Prupe.1G414000_v2.0.a1

phosphatase 2A 55 kDa regulatory subunit B

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
36047703 .. 36053839
6137 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G414000.2

Sequence Viewer

Length: 1551 bp
ATGAACGTCGGCGGGGAGGGGCTCTTGGCTCCGGCGAGGTCGGCGGCGGATTTATCGCCGCTGGAGTGGAAGTTTTCGCAGGTCTTCGGAGAAAGGACCGCCGGAGAAGAAGTTCAGGAAGTTGATATAATATCCGCTATTGAATTCGATAGAACTGGGGACCACCTTGCCACTGGAGATCGTGGAGGTCGGGTGGTATTGTTTGAAAGAACTGATACGAAAGATCATGGTGGACATCGGAGAGATCTAGAGAGGATGGATTATTCAATCAGTAGGCATCCCGAGTTTCGCTATAAAACTGAGTTCCAGAGTCATGAACCTGAGTTTGACTATCTTAAGAGCTTGGAAATTGAGGAAAAAATCAACAAGATCAGATGGTGTCAGACAGCTAATGGTGCGCTGTTTCTTCTCTCCACTAATGACAAAACCATCAAATTCTGGAAGATCCAAGAAAAGAAGGTAAAGAAAGTATGTGAGATGAATGTAGATGCTTCTAAATCTGTGGAAAATGGGGCAGTTGGTTCTCTGTCAGCAAGCTCCAAACCGTCTCTTGCAAATGGAGTATGTAAAGAGAGACCCATCAGTTCTCCAAGCAATGACAATTCGATTCCATCTGGGGGTTTGCCATCTCTGCACTTGCCCGTGGTAGTGACCAGTCATGAGACGAGCCTTATGGCCAGATGTCGAAGAGTCTACGCCCATGCCCATGACTATCATATTAATTCCATTTCAAATAACAGCGATGGAGAAACTTTTATATCAGCTGATGACTTGCGAATTAATCTTTGGAACTTAGAGATTAGCAATCAAAGTTTTAATATTGTTGACGTGAAGCCTACAAACATGGAGGATCTAACTGAGGTGATAACTTCAGCAGAATTTCATCCTACTCATTGTAACATGCTGGCGTACAGTAGCTCAAGGGGCTCAATTCGTCTTATTGATTTGCGGCAGTCAGCTTTATGTGACACTCACAGCAAATTGTTTGAAGAACGAGAAGTGCCTGGTTCAAGATCTTTTTTCACTGAGATAATAGCCTCAATTTCAGATATTAAGTTTGCTAAGAATGGAAGACAAGTACTTAGTCGTGATTACATGACTCTTAAGCTGTGGGACATAAACATGGATTCTGGCCCAGTTGCAACTTTCCAGGTTCATGAATATCTAAGACCTAAGCTGTGCGATTTGTATGAAAATGATTCTATCTTCGATAAATTTGAGTGCTGTTTAAGTGGAGATGGGCATCGAGTGGCAACAGGTTCTTACAGCAATCAGTTTCGAGTGTTTGGTTGTTCTGAAGGGAGCACAGAAGCGACGACATTGGAGGCCAGCAAAAACCCCATGAGGAGACAAGTGCAAACGCCATCAAGGCCTTCTAGATCTTTGGGCAACCTTCCTCGTGTTCTCAGGCGAGGTGCGGATAACTCTGGAGCTGATGCGAACGGAAATTCTTTTGATTTCACGACGAAGTTGCTACATCTTGCATGGCATCCTACTGAGAATTCACTCGCCTGTGCTGCTTCAAATAGCCTTTACATGTATTATGCGTAA

Protein Analysis

517

Amino Acids

57.73

Weight (kDa)

5.97

Isoelectric Point (pI)

44.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 70
AccI GTMKAC 1 cut(s) 693
AciI CCGC 8 cut(s) 12, 44, 47, 59, 99, 135, 949, 1418
AclWI GGATC 2 cut(s) 439, 858
AcoI YGGCCR 1 cut(s) 675
AcsI RAATTY 6 cut(s) 143, 434, 878, 1214, 1447, 1501
AcuI CTGAAG 2 cut(s) 855, 1317
AfaI GTAC 2 cut(s) 911, 1080
AfiI CCNNNNNNNGG 1 cut(s) 617
AflII CTTAAG 2 cut(s) 335, 1103
AflIII ACRYGT 1 cut(s) 1536
AgsI TTSAA 7 cut(s) 143, 206, 267, 732, 989, 1011, 1524
AjiI CACGTC 1 cut(s) 829
AjnI CCWGG 2 cut(s) 1003, 1149
AjuI GAANNNNNNNTTGG 2 cut(s) 769, 801
AloI GAACNNNNNNTCC 2 cut(s) 96, 128
AluBI AGCT 9 cut(s) 342, 389, 537, 764, 918, 959, 1108, 1177, 1433
AluI AGCT 9 cut(s) 342, 389, 537, 764, 918, 959, 1108, 1177, 1433
Alw21I GWGCWC 1 cut(s) 1307
Alw26I GTCTC 4 cut(s) 552, 568, 656, 1342
AlwI GGATC 2 cut(s) 439, 858
Ama87I CYCGRG 1 cut(s) 281
AoxI GGCC 4 cut(s) 675, 1132, 1326, 1370
ApeKI GCWGC 1 cut(s) 1517
ApoI RAATTY 6 cut(s) 143, 434, 878, 1214, 1447, 1501
AseI ATTAAT 2 cut(s) 720, 780
Asp700I GAANNNNTTC 1 cut(s) 111
AspLEI GCGC 1 cut(s) 400
AspS9I GGNCC 3 cut(s) 96, 160, 1133
AsuHPI GGTGA 1 cut(s) 874
AvaI CYCGRG 1 cut(s) 281
AvaII GGWCC 2 cut(s) 96, 160
BalI TGGCCA 1 cut(s) 677
BanII GRGCYC 2 cut(s) 24, 929
BauI CACGAG 1 cut(s) 1398
BbsI GAAGAC 2 cut(s) 76, 1078
Bbv12I GWGCWC 1 cut(s) 1307
BbvI GCAGC 1 cut(s) 1504
BccI CCATC 9 cut(s) 250, 369, 437, 587, 619, 634, 737, 1232, 1372
BcgI CGANNNNNNTGC 2 cut(s) 1453, 1487
BciT130I CCWGG 2 cut(s) 1005, 1151
BcoDI GTCTC 4 cut(s) 552, 568, 656, 1342
BfaI CTAG 2 cut(s) 248, 1377
BfrI CTTAAG 2 cut(s) 335, 1103
BfuAI ACCTGC 1 cut(s) 70
BglI GCCNNNNNGGC 1 cut(s) 1369
BglII AGATCT 3 cut(s) 244, 1013, 1379
BisI GCNGC 4 cut(s) 45, 59, 950, 1518
BlsI GCNGC 4 cut(s) 46, 60, 951, 1519
BmcAI AGTACT 1 cut(s) 1080
Bme1390I CCNGG 2 cut(s) 1005, 1151
Bme18I GGWCC 2 cut(s) 96, 160
BmeT110I CYCGRG 1 cut(s) 281
BmgBI CACGTC 1 cut(s) 829
BmgT120I GGNCC 3 cut(s) 96, 160, 1133
BmiI GGNNCC 2 cut(s) 30, 161
BmrFI CCNGG 2 cut(s) 1005, 1151
BmrI ACTGGG 2 cut(s) 165, 1130
BmsI GCATC 5 cut(s) 286, 478, 1252, 1426, 1498
BmuI ACTGGG 2 cut(s) 165, 1130
BpiI GAAGAC 2 cut(s) 76, 1078
BpmI CTGGAG 3 cut(s) 83, 195, 1449
Bpu10I CCTNAGC 1 cut(s) 1173
BpuEI CTTGAG 1 cut(s) 904
BsaBI GATNNNNATC 1 cut(s) 1242
BsaI GGTCTC 1 cut(s) 568
BsaJI CCNNGG 1 cut(s) 642
BsaXI ACNNNNNCTCC 6 cut(s) 56, 86, 96, 126, 177, 207
Bsc4I CCNNNNNNNGG 1 cut(s) 617
Bse1I ACTGG 4 cut(s) 160, 178, 654, 1136
Bse3DI GCAATG 1 cut(s) 601
Bse8I GATNNNNATC 1 cut(s) 1242
BseBI CCWGG 2 cut(s) 1005, 1151
BseDI CCNNGG 1 cut(s) 642
BseGI GGATG 4 cut(s) 261, 277, 883, 1489
BseJI GATNNNNATC 1 cut(s) 1242
BseLI CCNNNNNNNGG 1 cut(s) 617
BseMI GCAATG 1 cut(s) 601
BseMII CTCAG 6 cut(s) 291, 312, 849, 1017, 1420, 1488
BseNI ACTGG 4 cut(s) 160, 178, 654, 1136
BseRI GAGGAG 1 cut(s) 1360
BseXI GCAGC 1 cut(s) 1504
BsgI GTGCAG 1 cut(s) 617
BshFI GGCC 4 cut(s) 677, 1134, 1328, 1372
BsiHKAI GWGCWC 1 cut(s) 1307
BsiHKCI CYCGRG 1 cut(s) 281
BsiSI CCGG 2 cut(s) 32, 102
BslFI GGGAC 2 cut(s) 173, 1127
BslI CCNNNNNNNGG 1 cut(s) 617
BsmAI GTCTC 4 cut(s) 552, 568, 656, 1342
BsmBI CGTCTC 2 cut(s) 552, 656
BsmFI GGGAC 2 cut(s) 173, 1127
BsnI GGCC 4 cut(s) 677, 1134, 1328, 1372
Bso31I GGTCTC 1 cut(s) 568
BsoBI CYCGRG 1 cut(s) 281
Bsp1286I GDGCHC 3 cut(s) 24, 929, 1307
Bsp143I GATC 8 cut(s) 178, 223, 244, 369, 444, 850, 1013, 1379
BspACI CCGC 8 cut(s) 12, 44, 47, 59, 99, 135, 949, 1418
BspANI GGCC 4 cut(s) 677, 1134, 1328, 1372
BspCNI CTCAG 6 cut(s) 292, 313, 850, 1018, 1419, 1489
BspHI TCATGA 3 cut(s) 313, 658, 1156
BspLI GGNNCC 2 cut(s) 30, 161
BspMI ACCTGC 1 cut(s) 70
BspPI GGATC 2 cut(s) 439, 858
BspTI CTTAAG 2 cut(s) 335, 1103
BspTNI GGTCTC 1 cut(s) 568
BsrDI GCAATG 1 cut(s) 601
BsrI ACTGG 4 cut(s) 160, 178, 654, 1136
BssECI CCNNGG 1 cut(s) 642
BssMI GATC 8 cut(s) 178, 223, 244, 369, 444, 850, 1013, 1379
BssSI CACGAG 1 cut(s) 1398
Bst2BI CACGAG 1 cut(s) 1398
Bst2UI CCWGG 2 cut(s) 1005, 1151
Bst4CI ACNGT 2 cut(s) 546, 914
Bst6I CTCTTC 1 cut(s) 682
BstAFI CTTAAG 2 cut(s) 335, 1103
BstC8I GCNNGC 3 cut(s) 535, 906, 1330
BstDSI CCRYGG 1 cut(s) 642
BstF5I GGATG 4 cut(s) 261, 277, 883, 1489
BstHHI GCGC 1 cut(s) 400
BstKTI GATC 8 cut(s) 181, 226, 247, 372, 447, 853, 1016, 1382
BstMAI GTCTC 4 cut(s) 552, 568, 656, 1342
BstMBI GATC 8 cut(s) 178, 223, 244, 369, 444, 850, 1013, 1379
BstMWI GCNNNNNNNGC 6 cut(s) 41, 395, 631, 924, 1369, 1517
BstNI CCWGG 2 cut(s) 1005, 1151
BstNSI RCATGY 2 cut(s) 904, 1540
BstSCI CCNGG 2 cut(s) 1003, 1149
BstV1I GCAGC 1 cut(s) 1504
BstV2I GAAGAC 2 cut(s) 76, 1078
BstX2I RGATCY 5 cut(s) 244, 444, 850, 1013, 1379
BstYI RGATCY 5 cut(s) 244, 444, 850, 1013, 1379
BsuRI GGCC 4 cut(s) 677, 1134, 1328, 1372
BtgI CCRYGG 1 cut(s) 642
BtgZI GCGATG 1 cut(s) 756
BtrI CACGTC 1 cut(s) 829
BtsCI GGATG 4 cut(s) 261, 277, 883, 1489
BtsIMutI CAGTG 2 cut(s) 171, 1023
BveI ACCTGC 1 cut(s) 70
Cac8I GCNNGC 3 cut(s) 535, 906, 1330
CciI TCATGA 3 cut(s) 313, 658, 1156
CfoI GCGC 1 cut(s) 400
Cfr13I GGNCC 3 cut(s) 96, 160, 1133
Csp6I GTAC 2 cut(s) 910, 1079
CviQI GTAC 2 cut(s) 910, 1079
DpnI GATC 8 cut(s) 180, 225, 246, 371, 446, 852, 1015, 1381
DpnII GATC 8 cut(s) 178, 223, 244, 369, 444, 850, 1013, 1379
EaeI YGGCCR 1 cut(s) 675
Eam1104I CTCTTC 1 cut(s) 682
EarI CTCTTC 1 cut(s) 682
EciI GGCGGA 1 cut(s) 62
Eco147I AGGCCT 1 cut(s) 1372
Eco24I GRGCYC 2 cut(s) 24, 929
Eco31I GGTCTC 1 cut(s) 568
Eco47I GGWCC 2 cut(s) 96, 160
Eco57I CTGAAG 2 cut(s) 855, 1317
Eco88I CYCGRG 1 cut(s) 281
EcoRI GAATTC 2 cut(s) 143, 1501
EcoRII CCWGG 2 cut(s) 1003, 1149
EcoT38I GRGCYC 2 cut(s) 24, 929
Esp3I CGTCTC 2 cut(s) 552, 656
FaqI GGGAC 2 cut(s) 173, 1127
FauI CCCGC 1 cut(s) 5
FblI GTMKAC 1 cut(s) 693
Fnu4HI GCNGC 4 cut(s) 45, 59, 950, 1518
FokI GGATG 4 cut(s) 264, 268, 870, 1476
FriOI GRGCYC 2 cut(s) 24, 929
Fsp4HI GCNGC 4 cut(s) 45, 59, 950, 1518
FspBI CTAG 2 cut(s) 248, 1377
GlaI GCGC 1 cut(s) 399
GluI GCNGC 4 cut(s) 45, 59, 950, 1518
GsuI CTGGAG 3 cut(s) 83, 195, 1449
HaeIII GGCC 4 cut(s) 677, 1134, 1328, 1372
HapII CCGG 2 cut(s) 32, 102
HhaI GCGC 1 cut(s) 400
Hin6I GCGC 1 cut(s) 398
HinP1I GCGC 1 cut(s) 398
HincII GTYRAC 1 cut(s) 826
HindII GTYRAC 1 cut(s) 826
HinfI GANTC 6 cut(s) 310, 607, 690, 1099, 1127, 1199
HpaII CCGG 2 cut(s) 32, 102
HphI GGTGA 1 cut(s) 874
Hpy166II GTNNAC 3 cut(s) 233, 694, 826
Hpy188I TCNGA 6 cut(s) 89, 240, 374, 384, 1048, 1297
Hpy8I GTNNAC 3 cut(s) 233, 694, 826
Hpy99I CGWCG 3 cut(s) 11, 1318, 1468
HpyAV CCTTC 4 cut(s) 451, 1292, 1383, 1403
HpyCH4III ACNGT 2 cut(s) 546, 914
HpyCH4IV ACGT 2 cut(s) 6, 828
HpyCH4V TGCA 5 cut(s) 554, 634, 1142, 1357, 1484
HpyF10VI GCNNNNNNNGC 6 cut(s) 41, 395, 631, 924, 1369, 1517
HpySE526I ACGT 2 cut(s) 6, 828
HspAI GCGC 1 cut(s) 398
Kzo9I GATC 8 cut(s) 178, 223, 244, 369, 444, 850, 1013, 1379
LmnI GCTCC 4 cut(s) 34, 542, 1302, 1430
Lsp1109I GCAGC 1 cut(s) 1504
LweI GCATC 5 cut(s) 286, 478, 1252, 1426, 1498
MaeI CTAG 2 cut(s) 248, 1377
MaeII ACGT 2 cut(s) 6, 828
MaeIII GTNAC 3 cut(s) 649, 896, 965
MalI GATC 8 cut(s) 180, 225, 246, 371, 446, 852, 1015, 1381
MboI GATC 8 cut(s) 178, 223, 244, 369, 444, 850, 1013, 1379
MboII GAAGA 8 cut(s) 76, 119, 398, 454, 699, 1001, 1083, 1198
MflI RGATCY 5 cut(s) 244, 444, 850, 1013, 1379
MhlI GDGCHC 3 cut(s) 24, 929, 1307
MlsI TGGCCA 1 cut(s) 677
MluNI TGGCCA 1 cut(s) 677
MlyI GAGTC 3 cut(s) 319, 699, 1093
Mox20I TGGCCA 1 cut(s) 677
MroXI GAANNNNTTC 1 cut(s) 111
MscI TGGCCA 1 cut(s) 677
MseI TTAA 7 cut(s) 336, 720, 780, 816, 1053, 1104, 1229
MslI CAYNNNNRTG 2 cut(s) 705, 1121
Msp20I TGGCCA 1 cut(s) 677
MspA1I CMGCKG 2 cut(s) 61, 764
MspCI CTTAAG 2 cut(s) 335, 1103
MspI CCGG 2 cut(s) 32, 102
MspR9I CCNGG 2 cut(s) 1005, 1151
MvaI CCWGG 2 cut(s) 1005, 1151
MwoI GCNNNNNNNGC 6 cut(s) 41, 395, 631, 924, 1369, 1517
NdeII GATC 8 cut(s) 178, 223, 244, 369, 444, 850, 1013, 1379
NlaIV GGNNCC 2 cut(s) 30, 161
NmuCI GTSAC 2 cut(s) 649, 965
NspI RCATGY 2 cut(s) 904, 1540
PagI TCATGA 3 cut(s) 313, 658, 1156
PceI AGGCCT 1 cut(s) 1372
PciI ACATGT 1 cut(s) 1536
PdmI GAANNNNTTC 1 cut(s) 111
PfeI GAWTC 3 cut(s) 607, 1127, 1199
PkrI GCNGC 4 cut(s) 46, 60, 951, 1519
PleI GAGTC 3 cut(s) 318, 698, 1093
PpsI GAGTC 3 cut(s) 318, 698, 1093
PscI ACATGT 1 cut(s) 1536
PshBI ATTAAT 2 cut(s) 720, 780
Psp6I CCWGG 2 cut(s) 1003, 1149
PspGI CCWGG 2 cut(s) 1003, 1149
PspN4I GGNNCC 2 cut(s) 30, 161
PspPI GGNCC 3 cut(s) 96, 160, 1133
PsuI RGATCY 5 cut(s) 244, 444, 850, 1013, 1379
PvuII CAGCTG 1 cut(s) 764
RsaI GTAC 2 cut(s) 911, 1080
RsaNI GTAC 2 cut(s) 910, 1079
RseI CAYNNNNRTG 2 cut(s) 705, 1121
SaqAI TTAA 7 cut(s) 336, 720, 780, 816, 1053, 1104, 1229
SatI GCNGC 4 cut(s) 45, 59, 950, 1518
Sau3AI GATC 8 cut(s) 178, 223, 244, 369, 444, 850, 1013, 1379
Sau96I GGNCC 3 cut(s) 96, 160, 1133
ScaI AGTACT 1 cut(s) 1080
SchI GAGTC 3 cut(s) 319, 699, 1093
ScrFI CCNGG 2 cut(s) 1005, 1151
SduI GDGCHC 3 cut(s) 24, 929, 1307
SfaNI GCATC 5 cut(s) 286, 478, 1252, 1426, 1498
SinI GGWCC 2 cut(s) 96, 160
SmiMI CAYNNNNRTG 2 cut(s) 705, 1121
SmlI CTYRAG 3 cut(s) 335, 919, 1103
SmoI CTYRAG 3 cut(s) 335, 919, 1103
SseBI AGGCCT 1 cut(s) 1372
SsiI CCGC 8 cut(s) 12, 44, 47, 59, 99, 135, 949, 1418
SspI AATATT 1 cut(s) 820
SspMI CTAG 2 cut(s) 248, 1377
StuI AGGCCT 1 cut(s) 1372
StyD4I CCNGG 2 cut(s) 1003, 1149
TaaI ACNGT 2 cut(s) 546, 914
TaiI ACGT 2 cut(s) 9, 831
TaqI TCGA 6 cut(s) 147, 605, 685, 1209, 1246, 1279
TatI WGTACW 1 cut(s) 1078
TauI GCSGC 3 cut(s) 47, 61, 952
TfiI GAWTC 3 cut(s) 607, 1127, 1199
Tru1I TTAA 7 cut(s) 336, 720, 780, 816, 1053, 1104, 1229
Tru9I TTAA 7 cut(s) 336, 720, 780, 816, 1053, 1104, 1229
TscAI CASTG 2 cut(s) 178, 1030
TseFI GTSAC 2 cut(s) 649, 965
TseI GCWGC 1 cut(s) 1517
Tsp45I GTSAC 2 cut(s) 649, 965
TspDTI ATGAA 7 cut(s) 17, 330, 494, 872, 1145, 1173, 1206
TspGWI ACGGA 1 cut(s) 1458
TspRI CASTG 2 cut(s) 178, 1030
Vha464I CTTAAG 2 cut(s) 335, 1103
VpaK11BI GGWCC 2 cut(s) 96, 160
VspI ATTAAT 2 cut(s) 720, 780
XapI RAATTY 6 cut(s) 143, 434, 878, 1214, 1447, 1501
XbaI TCTAGA 2 cut(s) 247, 1376
XceI RCATGY 2 cut(s) 904, 1540
XcmI CCANNNNNNNNNTGG 1 cut(s) 170
XmiI GTMKAC 1 cut(s) 693
XmnI GAANNNNTTC 1 cut(s) 111
XspI CTAG 2 cut(s) 248, 1377
ZrmI AGTACT 1 cut(s) 1080
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.