187, 2067
PscI	ACATGT	1 cut(s)	2226
PshBI	ATTAAT	1 cut(s)	464
Psp5II	RGGWCCY	2 cut(s)	187, 2067
Psp6I	CCWGG	3 cut(s)	1303, 1690, 1836
PspEI	GGTNACC	1 cut(s)	860
PspGI	CCWGG	3 cut(s)	1303, 1690, 1836
PspLI	CGTACG	1 cut(s)	779
PspPI	GGNCC	6 cut(s)	187, 871, 1129, 1256, 1820, 2067
PspPPI	RGGWCCY	2 cut(s)	187, 2067
PsuI	RGATCY	1 cut(s)	1171
RruI	TCGCGA	1 cut(s)	1933
RsaI	GTAC	5 cut(s)	781, 1952, 1993, 2225, 2231
RsaNI	GTAC	5 cut(s)	780, 1951, 1992, 2224, 2230
RseI	CAYNNNNRTG	2 cut(s)	1392, 1808
SatI	GCNGC	8 cut(s)	717, 720, 1331, 1362, 1637, 2165, 2208, 2211
Sau3AI	GATC	6 cut(s)	240, 649, 907, 1171, 1456, 1700
Sau96I	GGNCC	6 cut(s)	187, 871, 1129, 1256, 1820, 2067
ScaI	AGTACT	1 cut(s)	1993
SchI	GAGTC	4 cut(s)	1617, 1780, 1880, 2041
ScrFI	CCNGG	8 cut(s)	726, 727, 875, 1305, 1692, 1838, 2118, 2119
SduI	GDGCHC	1 cut(s)	1084
SfaNI	GCATC	3 cut(s)	970, 2116, 2188
SfcI	CTRYAG	2 cut(s)	1185, 1597
SinI	GGWCC	4 cut(s)	187, 1129, 1820, 2067
SmaI	CCCGGG	2 cut(s)	727, 2119
SmiMI	CAYNNNNRTG	2 cut(s)	1392, 1808
SmlI	CTYRAG	1 cut(s)	1790
SmoI	CTYRAG	1 cut(s)	1790
SseBI	AGGCCT	1 cut(s)	597
SsiI	CCGC	5 cut(s)	621, 740, 1331, 1636, 1644
SspI	AATATT	3 cut(s)	33, 1507, 1850
SspMI	CTAG	9 cut(s)	293, 492, 1206, 1341, 1353, 1358, 1365, 1698, 2064
StuI	AGGCCT	1 cut(s)	597
StyD4I	CCNGG	8 cut(s)	724, 725, 873, 1303, 1690, 1836, 2116, 2117
StyI	CCWWGG	1 cut(s)	183
TaaI	ACNGT	3 cut(s)	643, 866, 1427
TaiI	ACGT	3 cut(s)	1238, 1592, 2104
TaqI	TCGA	5 cut(s)	309, 669, 1372, 1621, 1896
TatI	WGTACW	3 cut(s)	1991, 2223, 2229
TauI	GCSGC	2 cut(s)	1333, 1639
TfiI	GAWTC	3 cut(s)	671, 1655, 1814
TscAI	CASTG	3 cut(s)	133, 1432, 1990
TseFI	GTSAC	3 cut(s)	137, 225, 860
TseI	GCWGC	6 cut(s)	716, 719, 1361, 2164, 2207, 2210
Tsp45I	GTSAC	3 cut(s)	137, 225, 860
TspDTI	ATGAA	6 cut(s)	707, 1014, 1178, 1284, 1832, 1860
TspGWI	ACGGA	4 cut(s)	962, 1727, 1955, 2148
TspMI	CCCGGG	2 cut(s)	725, 2117
TspRI	CASTG	3 cut(s)	133, 1432, 1990
Vha464I	CTTAAG	1 cut(s)	1790
VpaK11BI	GGWCC	4 cut(s)	187, 1129, 1820, 2067
VspI	ATTAAT	1 cut(s)	464
XapI	RAATTY	5 cut(s)	382, 755, 827, 1152, 1901
XbaI	TCTAGA	1 cut(s)	491
XceI	RCATGY	1 cut(s)	2230
XcmI	CCANNNNNNNNNTGG	2 cut(s)	854, 1073
XmaI	CCCGGG	2 cut(s)	725, 2117
XmnI	GAANNNNTTC	1 cut(s)	795
XspI	CTAG	9 cut(s)	293, 492, 1206, 1341, 1353, 1358, 1365, 1698, 2064
ZrmI	AGTACT	1 cut(s)	1993

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.